ID:

dvi_8306

 Coordinate:

scaffold_12928:578294-578444 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-9.2 -9.2 -9.2

Flybase annnotation

CDS [Dvir\GJ16739-cds]; exon [dvir_GLEANR_17245:3]; intron [Dvir\GJ16739-in]

Repeatable elements

NameClassFamilyStrand
Gypsy8-I_Dpse-intLTRGypsy+
TART_DVLINEJockey+

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AGCAGAACAACTGGCAGCGCCGTCAACCTAATGAGCAGCGCGCCCGCATACTGTGGCAACGCTGCCACTCGCAAACCTAGCACAGGAGGCAATCAGCGTAATCTCAAGGAGCGCGAACGTTCGACGACTGCCGCTTTAGCCACGGATCAGCCAAAGCAGCAACAACTGCAGCAAAAGCAACAACAACAACAACAACAACAGCAGCAGCAGCAGACACGCTTGGCAAACGCCTCGCATCTATTTGACCTTGA
*******************************************************************************************...((((((.((((...(((((....))))))).)).)).))))..........********************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 M061
embryo
 SRR060682
9x140_0-2h_embryos_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060660
Argentina_ovaries_total
 SRR060665
9_females_carcasses_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060663
160_0-2h_embryos_total
 SRR060679
140x9_testes_total
 V116
male body		 M027
male body		 M028
head
 SRR060667
160_females_carcasses_total
 SRR060672
9x160_females_carcasses_total
 SRR060677
Argx9_ovaries_total
 SRR060681
Argx9_testes_total
 SRR060687
9_0-2h_embryos_total
 SRR060688
160_ovaries_total
 SRR060666
160_males_carcasses_total
 SRR060656
9x160_ovaries_total
 V047
embryo
 SRR060670
9_testes_total
 SRR060664
9_males_carcasses_total
 SRR060675
140x9_ovaries_total
 SRR060680
 9xArg_testes_total
...........................................................................................ATCAGCGTAATCTCAAGGAGCG.......................................................................................................................................... 22 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................GTTCGACGACTGCCGCTTTAGCCACGG.......................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................TTGGCAAACGCCTCGCATCTATTTGACC.... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................AATGAGCAGCGCGCCCGCATACTGTGGCA................................................................................................................................................................................................. 29 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................GCAGCAGACACGCTTGGCA.......................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................AGCCACGGATCAGCCAAAGCAGCAA......................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................GTCAACCTAATGAGCAGCGCGCCCGC............................................................................................................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.GCAGAACAACTGGCAGCGCCGTCAAC................................................................................................................................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................GCCGCTTTAGCCACGGATCAGCCAAA................................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................TCGACGACTGCCGCTTTAGCCACGGATC....................................................................................................... 28 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
AGCAGAACAACTGGCAGCGC....................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................AGGAGCGCGAACGTGCGACGACT.......................................................................................................................... 23 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................GCCGTCAACCTAATGAGCAGC.................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................GCCACGGATCAGCCAAAGCAGCAA......................................................................................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................GGCAATCAGCGTAATCTCA................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................TGCCGCTTTAGCCACGGATCAGCCAAA................................................................................................ 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................GCAGCAGCAGCAGACACGCTTGGC........................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................GAACGTTCGACGACTGCCGCTTT.................................................................................................................. 23 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................CCCGCATACTGTGGCAACGCT............................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................AGCACAGGAGGCAATCAGCGT........................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................CAGGAGGCAATCAGCGTAATCT................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................GTCAACCTAATGAGCAGCGC.................................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........AACTGGCAGCGCCGTCAACCTAATGA......................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................TTGGCAAACGCCTCGCATCT............ 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................CGACGACTGCCGCTTTAGCCAC............................................................................................................ 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................AATGAGCAGCGCGCCCGCAT.......................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................AGCCACGGATCAGCCAAA................................................................................................ 18 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................GTCAACCTAATGAGCAGC.................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................GGCAATCAGCGTAATCTCAAGGAGCGC......................................................................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................AGCCACGGATCAGCCAAAGC.............................................................................................. 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................CGCTTTAGCCACGGATCAGCCAA................................................................................................. 23 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TCAAGGAGCGCGAACGTT.................................................................................................................................. 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....GAACAACTGGCAGCGCCGT.................................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................GACTGCCGCTTTAGCCACGGATC....................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................TAATCTCAAGGAGCGCGAACGTT.................................................................................................................................. 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................GCGAACGTGCGACGACTGCC....................................................................................................................... 20 1 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................TACTCTGGCAACACTGCGACT...................................................................................................................................................................................... 21 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................TGCGTAACCGCAAGGAGCG.......................................................................................................................................... 19 3 12 0.17 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0
.....................................................................................................................................................................................................ACAGCAGCAGCAGCAGACA................................... 19 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................CAACAACAGCAGCAGCAGCA....................................... 20 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0
........................................................................................................................................................................CAGCAAAAGCAACAACAACAACA............................................................ 23 0 15 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...........................................................................................................................................................................................AACAACAACAACAGCAGCAGCAGCA....................................... 25 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.......................................................................................................................................................................................CAACAACAACAACAACAGCAGCAGCAGCA....................................... 29 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................AACAACAACAACAACAGCAGCAGCAGC........................................ 27 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................AACAACAACAGCAGCAGCA.......................................... 19 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.............................................................................................................................................................................................CAACAACAACAGCAGCAGCAGC........................................ 22 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................AAAGCAACAACAACAACAACAA........................................................ 22 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................CAACAACAGCAGCAGCAGC........................................ 19 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................AACAACAACAACAACAACAGCAGC.............................................. 24 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.........................................................................................................................................................................................ACAACAACAACAACAGCAGCAGCAGC........................................ 26 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................ACAACAACAGCAGCAGCAGC........................................ 20 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

TCGTCTTGTTGACCGTCGCGGCAGTTGGATTACTCGTCGCGCGGGCGTATGACACCGTTGCGACGGTGAGCGTTTGGATCGTGTCCTCCGTTAGTCGCATTAGAGTTCCTCGCGCTTGCAAGCTGCTGACGGCGAAATCGGTGCCTAGTCGGTTTCGTCGTTGTTGACGTCGTTTTCGTTGTTGTTGTTGTTGTTGTTGTCGTCGTCGTCGTCTGTGCGAACCGTTTGCGGAGCGTAGATAAACTGGAACT
**********************************************************************************************************...((((((.((((...(((((....))))))).)).)).))))..........******************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total V047
embryo
 SRR060657
140_testes_total
 SRR060659
Argentina_testes_total
 SRR060679
140x9_testes_total
..............................................................................................TCGCATTAGAGTCCCACGCG......................................................................................................................................... 20 2 1 1.00 1 1 0 0 0
............................................................................................................................................................................................................................ACCCTTTGCGGACCATAGA............ 19 3 17 0.06 1 0 1 0 0
..........................................................................................................................................................................CGTTTTCGTTGTTGTTGTTG............................................................. 20 0 20 0.05 1 0 0 1 0
.........................................................................................................................................................................TCGTTTTCGTTGTTGTTGTTG............................................................. 21 0 20 0.05 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12928:578244-578494 + dvi_8306 AGCAG--AACAACTGGCAGC------------------GCCGTCAACCTAAT---------G----------------------------------------------------------------------------------------------------------------------AG---------------------------------------------------------------------------------------------CAGCGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCGCATACTGTGGCAACGCTGCCACTCGCAAA-------------------------CCT---------------AGCACAGGAG-GCAATCAGCGTAATCTCA-------------------------AGGAGCGCGA---------------------------A----CG----TTCGAC----------------------------------------------------------------------GACTGCCGCTTTAGCCAC----------------GGAT-CAGC--CAAAGCAGCAACAACTGCA---------------------GCA---A------AAG---CAACAACAACA------------------------------ACA-----------ACAACAACAGCAG--------------------CAGCAG---------------CAGACACGC--TTGGC--------------------------A--------------------------A------ACGC-C-TCGCATCTA------TTTGACCTTGA
