ID:

dvi_8449

 Coordinate:

scaffold_12928:1371892-1371954 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-9.9 -9.8 -9.8

Flybase annnotation

exon [dvir_GLEANR_17144:25]; CDS [Dvir\GJ16640-cds]; exon [dvir_GLEANR_17144:26]; CDS [Dvir\GJ16640-cds]; intron [Dvir\GJ16640-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------##################################################
TGGGTGGATCCATGTCCCTGCACTGCAACGGTCGCATGAAGTGGAATAATGTAAGTGCATGGAAATGATGTATTGATTGATCGCTTTTGATTGTCTTGTGCTTTATGCTGCAGGATCCGGTCTTTGTCAGCTGGTACAAGCAGAACAGCCGACTGCCGAACAC
**************************************************.....((((.....((((.((((.(((.((((......)))))))..)))).))))..)))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M061
embryo
 M047
female body
 SRR060655
9x160_testes_total
 SRR060675
140x9_ovaries_total
 GSM1528803
follicle cells		 SRR060657
140_testes_total
 SRR060664
9_males_carcasses_total
 SRR060670
9_testes_total
 SRR060676
9xArg_ovaries_total
 SRR060677
Argx9_ovaries_total
 SRR060684
140x9_0-2h_embryos_total
 SRR1106730
embryo_16-30h
 V047
embryo
 V116
male body		 SRR060682
9x140_0-2h_embryos_total
 SRR1106729
mixed whole adult body
..................................................GTAAGTGCATGGAAATGATGTATTGAT...................................................................................... 27 0 1 2.00 2 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0
.......................TGCAACGGTCGCATGAAGTGGA...................................................................................................................... 22 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................GATCCGGTCTTTGTCAGCTGGTACAAGC...................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................CGCATGAAGTGGAATAATG................................................................................................................ 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................AACGGTCGCATGAAGTGGA...................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...................GCACTGCAACGGTCGCATGAAGTGGA...................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..................................................................................................................ATCCGGTCTTTGTCAGCTGGT............................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.............................GGTCGCATGAAGTCGAATAATGAT.............................................................................................................. 24 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................GCTGGTACAAGCAGAACAGCCGACT......... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................AGAACAGCCGACTGCCGAAC.. 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
................................CGCATGAAGTGGAATAAT................................................................................................................. 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................ACGGTCGCATGAAGTGGAATA................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.................................................................................................GTGCTTTATGCTGCAGGATCC............................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....GGATCCATGTCCCTGCACTGCAACGGTC.................................................................................................................................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........CATGTCCCTGCACTGCAACGGTCGC................................................................................................................................ 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...................GCACTGCAACGGTCGCATGAAGTGG....................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............TGTCCCTGCACTGCAACGGTCGCA............................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.....................................................................................................................................GTACAAGCAGAACAGCCGACTGCC...... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................GTACAAGCAGAACAGCCGACT......... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................TTGTACAAGCAGAACAGCCGA........... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....GGATCCATGTCCCTGCACTGC......................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................CGCATGAAGCGGACTAAT................................................................................................................. 18 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.................................GCATGAAGTGGAATAATGATC............................................................................................................. 21 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................CTTATGCTGCAGGAGCCGTT.......................................... 20 3 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.................................GCATGAAGCGGACTAAT................................................................................................................. 17 2 15 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

ACCCACCTAGGTACAGGGACGTGACGTTGCCAGCGTACTTCACCTTATTACATTCACGTACCTTTACTACATAACTAACTAGCGAAAACTAACAGAACACGAAATACGACGTCCTAGGCCAGAAACAGTCGACCATGTTCGTCTTGTCGGCTGACGGCTTGTG
**************************************************.....((((.....((((.((((.(((.((((......)))))))..)))).))))..)))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total V047
embryo
 V116
male body		 SRR060667
160_females_carcasses_total
 GSM1528803
follicle cells		 M027
male body		 SRR1106713
embryo_0-2h
 SRR1106718
embryo_6-8h
 V053
head
....ACCTAGGTACAGGGGCTTC............................................................................................................................................ 19 3 3 0.33 1 0 1 0 0 0 0 0 0
.........................GTTGCCAGCATACTTGGCCT...................................................................................................................... 20 3 3 0.33 1 1 0 0 0 0 0 0 0
..................ACGTGTCGTGGCCAGCATAC............................................................................................................................. 20 3 9 0.11 1 0 0 1 0 0 0 0 0
...............................................................................................................................ATCCACCATGTTCGTC.................... 16 2 20 0.10 2 0 0 0 0 0 1 1 0
.........................................................................................................................................TTCGTCTTGTCTCCTGAC........ 18 2 17 0.06 1 0 0 0 1 0 0 0 0
......................................................................ATAAGGAACTAGCCAAAACT......................................................................... 20 3 18 0.06 1 0 0 1 0 0 0 0 0
...................CGTGTCGTGGCCAGCATAC............................................................................................................................. 19 3 19 0.05 1 0 0 0 0 1 0 0 0
..............................................................................................................................CGTCGACCCTGTGCGTCTT.................. 19 3 20 0.05 1 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12928:1371842-1372004 - dvi_8449 TGGGTGGATCCATGTCCCTGCACTGCAACGGTCGCATGAAGTGGAATAATGTAAGTGCATGGA--A----------------------ATGATGTATTGATT------------------------------------------------GA-----------------------------------------T--------------CGC-------TTTTGATTGTCTTGTGCT--------------------------------------------------------------------------------T--TATGCTGCAGGATCCGGTCTTTGTCAGCTGGTACAAGCAGAACAGCCGACTGCCGAACAC----
droMoj3 scaffold_6473:13636490-13636654 + TCGGTGGCTCGATCTCGCTGCACTGCAACGGTCGCATGAAGTGGAATAATGTAAGTGATTG----A------T-------TGAGAAGT-------------------------------------GCTGGGAAATA------------------------------------------------------------------------------------------------------------------------------------------------------TCATTCGATTCCATTC--------AATTATG--CCTCCTTTAGAATCCTGTTGTCGTTAGCTGGTACAAGCAGAACAGCCAATTGCCCAACAC----
droGri2 scaffold_15203:8359291-8359453 + TGGGCGGATCTATGTCCCTGCGCTGCAGCGGTCGCATGATGTGGAACAATGTAGGTCTTTGCA--C---ATTT-----AA--------GATTGGATACAG-------T------TG-------------------------------ATCAG-----------------------------------------C--------------ATA-------TATTTA-----------------------------------------------------------------------------------------TT-T--TGCTCTGTAGGATCCGGTCTATGTCAGCTGGTCCAAGATGGGCAGCCGACTACCCAATAC----
droWil2 scf2_1100000004909:12086828-12086991 - TTGGTGGTTCTCTAACACTCACCTGCAGTGGTCGCATGCGTTGGAATAATGTGAGTAAATTGG--A------C------A--------AAA----------------------------------ACTCTTCTTCT-----------TTGA------------------------------------------------------------A------TTTTA-------TTCGAA---------------------------------------------------------------------------ATTTACTTGTTTGTATAGGATTCTGTTGGAGTGCATTGGTACAAGAATAATAGCCAATTGCCCAGTCA----
dp5 XL_group3a:2052498-2052666 - TAGGAGGATCTCTCACACTCAGCTGCAGTGGTCACATGCGATGGAACAATGTGAGTATTATCC--A------C-------CAGGGAAT-------------------------------------ACTATAAAATA--------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTTCTTATTCTGAATCATATTCCTGTTAAAGGATCCCGTGGTCGTCAGCTGGTACAAACAGAACAGCCGTCTGCCCGAAGA----
droPer2 scaffold_11:2623773-2623941 + TAGGAGGATCTCTCACACTCAGCTGCAGTGGTCACATGCGATGGAACAATGTGAGTATTATCC--A------C-------CAGGGAAT-------------------------------------ACTATAAAATA--------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTTCGTATTCTGAATCATATTCTTGTTAAAGGATCCCGTGGTCGTCAGCTGGTACAAACAGAACAGCCGTCTGCCCGAAGA----
droAna3 scaffold_12929:2288609-2288779 - TCGGCGGCTCTCTGACCCTCACCTGCAGCGGTCACATGCGCTGGAGCAATGTAAGTTGTCCCC--G------A-----AA--------GACTAGTCTT----------------CT-------------------------------ATCAT-----------------------------------------C--------------CTC-------AACTAAATGTCCTTTGGC--------------------------------------------------------------------------------A--TGTCCTTCAGGCCCCTGTGTTCGTCCACTGGTACAAGCAGAACAGCCGCCTGCCCGTGGGATAC
droBip1 scf7180000396434:282637-282802 - TCGGAGGCTCCTTGACTCTCACTTGCAGTGGTTACATGCGCTGGAGCAATGTAAGATATCCTG--G------A------A--------GACGACAACT----------------TC-------------------------------ATCAT-----------------------------------------C--------------CTC-------TACTAAATATCCTTTGAA--------------------------------------------------------------------------------A--TGTCCTTTAGGCCCCTGTGTTTGTTAACTGGTACAAGCAGAACAGTCGCCTGCCCCTGGG----
droKik1 scf7180000302258:517642-517802 - TGGGAGGATCGCTGACCCTCAGCTGTAGCGGCTACATGCGCAGGAATAATGTGAGTATTGGAT--A---CTTA--------AAGGGGT-------------------------------------TTTGTAATGGG--------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAATTA--------ATTTTTG--GTATTGTTAGGATCCTGTCTATGTGAGCTGGCACAAGGAGAGCGGCCACATGACCCAGGA----
droFic1 scf7180000453927:179114-179287 - TGGGCGGATCACTGACCCTCAGCTGTAGCGGTCGAATGCGCTGGAGCGATGTGAGTCGCAG----A------A------T--------CCCATTTACCGACT----------------------------------------------------TACCAACTC----------------------------------------------------AAC-------------TACAA-----------------------------------CT------TTACC--TTCTC-------------------GATTTCC--ATTTGCCCAGGCCCCAGTCATCGTTAACTGGTACAAGGAGAACAGTCAGCTGCCCGACAA----
droEle1 scf7180000491011:694942-695125 - TGGGCGGATCGCTGGTCCTCAGCTGTAGCGGTCGGATGCGCTGGAGCAATGTGAGTTCTAAGTTTACGCATAATCTTT-A--------TTGA---------------GATGTATACCATCTAGCG-----------AT------------------------------------------------------------------------------------------------------------------------------TCTGA-TAT------TAAC----------------------------ATTCTGTTTTGATTATAGGATCCAGTGTATGTGAACTGGTACAAGGAGAACAGTCGCATGCCAGAGGA---T
droRho1 scf7180000779506:485449-485625 - TGGGCGGATCGCTGACCCTTACCTGCAGCGGTTGGATTAGCTTTACAAATGTGAGTTTACAGT--G------A------T--------CTGG---------------TATATATACTA--TAGCT-----------ATAGC---------------------------------------------------------------------------------------------------------------------------TGTGATTAT------TAACA--TTCTT-------------------TTATTTC--GATCGCCCAGGCCCCAGTCATTGTGAACTGGTACAAGGAGGACAGTAACATGCCCAAGCA----
