ID:

dvi_8251

 Coordinate:

scaffold_12928:393708-393858 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.3

Flybase annnotation

exon [dvir_GLEANR_17228:2]; CDS [Dvir\GJ16720-cds]; intron [Dvir\GJ16720-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TGGCGCTGTTTTGCCCGAAAGCGTGCCAGTTGTTGTTGTTGCTGACGGTTACGTGGATTACGTGAAAAGTGTTGCAGACAACAAAGTAGTAGCCGCAGCAGAGGCAACAGCATCGCACTGGGCCACGCTAGCGAGCAAAGCAGCGAGTAGCAGCTCAGGCCAAAGTTTGCTCGACGAGTGCCGTGCGGAACCTTTACACAGGTTTGAGTCCACAGCGTTCGTGTTCGACGTGACGAGCAGCGCACAGAAAG
************************************************************.((.....((..(((.............((.(((........))).)).)))..)).....))******************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M028
head
 V116
male body		 SRR060666
160_males_carcasses_total
 M027
male body		 SRR060668
160x9_males_carcasses_total
 SRR060686
Argx9_0-2h_embryos_total
 M047
female body
 SRR060682
9x140_0-2h_embryos_total
.........................................................................................................AACAGCATCGCACTGGGC................................................................................................................................ 18 0 1 2.00 2 2 0 0 0 0 0 0 0
............................................................................................................................................................................................AGCTTTTACACCGGTTTGAGTC......................................... 22 3 1 1.00 1 0 0 0 0 1 0 0 0
............................................................CGTGAAAAGTGTTGCAGAC............................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................CTTTTACACCGGTTTGAGTCG........................................ 21 3 1 1.00 1 0 0 1 0 0 0 0 0
................................................................................................................................................................................................TTTACACCGGTTTGAGTC......................................... 18 1 1 1.00 1 0 0 0 1 0 0 0 0
.............................................................................................................................................................................................GCTTTTACACCGGTTTGAGTC......................................... 21 3 1 1.00 1 0 1 0 0 0 0 0 0
......................GTGCCAGTTGTTGTTGTTGCTGACGGT.......................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 1 0 0
...............................................................................................................................................................................................TTTTACACCGGTTTGAGTCG........................................ 20 3 5 0.40 2 0 2 0 0 0 0 0 0
..............................................................TGAAAAGGCTTCCAGACAACAA....................................................................................................................................................................... 22 3 8 0.25 2 0 0 2 0 0 0 0 0
..............................................................................................................................................................................CGAGTCCCGTACGGAACG........................................................... 18 3 18 0.22 4 2 0 0 2 0 0 0 0
.............................................................................................................................................................................................GCTTTTACACCGGTTTGAGT.......................................... 20 3 8 0.13 1 0 0 1 0 0 0 0 0
TGACCCTGTTTTGCCCGAT........................................................................................................................................................................................................................................ 19 3 20 0.05 1 0 0 0 0 0 0 1 0
...................................................CGTGAATTACGTGATAAGG..................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 1