droMoj3 scaffold_6328:3889785-3890048 + AGCAG-CAACATC-TACGAC------------------AGCAGCAAC----------------------------------------------------------------------------------------------------------------------------GT---CGCCAG---------------------------------------------C---AACTG------------------------CAG------------------CAG------------------------------------------------------------------------------------CAGCAGTTGCTCCCGCAGTGGTG-CAGCTGCAGCTGAT-------------------------------------------------------------------------------------------------------------TAGCAACA--------------------------------------------A----------------------TGGCACCT---------------TGCCCAGGA--GCAGTCCGCGTAAGCT-----------------GCTCCTC--GAC-----TCTGGCTCA---------------------GCGACGT--TGACGCG--TCAGAG--------CAA-----------------------------------------------------------------------------------------------------GCAGCAGCAGCA------------------------GCA---A------CAG---CAACAGCAACA------------------------------GCA-----------GCAACAGCAGCAG--------------------C---------------AAAATCTGT-GCGCTTTGG-CTAAGGTCTCCA----GCAGCATTGAGT---------------------------------------------------------TGGCGT--T
droGri2 scaffold_15110:12973422-12973666 + AACAG-CAACAAC-AGCATC------------------AGCAAGAGC------------AGC----------------------------------------------------------------------------------------------------------------------A---------------------------------------------------------------------------------------A---------------------------------------------------------------------------------------------------------------------------------------AATGTAATAATTGCAAAGCAGTTTGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C----------GCAGGTGCGCCACCCGCCTTTTGTCGAGGACCTGAAC--CTGCAACTT--AACCGGCTGCCGCCTCAAAA--------------------------------------------GCGATG---------------------------------------AG--------------------------------CATGGCTGA---------------------TAAAGCAGCAACAGCAACA------------------GTA---A------CAG---CAATAACAACA------------------------------AC-AA-------------TAACAA---------------CAACAACA-----GT------------ATCCGAT--GC--TGG-----------------GCA------------------------------------------ACGT-C-TCGTATTTAATGCATTTGATCCTTGA
droWil2 scf2_1100000004511:733497-733707 + AACAG--GCCAAC-TGGAAG------------------ACCGGCAAC----------------------------------------------------------------------------------------------------------------------------ATTATC---AA------------------------------------------CAGC---CACTG---------------------------------------------GAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACCACCACCGCCGCC---------------ACCGGCAAA-------------------------TCCTGCTCATGAGAATGTAC-GCAGTTG-G---------------------------CTAAGGAAAATT-GCAGAAATCCAA--------------------------------CG----TACAGCCGAAC-G--------TCA------------------------------------------GCAA-----------------------CAGCAACAAA---------------------AAGAGCAGCAGCAGCAGCA------------------GCA---G------------CAGCAACAACA------------------ACA---------AC-AG-------------CAGCAG---------------CAACAACA-----G---------------------------------------------------------------------------------------------------------------------------C
dp5 XR_group6:8997490-8997702 + GGCCG-CCGCCGC-CGTGGCCGCAGCAGCCG-------CCCAACAGC------------AGC----------------------------------------------------------------------------------------------------------------------AG---CAGGTCCACCAGCACCAGCAACAGC------------------------------------AGCAGCAAC------------------------------------------------------------------------------------------------------------AACAGC---------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGGTGCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CC------------------------ACCAGCAGCAGC--------------------------------AGCAGGCGG---------------------CGCACCAGCACCAGCAGCAACA---------------GCA---G------------CAGCAGCAA---------------------CA---------AC-AA-------------CAGCAG---------------CAGCAACA-----GC-----------------------------------------------------ATGCCG--------------CCGCCGTA--G------CCGC-C-TCGCATCCG------CATGCCCATGC
droPer2 scaffold_24:152654-152862 - GGGAG--AGCAGC-AGCAGC------------------AGCAGCAGC------------AG----------------------------------------------------------------------------------------------------------------------------------------------------------------------C---GGCGG---------------------------------------------CGGCACA---------GCAGGAGACATTTGCGGCTGACGTTGATGATGAGCATAACTTTACAACTTCCGCTGAACCAACAGCAACAGC---------------------------------------------------------------------------------------------------------------------------------------------------------AGCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCA------------------------GCACCATCAGCAGTGAC--------------------------------AGT---------------------------------GGCAACAGCAACA------------------GCA---A------CAG---CAGCAGCAGGA------------------------------AC-AG-------------CAGCAA---------------CAGCAACA-----GC--------------------------------------------------G----------------------TTG-----------------C-A-C--------------ATTAAGCCGGA
droAna3 scaffold_13340:7851160-7851366 - AGCAG-CCTCAGC-CGCGTC------------------CGCAGCGAC----------------------------------------------------------------------------------------------------------------------------GTTATA---TG-------------------------------------------------------------------------------------------CGCAGCGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACCGCTGCC---------------AGCGTCACCCA------------------------GCTGCTCTCCGAAAGCTGCAACAGTCT-G---------------------------CTGCAGCGGTTTCGAAGGAATCCGA---------------------------G----CG----AACGACCTGATAA--------TAA------------------------------------------ACAG-----------------------CATCAGCAGC---------------------AGCAGCAGCAACATCAGCAGGA---------------GCA---A------------CA------------AAAG-----------------------------------------CAA--------------------------C---------------AGCAACAAGA----------------GCAAGT----GCAA-------------------------------------------------------------------------C
droBip1 scf7180000396708:998418-998632 + AGCAG-CAGCAGC-CGCGTC------------------CGCAGCGAC----------------------------------------------------------------------------------------------------------------------------GCTATA---TG-------------------------------------------------------------------------------------------CGCAGCGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACCGCTGCC---------------AGCGTCACTCA------------------------GCTGCTCTCCGAAAGCTGCAACAGTCT-G---------------------------CTGCAGCGATTTCGAAGGAATCCGA---------------------------G----CG----AACGACCTGATAA--------TAA------------------------------------------ACAA--------------------------CAGCAAC---------------------AACAACAGCAACATCAACAGGA---------------GCA---A------------CA------------AAAG-----------------------------------------CAA--------------------------C---------------AACAACAAGA----------------GAAACA----GCAACATCAGGC--------------------------------------------------------------ACGC
droKik1 scf7180000302351:880927-881133 - GGCG--CAACAGC-AGCAGG------------------CGCAGCAGC------------AGCAGCAGGCCATCTCC--------------------------------------------------------GCCGTTGCTGCCGCCCA--------------AC------AG---CAACAGCA---------------------------------------------------------------------------------------------G---CATCAAGTCTCGGTCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCAGCA------------------------------------------------------------------------------------------------------------------------GCAGCA---------------------------------------ACATCAGGT-------GGCCGCCGCCG------C----------------TGC------------CCAGCAGCAACATCAACAGCA---------------GCA---A------CAG---CAACACCAGCA------------------------------GCA-----------GCAACAGCAACAA--------------------C---------------AGCAGCAAGT-----------------------------------GGCCG--------------CCG-----------------C-C-CAGC---------------------A
droFic1 scf7180000454048:284052-284302 + AGCAA-CAACAAC-AATGCC------------------AGTG-------------------G----------------------------------------------------------------------------------------------------------------------A---AT------------------------------------------AGCCTCCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGCAGCAGTTCTCACCGGAAGCGGCACCATCGTGCCCCTTGTGGCACGTGGCTCGCACTACAGTCACCACGGCAACACGCGCTACCAGCCGAGGACGCAGCAGCAACT------------------------------------------------------------------G---------------------------------------------------------------------------------------------------------------------------------------------TTGCACC------------------------A---------------GCAG-----------------------CAGCAGCAGC---------------------ACCAGCAGCAACATCAACAGCA---------------ACA---C------------CA------------GCATCAACAGCAGCAACATCAACCGCA-----GCAGCAACA------------CTACAGCTA------------------------------------------------------------------------------------------------------------------T-CACCATCCG------C---------A
droEle1 scf7180000491043:242235-242469 + AGCAA-CAGCAAC-AGG---------------------T----------------------G----------------------------------------------------------------------------------------------------------------------A---AT------------------------------------------AG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGTCCCAGTCTAATTTCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTATGTGC-CCAATT-----------------GCGATGGCCTGAGCAGCAGCAACTT--GAGCAATCCGAGC-------------------------C----AC----AACA-----------GCAGCA---------------------------------------ACATGAGTAG-----------------------CAACAACAACACCAGCAGCAA-C--------AACAACAGCAACACCACCAGCA---------------GCA---GCAACAACAA---CAACACCA-----------------------------------------------GCAGCCACAACAG--------------------CAACAC---------------CAGAAAC-----------------------------ACCAGCACA--------------ACG-----------------C-C-C--------------ACCGCCATTGA
droRho1 scf7180000777063:108129-108367 - GCA-G-CGTG----GGCGAC--------TCCCTGTGGAGCAGCAGCGAGG-------------------------------------------------------------------------------------------------------------------------------------------CCCAGCAGTTCCAGCAGCAGC------------------------------------AGCAGCAACAACAGGCCCAGCAACAGGCGCAG---CAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCA---------TCATCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CC------------------------ACCAGCAACAG--------------------------------CAGCAGGCGC---------------------TGCAGCAGCAGCAGCAACAGGCGCAGCAGCAACAACAGCAGCAA------CAG---CAACACCATCA------------------------------CCA-----------C---CAC------------------CA------------------------------------------------------TCAG----CAGCAGCAGAGCGGACAGGCGCAGGCGGCGCA--G------ACGC-A-----------------------TCAC
droBia1 scf7180000302428:7155201-7155417 - GCCCAACAGCAGC-AGCAGC------------------AGCAGCAGC------------AA------G-----------------------------------------------------------------------CTGTTGTCCA--------------GC------AG---CAACAGCA---------------------------------------------------------------------------------------------G---CAGGTTGTTGCCGCCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCAGCA------------------------------------------------------------------------------------------------------------------------GCAGCA---CCACCAGCAGCAGCAACAGCAGCAGCAGCAGCAACAAC--------------------------------AGCAGGCCG---------------------TGCAGCAGCAACACCA---------------------GCA---G------CAGCAGCAACACCAACA------------------------------GCA-----------G---CAA------------------CA------------------------------------------------------ACAG----CAACATGCCG--------------CCGCCGTC--GCAGCTGCCGC-T-TCGCAT-------------------C
droTak1 scf7180000415812:122959-123217 - AGCAG-CATCCGC-AGCAGC------------------AGCAGCAAC----------------------------------------------------------------------------------------------------------------------------AT---CACCAG---------------------------------------------C---TGCCT------------------------CGC------------------CAG------------------------------------------------------------------------------------------------------GAGTC-------CATGGAGA------------------------------------------------------------------------------------------TGGAGGAGCGACACAGCGGCC--------------------------------------------GCTCGCA----------------------TTAC------------------------------------GGCGGA--CTCT-----------------------------------------T-GGTGGCCTCGACGGTC-AAGCAGCCG--CAGGAGATCT---GTCACCATCATCA------------------------------------------CCAG-----------------------CACCA---------------------------GCAGCAGCAGCAGCAACAGCA---------------GCA---A------CAG---CAGCAACATAT------------------------------ACA-----------GCAGCAACAGCAA--------------------CAGCAG---------------CGAATGCAC--CACG--------------------------CA----------------------------------CA--T-CCGCATCCG------CCGAGCATTGC
droEug1 scf7180000409466:1486857-1487066 - AGCTA-CAACACC-AGCAGT------------------TGCAACATC------------AAC----------------------------------------------------------------------------------------------------AGCAGCAACAT---CAGCAA---------------------------------------------C---TACTG------------------------CAGCAACAGCT---------------------------------------------------------------------------------------------------------------------GCCGCAGCAGCGACGGCA------------------------------------------------------------------------------------------AACGTACAAGGAATACT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCAGCA---------ACAT-----------------------CAGCAGCAAA---------------------AGCAACAGCAACAGCTGCAGCAGCAGCA---------ACA---A------CAA---CAACAACA--------------------------------------------------ACAACAACAACAACAGCAA---C--------------------------------AAC-----------------------------CCCTGCG--------------------------G------ATAT-T-CCGCGTCCA------C---------T
dm3 chr3L:9464437-9464678 + AGCAA-CACCAGT-GGCAAC------------------ATCGATGCT------------AGG----------------------------------------------------------------------------------------------------------------------AG---C------------------------------------------AGCCACGC---------------------------------------------CGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACAGGC---------------AGTACCACGCACAAGGCCAGCCACGCCCA------------------------------------------CAATGCC------AG-----CAGGAGCAG--------TAGCTGGA---------------------------A----CGCC--TACGACCCCACAGCACCAGCA---------------------------------------AC--------------------------------AGCAGCACC---------------------TGCATCAGCAACATCAACAGCA---------------GCA---A------------CAACAGCAA---------------------CA---------AC-AA-------------CAGCAG---------------CAGCAACA-----GCATATGTTGCAGCATCCGC--------------------------------------AC--------------------------------ACGC-ACCCGCATCCG------CATGCC----C