droBia1 scf7180000301760:4787891-4788126 + TGGGTGGATCGCTGAGCCTCAGCTGCAGCGGTCGAACGCGCTGGAGCAATGTGAGTTGCCAGG--G------A------T--------CCAAT--------------------------------TCTATAAAATAGTAGATGGTTCAGAGAACTATCAACTCTTTCAATGCATCCTTAATAACTGACAGTAACTTATTGTATTTTTG---ATGTGAT-------------TACAC----------------------------------------------C-----TT--------------------TATTTTT--TAATGCCCAGACCCCGGTCATTGTGAACTGGTACAAGGAGCACAGTCGCATGCCCGTGAG----
droTak1 scf7180000415151:428835-429032 + TGGGTGGATCGCTGACCCTCAGCTGTACCGGTCGAATGCGCTGGACCAATGTGAGTTTACAGG--G------A------T--------CTGATATAGTGGTT-----------------------------------TAGATGGTTTATAAT-----------------------------------------CATATAATATTTTTA---CTGCGAC-----------------------------------------------------------TATAACACATCTTT-------------------CAATTCC--TATCGCCCAGAGCCCAGTGTTTGTGAACTGGTACAAGCAGGGCAGTCACCTGCCCGAGGG----
droEug1 scf7180000409277:63581-63751 - TCGGCGGATCACTGACCCTCAGCTGTACCGGTCGAATGCGCTGGAGCAATGTGAGTTTACAGG--G------C------T--------GTGT---A---G-------TTGATTTTT-------------------------------TAAAT-----------------------------------------C--------------TTT-------ATCT------------------------------------------------TAT------TATC-----TTT-------------------ATTTTCT--AATCACCCAGAGCCCAGTCATTGTGAACTGGTACAAGGAAAACAGTCAACTGCCCGCTGA----
dm3 chrX:2378497-2378699 - TAGGCGGTTCCATGACCCTCAGCTGTAGCGGTCGAATGCGTTGGAGCAATGTGAGTAAACATG--A------C------T--------TTGATTAG-CGTCATAGTATATATTTTATC--CAGG------------------------------------------------------------------------------------------------TTA-------T-CCAAG------------------------TTATGTAATGCTTATGTATAACACAT-------------CG--------AATTTTA--TATCATCCAGAGTCCAGTCATTGTGAACTGGTACAAGGAGAACAGCCGCCTGCCAGAGAA----
droSim2 x:2192797-2192992 - dsi_11620 TGGGCGGTTCCATGACCCTCAGCTGTAGCGGTCGAATGCGTTGGAGCAATGTGAGTGTACATG--A------C------T--------TTGATTTG-A-TCATAGTATATATTTTATC--CAGAA-----------T---------------------------------------------------------------------------------------------------T------------------------TTATGTAATGACTATGTATAACACAT-------------CG--------AATTTTG--TATCGTCCAGAGTCCAGTTATTGTGAACTGGTACAAGGAGAACAGCCGTCTGCCAGAGAA----
droSec2 scaffold_10:2154190-2154385 - TAGGCGGTTCCATGACCCTCAGCTGTAGCGGTCGAATGCGTTGGAGCAATGTGAGTGTACATG--A------C------T--------TTGATTTG-A-TCATAGTATATATTTTATC--CAGAA-----------A---------------------------------------------------------------------------------------------------T------------------------TTATGTAATGACTATGTATAACACAT-------------CG--------AATTTTG--TATCGTCCAGAGTCCAGTCATTGTGAACTGGTACAAGGAGAACAGCCGCCTGCCAGAGAA----
droYak3 X:5967172-5967385 + TGGGCGGCTCCATGACCCTCAGCTGTAGCGGTCGAATGCGCTGGAGCAATGTGAGTTTACAGG--A------T------T--------ATG----------------TATATTTTGTC--CAGGA-----------ATAGATGATTCCTAAA-----------------------------------------CATA---------------------------A-----T-TGGC-----------GTAGTGTGAGATTATTGTGTGATTAT------TAACGTAT-------------TG--------CATTTTG--TATCGTCCAGAGTCCAGTCGTCGTCAACTGGTACAAGGAGAACAGTCGCCTGCCAGAGAA----
droEre2 scaffold_4644:2327801-2328032 - TCGGCGGTTCTATGACCCTCAGCTGTAGCGGTCGAATGCGATGGAACAATGTGAGTTGACAGG--G------A------T--------TTGATTAG-CTTCGTAATGTATATTTTGTC--CAGGA-----------ATAGGTGATTCCTGA------------------------------------------------------------A------TATTA-------T-CAAAGCAAACTTGAT--------CAATTATTATGTGATTGT------TAACCTAT-------------TG--------CATTTTG--TATCGTCCAGAGTCCAGTCATTGTGAACTGGTACAAGGAGAACAGTCGCCTGCCCGAGAA----

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TGGGTGGATCCATGTCCCTGCACTGCAACGGTCGCATGAAGTGGAATAATGTAAGTGCATGGA--A----------------------ATGATGTATTGATT------------------------------------------------GA-----------------------------------------T--------------CGC-------TTTTGATTGTCTTGTGCT--------------------------------------------------------------------------------T--TATGCTGCAGGATCCGGTCTTTGTCAGCTGGTACAAGCAGAACAGCCGACTGCCGAACAC----SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................................GTAAGTGCATGGA--A----------------------ATGATGTATTGAT..........................................................................................................................................................................................................................................................................................2712.002000000000000000000000000010100000000000000000000000000000000000
.......................TGCAACGGTCGCATGAAGTGGA..................................................................................................................................................................................................................................................................................................................................................2212.002000002000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................GATCCGGTCTTTGTCAGCTGGTACAAGC..........................2811.001000100000000000000000000000000000000000000000000000000000000000
................................CGCATGAAGTGGAATAATG............................................................................................................................................................................................................................................................................................................................................1911.001000000010000000000000000000000000000000000000000000000000000000
..........................AACGGTCGCATGAAGTGGA..................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000001000000000000000000000000000000000000000000
...................GCACTGCAACGGTCGCATGAAGTGGA..................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000001000
..........................................................................................................................................................................................................................................................................................................................................ATCCGGTCTTTGTCAGCTGGT................................2111.001000000000000000000000000001000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................GCTGGTACAAGCAGAACAGCCGACT.............2511.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................AGAACAGCCGACTGCCGAAC......2011.001000000000000001000000000000000000000000000000000000000000000000
................................CGCATGAAGTGGAATAAT.............................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000010000000000000000000000000000000000000
...........................ACGGTCGCATGAAGTGGAATA...............................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................................................GTGCT--------------------------------------------------------------------------------T--TATGCTGCAGGATCC.................................................2111.001000100000000000000000000000000000000000000000000000000000000000
.....GGATCCATGTCCCTGCACTGCAACGGTC..............................................................................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
..........CATGTCCCTGCACTGCAACGGTCGC............................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000010000
...................GCACTGCAACGGTCGCATGAAGTGG...................................................................................................................................................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
............TGTCCCTGCACTGCAACGGTCGCA...........................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................GTACAAGCAGAACAGCCGACTGCC..........2411.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................GTACAAGCAGAACAGCCGACT.............2111.001000100000000000000000000000000000000000000000000000000000000000
.....GGATCCATGTCCCTGCACTGC.....................................................................................................................................................................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
.................................GCATGAAGTGGAATAATGATC.........................................................................................................................................................................................................................................................................................................................................2150.201000100000000000000000000000000000000000000000000000000000000000
droMoj3
TCGGTGGCTCGATCTCGCTGCACTGCAACGGTCGCATGAAGTGGAATAATGTAAGTGATTG----A------T-------TGAGAAGT-------------------------------------GCTGGGAAATA------------------------------------------------------------------------------------------------------------------------------------------------------TCATTCGATTCCATTC--------AATTATG--CCTCCTTTAGAATCCTGTTGTCGTTAGCTGGTACAAGCAGAACAGCCAATTGCCCAACAC----SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................CAACGGTCGCATGAAGTGGAA.................................................................................................................................................................................................................................................................................................................................................2111.001000001
droGri2
TGGGCGGATCTATGTCCCTGCGCTGCAGCGGTCGCATGATGTGGAACAATGTAGGTCTTTGCA--C---ATTT-----AA--------GATTGGATACAG-------T------TG-------------------------------ATCAG-----------------------------------------C--------------ATA-------TATTTA-----------------------------------------------------------------------------------------TT-T--TGCTCTGTAGGATCCGGTCTATGTCAGCTGGTCCAAGATGGGCAGCCGACTACCCAATAC----SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
................................................................................................................................................................................................................................................................................................................................................................CAAGATGGGCAGCCGACTACC..........2112.00220
................CCTGCGCTGCAGCGGTCGCATG.........................................................................................................................................................................................................................................................................................................................................................2212.00220
................CCTGCGCTGCAGCGGTCGCATGATGTG....................................................................................................................................................................................................................................................................................................................................................2711.00101
.....................GCTGCAGCGGTCGCATGATGTG....................................................................................................................................................................................................................................................................................................................................................2211.00101
..........................AGCGGTCGCATGATGTGGAAC................................................................................................................................................................................................................................................................................................................................................2111.00101
