ID:

dvi_8387

 Coordinate:

scaffold_12928:1167059-1167209 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-26.5 -26.3 -26.0 -25.5

Flybase annnotation

exon [dvir_GLEANR_17276:3]; CDS [Dvir\GJ16768-cds]; intron [Dvir\GJ16768-in]

Repeatable elements

NameClassFamilyStrand
(TG)nSimple_repeatSimple_repeat+
mature
star
  1. scaffold_12726:33308-33326 -
  2. scaffold_12875:5112635-5112653 +
  3. scaffold_12875:10116060-10116078 +
  4. scaffold_12875:17946758-17946776 -
  5. scaffold_12928:311663-311681 +
  6. dvi_8387  scaffold_12928:1167090-1167108 +
  7. scaffold_12928:6597444-6597462 +
  8. scaffold_12928:7620062-7620080 -
  9. scaffold_12932:1634359-1634377 +
  10. scaffold_12963:17704376-17704394 -
  11. scaffold_12970:4796937-4796955 +
  12. scaffold_13049:17728836-17728854 +
  13. scaffold_13049:18428073-18428091 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CAACAATTTTGACCGCCAGCTTGTTGAGCGTAAGTGTGTGTGTGTGTGTGTGTGTGTGCGTGCGAGTGCGTGTGTGTGTGCGTGCGTGCGTGTGAGTGTGACACTTGCAATTAGCAAAGCTCCGAAGCTCTCTATCAAAATGCAACTGTAAACGTTTCGCTAACGCCTTCTCGCTCTCGCTCTCGCTCTCTTTGAACGCAGGTGGATCTGATATTCAACGAGGAGGGCTCCTGCCCGCTGTGCAACAAGAC
*********************************************************************************.(((..(((.(((((.((((.....((...((((.((((.................................)))).))))..))....)))).)))))...)))...........))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060670
9_testes_total
 V053
head
 M047
female body
 M027
male body		 V116
male body		 SRR060658
140_ovaries_total
 SRR060663
160_0-2h_embryos_total
 SRR060679
140x9_testes_total
 SRR060687
9_0-2h_embryos_total
 SRR060656
9x160_ovaries_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060669
160x9_females_carcasses_total
 SRR060665
9_females_carcasses_total
 V047
embryo
 SRR060662
9x160_0-2h_embryos_total
.....ATTTTGACCGCCAGCTTGTTG................................................................................................................................................................................................................................. 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........GACCGCCAGCTTGTTGAGCGTGG.......................................................................................................................................................................................................................... 23 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GATATTCAACGAGGAGGGCTCCT................... 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................GATCTGATATTCAACGAGGA........................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................ATTCAACGAGGAGGGCTCCTGCCC............... 24 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................TCTCGCTCTCGCTCTCTTTGAACGCAG.................................................. 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GATATTCAACGAGGAGGG........................ 18 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TTCAACGAGGAGGGCTCCTGCCCGC............. 25 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................................CTTGTGAGTGTGACACTGGCT.............................................................................................................................................. 21 3 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................CGTGTGCGTGTGACACTGG................................................................................................................................................ 19 2 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................CGTGTCAGTGTTACACCTGC............................................................................................................................................... 20 3 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................GAAGCACTCTACCAAGATGC............................................................................................................ 20 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..............................................TGTATGTGTGTGCGTGCGAGTGC...................................................................................................................................................................................... 23 1 5 0.20 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................CGTGTGAGTGTCACAGTTGCT.............................................................................................................................................. 21 3 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................CGTGTGAGCGTGACAGTTG................................................................................................................................................ 19 2 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................CGTCTGAGTGTTACACTTGCT.............................................................................................................................................. 21 3 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................CGTGTGAGTGTGACAGCTGCCA............................................................................................................................................. 22 3 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................AAGCTCCCAAGTTCTCCATC................................................................................................................... 20 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
........................................................................................CTTGTGAGTGTGACACCCGC............................................................................................................................................... 20 3 9 0.11 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................CGTGTGAGTGTGACGGTTGCT.............................................................................................................................................. 21 3 11 0.09 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................CTTGTGAGTGTGACAATTCC............................................................................................................................................... 20 3 12 0.08 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................GTGCGTGCGTGTGAGTGTG....................................................................................................................................................... 19 0 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