droSim2 3r:15955549-15955777 + GCCGT--TGCAGC-C-CAGC------------------AGCAGCAAC----------------------------------------------------------------------------------------------------------------------------AT---CA---G------------------------------------------CATC---CACACCAGCAGCATCCCCAGCAGC------------------------------------------------------------------------------------------------------------AGCAGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGGCGCAGAACCAGGGGCATCCA------------------------------------------CATCACCTCA-----------------------------------------TGGGCGGTGGCAATGGACTGGGCAACGG--CAACGGATTG---GGCA--------T-----------------------------------------------------------------------------------------------------ACAACATCCCGGC---CA------------------GCA---G------------CAGCAGCAGCA------------------GCAACAACAGCA-----GCAGCAACA------------TCCCGGCCAG-----------------------------------------------------------------------------------------------------T------ACAA-C-TCGAATCTG------CTCAACCAT-G
droSec2 scaffold_2:6660542-6660760 - ACCAG-CAACAGC-AGCAGC------------------CCCAACAAC------------AAC----------------------------------------------------------------------------------------------------------------------AGCA---------------------------------------------------------------------------------------------G---CAGCAAGCTCCTGTTG-----------------------------------------------------------------------------TTCCGCCGGCAGAAGTCAAAGCTCCAGCGAAA------------------------------------------------------------------------------------------AGGGGACGAAAAAAGAAGGCAGCAACA--------------------------------------------A----------------------TTGC------------------------------------GGCAGA---------------------------------------------------------------------------------------------------------------------------------A---------------GCTG-----------------------C----------------GGCTGCAGCTGCAAAGCAGCAGCAACAACA---------------------ACA---A------CAG---CAGCAGCAACAACAAGCG-----------------------------------------CAA------------------C-----------------------AGCAGCAACA-----------------------------------GGTGG--------------CCG-----------------C-T-CAGCAGCAG------C---AT----C
droYak3 3L:5829370-5829610 - GCA-G-CAAAGGC-CAGCAA-----------------AGCCACAAGCAGAACAAGCAGCAGT----------------------------------------------------------------------------------------------------AGCAGCAACAG---CAACAG---------------------------------------------C---AGCAG------------------------CGGCAACAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGACAGC---------------------------G----GC----AACA-----------GCAACA---------------------------------------ACATAAACAGCAACAA-----------------CAGCAGCGGC---------------------AGCAACAGCAAGAGCAGCAGCAGCAGCAATAACTGCAACA---------------------GCA--------------------------------------GCAGCAACA------------CCACCAGCAACACCA------------------------------------------------------CCAG----CACCACCACG--------------ACGCTGTACAC------GTGCTC-CAGCGCCTC------CTCGTCGCTGA
droEre2 scaffold_4690:1070365-1070640 + AGCAG-CAACAGT-CGTCAA-----------------CGTCACAGGCCAATT----------------------CCACGGGCCAGACATCGTTCTCTGCCCACATGTTTGGCAATATGAATCAGTCGAGCTCGTCCTAGCTGCCAACCAAGCGCAATTCAAA---------C--------TC---ATAAT-TCTCCGCCGCCGCAGTAGCAGCAGCAACATTAGCTGC---CAG-CCAA---------------------CAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACT---------------------------CCAACAGCAGCA------------------------GCA---A------CAG---CAACTCCAAAT------------------------------CCA-----------GCAATACCAGCAG--------------------AATCCG---------------CAAATCCAT--TTGCA-A-----AACAGCAG----TAGCAACT------------------------------------------------A------TGCGGCCTCGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
AGCAG--AACAACTGGCAGC------------------GCCGTCAACCTAAT---------G----------------------------------------------------------------------------------------------------------------------AG---------------------------------------------------------------------------------------------CAGCGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCGCATACTGTGGCAACGCTGCCACTCGCAAA-------------------------CCT---------------AGCACAGGAG-GCAATCAGCGTAATCTCA-------------------------AGGAGCGCGA---------------------------A----CG----TTCGAC----------------------------------------------------------------------GACTGCCGCTTTAGCCAC----------------GGAT-CAGC--CAAAGCAGCAACAACTGCA---------------------GCA---A------AAG---CAACAACAACA------------------------------ACA-----------ACAACAACAGCAG--------------------CAGCAG---------------CAGACACGC--TTGGC--------------------------A--------------------------A------ACGC-C-TCGCATCTA------TTTGACCTTGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCGTAATCTCA-------------------------AGGAGCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002000000000020000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G----TTCGAC----------------------------------------------------------------------GACTGCCGCTTTAGCCAC----------------GG..............................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGC--------------------------A--------------------------A------ACGC-C-TCGCATCTA------TTTGACC....2811.001000000000000000000000000000000000010000000000000000000000000000
.................................................AAT---------G----------------------------------------------------------------------------------------------------------------------AG---------------------------------------------------------------------------------------------CAGCGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCGCATACTGTGGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001000000000000000000000010000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG---------------CAGACACGC--TTGGC--------------------------A--------------------------........................................1911.001000000000000000000000000000000000000010000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCAC----------------GGAT-CAGC--CAAAGCAGCAA..........................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000100000000000000000000000000
.........................................GTCAACCTAAT---------G----------------------------------------------------------------------------------------------------------------------AG---------------------------------------------------------------------------------------------CAGCGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
.GCAG--AACAACTGGCAGC------------------GCCGTCAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGCTTTAGCCAC----------------GGAT-CAGC--CAAA.................................................................................................................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAC----------------------------------------------------------------------GACTGCCGCTTTAGCCAC----------------GGAT-C..........................................................................................................................................................................................................................................................................................2811.001010000000000000000000000000000000000000000000000000000000000000
AGCAG--AACAACTGGCAGC------------------GC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000000000000000000000000000000000000000000000000000000000000
......................................GCCGTCAACCTAAT---------G----------------------------------------------------------------------------------------------------------------------AG---------------------------------------------------------------------------------------------CAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAC----------------GGAT-CAGC--CAAAGCAGCAA..........................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-GCAATCAGCGTAATCTCA-------------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGCTTTAGCCAC----------------GGAT-CAGC--CAAA.................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000001000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG--------------------CAGCAG---------------CAGACACGC--TTGGC--------------------------...................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA---------------------------A----CG----TTCGAC----------------------------------------------------------------------GACTGCCGCTTT......................................................................................................................................................................................................................................................................................................................2311.001000000000000000100000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCGCATACTGTGGCAACGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACAGGAG-GCAATCAGCGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGAG-GCAATCAGCGTAATCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000010000000000000000000000000000000000000000000000000
.........................................GTCAACCTAAT---------G----------------------------------------------------------------------------------------------------------------------AG---------------------------------------------------------------------------------------------CAGCGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
..........AACTGGCAGC------------------GCCGTCAACCTAAT---------G----------------------------------------------------------------------------------------------------------------------A....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGC--------------------------A--------------------------A------ACGC-C-TCGCATCT..................2011.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAC----------------------------------------------------------------------GACTGCCGCTTTAGCCAC----------------................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000001000000000000000000000000000000
.................................................AAT---------G----------------------------------------------------------------------------------------------------------------------AG---------------------------------------------------------------------------------------------CAGCGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCGCAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCAC----------------GGAT-CAGC--CAAA.................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000100000000000000000000000000
.........................................GTCAACCTAAT---------G----------------------------------------------------------------------------------------------------------------------AG---------------------------------------------------------------------------------------------CAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000001000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-GCAATCAGCGTAATCTCA-------------------------AGGAGCGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCAC----------------GGAT-CAGC--CAAAGC...............................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000001000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTTTAGCCAC----------------GGAT-CAGC--CAA..................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCA-------------------------AGGAGCGCGA---------------------------A----CG----TT............................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000010000000000000000000000000000000000000000000000000