.........................................................................................................................................................................................................................................................................................................................................GATCCGGTCTATGTCAGCTGGTC...............................2311.00110
......................................................................................................................................................................................................................................................................................................................................................TCAGCTGGTCCAAGATGGG......................1911.00110
..................................................................................................................................................................................................................................................................................................................................................................AGATGGGCAGCCGACTACC..........1911.00110
.................CTGCGCTGCAGCGGTCGCA...........................................................................................................................................................................................................................................................................................................................................................1911.00110
..........................AGCGGTCGCATGATGTGGA..................................................................................................................................................................................................................................................................................................................................................1911.00101
.........................CAGCGGTCGCATGATGTGGA..................................................................................................................................................................................................................................................................................................................................................2011.00101
..GGCGGATCTATGTCCCTGCGCTGCA....................................................................................................................................................................................................................................................................................................................................................................2511.00110
................................CGCATGATGTGGAACAATGATC.........................................................................................................................................................................................................................................................................................................................................2211.00110
...........................................................................................................................................................................................................................................................................................................................................TCCGGTCTATGTCAGCTG..................................1811.00110
...........................GCGGTCGCATGATGTGGAACAATGAT..........................................................................................................................................................................................................................................................................................................................................2611.00101
....................CGCTGCAGCGGTCGCATGATGT.....................................................................................................................................................................................................................................................................................................................................................2211.00110
..............................GTCGCATGATGTGGAACA...............................................................................................................................................................................................................................................................................................................................................1811.00110
..............................................................................................................................................................................................................................................................................................................................................GGTCTATGTCAGCTGGTC...............................1811.00110
.....................GCTGCAGCGGTCGCATGATGTGGA..................................................................................................................................................................................................................................................................................................................................................2411.00101
....................CGCTGCAGCGGTCGCATGATGTGGA..................................................................................................................................................................................................................................................................................................................................................2511.00110
........................GCAGCGGTCGCATGATGTGGAACA...............................................................................................................................................................................................................................................................................................................................................2411.00110
.....................GCTGCAGCGGTCGCATGATGTGGAACA...............................................................................................................................................................................................................................................................................................................................................2711.00110
........................GCAGCGGTCGCATGATGTGGA..................................................................................................................................................................................................................................................................................................................................................2111.00110
..........................AGCGGTCGCATGATGTGGAACAATG............................................................................................................................................................................................................................................................................................................................................2511.00101
..GGCGGATCTATGTCCCTGC..........................................................................................................................................................................................................................................................................................................................................................................1911.00110
............TGTCCCTGCGCTGCAGCGGTC..............................................................................................................................................................................................................................................................................................................................................................2111.00101
......GATCTATGTCCCTGCGCTG......................................................................................................................................................................................................................................................................................................................................................................1911.00110
................................................................................................................................................................................................................................................................................................................................................................CAAGATGGGCAGCCGACTACCCA........2311.00110
........................GCAGCGGTCGCATGATGTG....................................................................................................................................................................................................................................................................................................................................................1911.00101
.......................................................................................................................................................................................................................................................................................................................................................CAGCTGGTCCAAGATGGGCA....................2011.00110
......................CTGCAGCGGTCGCATGATG......................................................................................................................................................................................................................................................................................................................................................1911.00101
........................GCAGCGGTCGCATGATGTGGAA.................................................................................................................................................................................................................................................................................................................................................2211.00101
droWil2
TTGGTGGTTCTCTAACACTCACCTGCAGTGGTCGCATGCGTTGGAATAATGTGAGTAAATTGG--A------C------A--------AAA----------------------------------ACTCTTCTTCT-----------TTGA------------------------------------------------------------A------TTTTA-------TTCGAA---------------------------------------------------------------------------ATTTACTTGTTTGTATAGGATTCTGTTGGAGTGCATTGGTACAAGAATAATAGCCAATTGCCCAGTCA----SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............................................................................................................................................................................................................................................................................................................................................GTTGGAGTGCATTGGTACA.............................1912.00201001
....................ACCTGCAGTGGTCGCATGC........................................................................................................................................................................................................................................................................................................................................................1911.00101000
..............................................................................................................................................................................................................................................................................................................................................TGTTGGAGTGCATTGGTACA.............................2011.00100010