............................................................................................................................................................................................TCTTTGAACGCACCAGGAT............................................ 19 3 13 0.08 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........ACAGCCAGCTTGATGAGCTT............................................................................................................................................................................................................................ 20 3 15 0.07 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..................................................TGTGTGTGCGTGCGAGTGCA..................................................................................................................................................................................... 20 1 16 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........TCACTGCCAGCTTGATGAGC.............................................................................................................................................................................................................................. 20 3 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
......................................................................................................................................................................................................................TCAATAAGGAGGGCTCATG.................. 19 3 17 0.06 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................CGTGTGCGTGTGACAGCTGCA.............................................................................................................................................. 21 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................GTGTGTGTGCGTGCGTGC.................................................................................................................................................................. 18 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
........................................................................................CGTGTGCGTGTGACAGTTGCT.............................................................................................................................................. 21 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......TATCACAGCCAGCTTGTTG................................................................................................................................................................................................................................. 19 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TCGCTCTCGCTCTCGCTCTCTA........................................................... 22 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................TGTGTGTGCGTGCGTGCGTG............................................................................................................................................................... 20 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................GTGTGTGTGTGTGCGTGCG........................................................................................................................................................................................... 19 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................TGTGTGTGTGTGCGTGCGAG......................................................................................................................................................................................... 20 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

GTTGTTAAAACTGGCGGTCGAACAACTCGCATTCACACACACACACACACACACACACGCACGCTCACGCACACACACACGCACGCACGCACACTCACACTGTGAACGTTAATCGTTTCGAGGCTTCGAGAGATAGTTTTACGTTGACATTTGCAAAGCGATTGCGGAAGAGCGAGAGCGAGAGCGAGAGAAACTTGCGTCCACCTAGACTATAAGTTGCTCCTCCCGAGGACGGGCGACACGTTGTTCTG
**************************************************.(((..(((.(((((.((((.....((...((((.((((.................................)))).))))..))....)))).)))))...)))...........))).********************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR060678
9x140_testes_total
 V116
male body		 SRR060677
Argx9_ovaries_total
 M061
embryo
 SRR060675
140x9_ovaries_total
 SRR060654
160x9_ovaries_total
 SRR060679
140x9_testes_total
........................................................................................................................................................................................................................................CGGGCGAGACGTTGTTCAG 19 2 1 1.00 1 0 1 0 0 0 0 0
...........................................................................................CACTCACACTGTGAACGTTAA........................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
................................................................................................................................................................ATCGCGTAAGAGCGAGAGCGTGAGCG................................................................. 26 3 2 0.50 1 0 0 1 0 0 0 0
........................................................................................................................................................................AGAGCGAGAGCGAGAGCGAGAGCAA.......................................................... 25 1 10 0.10 1 0 0 0 1 0 0 0
............................................................ACGCTCACGCACACACACAC........................................................................................................................................................................... 20 0 10 0.10 1 0 0 0 0 1 0 0
..............................................................GCTCACGCACACACACACGCTC....................................................................................................................................................................... 22 1 11 0.09 1 0 0 0 0 0 1 0
..........................................................................................................................................................................AGCGAGAGCGAGAGCGAGAGA............................................................ 21 0 20 0.05 1 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12928:1167009-1167259 + dvi_8387 CAACAATT------TTG-----ACCGCCAGCTTGTTGAGC--GTAAGTGTGTGTGTGTGTG--------------------------------------TG------------------T--GTGT----------GTGCGT------GCGAGTGCGTGTG--TGTGTGC--G--TGCGTGCGTGTG------------AGTGTGA----------------------------------------------------------------CACTTGCAATTA-GCAAAGCTCCGAA--------------G-------CTCTCTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAA--------------------AATG-----------------------CAACTGTAAA-----------CGTT-TCGCTAA--------------------CGCCTTCTCGCT--C---------------------------------------------------------------------------------------------------------------------------TCGCT----C--T------------------C----GCTCTC-----T--T-T--G------AACGCAGGTGGATCTGATATTCAACGAGGAGGGCTCCTGCCCGCTGTGCAACAAGAC