....G--AACAACTGGCAGC------------------GCCGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTGCCGCTTTAGCCAC----------------GGAT-C..........................................................................................................................................................................................................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATCTCA-------------------------AGGAGCGCGA---------------------------A----CG----TT............................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAG--------------------CAGCAG---------------CAGACA.......................................................................................................1970.141001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGCAG--------------------CAGCAG---------------CA...........................................................................................................20200.102000000000000000000000000000000000000000000000000000000000002000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---------------------GCA---A------AAG---CAACAACAACA------------------------------ACA-----------...................................................................................................................................................................23150.071000000000000000000001000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------------------ACA-----------ACAACAACAGCAG--------------------CAGCAG---------------CA...........................................................................................................25200.051000000000000001000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA------------------------------ACA-----------ACAACAACAGCAG--------------------CAGCAG---------------CA...........................................................................................................29200.051001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA------------------------------ACA-----------ACAACAACAGCAG--------------------CAGCAG---------------C............................................................................................................27200.051000000000000000010000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----------ACAACAACAGCAG--------------------CAGCA.............................................................................................................................19200.051000000000000000000000000010000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-----------ACAACAACAGCAG--------------------CAGCAG---------------C............................................................................................................22200.051000000000000000000000000000000001000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------AAG---CAACAACAACA------------------------------ACA-----------ACAA...............................................................................................................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGCAG--------------------CAGCAG---------------C............................................................................................................19200.051000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACA------------------------------ACA-----------ACAACAACAGCAG--------------------C.................................................................................................................................24200.051000000000000000000000000000000000000000000000000000000000001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA------------------------------ACA-----------ACAACAACAGCAG--------------------CAGCAG---------------C............................................................................................................26200.051000000000000000010000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACAGCAG--------------------CAGCAG---------------C............................................................................................................20200.051000000000000000000000000000000100000000000000000000000000000000
droMoj3
AGCAG-CAACATC-TACGAC------------------AGCAGCAAC----------------------------------------------------------------------------------------------------------------------------GT---CGCCAG---------------------------------------------C---AACTG------------------------CAG------------------CAG------------------------------------------------------------------------------------CAGCAGTTGCTCCCGCAGTGGTG-CAGCTGCAGCTGAT-------------------------------------------------------------------------------------------------------------TAGCAACA--------------------------------------------A----------------------TGGCACCT---------------TGCCCAGGA--GCAGTCCGCGTAAGCT-----------------GCTCCTC--GAC-----TCTGGCTCA---------------------GCGACGT--TGACGCG--TCAGAG--------CAA-----------------------------------------------------------------------------------------------------GCAGCAGCAGCA------------------------GCA---A------CAG---CAACAGCAACA------------------------------GCA-----------GCAACAGCAGCAG--------------------C---------------AAAATCTGT-GCGCTTTGG-CTAAGGTCTCCA----GCAGCATTGAGT---------------------------------------------------------TGGCGT--TSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------CAG---CAACAGCAACA------------------------------GCA-----------GC.................................................................................................................................................................20200.051000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG---CAACAGCAACA------------------------------GCA-----------GCAACAGCAG.........................................................................................................................................................26200.051100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAACA------------------------------GCA-----------GCAACAGCAGC........................................................................................................................................................23200.051100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---CAACAGCAACA------------------------------GCA-----------GCAACAGCAG.........................................................................................................................................................25200.051100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA------------------------GCA---A------CAG---CAACAGCAACA------------------------------GCA-----------GC.................................................................................................................................................................26200.051100000
droGri2
AACAG-CAACAAC-AGCATC------------------AGCAAGAGC------------AGC----------------------------------------------------------------------------------------------------------------------A---------------------------------------------------------------------------------------A---------------------------------------------------------------------------------------------------------------------------------------AATGTAATAATTGCAAAGCAGTTTGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C----------GCAGGTGCGCCACCCGCCTTTTGTCGAGGACCTGAAC--CTGCAACTT--AACCGGCTGCCGCCTCAAAA--------------------------------------------GCGATG---------------------------------------AG--------------------------------CATGGCTGA---------------------TAAAGCAGCAACAGCAACA------------------GTA---A------CAG---CAATAACAACA------------------------------AC-AA-------------TAACAA---------------CAACAACA-----GT------------ATCCGAT--GC--TGG-----------------GCA------------------------------------------ACGT-C-TCGTATTTAATGCATTTGATCCTTGASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
AACAG--GCCAAC-TGGAAG------------------ACCGGCAAC----------------------------------------------------------------------------------------------------------------------------ATTATC---AA------------------------------------------CAGC---CACTG---------------------------------------------GAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACCACCACCGCCGCC---------------ACCGGCAAA-------------------------TCCTGCTCATGAGAATGTAC-GCAGTTG-G---------------------------CTAAGGAAAATT-GCAGAAATCCAA--------------------------------CG----TACAGCCGAAC-G--------TCA------------------------------------------GCAA-----------------------CAGCAACAAA---------------------AAGAGCAGCAGCAGCAGCA------------------GCA---G------------CAGCAACAACA------------------ACA---------AC-AG-------------CAGCAG---------------CAACAACA-----G---------------------------------------------------------------------------------------------------------------------------CSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC-AG-------------CAGCAG---------------CAACAACA-----.............................................................................................................................18200.35700070
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACA------------------ACA---------AC-AG-------------CAGCAG---------------C.........................................................................................................................................21200.20400040
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA------------------ACA---------AC-AG-------------CAGCAG---------------CAAC......................................................................................................................................21200.15300030
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACA------------------ACA---------AC-AG-------------CAGC...........................................................................................................................................................19200.10202000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAGCA------------------GCA---G------------CA........................................................................................................................................................................................................................22200.10200020
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------------CAGCAACAACA------------------ACA---------AC-AG-------------...............................................................................................................................................................19200.05101000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCA------------------GCA---G------------CAGCAAC...................................................................................................................................................................................................................21200.05100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACA------------------ACA---------AC-AG-------------CAGCAG---------------CAACAAC...................................................................................................................................28200.05100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA------------------ACA---------AC-AG-------------CAGCAG---------------CA........................................................................................................................................19200.05100001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------------CAGCAACAACA------------------ACA---------AC-AG-------------CAGCAG---------------CA........................................................................................................................................27200.05100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACA------------------ACA---------AC-AG-------------CAGC...........................................................................................................................................................21200.05101000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACA------------------ACA---------AC-AG-------------CAGCA..........................................................................................................................................................21200.05100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCA------------------GCA---G------------CAGCAACA..................................................................................................................................................................................................................22200.05100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------------------GCA---G------------CAGCAACAACA------------------ACA---------.................................................................................................................................................................................20200.05101000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA------------------ACA---------AC-AG-------------CAGCAG---------------CAACAA....................................................................................................................................24200.05100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACA------------------ACA---------AC-AG-------------CAG............................................................................................................................................................20200.05100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCA------------------GCA---G------------CAGCAACAACA------------------ACA---------AC-AG-------------...............................................................................................................................................................27200.05101000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACA------------------ACA---------AC-AG-------------CAGCAG---------------CAAC......................................................................................................................................27200.05100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGCAGCAGCAGCAGCA------------------GCA---.......................................................................................................................................................................................................................................21200.05100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACA------------------ACA---------AC-AG-------------CAGCAG---------------CAA.......................................................................................................................................24200.05100100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---G------------CAGCAACAACA------------------ACA---------AC-AG-------------CA.............................................................................................................................................................22200.05100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG-------------CAGCAG---------------CAACAACA-----G---------------------------------------------------------------------------------------------------------------------------C18200.05100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------------------ACA---------AC-AG-------------CAGCAG---------------CAACAACA-----G---------------------------------------------------------------------------------------------------------------------------.24200.05101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAACA------------------ACA---------AC-AG-------------CAG............................................................................................................................................................21200.05101000
dp5