...................CACCTGCAGTGGTCGCATGCGTTGGA..................................................................................................................................................................................................................................................................................................................................................2611.00100010
.......TTCTCTAACACTCACCTGCAGTGGTCGCA...........................................................................................................................................................................................................................................................................................................................................................2911.00101000
.......................................................................................................................................................................................................................................................................................................................................................................AATAGCCAATTGCCCAGTC.....1911.00100010
...................CACCTGCAGTGGTCGCATGC........................................................................................................................................................................................................................................................................................................................................................2011.00100010
.......................TGCAGTGGTCGCATGCGTTGGAAT................................................................................................................................................................................................................................................................................................................................................2411.00110000
...............................................................................................................................................................................................................................................................................................................................................GTTGGAGTGCATTGGTACAAGA..........................2211.00101000
..........................................................................................................................................................................................................................................................................................................................................ATTCTGTTGGAGTGCATT...................................1811.00100010
.........................................................................................................................................................................................................................................................................................................................................GATTCTGTTGGAGTGCATT...................................1911.00101000
................ACTCACCTGCAGTGGTCGCATGCGT......................................................................................................................................................................................................................................................................................................................................................2511.00100010
............................................................................................................................................................................................................................................................................................................................................................GGTACAAGAATAATAGCCAAT..............2111.00100010
.....................................................................................................................................................................................................................................................................................................................................................................ATAATAGCCAATTGCCCAGTC.....2111.00100010
........................................................................................................................................................................................................................................................................................................................................................................ATAGCCAATTGCCCAGTC.....1811.00100010
...........................................................................................................................................................................................................................................................................................................................................................TGGTACAAGAATAATAGCC.................1911.00100010
.................................................................................................................................................................................................................................................................................................................................................TGGAGTGCATTGGTACAAGAATAAT.....................2511.00101000
dp5
TAGGAGGATCTCTCACACTCAGCTGCAGTGGTCACATGCGATGGAACAATGTGAGTATTATCC--A------C-------CAGGGAAT-------------------------------------ACTATAAAATA--------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTTCTTATTCTGAATCATATTCCTGTTAAAGGATCCCGTGGTCGTCAGCTGGTACAAACAGAACAGCCGTCTGCCCGAAGA----SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................ACTCAGCTGCAGTGGTCACATGCGA......................................................................................................................................................................................................................................................................................................................................................2511.0010000100000
......................CTGCAGTGGTCACATGCGATGGAA.................................................................................................................................................................................................................................................................................................................................................2411.0010000010000
....................................................................................................................................................................................................................................................................................................................................................CGTCAGCTGGTACAAACAGA.......................2011.0010100000000
..................TCAGCTGCAGTGGTCACATG.........................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
................ACTCAGCTGCAGTGGTCACATG.........................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................AGAACAGCCGTCTGCCCGAAG.....2111.0010000010000
......................................................................................................................................................................................................................................................................................................................................................................GAACAGCCGTCTGCCCGAA......1911.0010000100000
....AGGATCTCTCACACTCAGCTGCAGTGGT...............................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................GTACAAACAGAACAGCCGC...............1911.0010010000000
TAGGAGGATCTCTCACACTC...........................................................................................................................................................................................................................................................................................................................................................................2011.0010010000000
...............................................................................................................................................................................................................................................................................................................................................................ACAAACAGAACAGCCGTCTGCC..........2211.0010000000001
droPer2
TAGGAGGATCTCTCACACTCAGCTGCAGTGGTCACATGCGATGGAACAATGTGAGTATTATCC--A------C-------CAGGGAAT-------------------------------------ACTATAAAATA--------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTTCGTATTCTGAATCATATTCTTGTTAAAGGATCCCGTGGTCGTCAGCTGGTACAAACAGAACAGCCGTCTGCCCGAAGA----SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........................................................................................................................................................................................................................................................................................................................................ATCCCGTGGTCGTCAGCTGGTACA.............................2413.003300000
...........................................................................................................................................................................................................................................................................................................................................TCCCGTGGTCGTCAGCTGGT................................2012.002200000
..........................................................................................................................................................................................................................................................................................................................................ATCCCGTGGTCGTCAGCTGGTACAAACA.........................2812.002200000
..........................................................................................................................................................................................................................................................................................................................................ATCCCGTGGTCGTCAGCTGGTACAAACAG........................2912.002200000
...........................................................................................................................................................................................................................................................................................................................................TCCCGTGGTCGTCAGCTG..................................1812.002200000
..........................................................................................................................................................................................................................................................................................................................................ATCCCGTGGTCGTCAGCTGGTAC..............................2312.002200000
............................................................................................................................................................................................................................................................................................................................................................GGTACAAACAGAACAGCCGTCT.............2211.001001000