droMoj3 scaffold_6473:13920494-13920734 - CTGCCATT------TTG-----ACCGACAGCTTGTTGAGC--GTAAGTT----------AGT--T---C-AG---------CCTCTCTGGCTACATGTGTGCTT--------------GTGT--GTGCC------------------------------TG--TGTGTCC--C--TGTGCGTGAGTG------------AGTGTGA----------------------------------------------------------------CACTTGCAATTA-GCAGAGCTTCAAA--------------G-------CTCTCAA-------------------------------C-----------------------------------------------ACC----A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATT-----------------------CAACACTAAC----------------------------------------------CGTCTCGCT--T---------------------------------------------------------------------------------------------------------------------------CCGCT----C--T------------------C----GCTCTC-----A--T-T--T------GACACAGGTGGATCTGATATTCAACGAGGAGGGCTCATGCCCGCTGTGCAACAAAAC
droGri2 scaffold_14853:8378351-8378598 + CAACCATT------TTG-----ACCGCCAGCTTGTTGAGC--GTAAGTTTCT------------AA---T----------GC--------------------GTGTGCG--------TGTGT--GTGTT------T------GTGTAT--A--------------------------------------------------TGCGG----------------------------------------------------------------TACTTGCAATTA-GCAAAGC----------------------GCTCTT--------------------------------------T-TGCTCTCTCTCTCTCTCTCGTCTCTCTCTTTCTCTCTTACCAAAACAAA----AAATGCATTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAAT---------------------------------------------------TGTCAACA--------------CTCGCG-----------------------------------------------------------------------------------------------------------CGCTC--TC----------------------TC--------------------ATTCAACACAGGTGGATCTGATATTCAACGAGGAGGGCTCCTGCCCGCTCTGCAATAAGAC
droWil2 scf2_1100000004909:4247486-4247808 - CGACGACC------GCC-----AGCGCCAGCTTGTTGAGC--GTGAGTTTCT--------------------------------------------------GTGTGTG--------TGTGT--GTGTG------T------GTGCA--TA------------TGTGTTT--T-----GTA--TG--------------------AT---------------------------------------------------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCG--------------------AGAAAGACAGAG------AG-------AGAGAGAGACAGTGAGAGTAAGCTCTCTAGCAATGCTAAACAAGGCTTACTCTAACTCCCTGC---TCTCTCTCTGTTCCTA--------------------GACCCCACCCCACCTCCCACCC---------------------------------------ACC----------------TACCTACCTACC--C---------------------------------------------------------------------------------------------------------------------------CCGCC----G--CCCCACTGTAACATCATTAT----TCAAACTATATATTCTCCTGCTTTACACCACAGGTGGATCTGATATTCAACGAGGAGGGCTCTTGCCCACTGTGCAACAAAAC
dp5 XL_group1a:7222917-7223172 + CCATATTT------TTG-----GCCGCCAGCTTGTTGAGC--GTGAGTT-CTG----------------------------TGTGT----------------TT--------------GTGT--GTGT--------GAGAG--------------------------------------AG----------GGAGTGCA--------------------------------------ACAGTGT------------------------------------TT-GCCAAAATTTACA--------------GTTATAAC--------------------------------------T-CCCCCACCCTCACTCAATCGTACTCCTGTTCCCCTCCCACGCAATCACTTGCTCACTGCGTATGTG---C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCTTTTTTTTCT--------------CTTTCT-----------------------------------------------------------------------------------------------------------CGCTC--TT----------------------GC--------------------CCGCGTCACAGGTGGATCTGATATTCAATGAGGAGGGGTCCTGCCCCCTTTGCAATAAGAC
droPer2 scaffold_13:1834416-1834679 + CCATATTT------TTG-----GCCGCCAGCTTGTTGAGC--GTGAGTT-CT----------------------------GTGTGT----------------TT--------------GTGT--GGGTGTG----T------GTGTGT--GAG--------------------------AG----------GGAGTGCA--------------------------------------ACAGTGT------------------------------------TT-GCAAAAATTTACA--------------GTTATAAC--------------------------------------TCCCCCCACCCTCACTCCATCGTACCCGTGTTCCCCTCCCACGCAATCACTTGCTCACTGCTTATGTG---C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCTTTT-TTTCT--------------CTTTCT-----------------------------------------------------------------------------------------------------------CGCTC--TT----------------------GC--------------------CCGCGTCACAGGTGGATCTGATATTCAATGAGGAGGGGTCCTGTCCCCTTTGCAATAAGAC
droAna3 scaffold_13337:8530466-8530660 - TGT---GT------G----------------------------------TGTGTGT----------------------------------------------GTGTGTG----------T--GTGTGTG------T------GTGAG------------TG--TGTGTTC--T--CTCGTAGGTGTG------------AGTGCGTATCTCAAAGA--TACGAAAAGTCCAATACAAATAGTTTTTAAAAAAAGATACGTGAAGGTGCTTCCGTTTCACTCTCCT------CT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCGCTCTCTCT--C---------------------------------------------------------------------------------------------------------------------------TCTCT----C--T------------------C----TCTCTC-----T--C-T--G-----------TCTCGAGTGTGACATTTAACAA------------------------------
droBip1 scf7180000396566:234400-234505 - TAA---GT------G----------------------------------GGCATGTGTGCG--------------------------------------TG------------------T--GTGT----------CTAGAT------GCGATTGTGCCTG--TGTGTGC--G--AGTGTGGGTATG------------AGTGTGT----------------------------------------------------------------GTCTCGCG---------AGTTTTT-----------------------------CA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACATTTAAT--------------------------TGAAAA
droKik1 scf7180000302696:884277-884419 + GCG----------------------------------------------TATGTGTGTGTG--------------------------------------TGTGTATGTG----------T--GTGTGTG------T------GTGTA------------TG--TGTGTGC--A-------GTGTGCA------------AATGCAA----------------------------------------------------------------TGTTTGCACTCAGCT------CGAGA--------------G-------CACTCAA-------------------------------T-----------------------------------------------TAG----A-------------------------------------------------------------------------------AA---------------------------------------------------------------------------------------------------------------------------------------------CGTT-AAGCTAA--------------------CG----------------------ACGACC--------------------------------------------------------------------------------------------------GCTGCTC---TCACT----CTTC------------------C----TCTCAC-----T--C-T------------------------------------------------------------------