GGCCG-CCGCCGC-CGTGGCCGCAGCAGCCG-------CCCAACAGC------------AGC----------------------------------------------------------------------------------------------------------------------AG---CAGGTCCACCAGCACCAGCAACAGC------------------------------------AGCAGCAAC------------------------------------------------------------------------------------------------------------AACAGC---------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGGTGCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CC------------------------ACCAGCAGCAGC--------------------------------AGCAGGCGG---------------------CGCACCAGCACCAGCAGCAACA---------------GCA---G------------CAGCAGCAA---------------------CA---------AC-AA-------------CAGCAG---------------CAGCAACA-----GC-----------------------------------------------------ATGCCG--------------CCGCCGTA--G------CCGC-C-TCGCATCCG------CATGCCCATGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......CGCCGC-CGTGGCCGCAGCAGCCG-------CCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGC--------------------------------AGCAGGCGG---------------------CGC...............................................................................................................................................................................................................................................................................2011.0010010000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CC------------------------ACCAGCAGCAGC--------------------------------AGCAGGC.........................................................................................................................................................................................................................................................................................................2350.2010000100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CC------------------------ACCAGCAGCAGC--------------------------------AGCAG...........................................................................................................................................................................................................................................................................................................20200.1020000000200
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA---------------GCA---G------------CAGCAGCAA---------------------CA---------.................................................................................................................................................................................20200.1020000200000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAA---------------------CA---------AC-AA-------------CAGCAG---------------CAGC......................................................................................................................................20200.1020200000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------CA---------AC-AA-------------CAGCAG---------------CAGCAAC...................................................................................................................................20200.1020010100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA---------------------CA---------AC-AA-------------CAGCAG---------------CAGCAACA-----.............................................................................................................................23200.1020100100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------AC-AA-------------CAGCAG---------------CAGCAACA-----GC-----------------------------------------------------......................................................................21200.1020200000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAA---------------------CA---------AC-AA-------------CAGCAG---------------CAGC......................................................................................................................................23200.0510010000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------GCA---G------------CAGCAGCAA---------------------CA---------AC-AA-------------CAGCAG---------------C.........................................................................................................................................27200.0510100000000
..............................................................................................................................................................................................................CAGC------------------------------------AGCAGCAAC------------------------------------------------------------------------------------------------------------AACAGC---------------------------------------------------------------------------------------------------------------------------------------------------------AGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000010000
.....................................................................................................................................................................................................CACCAGCAACAGC------------------------------------AGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACA---------------GCA---G------------CAGCAGCA..................................................................................................................................................................................................................19200.0510000100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CC------------------------ACCAGCAGCAGC--------------------------------AGCAG...........................................................................................................................................................................................................................................................................................................22200.0510000000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---------------------CA---------AC-AA-------------CAGCAG---------------CAGCA.....................................................................................................................................19200.0510100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------------CAGCAGCAA---------------------CA---------AC-AA-------------CAGC...........................................................................................................................................................20200.0510100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAA---------------------CA---------AC-AA-------------CAGCAG---------------..........................................................................................................................................21200.0510100000000
...........................................................................................................................................................................................................CAACAGC------------------------------------AGCAGCAAC------------------------------------------------------------------------------------------------------------AACAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000100000
..............................................................................................................................................................................................................CAGC------------------------------------AGCAGCAAC------------------------------------------------------------------------------------------------------------AACAGC---------------------------------------------------------------------------------------------------------------------------------------------------------AGCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510100000000
..............................................................................................................................................................................................................CAGC------------------------------------AGCAGCAAC------------------------------------------------------------------------------------------------------------AACAGC---------------------------------------------------------------------------------------------------------------------------------------------------------AGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510010000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA---------------------CA---------AC-AA-------------CAGCAG---------------CAG.......................................................................................................................................18200.0510100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CC------------------------ACCAGCAGCAGC--------------------------------AGCA............................................................................................................................................................................................................................................................................................................21200.0510000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---------AC-AA-------------CAGCAG---------------CAGCAACA-----G............................................................................................................................21200.0510100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---G------------CAGCAGCAA---------------------CA---------AC-AA-------------CA.............................................................................................................................................................20200.0510000001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAA---------------------CA---------AC-AA-------------CAGCA..........................................................................................................................................................19200.0510100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CC------------------------ACCAGCAGCAGC--------------------------------AGCAG...........................................................................................................................................................................................................................................................................................................19200.0510100000000
...........................................................................................................................................................................................................CAACAGC------------------------------------AGCAGCAAC------------------------------------------------------------------------------------------------------------AACAGC---------------------------------------------------------------------------------------------------------------------------------------------------------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000100000
droPer2
GGGAG--AGCAGC-AGCAGC------------------AGCAGCAGC------------AG----------------------------------------------------------------------------------------------------------------------------------------------------------------------C---GGCGG---------------------------------------------CGGCACA---------GCAGGAGACATTTGCGGCTGACGTTGATGATGAGCATAACTTTACAACTTCCGCTGAACCAACAGCAACAGC---------------------------------------------------------------------------------------------------------------------------------------------------------AGCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCA------------------------GCACCATCAGCAGTGAC--------------------------------AGT---------------------------------GGCAACAGCAACA------------------GCA---A------CAG---CAGCAGCAGGA------------------------------AC-AG-------------CAGCAA---------------CAGCAACA-----GC--------------------------------------------------G----------------------TTG-----------------C-A-C--------------ATTAAGCCGGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
AGCAG-CCTCAGC-CGCGTC------------------CGCAGCGAC----------------------------------------------------------------------------------------------------------------------------GTTATA---TG-------------------------------------------------------------------------------------------CGCAGCGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACCGCTGCC---------------AGCGTCACCCA------------------------GCTGCTCTCCGAAAGCTGCAACAGTCT-G---------------------------CTGCAGCGGTTTCGAAGGAATCCGA---------------------------G----CG----AACGACCTGATAA--------TAA------------------------------------------ACAG-----------------------CATCAGCAGC---------------------AGCAGCAGCAACATCAGCAGGA---------------GCA---A------------CA------------AAAG-----------------------------------------CAA--------------------------C---------------AGCAACAAGA----------------GCAAGT----GCAA-------------------------------------------------------------------------CSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCC---------------AGCGTCACCCA------------------------GCTGCTCTCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.GCAG-CCTCAGC-CGCGTC------------------CGCAGCGAC----------------------------------------------------------------------------------------------------------------------------GTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAAGGAATCCGA---------------------------G----CG----AACGACCT......................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCT-G---------------------------CTGCAGCGGTTTCGAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACATCAGCAGGA---------------GC...........................................................................................................................................................................................................................................2130.331000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCAGC---------------------AGCAGCAGCAACAT....................................................................................................................................................................................................................................................................2340.251010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGC---------------------AGCAGCAGCAACATCAGCA...............................................................................................................................................................................................................................................................2490.111100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---------------------AGCAGCAGCAACATCAGCAG..............................................................................................................................................................................................................................................................22160.061100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------------------------------ACAG-----------------------CATCAGCAGC---------------------AGC...............................................................................................................................................................................................................................................................................18180.061010000