.........................................................................................................................................................................................................................................................................................................................................GATCCCGTGGTCGTCAGCTGGTACAAA...........................2711.001100000
.............................................................................................................................................................................................................................................................................................................................................CCGTGGTCGTCAGCTGGTAC..............................2011.001001000
.........................................................................................................................................................................................................................................................................................................................................GATCCCGTGGTCGTCAGCTG..................................2011.001100000
.........................................................................................................................................................................................................................................................................................................................................GATCCCGTGGTCGTCAGCT...................................1911.001100000
..................................................................................................................................................................................................................................................................................................................................GTTAAAGGATCCCGTGGTCGTC.......................................2211.001001000
................ACTCAGCTGCAGTGGTCAC............................................................................................................................................................................................................................................................................................................................................................1911.001001000
.................CTCAGCTGCAGTGGTCACA...........................................................................................................................................................................................................................................................................................................................................................1911.001010000
..........................................................................................................................................................................................................................................................................................................................................ATCCCGTGGTCGTCAGCT...................................1811.001100000
.........................................................................................................................................................................................................................................................................................................................................GATCCCGTGGTCGTCAGCTGG.................................2111.001001000
droAna3
TCGGCGGCTCTCTGACCCTCACCTGCAGCGGTCACATGCGCTGGAGCAATGTAAGTTGTCCCC--G------A-----AA--------GACTAGTCTT----------------CT-------------------------------ATCAT-----------------------------------------C--------------CTC-------AACTAAATGTCCTTTGGC--------------------------------------------------------------------------------A--TGTCCTTCAGGCCCCTGTGTTCGTCCACTGGTACAAGCAGAACAGCCGCCTGCCCGTGGGATACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....GGCTCTCTGACCCTCACCTGCAGC..................................................................................................................................................................................................................................................................................................................................................................2412.002020000
...................................................................................................................................................................................................................................................................................................................................................................GCAGAACAGCCGCCTGCCCGTGGG....2411.001010000
.......CTCTCTGACCCTCACCTGCAGC..................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.............GACCCTCACCTGCAGCGGTCACATGCGC......................................................................................................................................................................................................................................................................................................................................................2811.001100000
...................CACCTGCAGCGGTCACATGC........................................................................................................................................................................................................................................................................................................................................................2011.001010000
....................ACCTGCAGCGGTCACATGCGCTG....................................................................................................................................................................................................................................................................................................................................................2311.001010000
........................................................................................................................................................................................................................................................................................................................................................CACTGGTACAAGCAGAACAGCCGCC..............2511.001100000
........................................................................................................................................................................................................................................................................................................................................................CACTGGTACAAGCAGAACAGCC.................2211.001010000
......GCTCTCTGACCCTCACCTGCAGC..................................................................................................................................................................................................................................................................................................................................................................2311.001010000
................................CACATGCGCTGGAGCAATGCCC.........................................................................................................................................................................................................................................................................................................................................2220.501010000
droBip1
TCGGAGGCTCCTTGACTCTCACTTGCAGTGGTTACATGCGCTGGAGCAATGTAAGATATCCTG--G------A------A--------GACGACAACT----------------TC-------------------------------ATCAT-----------------------------------------C--------------CTC-------TACTAAATATCCTTTGAA--------------------------------------------------------------------------------A--TGTCCTTTAGGCCCCTGTGTTTGTTAACTGGTACAAGCAGAACAGTCGCCTGCCCCTGGG----SizeHit CountTotal NormTotal
No Reads
droKik1
TGGGAGGATCGCTGACCCTCAGCTGTAGCGGCTACATGCGCAGGAATAATGTGAGTATTGGAT--A---CTTA--------AAGGGGT-------------------------------------TTTGTAATGGG--------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAATTA--------ATTTTTG--GTATTGTTAGGATCCTGTCTATGTGAGCTGGCACAAGGAGAGCGGCCACATGACCCAGGA----SizeHit CountTotal NormTotal
No Reads
droFic1
TGGGCGGATCACTGACCCTCAGCTGTAGCGGTCGAATGCGCTGGAGCGATGTGAGTCGCAG----A------A------T--------CCCATTTACCGACT----------------------------------------------------TACCAACTC----------------------------------------------------AAC-------------TACAA-----------------------------------CT------TTACC--TTCTC-------------------GATTTCC--ATTTGCCCAGGCCCCAGTCATCGTTAACTGGTACAAGGAGAACAGTCAGCTGCCCGACAA----SizeHit CountTotal NormTotal
No Reads
droEle1
TGGGCGGATCGCTGGTCCTCAGCTGTAGCGGTCGGATGCGCTGGAGCAATGTGAGTTCTAAGTTTACGCATAATCTTT-A--------TTGA---------------GATGTATACCATCTAGCG-----------AT------------------------------------------------------------------------------------------------------------------------------TCTGA-TAT------TAAC----------------------------ATTCTGTTTTGATTATAGGATCCAGTGTATGTGAACTGGTACAAGGAGAACAGTCGCATGCCAGAGGA---TSizeHit CountTotal NormTotal
No Reads
droRho1
TGGGCGGATCGCTGACCCTTACCTGCAGCGGTTGGATTAGCTTTACAAATGTGAGTTTACAGT--G------A------T--------CTGG---------------TATATATACTA--TAGCT-----------ATAGC---------------------------------------------------------------------------------------------------------------------------TGTGATTAT------TAACA--TTCTT-------------------TTATTTC--GATCGCCCAGGCCCCAGTCATTGTGAACTGGTACAAGGAGGACAGTAACATGCCCAAGCA----SizeHit CountTotal NormTotal
No Reads
droBia1
TGGGTGGATCGCTGAGCCTCAGCTGCAGCGGTCGAACGCGCTGGAGCAATGTGAGTTGCCAGG--G------A------T--------CCAAT--------------------------------TCTATAAAATAGTAGATGGTTCAGAGAACTATCAACTCTTTCAATGCATCCTTAATAACTGACAGTAACTTATTGTATTTTTG---ATGTGAT-------------TACAC----------------------------------------------C-----TT--------------------TATTTTT--TAATGCCCAGACCCCGGTCATTGTGAACTGGTACAAGGAGCACAGTCGCATGCCCGTGAG----SizeHit CountTotal NormTotal
No Reads
droTak1
TGGGTGGATCGCTGACCCTCAGCTGTACCGGTCGAATGCGCTGGACCAATGTGAGTTTACAGG--G------A------T--------CTGATATAGTGGTT-----------------------------------TAGATGGTTTATAAT-----------------------------------------CATATAATATTTTTA---CTGCGAC-----------------------------------------------------------TATAACACATCTTT-------------------CAATTCC--TATCGCCCAGAGCCCAGTGTTTGTGAACTGGTACAAGCAGGGCAGTCACCTGCCCGAGGG----SizeHit CountTotal NormTotal
No Reads
droEug1
TCGGCGGATCACTGACCCTCAGCTGTACCGGTCGAATGCGCTGGAGCAATGTGAGTTTACAGG--G------C------T--------GTGT---A---G-------TTGATTTTT-------------------------------TAAAT-----------------------------------------C--------------TTT-------ATCT------------------------------------------------TAT------TATC-----TTT-------------------ATTTTCT--AATCACCCAGAGCCCAGTCATTGTGAACTGGTACAAGGAAAACAGTCAACTGCCCGCTGA----SizeHit CountTotal NormTotal
No Reads
dm3
TAGGCGGTTCCATGACCCTCAGCTGTAGCGGTCGAATGCGTTGGAGCAATGTGAGTAAACATG--A------C------T--------TTGATTAG-CGTCATAGTATATATTTTATC--CAGG------------------------------------------------------------------------------------------------TTA-------T-CCAAG------------------------TTATGTAATGCTTATGTATAACACAT-------------CG--------AATTTTA--TATCATCCAGAGTCCAGTCATTGTGAACTGGTACAAGGAGAACAGCCGCCTGCCAGAGAA----SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................TACAAGGAGAACAGCCGCCTGCCAGA.......2617.0070000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000030000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................TCAGCTGTAGCGGTCGAATGCGTT.....................................................................................................................................................................................................................................................................................................................................................2416.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000010100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................TCATTGTGAACTGGTACAAGGAG........................2315.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................TCATTGTGAACTGGTACAAGG..........................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TCAGCTGTAGCGGTCGAATGCGTTGG...................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000