droFic1 scf7180000453323:125026-125267 + TTC---TT------TTG-----GCCGCCAGCTTGTTGAGC--GTAAGT----------GGGAGGGGAATA----------GTGATA----------------TT--------------GTGT--GG----------------------TTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAAGCTATT-------CTAGTGCCAGATTTGAATACATTCG---TGTCAAGTTTAAAATGTCTTATAAATAACGA--AAAACTGGAGTAAATAA-------AAAAACAAA---------------------------------------------------------------------------------------------------------------------------CAGTAAA-------------------CAAA--------------------AC----------------------ATCTA--------------------------------------------------------------------------------------------------CTTTGTAC---CTAT------------------TCTTC---------------------------------------AAGGTGGATCTGATATTCAACGAGGAGGGCTCCTGCCCGCTATGCAACAAAAC
droEle1 scf7180000490996:895266-895472 + TAGCTAAG------TTGACGTCGCCGCTGCACTCTTGTGT--GTCAGT----------GTGT----------------------------------------GTGTGTG----------T--GTGTGTG------T------GTGTGTGTA--------------AGTGA--T--TGTGTA----TGAGTG--------CGAGTG------------------------------------CGT------------------------------------TT-A----------------------------------------AATTGAAAATTCTGCTAGGCGAAATGGGAATATCCCCCTTCCCTTTCCAATCCCCCCATACATTCCACCCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTAAACCCCT--C---------------------------------------------------------------------------------------------------------------------------TCGCT----C--C------------------C----TCCCCT-----T--T-T--G---------------------------------------------ACTGCA------------
droRho1 scf7180000779914:481247-481466 + AACCGAATTGAAAGTTTATGTCA---------------GC--GAAAA--------------------AT-GGCGGCTCTA-TCTGTCTGTG--------TGTGTGTGT----------------GTGTG----------TGT------GTGACGTTG------TGTGTGTATTAGTACGAATGTGTG------------AGTGCGCAACCCGACGTCA-------------------AATATGT------------------------------------TT-GAACAACTTTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATGCAA-------AATGCCAAA---------------------------------------------------------------------------------------------------------------------------CATTCTCCAACTTGTAGACGTG-GCGCTCT--------------------CGCCTCTCTT-TCCCC--------------CTTTCT------------------------------------------------------------------------------------------------------------------C------------------C----GCTTTC-----T--C-T--G---------------------------------------------------------------
droBia1 scf7180000298389:351406-351580 + TGT--------------------------------TGAGT--GTGTGT----------GTGT-----------------A-TCTGTGAGAGTGTGAGAGTGTGT--------------------------------------GTGTGT--GAG------AGTGTGTGTG------TGTGCGTGTGTG------------TGTGTGTA---------------------------------------------------TCTGTG---TAATGGCAGGATGCAACA------TGAAAATGGCGTGTGGCTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAACGTTT---------------------------TATT----------------------------------TGCTCGTTCTCTGGTACT--------------------------------------------------------------------------------------------------TTT-------------------C------------------CCTGCGCTCCT-----T--T-T--G--------------------------------------------------------------A
droTak1 scf7180000415704:939764-939881 - GATTGATT------TAA-----ATTGGCAAGTACTAAAGT--ATGTGTGTGTGTGT----------------------------------------------GTGTGTG----------T--GTGTGTG------T------GTG----TGTGTGTGTGTG--TGTGTGT--G--TGTG--------------------GGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGGGGCGGTGGAGCTTGCGATGTGCTAA---
droEug1 scf7180000409089:124732-124880 + CGC---AT------GTG----------------------------------TGTTTGAGTG--------------------------------------T--GTGTGTGTGTGTGTGTGTGT--GTGTGTGTGTGT------GTGTGT-------------------------------AG----------GGGGTGTG--------------------------------------GCAGCG-------------------------------------TA-GCAAAGG----------------------GTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------CCCCCCTCATAGACATCTAATGAGTGTTGG-----------------------------------------------------------------------------------------------------------------------------------G-TCCTTTA--------------------CA----------------------GTAACC--------------------------------------------------------------------------------------------------TCTCCTC---TC----------------------------------TCTCTC-----T--C-T------------------------------------------------------------------
dm3 chrX:4806519-4806825 + TTC---TT------TTG-----GCCGCCAGCTTGTTGAGC--GTGAGT----------GGGAGTGGGA------------------------------------------------------------------------GG------GCGAT--------------------------------------------------------------------------------------AGTGA--------------------------CACA------------------------------------GT---------------------------G-----------------------------------ATGTGCACTTGGCTACT-------TATTCGTTAGAACTATATGCATATATAATGTACAGCTT--------------------AGAA-------AAAAGG--TTTTTCGCATAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATAGTAGGTTGTATTAAAGTAAAATGGCATATC----AT------ATATAATGCCTTTCTGATGGAAGGTAACCCGCGGTAGAAGGCAAGCCCTTTGCAACTAATGTT----CGAT----TTGTTTCTTT---------------------------------------AAGGTGGATCTGATATTCAACGAGGAGGGCTCCTGCCCGCTATGCAACAAAAC
droSim2 3r:6225109-6225290 + GTG----------------------------------------------TGTGTGTGTGTG--------------------------------------TG------------------T--GTGC----------GAAGGG------GCGACTGTGTGCG--TGGGTGC--T--TGTGTGAGCATA------------AGTGTGG----------------------------------------------------------------CACT------CTGCC------C-----------------------------------------------------------------------ACG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGCCTGCACTTCTAGCTCTGCGCCGA--------------------GAACGAGCCGAGCCCCCCGCCCCAATT---------------------------CGAC---CCCCAGCTGGCTGCCCCAGCCCCTTCTTCCC--T---------------------------------------------------------------------------------------------------------------------------TCGCT----C--T-------------------------------------------------------------------------------------------------------CAC
droSec2 scaffold_0:20611118-20611305 - GTG----------------------------------------------TGTGTGTGTGTG--TTG---T----------GT------------------------------------------GTGTG----------CGT------GTGCTCG-----------------C----------------------------TGTGTT---------------------------------------------------TGTGCG---GAACATCAACTAATATTG------TCAACGCAACATTCGACTTGTTATCCC--------------------------------------TTCCGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-GCCTGACTTC-----------------------CTCT---TCTTAATTTCGTT-----------------------------------TTGAACTCCTCGACGTCAGCGATTTTGTC----------------GGCCTTCTCGCT--T---------------------------------------------------------------------------------------------------------------------------TCGCT----C--T------------------C----TCTCTC-----T--C-T------------------------------------------------------------------