droBip1
AGCAG-CAGCAGC-CGCGTC------------------CGCAGCGAC----------------------------------------------------------------------------------------------------------------------------GCTATA---TG-------------------------------------------------------------------------------------------CGCAGCGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACCGCTGCC---------------AGCGTCACTCA------------------------GCTGCTCTCCGAAAGCTGCAACAGTCT-G---------------------------CTGCAGCGATTTCGAAGGAATCCGA---------------------------G----CG----AACGACCTGATAA--------TAA------------------------------------------ACAA--------------------------CAGCAAC---------------------AACAACAGCAACATCAACAGGA---------------GCA---A------------CA------------AAAG-----------------------------------------CAA--------------------------C---------------AACAACAAGA----------------GAAACA----GCAACATCAGGC--------------------------------------------------------------ACGCSizeHit CountTotal NormTotal
No Reads
droKik1
GGCG--CAACAGC-AGCAGG------------------CGCAGCAGC------------AGCAGCAGGCCATCTCC--------------------------------------------------------GCCGTTGCTGCCGCCCA--------------AC------AG---CAACAGCA---------------------------------------------------------------------------------------------G---CATCAAGTCTCGGTCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCAGCA------------------------------------------------------------------------------------------------------------------------GCAGCA---------------------------------------ACATCAGGT-------GGCCGCCGCCG------C----------------TGC------------CCAGCAGCAACATCAACAGCA---------------GCA---A------CAG---CAACACCAGCA------------------------------GCA-----------GCAACAGCAACAA--------------------C---------------AGCAGCAAGT-----------------------------------GGCCG--------------CCG-----------------C-C-CAGC---------------------ASizeHit CountTotal NormTotal
No Reads
droFic1
AGCAA-CAACAAC-AATGCC------------------AGTG-------------------G----------------------------------------------------------------------------------------------------------------------A---AT------------------------------------------AGCCTCCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGCAGCAGTTCTCACCGGAAGCGGCACCATCGTGCCCCTTGTGGCACGTGGCTCGCACTACAGTCACCACGGCAACACGCGCTACCAGCCGAGGACGCAGCAGCAACT------------------------------------------------------------------G---------------------------------------------------------------------------------------------------------------------------------------------TTGCACC------------------------A---------------GCAG-----------------------CAGCAGCAGC---------------------ACCAGCAGCAACATCAACAGCA---------------ACA---C------------CA------------GCATCAACAGCAGCAACATCAACCGCA-----GCAGCAACA------------CTACAGCTA------------------------------------------------------------------------------------------------------------------T-CACCATCCG------C---------ASizeHit CountTotal NormTotal
No Reads
droEle1
AGCAA-CAGCAAC-AGG---------------------T----------------------G----------------------------------------------------------------------------------------------------------------------A---AT------------------------------------------AG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGTCCCAGTCTAATTTCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTATGTGC-CCAATT-----------------GCGATGGCCTGAGCAGCAGCAACTT--GAGCAATCCGAGC-------------------------C----AC----AACA-----------GCAGCA---------------------------------------ACATGAGTAG-----------------------CAACAACAACACCAGCAGCAA-C--------AACAACAGCAACACCACCAGCA---------------GCA---GCAACAACAA---CAACACCA-----------------------------------------------GCAGCCACAACAG--------------------CAACAC---------------CAGAAAC-----------------------------ACCAGCACA--------------ACG-----------------C-C-C--------------ACCGCCATTGASizeHit CountTotal NormTotal
No Reads
droRho1
GCA-G-CGTG----GGCGAC--------TCCCTGTGGAGCAGCAGCGAGG-------------------------------------------------------------------------------------------------------------------------------------------CCCAGCAGTTCCAGCAGCAGC------------------------------------AGCAGCAACAACAGGCCCAGCAACAGGCGCAG---CAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCA---------TCATCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CC------------------------ACCAGCAACAG--------------------------------CAGCAGGCGC---------------------TGCAGCAGCAGCAGCAACAGGCGCAGCAGCAACAACAGCAGCAA------CAG---CAACACCATCA------------------------------CCA-----------C---CAC------------------CA------------------------------------------------------TCAG----CAGCAGCAGAGCGGACAGGCGCAGGCGGCGCA--G------ACGC-A-----------------------TCACSizeHit CountTotal NormTotal
No Reads
droBia1
GCCCAACAGCAGC-AGCAGC------------------AGCAGCAGC------------AA------G-----------------------------------------------------------------------CTGTTGTCCA--------------GC------AG---CAACAGCA---------------------------------------------------------------------------------------------G---CAGGTTGTTGCCGCCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCAGCA------------------------------------------------------------------------------------------------------------------------GCAGCA---CCACCAGCAGCAGCAACAGCAGCAGCAGCAGCAACAAC--------------------------------AGCAGGCCG---------------------TGCAGCAGCAACACCA---------------------GCA---G------CAGCAGCAACACCAACA------------------------------GCA-----------G---CAA------------------CA------------------------------------------------------ACAG----CAACATGCCG--------------CCGCCGTC--GCAGCTGCCGC-T-TCGCAT-------------------CSizeHit CountTotal NormTotal
No Reads
droTak1
AGCAG-CATCCGC-AGCAGC------------------AGCAGCAAC----------------------------------------------------------------------------------------------------------------------------AT---CACCAG---------------------------------------------C---TGCCT------------------------CGC------------------CAG------------------------------------------------------------------------------------------------------GAGTC-------CATGGAGA------------------------------------------------------------------------------------------TGGAGGAGCGACACAGCGGCC--------------------------------------------GCTCGCA----------------------TTAC------------------------------------GGCGGA--CTCT-----------------------------------------T-GGTGGCCTCGACGGTC-AAGCAGCCG--CAGGAGATCT---GTCACCATCATCA------------------------------------------CCAG-----------------------CACCA---------------------------GCAGCAGCAGCAGCAACAGCA---------------GCA---A------CAG---CAGCAACATAT------------------------------ACA-----------GCAGCAACAGCAA--------------------CAGCAG---------------CGAATGCAC--CACG--------------------------CA----------------------------------CA--T-CCGCATCCG------CCGAGCATTGCSizeHit CountTotal NormTotal
No Reads
droEug1
AGCTA-CAACACC-AGCAGT------------------TGCAACATC------------AAC----------------------------------------------------------------------------------------------------AGCAGCAACAT---CAGCAA---------------------------------------------C---TACTG------------------------CAGCAACAGCT---------------------------------------------------------------------------------------------------------------------GCCGCAGCAGCGACGGCA------------------------------------------------------------------------------------------AACGTACAAGGAATACT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCAGCA---------ACAT-----------------------CAGCAGCAAA---------------------AGCAACAGCAACAGCTGCAGCAGCAGCA---------ACA---A------CAA---CAACAACA--------------------------------------------------ACAACAACAACAACAGCAA---C--------------------------------AAC-----------------------------CCCTGCG--------------------------G------ATAT-T-CCGCGTCCA------C---------TSizeHit CountTotal NormTotal
No Reads
dm3
AGCAA-CACCAGT-GGCAAC------------------ATCGATGCT------------AGG----------------------------------------------------------------------------------------------------------------------AG---C------------------------------------------AGCCACGC---------------------------------------------CGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACAGGC---------------AGTACCACGCACAAGGCCAGCCACGCCCA------------------------------------------CAATGCC------AG-----CAGGAGCAG--------TAGCTGGA---------------------------A----CGCC--TACGACCCCACAGCACCAGCA---------------------------------------AC--------------------------------AGCAGCACC---------------------TGCATCAGCAACATCAACAGCA---------------GCA---A------------CAACAGCAA---------------------CA---------AC-AA-------------CAGCAG---------------CAGCAACA-----GCATATGTTGCAGCATCCGC--------------------------------------AC--------------------------------ACGC-ACCCGCATCCG------CATGCC----CSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............................................T------------AGG----------------------------------------------------------------------------------------------------------------------AG---C------------------------------------------AGCCACGC---------------------------------------------CGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2318.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............T-GGCAAC------------------ATCGATGCT------------AGG----------------------------------------------------------------------------------------------------------------------AG---C------------------------------------------AGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2518.0080000000000000000000000000000000000000000000100000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000001000000210000000000000000000000000
...........................................TGCT------------AGG----------------------------------------------------------------------------------------------------------------------AG---C------------------------------------------AGCCACGC---------------------------------------------CGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2618.0080000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........AGT-GGCAAC------------------ATCGATGCT------------AGG----------------------------------------------------------------------------------------------------------------------AG---C------------------------------------------AGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2717.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................................TCGATGCT------------AGG----------------------------------------------------------------------------------------------------------------------AG---C------------------------------------------AGCCACGC---------------------------------------------CGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGC---------------AGTACCACGCACAAGGCCAGCCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACA-----GCATATGTTGCAGCATC............................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............GGCAAC------------------ATCGATGCT------------AGG----------------------------------------------------------------------------------------------------------------------AG---C------------------------------------------AGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTTGCAGCATCCGC--------------------------------------AC--------------------------------ACGC-ACC.........................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................TCGATGCT------------AGG----------------------------------------------------------------------------------------------------------------------AG---C------------------------------------------AGCCACGC---------------------------------------------CGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CC---------------------TGCATCAGCAACATCAACAGCA---------------GCA---A------------C.........................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........AGT-GGCAAC------------------ATCGATGCT------------AGG----------------------------------------------------------------------------------------------------------------------AG---................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...................C------------------ATCGATGCT------------AGG----------------------------------------------------------------------------------------------------------------------AG---C------------------------------------------AGCCACGC---------------------------------------------CGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCACAAGGCCAGCCACGCCCA------------------------------------------CA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACC---------------------TGCATCAGCAACA.....................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGCCCA------------------------------------------CAATGCC------AG-----CAGGAGCAG--------............................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................................CACGC---------------------------------------------CGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACAGGC---------------AGTACCACGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAACAGCA---------------GCA---A------------CAACAGCAA---------------------C...........................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