..............ACCCTCAGCTGTAGCGGTCGAATGCGTT.....................................................................................................................................................................................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TTCCATGACCCTCAGCTGTAGCGGT...............................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................CATTGTGAACTGGTACAAGGAGAACA....................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ACCCTCAGCTGTAGCGGT...............................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GCTGTAGCGGTCGAATGC........................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................ACTGGTACAAGGAGAACAGCCGCCTGC...........2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............CCCTCAGCTGTAGCGGTCGAATGCGTT.....................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................GTAGCGGTCGAATGCGTTGG...................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TCCATGACCCTCAGCTGTAGCGGT...............................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................AGGAGAACAGCCGCCTGCCA.........2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TCAGCTGTAGCGGTCGAATGCGTTGGA..................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................ACAAGGAGAACAGCCGCC..............1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...............CCCTCAGCTGTAGCGGTCG.............................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.......................TGTAGCGGTCGAATGCGTTGGAGCAATG............................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................................................................................................................................................................................................................................................................................................................................................TACAAGGAGAACAGCCGCCTGCCAGAG......2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GTCGAATGCGTTGGAGCAATA............................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GCTGTAGCGGTCGAATGCGTTGG...................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......................CTGTAGCGGTCGAATGCGTTGG...................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.....................GCTGTAGCGGTCGAATGCGTTG....................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................GCTTATGTATAACACAT-------------CG--------.........................................................................1911.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................GAGAACAGCCGCCTGCCAGAGAA----2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................TGAACTGGTACAAGGAGAACAGCCGCC..............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........TCCATGACCCTCAGCTGTAGCGGTC..............................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TGACCCTCAGCTGTAGCGGT...............................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................TGTAGCGGTCGAATGCGTTGG...................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
......................CTGTAGCGGTCGAATGCGTTGGAGCA...............................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................GTCGAATGCGTTGGAGCAA..............................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................GGAGAACAGCCGCCTGCCA.........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................AGCGGTCGAATGCGTTGGAGC................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
................................................................................................................................................................................................................................................................................................................................................................CAAGGAGAACAGCCGCCTGC...........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CTCAGCTGTAGCGGTCGAATGCGTT.....................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................TCATTGTGAACTGGTACAAGGAGAACA....................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............CCCTCAGCTGTAGCGGTC..............................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AGCTGTAGCGGTCGAATGC........................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...............................TCGAATGCGTTGGAGCAATGTGAGT.......................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GCTGTAGCGGTCGAATGCGTTGGA..................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................CAGTCATTGTGAACTGGTACAAGGAG........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................AATGCGTTGGAGCAATGTGAGTA......................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................TACAAGGAGAACAGCCGCCTGCCAGAGAA----2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TGTAGCGGTCGAATGCGTTGGAGCAA..............................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................TGGTACAAGGAGAACAGCCG................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................ATTGTGAACTGGTACAAGGAG........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................GTACAAGGAGAACAGCCGCCTGCCAGA.......2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................CTGGTACAAGGAGAACAGCCGCCTGC...........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.......................................................................................................................................................................................................................................................................................TAACACAT-------------CG--------AATTTTA--TATCG...........................................................2211.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................CAGTCATTGTGAACTGGTACAAGGA.........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......GTTCCATGACCCTCAGCTGTAGCGGT...............................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................ATTGTGAACTGGTACAAGG..........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
.............GACCCTCAGCTGTAGCGGTCGAAT..........................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TCCATGACCCTCAGCTGTAGCGG................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CTCAGCTGTAGCGGTCGAAT..........................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CTCAGCTGTAGCGGTCG.............................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................CCAAG------------------------TTATGTAATGCTTATGTA........................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CTCAGCTGTAGCGGTCGAATGCGTTGG...................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..........................AGCGGTCGAATGCGTTGGAGCA...............................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
........................................................................................................................................................................................................................................CCAAG------------------------TTATGTAATGCTTATGT.........................................................................................................2211.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................CATTGTGAACTGGTACAAGGA.........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................AACATG--A------C------T--------TTGATTAG-CGTCATAGTA....................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................GTAGCGGTCGAATGCGTTGGAGC................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CCTCAGCTGTAGCGGTCGAATGC........................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CGGTCGAATGCGTTGGAGCA...............................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................GCGGTCGAATGCGTTGGAGC................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AGCTGTAGCGGTCGAATGCGTTG....................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................TGTGAACTGGTACAAGGAGAACAGCCGCC..............2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................GGTACAAGGAGAACAGCCGC...............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............CCCTCAGCTGTAGCGGTCGA............................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................TAACACAT-------------CG--------AATTTTA--TATCA...........................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
droSim2
TGGGCGGTTCCATGACCCTCAGCTGTAGCGGTCGAATGCGTTGGAGCAATGTGAGTGTACATG--A------C------T--------TTGATTTG-A-TCATAGTATATATTTTATC--CAGAA-----------T---------------------------------------------------------------------------------------------------T------------------------TTATGTAATGACTATGTATAACACAT-------------CG--------AATTTTG--TATCGTCCAGAGTCCAGTTATTGTGAACTGGTACAAGGAGAACAGCCGTCTGCCAGAGAA----SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................................................................................................................................................................................................................................TTGTGAACTGGTACAAGGAGAACAGC..................2613.00300000000002010000
..................................................................................................................................................................................................................................................................................................................................................ATTGTGAACTGGTACAAGGA.........................2012.00200020000000000000
........TCCATGACCCTCAGCTGTAGCGGT...............................................................................................................................................................................................................................................................................................................................................................2412.00200000011000000000
..........................................................................................................................................................................................................................................................................................................................................GTCCAGTTATTGTGAACTG..................................1912.00201100000000000000
................................CGAATGCGTTGGAGCAAT.............................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
....................AGCTGTAGCGGTCGAATGC........................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
.......TTCCATGACCCTCAGCTGT.....................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
........TCCATGACCCTCAGCTGT.....................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
........................................................................................................................................................................................................................................................................................................................................................AACTGGTACAAGGAGA.......................1611.00100000000100000000