droYak3 X:3638838-3639157 - TTC---TT------TTG-----GCCGCCAGCTTGTTGAGC--GTGAGT----------GGGAGTGGGA------------------------------------------------------------------------GG------GCGAT--------------------------------------------------------------------------------------AGTGC--------------------------CCCA------------------------------------GT---------------------------G-----------------------------------ATGTCCACTTGGCTACTGGCTACCTAATCACCAGATCTATATGTATATG---TGTAGTGCTT--------------------AGAAGGACAGGAAAAAGTATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCT--------------TTTTTTTGATAAGTTCT-TAAAAGTACTATGGCATATCTACCATATATGCATATAAAACCTTTTGAATGGGAGA--GCC--TAGCAAGAGGCAAGCACTTT-CAACTGATGCT----CTAT----TTGTAACTTC---------------------------------------AAGGTGGATCTAATATTCAACGAGGAGGGCTCCTGCCCGCTATGCAACAAAAC
droEre2 scaffold_4929:8551182-8551373 + GCT---GA------TTG-----ATCA-----------AGTGTGTGGGT----------GTG--------------------------------------T--GCGTGTG----------T--GTGTGTG------T------GTGTG------------TG--TGTGTGT--C--CGTGTGCGTGTG------------CGTGTGTC---------------------------------------------------TGGCTG---GGGCACAAACAAAA-----------------------------------------------------------------------------------------------------------------------------------ACCATA--T----------------------------------------------------G--TTTCT--------------------------------------------------C-GCCCGACTCC-----------------------CGCACGCACTCACTCACAAA-----------------------------------CCGAATTACTC----------ACTCAGCC----------------CGCCTCCTC---------------------------------------------------------------------------------------------------------------------------------TCGCTCACTC--T------------------T----GCTTTC-----G--T-T--G---------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
CAACAATT------TTG-----ACCGCCAGCTTGTTGAGC--GTAAGTGTGTGTGTGTGTG--------------------------------------TG------------------T--GTGT----------GTGCGT------GCGAGTGCGTGTG--TGTGTGC--G--TGCGTGCGTGTG------------AGTGTGA----------------------------------------------------------------CACTTGCAATTA-GCAAAGCTCCGAA--------------G-------CTCTCTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAA--------------------AATG-----------------------CAACTGTAAA-----------CGTT-TCGCTAA--------------------CGCCTTCTCGCT--C---------------------------------------------------------------------------------------------------------------------------TCGCT----C--T------------------C----GCTCTC-----T--T-T--G------AACGCAGGTGGATCTGATATTCAACGAGGAGGGCTCCTGCCCGCTGTGCAACAAGACSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....ATT------TTG-----ACCGCCAGCTTGTTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000000000000000000002000000000000000000000000000000000000000000
................G-----ACCGCCAGCTTGTTGAGC--GTGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000001000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATTCAACGAGGAGGGCTCCT...................2311.001000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTGATATTCAACGAGGA...........................2011.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCAACGAGGAGGGCTCCTGCCC...............2411.001000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--C---------------------------------------------------------------------------------------------------------------------------TCGCT----C--T------------------C----GCTCTC-----T--T-T--G------AACGCAG..................................................2711.001100000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATTCAACGAGGAGGG........................1811.001000000000000010000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAACGAGGAGGGCTCCTGCCCGC.............2511.001000000000000000000000000000000000000010000000000000000000000000
............................................................................................................................................................................G--TGCGTGCGTGTG------------AGTGTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19130.081000000000000000100000000000000000000000000000000000000000000000
.......................................................................................................................T--GTGT----------GTGCGT------GCGAGTGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20160.061000000000000000000001000000000000000000000000000000000000000000
..............................................................................................................................................................GTG--TGTGTGC--G--TGCGTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000000000000100000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCT--C---------------------------------------------------------------------------------------------------------------------------TCGCT----C--T------------------C----GCTCTC-----T--A-...................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................TG--TGTGTGC--G--TGCGTGCGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
..........................................................GTG--------------------------------------TG------------------T--GTGT----------GTGCGT------GCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000000000000000000000000000000100
...........................................................TG--------------------------------------TG------------------T--GTGT----------GTGCGT------GCGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000000000000000000000000000000000000010
droMoj3
CTGCCATT------TTG-----ACCGACAGCTTGTTGAGC--GTAAGTT----------AGT--T---C-AG---------CCTCTCTGGCTACATGTGTGCTT--------------GTGT--GTGCC------------------------------TG--TGTGTCC--C--TGTGCGTGAGTG------------AGTGTGA----------------------------------------------------------------CACTTGCAATTA-GCAGAGCTTCAAA--------------G-------CTCTCAA-------------------------------C-----------------------------------------------ACC----A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATT-----------------------CAACACTAAC----------------------------------------------CGTCTCGCT--T---------------------------------------------------------------------------------------------------------------------------CCGCT----C--T------------------C----GCTCTC-----A--T-T--T------GACACAGGTGGATCTGATATTCAACGAGGAGGGCTCATGCCCGCTGTGCAACAAAACSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............................................................................................................................................................................TGTGCGTGAGTG------------AGTGTGA----------------------------------------------------------------CA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002002000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATCTGATATTCAACGAGGAGGGC.......................2611.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCTCATGCCCGCTGTGCAACA....2311.001100000