..........AGT-GGCAAC------------------ATCGATGCT------------AGG----------------------------------------------------------------------------------------------------------------------AG---C------------------------------------------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GT-GGCAAC------------------ATCGATGCT------------AGG----------------------------------------------------------------------------------------------------------------------AG---C------------------------------------------AGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC-AA-------------CAGCAG---------------CAGCAACA-----GCATATG......................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002
.......ACCAGT-GGCAAC------------------ATCGATGCT------------AGG----------------------------------------------------------------------------------------------------------------------AG---C------------------------------------------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------------------------AC--------------------------------AGCAGCACC---------------------TGCATCAGCAA.......................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-----CAGGAGCAG--------TAGCTGGA---------------------------A----CGCC--TAC...........................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACGCACAAGGCCAGCCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CC---------------------TGCATCAGCAACATCAACA...............................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................AGG----------------------------------------------------------------------------------------------------------------------AG---C------------------------------------------AGCCACGC---------------------------------------------CGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACAGGC---------------AG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGGC---------------AGTACCACGCACAAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AGCAA-CACCAGT-GGCAAC------------------ATCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCACGCCCA------------------------------------------CAATGCC------AG-----CAGGAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................T------------AGG----------------------------------------------------------------------------------------------------------------------AG---C------------------------------------------AGCCACGC---------------------------------------------CGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACAGGC---------------AG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCACAGCACCAGCA---------------------------------------AC--------------------------------AGCA............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................CACGC---------------------------------------------CGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACAGGC---------------AGTACCACGCACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................T------------AGG----------------------------------------------------------------------------------------------------------------------AG---C------------------------------------------AGCCACGC---------------------------------------------CGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACAGGC---------------AGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AAC------------------ATCGATGCT------------AGG----------------------------------------------------------------------------------------------------------------------AG---C------------------------------------------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
............T-GGCAAC------------------ATCGATGCT------------AGG----------------------------------------------------------------------------------------------------------------------AG---C------------------------------------------AGCCAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCAGCCACGCCCA------------------------------------------CAATGCC------A...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------------CAGCAG---------------CAGCAACA-----GCATATGTTGCA.................................................................................................................2711.0010000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG---------------CAGCAACA-----GCATATGTTGCAGCA..............................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................ATCGATGCT------------AGG----------------------------------------------------------------------------------------------------------------------AG---C------------------------------------------AGCCACGC---------------------------------------------CGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................GATGCT------------AGG----------------------------------------------------------------------------------------------------------------------AG---C------------------------------------------AGCCACGC---------------------------------------------CGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGAGCAG--------TAGCTGGA---------------------------A----CGCC--TACGAC........................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACC---------------------TGCATCAGCAACATCAACAGCA---------------GC...........................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG-----CAGGAGCAG--------TAGCTGGA---------------------------A----....................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGCCCA------------------------------------------CAATGCC------AG-----CAGGAGCAG--------TA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.............................................CT------------AGG----------------------------------------------------------------------------------------------------------------------AG---C------------------------------------------AGCCACGC---------------------------------------------CGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.......................................TCGATGCT------------AGG----------------------------------------------------------------------------------------------------------------------AG---C------------------------------------------AGCCACGC---------------------------------------------C...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCC------AG-----CAGGAGCAG--------TAGCTGGA---------------------------A----CGC.................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................C------------------ATCGATGCT------------AGG----------------------------------------------------------------------------------------------------------------------AG---C------------------------------------------AGCCACG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGCCCA------------------------------------------CAATGCC------AG-----CAGGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA-----GCATATGTTGCAGCATCCG..........................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........................................GATGCT------------AGG----------------------------------------------------------------------------------------------------------------------AG---C------------------------------------------AGCCACGC---------------------------------------------CGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCAACATCAACAGCA---------------GCA---A------------CAAC......................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................TGCT------------AGG----------------------------------------------------------------------------------------------------------------------AG---C------------------------------------------AGCCACGC---------------------------------------------CGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAA---------------------CA---------AC-AA-------------CAGCAG---------------CAGC......................................................................................................................................25130.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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droSim2
GCCGT--TGCAGC-C-CAGC------------------AGCAGCAAC----------------------------------------------------------------------------------------------------------------------------AT---CA---G------------------------------------------CATC---CACACCAGCAGCATCCCCAGCAGC------------------------------------------------------------------------------------------------------------AGCAGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGGCGCAGAACCAGGGGCATCCA------------------------------------------CATCACCTCA-----------------------------------------TGGGCGGTGGCAATGGACTGGGCAACGG--CAACGGATTG---GGCA--------T-----------------------------------------------------------------------------------------------------ACAACATCCCGGC---CA------------------GCA---G------------CAGCAGCAGCA------------------GCAACAACAGCA-----GCAGCAACA------------TCCCGGCCAG-----------------------------------------------------------------------------------------------------T------ACAA-C-TCGAATCTG------CTCAACCAT-GSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGCAACGG--CAACGGATTG---GGCA--------T-----------------------------------------------------------------------------------------------------A................................................................................................................................................................................................................................................................................2612.00200000000200000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA------------TCCCGGCCAG-----------------------------------------------------------------------------------------------------T------ACAA-C-T.........................2112.00200200000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGCGCAGAACCAGGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.00100000010000000000
.......................................GCAGCAAC----------------------------------------------------------------------------------------------------------------------------AT---CA---G------------------------------------------CATC---CAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000100000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCA-----GCAGCAACA------------TCCCG..................................................................................................................................................2011.00100001000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGATTG---GGCA--------T-----------------------------------------------------------------------------------------------------ACAACATCCCGGC---.................................................................................................................................................................................................................................................................2711.00100000000000010000
..............................................................................................................................................................................................................................................................................................................................................................................AGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGGCGCAGAACCAGGGGCAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCGCAGAACCAGGGGCATCCA------------------------------------------CAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----GCAGCAACA------------TCCCGGCCAG-----------------------------------------------------------------------------------------------------T------ACAA-C-..........................2611.00100000000010000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACTGGGCAACGG--CAACGGATTG---GG.................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000001000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCGCAGAACCAGGGGCATCCA------------------------------------------CA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000001000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTGGCAATGGACTGGGCATTT...................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000000000001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACA------------TCCCGGCCAG-----------------------------------------------------------------------------------------------------T------ACAA-C-TCGAAC....................2811.00100100000000000000
..........................................................................................................................................................................................................................................................GCAGC------------------------------------------------------------------------------------------------------------AGCAGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGGCGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2090.11100000000001000000