.........................................................................................................................................................................................................................................................................................................................................AGTCCAGTTATTGTGAACT...................................1911.00100010000000000000
............................................................................................................................................................................................................................................................................................................................................................GGTACAAGGAGAACAGCCGTCTGC...........2411.00100000000000100000
....................AGCTGTAGCGGTCGAATGCGTTGGA..................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
..............................................................................................................................................................................................................................................................................................................................................AGTTATTGTGAACTGGTACAAGGA.........................2411.00101000000000000000
.............................................................................................................................................................................................................................................................................................................................................CAGTTATTGTGAACTGGTAC..............................2011.00100010000000000000
.........................................................................................................................................................................................................................................................................................................................................AGTCCAGTTATTGTGAACTGGT................................2211.00100000000000100000
...................CAGCTGTAGCGGTCGAATGC........................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
.................................................................................................................................................................................................................................................................................................................................................TATTGTGAACTGGTACAAGGAGAA......................2411.00100100000000000000
....................AGCTGTAGCGGTCGAATGCGTTGG...................................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
...............................................................................................................................................................................................................................................................................................................................................GTTATTGTGAACTGGTACAAGG..........................2211.00100010000000000000
..............................GTCGAATGCGTTGGAGCG...............................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
..................TCAGCTGTAGCGGTCGAATGCGTT.....................................................................................................................................................................................................................................................................................................................................................2411.00100000010000000000
..........................................................................................................................................................................................................................................................................................................................................................CTGGTACAAGGAGAACAGCCGTCTGCC..........2711.00101000000000000000
................................CGAATGCGTTGGAGCAATAGT..........................................................................................................................................................................................................................................................................................................................................2130.33101000000000000000
droSec2
TAGGCGGTTCCATGACCCTCAGCTGTAGCGGTCGAATGCGTTGGAGCAATGTGAGTGTACATG--A------C------T--------TTGATTTG-A-TCATAGTATATATTTTATC--CAGAA-----------A---------------------------------------------------------------------------------------------------T------------------------TTATGTAATGACTATGTATAACACAT-------------CG--------AATTTTG--TATCGTCCAGAGTCCAGTCATTGTGAACTGGTACAAGGAGAACAGCCGCCTGCCAGAGAA----SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............GACCCTCAGCTGTAGCGGT...............................................................................................................................................................................................................................................................................................................................................................1913.0030030
........................GTAGCGGTCGAATGCGTTGGAGC................................................................................................................................................................................................................................................................................................................................................2312.0020020
.......TTCCATGACCCTCAGCTGTAGCGGT...............................................................................................................................................................................................................................................................................................................................................................2512.0020020
............TGACCCTCAGCTGTAGCGGT...............................................................................................................................................................................................................................................................................................................................................................2012.0020011
..................................................................................................................................................................................................................................................................................................................................................ATTGTGAACTGGTACAAGGA.........................2011.0010010
......GTTCCATGACCCTCAGCTGTAGCGGT...............................................................................................................................................................................................................................................................................................................................................................2611.0010010
................CCTCAGCTGTAGCGGTCGAATGC........................................................................................................................................................................................................................................................................................................................................................2311.0010010
................................................................................................................................................................................................................................................................................................................................................................CAAGGAGAACAGCCGCCTGCCAGAGA.....2611.0010010
.........CCATGACCCTCAGCTGTAGCGGT...............................................................................................................................................................................................................................................................................................................................................................2311.0010010
.....GGTTCCATGACCCTCAGCTGTAGCGGT...............................................................................................................................................................................................................................................................................................................................................................2711.0010010
.................................................................................................................................................................................................................................................................................................................................................................AAGGAGAACAGCCGCCTGC...........1911.0010001
.............................................................................................................................................................................................................................................................................................................................................................GTACAAGGAGAACAGCCGCCTGC...........2311.0010010
........................GTAGCGGTCGAATGCGTTGGAGCA...............................................................................................................................................................................................................................................................................................................................................2411.0010010
..................................................................................................................................................................................................................................................................................................................................................ATTGTGAACTGGTACAAGGAGAACAGC..................2711.0010010
..........CATGACCCTCAGCTGTAGCGGT...............................................................................................................................................................................................................................................................................................................................................................2211.0010010
................................CGAATGCGTTGGAGCAATAGT..........................................................................................................................................................................................................................................................................................................................................2130.3310010
droYak3
TGGGCGGCTCCATGACCCTCAGCTGTAGCGGTCGAATGCGCTGGAGCAATGTGAGTTTACAGG--A------T------T--------ATG----------------TATATTTTGTC--CAGGA-----------ATAGATGATTCCTAAA-----------------------------------------CATA---------------------------A-----T-TGGC-----------GTAGTGTGAGATTATTGTGTGATTAT------TAACGTAT-------------TG--------CATTTTG--TATCGTCCAGAGTCCAGTCGTCGTCAACTGGTACAAGGAGAACAGTCGCCTGCCAGAGAA----SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................................................................................................................................................................................................................................................................................................................AGTCCAGTCGTCGTCAACTGGTACAAGGAG........................30110.0010000000000010