droGri2
CAACCATT------TTG-----ACCGCCAGCTTGTTGAGC--GTAAGTTTCT------------AA---T----------GC--------------------GTGTGCG--------TGTGT--GTGTT------T------GTGTAT--A--------------------------------------------------TGCGG----------------------------------------------------------------TACTTGCAATTA-GCAAAGC----------------------GCTCTT--------------------------------------T-TGCTCTCTCTCTCTCTCTCGTCTCTCTCTTTCTCTCTTACCAAAACAAA----AAATGCATTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAAT---------------------------------------------------TGTCAACA--------------CTCGCG-----------------------------------------------------------------------------------------------------------CGCTC--TC----------------------TC--------------------ATTCAACACAGGTGGATCTGATATTCAACGAGGAGGGCTCCTGCCCGCTCTGCAATAAGACSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
CGACGACC------GCC-----AGCGCCAGCTTGTTGAGC--GTGAGTTTCT--------------------------------------------------GTGTGTG--------TGTGT--GTGTG------T------GTGCA--TA------------TGTGTTT--T-----GTA--TG--------------------AT---------------------------------------------------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCG--------------------AGAAAGACAGAG------AG-------AGAGAGAGACAGTGAGAGTAAGCTCTCTAGCAATGCTAAACAAGGCTTACTCTAACTCCCTGC---TCTCTCTCTGTTCCTA--------------------GACCCCACCCCACCTCCCACCC---------------------------------------ACC----------------TACCTACCTACC--C---------------------------------------------------------------------------------------------------------------------------CCGCC----G--CCCCACTGTAACATCATTAT----TCAAACTATATATTCTCCTGCTTTACACCACAGGTGGATCTGATATTCAACGAGGAGGGCTCTTGCCCACTGTGCAACAAAACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................................................................................................................................GTGCA--TA------------TGTGTTT--T-----GTA--TG--------------------AT---------------------------------------------------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCG--------------------A.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGACAGAG------AG-------AGAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.15300030
dp5
CCATATTT------TTG-----GCCGCCAGCTTGTTGAGC--GTGAGTT-CTG----------------------------TGTGT----------------TT--------------GTGT--GTGT--------GAGAG--------------------------------------AG----------GGAGTGCA--------------------------------------ACAGTGT------------------------------------TT-GCCAAAATTTACA--------------GTTATAAC--------------------------------------T-CCCCCACCCTCACTCAATCGTACTCCTGTTCCCCTCCCACGCAATCACTTGCTCACTGCGTATGTG---C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCTTTTTTTTCT--------------CTTTCT-----------------------------------------------------------------------------------------------------------CGCTC--TT----------------------GC--------------------CCGCGTCACAGGTGGATCTGATATTCAATGAGGAGGGGTCCTGCCCCCTTTGCAATAAGACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATGAGGAGGGGTCCTGCCCCCTTTG.........2711.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGTCACAGGTGGATCTGA........................................2011.0010100000000
droPer2
CCATATTT------TTG-----GCCGCCAGCTTGTTGAGC--GTGAGTT-CT----------------------------GTGTGT----------------TT--------------GTGT--GGGTGTG----T------GTGTGT--GAG--------------------------AG----------GGAGTGCA--------------------------------------ACAGTGT------------------------------------TT-GCAAAAATTTACA--------------GTTATAAC--------------------------------------TCCCCCCACCCTCACTCCATCGTACCCGTGTTCCCCTCCCACGCAATCACTTGCTCACTGCTTATGTG---C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCTTTT-TTTCT--------------CTTTCT-----------------------------------------------------------------------------------------------------------CGCTC--TT----------------------GC--------------------CCGCGTCACAGGTGGATCTGATATTCAATGAGGAGGGGTCCTGTCCCCTTTGCAATAAGACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
TGT---GT------G----------------------------------TGTGTGT----------------------------------------------GTGTGTG----------T--GTGTGTG------T------GTGAG------------TG--TGTGTTC--T--CTCGTAGGTGTG------------AGTGCGTATCTCAAAGA--TACGAAAAGTCCAATACAAATAGTTTTTAAAAAAAGATACGTGAAGGTGCTTCCGTTTCACTCTCCT------CT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCGCTCTCTCT--C---------------------------------------------------------------------------------------------------------------------------TCTCT----C--T------------------C----TCTCTC-----T--C-T--G-----------TCTCGAGTGTGACATTTAACAA------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................................................................................................TGTGTG----------T--GTGTGTG------T------GTGAG------------TG--TGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.255500000
...........................................................................................................TG----------T--GTGTGTG------T------GTGAG------------TG--TGTGTTC--G--............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2690.222000002
.......................................................................................................TGTGTG----------T--GTGTGTG------T------GTGAG------------TG--TGTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26190.214100003
.GT---GT------G----------------------------------TGTGTGT----------------------------------------------GTGTGTG----------T--GTGTGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000001
......GT------G----------------------------------TGTGTGT----------------------------------------------GTGTGTG----------T--GTGTGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000001
....................................................GTGT----------------------------------------------GTGTGTG----------T--GTGTGTG------T------GTGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000001
..........................................................................................................GTG----------T--GTGTGTG------T------GTGAG------------T...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051010000
........................................................................................................GTGTG----------T--GTGTGTG------T------GTGAG------------TG--TG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000001