...................................................................................................................................................................................................................................................ATCCCCAGCAGC------------------------------------------------------------------------------------------------------------AGCAGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18100.10100010000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCA------------------GCAACAACAGCA-----GCA.........................................................................................................................................................................25200.10200000000000200000
..........AGC-C-CAGC------------------AGCAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15160.06100000000001000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCA------------------GCAACAACAGCA-----GCA.........................................................................................................................................................................22200.05100000000000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCA------------------GCAACAACAGCA-----GCAGC.......................................................................................................................................................................25200.05100100000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---G------------CAGCAGCAGCA------------------GCAACAACAGCA-----............................................................................................................................................................................25200.05100000000001000000
droSec2
ACCAG-CAACAGC-AGCAGC------------------CCCAACAAC------------AAC----------------------------------------------------------------------------------------------------------------------AGCA---------------------------------------------------------------------------------------------G---CAGCAAGCTCCTGTTG-----------------------------------------------------------------------------TTCCGCCGGCAGAAGTCAAAGCTCCAGCGAAA------------------------------------------------------------------------------------------AGGGGACGAAAAAAGAAGGCAGCAACA--------------------------------------------A----------------------TTGC------------------------------------GGCAGA---------------------------------------------------------------------------------------------------------------------------------A---------------GCTG-----------------------C----------------GGCTGCAGCTGCAAAGCAGCAGCAACAACA---------------------ACA---A------CAG---CAGCAGCAACAACAAGCG-----------------------------------------CAA------------------C-----------------------AGCAGCAACA-----------------------------------GGTGG--------------CCG-----------------C-T-CAGCAGCAG------C---AT----CSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........................................................................................................................................................................................................................................................................................GCAAGCTCCTGTTG-----------------------------------------------------------------------------TTCCGCCGGCAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000
..................................................................................................................................................................................................................................................................................................................................................................................................................GAAA------------------------------------------------------------------------------------------AGGGGACGAAAAAAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGGCAGCAACA--------------------------------------------A----------------------TTGC------------------------------------GG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
.................................................................................................................................................................................................................................................................................................................................................................................................GAAGTCAAAGCTCCAGCGAAA------------------------------------------------------------------------------------------AGGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAACAAGCG-----------------------------------------CAA------------------C-----------------------AGCAGC............................................................................................................2720.5010010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---A------CAG---CAGCAGCAACAAC.............................................................................................................................................................................................................19200.0510010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------ACA---A------CAG---CAGCAGCAACA...............................................................................................................................................................................................................19200.0510010
droYak3
GCA-G-CAAAGGC-CAGCAA-----------------AGCCACAAGCAGAACAAGCAGCAGT----------------------------------------------------------------------------------------------------AGCAGCAACAG---CAACAG---------------------------------------------C---AGCAG------------------------CGGCAACAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGACAGC---------------------------G----GC----AACA-----------GCAACA---------------------------------------ACATAAACAGCAACAA-----------------CAGCAGCGGC---------------------AGCAACAGCAAGAGCAGCAGCAGCAGCAATAACTGCAACA---------------------GCA--------------------------------------GCAGCAACA------------CCACCAGCAACACCA------------------------------------------------------CCAG----CACCACCACG--------------ACGCTGTACAC------GTGCTC-CAGCGCCTC------CTCGTCGCTGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAAGAGCAGCAGCAGC..........................................................................................................................................................................................................................................................2120.50100000010000
...................................................................................................................................................................................CAG---------------------------------------------C---AGCAG------------------------CGGCAACAACA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2230.33101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAA-----------------CAGCAGCGGC---------------------AGC...............................................................................................................................................................................................................................................................................1980.13101000000000
................................................................................................................................................................................CAACAG---------------------------------------------C---AGCAG------------------------CGGCAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1990.11100100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAA-----------------CAGCAGCGGC---------------------..................................................................................................................................................................................................................................................................................18100.10100001000000
.....................................................AGCAGCAGT----------------------------------------------------------------------------------------------------AGCAGCAACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19160.06101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA---------------------GCA--------------------------------------GCAGCAACA------------CC.....................................................................................................................................................19190.05101000000000
...................................................................................................................................................................GCAGCAACAG---CAACAG---------------------------------------------C---AGCAG------------------------C....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000000000
.....................................................AGCAGCAGT----------------------------------------------------------------------------------------------------AGCAGCAACAG---T........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100001000000
.......................................................................................................................................................................CAACAG---CAACAG---------------------------------------------C---AGCAG------------------------C....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05101000000000
droEre2
AGCAG-CAACAGT-CGTCAA-----------------CGTCACAGGCCAATT----------------------CCACGGGCCAGACATCGTTCTCTGCCCACATGTTTGGCAATATGAATCAGTCGAGCTCGTCCTAGCTGCCAACCAAGCGCAATTCAAA---------C--------TC---ATAAT-TCTCCGCCGCCGCAGTAGCAGCAGCAACATTAGCTGC---CAG-CCAA---------------------CAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACT---------------------------CCAACAGCAGCA------------------------GCA---A------CAG---CAACTCCAAAT------------------------------CCA-----------GCAATACCAGCAG--------------------AATCCG---------------CAAATCCAT--TTGCA-A-----AACAGCAG----TAGCAACT------------------------------------------------A------TGCGGCCTCGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................GACATCGTTCTCTGCCCACATGTTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0022000000
..................................................................................CAGACATCGTTCTCTGCCCACATGTTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
........................................................................................................................................................................................................................AACATTAGCTGC---CAG-CCAA---------------------C....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
.................CAA-----------------CGTCACAGGCCAATT----------------------CCACG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
.....................................................................................................................................................................................C---ATAAT-TCTCCGCCGCCGCAGTAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000
............................................................................................................................................................TTCAAA---------C--------TC---ATAAT-TCTCCGCCGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--TTGCA-A-----AACAGCAG----TAGCAACT------------------------------------------------A------TG.........2611.0011000000
.....................................................................................................................................................................................................................................................................AG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACT---------------------------CCAACAGCAGCA------------------------GCA---A------CAG---C.........................................................................................................................................................................................................................2720.5011000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACT---------------------------CCAACAGCAGCA------------------------GCA---A------CAG---CA........................................................................................................................................................................................................................2420.5010000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCA------------------------GCA---A------CAG---CAACTC....................................................................................................................................................................................................................1930.3310010000
.....................................................................................................................................................................................................................................................................AG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACT---------------------------CCAACAGCAGC......................................................................................................................................................................................................................................................................1860.1711000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---------------------------CCAACAGCAGCA------------------------GCA---A------C...............................................................................................................................................................................................................................18100.1010100000

Generated: 05/16/2015 at 10:11 PM