.................................................................................................................................................................................................................................................................................................................................................CGTCGTCAACTGGTACAAGGA.........................2114.00400000000004
................CCTCAGCTGTAGCGGTCGAATGCGC......................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
...............................................................................................................................................................................................................................................................................................................................................GTCGTCGTCAACTGGTAC..............................1811.00100100000000
...................CAGCTGTAGCGGTCGAATGCGCTGG...................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
................................................................................................................................................................................................................................................................................................................................................................CAAGGAGAACAGTCGCCTGCCAGA.......2411.00100100000000
..............ACCCTCAGCTGTAGCGGTCGAATGCGC......................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
..................................................................................................................................................................................................................................................................................................................................................................AGGAGAACAGTCGCCTGCCAGAGA.....2411.00100100000000
............TGACCCTCAGCTGTAGCGGT...............................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
...........ATGACCCTCAGCTGTAGCGG................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
.............................................................................................................................................................................................................................................................................................................................................CAGTCGTCGTCAACTGGTACAAGGAGA.......................2711.00101000000000
.....................................................................................................................................................AAA-----------------------------------------CATA---------------------------A-----T-TGGC-----------GTAGTGTGA...............................................................................................................................2211.00100000010000
...................CAGCTGTAGCGGTCGAATGCGCTGGA..................................................................................................................................................................................................................................................................................................................................................2611.00100010000000
.........CCATGACCCTCAGCTGTAGC..................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
..............ACCCTCAGCTGTAGCGGTCGAATGC........................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
................................CGAATGCGCTGGAGCAATAGT..........................................................................................................................................................................................................................................................................................................................................2120.50101000000000
droEre2
TCGGCGGTTCTATGACCCTCAGCTGTAGCGGTCGAATGCGATGGAACAATGTGAGTTGACAGG--G------A------T--------TTGATTAG-CTTCGTAATGTATATTTTGTC--CAGGA-----------ATAGGTGATTCCTGA------------------------------------------------------------A------TATTA-------T-CAAAGCAAACTTGAT--------CAATTATTATGTGATTGT------TAACCTAT-------------TG--------CATTTTG--TATCGTCCAGAGTCCAGTCATTGTGAACTGGTACAAGGAGAACAGTCGCCTGCCCGAGAA----SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
TCGGCGGTTCTATGACCCTCAGCTGT.....................................................................................................................................................................................................................................................................................................................................................................2618.0081000007
..............................................................................................................................................................................................................................................................................................................................................................TACAAGGAGAACAGTCGCCTGCCCGAGA.....2813.0031000002
.............GACCCTCAGCTGTAGCGGT...............................................................................................................................................................................................................................................................................................................................................................1912.0020000020
.........CTATGACCCTCAGCTGTAGCGGT...............................................................................................................................................................................................................................................................................................................................................................2312.0020001010
.......................................................................................................................................................................................................................................................................................................................................................GAACTGGTACAAGGAGAACAGT..................2211.0010100000
..............................................................................................................................................................................................................................................................................................................................................AGTCATTGTGAACTGGTACAAGGA.........................2411.0011000000
...........ATGACCCTCAGCTGTAGCGGT...............................................................................................................................................................................................................................................................................................................................................................2111.0010100000
..................TCAGCTGTAGCGGTCGAATGCGATG....................................................................................................................................................................................................................................................................................................................................................2511.0011000000
.......TTCTATGACCCTCAGCTGTAGC..................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
..............................................................................................................................................................................................................................................................................................................................................AGTCATTGTGAACTGGTA...............................1811.0010000010
.............................GGTCGAATGCGATGGAACAATA............................................................................................................................................................................................................................................................................................................................................2211.0010000100
...................CAGCTGTAGCGGTCGAATGCG.......................................................................................................................................................................................................................................................................................................................................................2111.0010000010
.............GACCCTCAGCTGTAGCGGTCG.............................................................................................................................................................................................................................................................................................................................................................2111.0011000000
...........................................................................................................................................................................................................................................................................................................................................................TGGTACAAGGAGAACAGTCGCCTGCC..........2611.0011000000
.....................................................................................................................................................................................................................................................................................................................................................................AGAACAGTCGCCTGCCCGAGAA----2211.0010100000
...................CAGCTGTAGCGGTCGAATGC........................................................................................................................................................................................................................................................................................................................................................2011.0011000000
...................CAGCTGTAGCGGTCGAATGCGATGG...................................................................................................................................................................................................................................................................................................................................................2511.0010000010
......GTTCTATGACCCTCAGCTGTAGCGGT...............................................................................................................................................................................................................................................................................................................................................................2611.0010000100
................................CGAATGCGATGGAACAATAGT..........................................................................................................................................................................................................................................................................................................................................2140.5020000020

Generated: 05/17/2015 at 04:14 AM