............................................................................................................G----------T--GTGTGTG------T------GTGAG------------TG--TGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051100000
droBip1
TAA---GT------G----------------------------------GGCATGTGTGCG--------------------------------------TG------------------T--GTGT----------CTAGAT------GCGATTGTGCCTG--TGTGTGC--G--AGTGTGGGTATG------------AGTGTGT----------------------------------------------------------------GTCTCGCG---------AGTTTTT-----------------------------CA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACATTTAAT--------------------------TGAAAASizeHit CountTotal NormTotal
No Reads
droKik1
GCG----------------------------------------------TATGTGTGTGTG--------------------------------------TGTGTATGTG----------T--GTGTGTG------T------GTGTA------------TG--TGTGTGC--A-------GTGTGCA------------AATGCAA----------------------------------------------------------------TGTTTGCACTCAGCT------CGAGA--------------G-------CACTCAA-------------------------------T-----------------------------------------------TAG----A-------------------------------------------------------------------------------AA---------------------------------------------------------------------------------------------------------------------------------------------CGTT-AAGCTAA--------------------CG----------------------ACGACC--------------------------------------------------------------------------------------------------GCTGCTC---TCACT----CTTC------------------C----TCTCAC-----T--C-T------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TTC---TT------TTG-----GCCGCCAGCTTGTTGAGC--GTAAGT----------GGGAGGGGAATA----------GTGATA----------------TT--------------GTGT--GG----------------------TTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAAGCTATT-------CTAGTGCCAGATTTGAATACATTCG---TGTCAAGTTTAAAATGTCTTATAAATAACGA--AAAACTGGAGTAAATAA-------AAAAACAAA---------------------------------------------------------------------------------------------------------------------------CAGTAAA-------------------CAAA--------------------AC----------------------ATCTA--------------------------------------------------------------------------------------------------CTTTGTAC---CTAT------------------TCTTC---------------------------------------AAGGTGGATCTGATATTCAACGAGGAGGGCTCCTGCCCGCTATGCAACAAAACSizeHit CountTotal NormTotal
No Reads
droEle1
TAGCTAAG------TTGACGTCGCCGCTGCACTCTTGTGT--GTCAGT----------GTGT----------------------------------------GTGTGTG----------T--GTGTGTG------T------GTGTGTGTA--------------AGTGA--T--TGTGTA----TGAGTG--------CGAGTG------------------------------------CGT------------------------------------TT-A----------------------------------------AATTGAAAATTCTGCTAGGCGAAATGGGAATATCCCCCTTCCCTTTCCAATCCCCCCATACATTCCACCCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTAAACCCCT--C---------------------------------------------------------------------------------------------------------------------------TCGCT----C--C------------------C----TCCCCT-----T--T-T--G---------------------------------------------ACTGCA------------SizeHit CountTotal NormTotal
No Reads
droRho1
AACCGAATTGAAAGTTTATGTCA---------------GC--GAAAA--------------------AT-GGCGGCTCTA-TCTGTCTGTG--------TGTGTGTGT----------------GTGTG----------TGT------GTGACGTTG------TGTGTGTATTAGTACGAATGTGTG------------AGTGCGCAACCCGACGTCA-------------------AATATGT------------------------------------TT-GAACAACTTTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATGCAA-------AATGCCAAA---------------------------------------------------------------------------------------------------------------------------CATTCTCCAACTTGTAGACGTG-GCGCTCT--------------------CGCCTCTCTT-TCCCC--------------CTTTCT------------------------------------------------------------------------------------------------------------------C------------------C----GCTTTC-----T--C-T--G---------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
TGT--------------------------------TGAGT--GTGTGT----------GTGT-----------------A-TCTGTGAGAGTGTGAGAGTGTGT--------------------------------------GTGTGT--GAG------AGTGTGTGTG------TGTGCGTGTGTG------------TGTGTGTA---------------------------------------------------TCTGTG---TAATGGCAGGATGCAACA------TGAAAATGGCGTGTGGCTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAACGTTT---------------------------TATT----------------------------------TGCTCGTTCTCTGGTACT--------------------------------------------------------------------------------------------------TTT-------------------C------------------CCTGCGCTCCT-----T--T-T--G--------------------------------------------------------------ASizeHit CountTotal NormTotal
No Reads
droTak1
GATTGATT------TAA-----ATTGGCAAGTACTAAAGT--ATGTGTGTGTGTGT----------------------------------------------GTGTGTG----------T--GTGTGTG------T------GTG----TGTGTGTGTGTG--TGTGTGT--G--TGTG--------------------GGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGGGGCGGTGGAGCTTGCGATGTGCTAA---SizeHit CountTotal NormTotal
No Reads
droEug1
CGC---AT------GTG----------------------------------TGTTTGAGTG--------------------------------------T--GTGTGTGTGTGTGTGTGTGT--GTGTGTGTGTGT------GTGTGT-------------------------------AG----------GGGGTGTG--------------------------------------GCAGCG-------------------------------------TA-GCAAAGG----------------------GTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------CCCCCCTCATAGACATCTAATGAGTGTTGG-----------------------------------------------------------------------------------------------------------------------------------G-TCCTTTA--------------------CA----------------------GTAACC--------------------------------------------------------------------------------------------------TCTCCTC---TC----------------------------------TCTCTC-----T--C-T------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
TTC---TT------TTG-----GCCGCCAGCTTGTTGAGC--GTGAGT----------GGGAGTGGGA------------------------------------------------------------------------GG------GCGAT--------------------------------------------------------------------------------------AGTGA--------------------------CACA------------------------------------GT---------------------------G-----------------------------------ATGTGCACTTGGCTACT-------TATTCGTTAGAACTATATGCATATATAATGTACAGCTT--------------------AGAA-------AAAAGG--TTTTTCGCATAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATAGTAGGTTGTATTAAAGTAAAATGGCATATC----AT------ATATAATGCCTTTCTGATGGAAGGTAACCCGCGGTAGAAGGCAAGCCCTTTGCAACTAATGTT----CGAT----TTGTTTCTTT---------------------------------------AAGGTGGATCTGATATTCAACGAGGAGGGCTCCTGCCCGCTATGCAACAAAACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGATATTCAACGAGGAGGGCTCC....................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGAGGAGGGCTCCTGCCCGCTATGC........2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAATGTT----CGAT----TTGTTTCTTT---------------------------------------AAG..................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTT----CGAT----TTGTTTCTTT---------------------------------------A....................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAACGAGGAGGGCTCCTGC.................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATCTGATATTCAACGAGGAGGGC.......................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGTAACCCGCGGTAGAAGGCAA.....................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCAACGAGGAGGGCTCCTGCCCGCTA...........2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGCATAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATAGTAGG......................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAATGTT----CGAT----TTGTTTCTTT---------------------------------------.....................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATTCAACGAGGAGGGC.......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................GTGAGT----------GGGAGTGGGA------------------------------------------------------------------------GG------GCGAT--------------------------------------------------------------------------------------AA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAACGAGGAGGGCTCCTGCCCGC.............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGATATTCAACGAGGAGGG........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
...........................CAGCTTGTTGAGC--GTGAGT----------GG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACTAATGTT----CGAT----TTGTTTCTTT---------------------------------------A....................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGTAGAAGGCAAGCCCTT...............................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TGTACAGCTT--------------------AGAA-------AAAAGG--T..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGAAGGTAACCCGCGGTAGAAGG........................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTAACCCGCGGTAGAAGGCA......................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAATGTT----CGAT----TTGTTTCT..............................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.................................GTTGAGC--GTGAGT----------GGGAAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2050.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
droSim2
GTG----------------------------------------------TGTGTGTGTGTG--------------------------------------TG------------------T--GTGC----------GAAGGG------GCGACTGTGTGCG--TGGGTGC--T--TGTGTGAGCATA------------AGTGTGG----------------------------------------------------------------CACT------CTGCC------C-----------------------------------------------------------------------ACG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGCCTGCACTTCTAGCTCTGCGCCGA--------------------GAACGAGCCGAGCCCCCCGCCCCAATT---------------------------CGAC---CCCCAGCTGGCTGCCCCAGCCCCTTCTTCCC--T---------------------------------------------------------------------------------------------------------------------------TCGCT----C--T-------------------------------------------------------------------------------------------------------CACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.TG----------------------------------------------TGTGTGTGTGTG--------------------------------------TG------------------T--GTGC----------G..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100000000000100000
droSec2
GTG----------------------------------------------TGTGTGTGTGTG--TTG---T----------GT------------------------------------------GTGTG----------CGT------GTGCTCG-----------------C----------------------------TGTGTT---------------------------------------------------TGTGCG---GAACATCAACTAATATTG------TCAACGCAACATTCGACTTGTTATCCC--------------------------------------TTCCGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-GCCTGACTTC-----------------------CTCT---TCTTAATTTCGTT-----------------------------------TTGAACTCCTCGACGTCAGCGATTTTGTC----------------GGCCTTCTCGCT--T---------------------------------------------------------------------------------------------------------------------------TCGCT----C--T------------------C----TCTCTC-----T--C-T------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
TTC---TT------TTG-----GCCGCCAGCTTGTTGAGC--GTGAGT----------GGGAGTGGGA------------------------------------------------------------------------GG------GCGAT--------------------------------------------------------------------------------------AGTGC--------------------------CCCA------------------------------------GT---------------------------G-----------------------------------ATGTCCACTTGGCTACTGGCTACCTAATCACCAGATCTATATGTATATG---TGTAGTGCTT--------------------AGAAGGACAGGAAAAAGTATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCT--------------TTTTTTTGATAAGTTCT-TAAAAGTACTATGGCATATCTACCATATATGCATATAAAACCTTTTGAATGGGAGA--GCC--TAGCAAGAGGCAAGCACTTT-CAACTGATGCT----CTAT----TTGTAACTTC---------------------------------------AAGGTGGATCTAATATTCAACGAGGAGGGCTCCTGCCCGCTATGCAACAAAACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................GCTTGTTGAGC--GTGAGT----------GGGAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
droEre2
GCT---GA------TTG-----ATCA-----------AGTGTGTGGGT----------GTG--------------------------------------T--GCGTGTG----------T--GTGTGTG------T------GTGTG------------TG--TGTGTGT--C--CGTGTGCGTGTG------------CGTGTGTC---------------------------------------------------TGGCTG---GGGCACAAACAAAA-----------------------------------------------------------------------------------------------------------------------------------ACCATA--T----------------------------------------------------G--TTTCT--------------------------------------------------C-GCCCGACTCC-----------------------CGCACGCACTCACTCACAAA-----------------------------------CCGAATTACTC----------ACTCAGCC----------------CGCCTCCTC---------------------------------------------------------------------------------------------------------------------------------TCGCTCACTC--T------------------T----GCTTTC-----G--T-T--G---------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............................................................................................................................................GTGTG------------TG--TGTGTGT--C--CGTGTGCGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010000

Generated: 05/17/2015 at 03:39 AM