Anti-sense strand reads

ACCGCGACAAAACGGGCTTTCGCACGGTCAACAACAACAACGACTGCCAATGCACCTAATGCACTTTTCACAACGTCTGTTGTTTCATCATCGGCGTCGTCTCCGTTGTCGTAGCGTGACCCGGTGCGATCGCTCGTTTCGTCGCTCATCGTCGAGTCCGGTTTCAAACGAGCTGCTCACGGCACGCCTTGGAAATGTGTCCAAACTCAGGTGTCGCAAGCACAAGCTGCACTGCTCGTCGCGTGTCTTTC
********************************************************************************************************************************.((.....((..(((.............((.(((........))).)).)))..)).....))************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M027
male body		 SRR1106729
mixed whole adult body
 SRR060659
Argentina_testes_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060678
9x140_testes_total
 M047
female body
 SRR060667
160_females_carcasses_total
 SRR060679
140x9_testes_total
 SRR060687
9_0-2h_embryos_total
.............................................................................................................................GTGGTCGCTCGTTTCGTCGCTAAT...................................................................................................... 24 3 1 1.00 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................CGAGCTGCTCACGGCA................................................................... 16 0 2 0.50 1 0 1 0 0 0 0 0 0 0
................................................................................................................................GTCGCTCGTTTCGTCGCTAAT...................................................................................................... 21 2 2 0.50 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................TGTGACTAAACTCAGGTGT..................................... 19 2 3 0.33 1 0 0 1 0 0 0 0 0 0
.............................................................................................................................GGGGTCGCTCGTTTCGTCGCTAA....................................................................................................... 23 3 3 0.33 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................TCATCGTCAAGTCTGGTT........................................................................................ 18 2 4 0.25 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................CAAAGTCAAGTGTCGCAAG............................... 19 2 4 0.25 1 0 0 0 1 0 0 0 0 0
.............................................................................................................................GTGGTCGCTCGTTTCGTCGCTA........................................................................................................ 22 3 5 0.20 1 1 0 0 0 0 0 0 0 0
................................................................................TGTTTCCTAATCGGAGTCGTC...................................................................................................................................................... 21 3 6 0.17 1 0 0 0 0 1 0 0 0 0
..........................................................................................................................................................................................................AAAGTCAAGTGGCGCAAGC.............................. 19 3 20 0.15 3 0 0 0 0 0 0 1 1 1
............CGGGCATTCTCTCGGTCAA............................................................................................................................................................................................................................ 19 3 16 0.06 1 0 0 0 0 0 1 0 0 0
.....................................................................................................................................................................................................................TCGCAAGCAAAGGCTGTAC................... 19 3 17 0.06 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................TCCGGTCTCAAAGGAG............................................................................... 16 2 20 0.05 1 0 1 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12928:393658-393908 + dvi_8251 TGGCGCTGT------TTTG-CCCGA----AAGCGTG------------CCAGTTGTTGTTGTTGCTGACGGTTACGTGGATTACGTGAAAAGT------GTTGCA------------------------------GACAACAAA-------------------------------------------------------------------------------------------------------------------GTAGTAGCCG---------------------------------------------------------------CA---------------------GCA----------------------------------------------------------------------------------------------------GAGGCAACAGCATCGC--ACTGGGC---------------------CACGCTAGCGAGCA-----A------------AGCAGC------------------------------------------------------------------------------------------------------------------------------------------------------------GA--GTAGCAGCT---------------CAG-------------------------------------GCCAAAGTTTGCTCGACGAGTGCCGT---------GC----------GGAACCTTTAC---------ACAGGTTTGAGTCCACAGCGTT----------CGTGTTCGACG------TGA-------CGAGC-----AG--------C-GCACAGAAA-------------------G
droMoj3 scaffold_6500:4150474-4150716 + CTGCAATGC------AGTT---GCA----AAGCGCG------------CCAGCAACA---ATTGCCGA--------------------------------------------------------TGT------GC----------------------------------------AGCAGTTGGTGCTTGACGAG--------------C---AGCAGCAACAAGCC--------------------------------GCAGCAGCAG---------------------------------------------------------------------------------------CAGCA-------------------------------------------------------------------------------------------------GTAACAACATCATCACAGACTCAAC---------------------CACAATT---------------------------------------------------------ACCGC------------------CAACAAATATCGCGAGTGT--------CAGTGCCAACAGCAATGT----GAATTTAACAAATGCAACTGCAACAGC-A------------G---------------------------------------------------------------------------------------------------------------------------------TG---GATGCAAC---------GACAACAT-----------------------------CGCTTG------CAT-------TGAGC-----GA--------C-GA-ACAGCA------------------AC
droGri2 scaffold_14853:220304-220544 + CGC-ACAGC------GTTC-GCCGC----AAGAGGG------------CGATTTGCCGCCGGTGCACACGTTGACGCA----------------------------------------------------------------------------------------------------------------------------TGCGTTGCAGGTACAG-----------CA------GG-------AGGC------------GCAACAG---------------------------------------------------------------------------------CAACAGCAGCA-------------------------------------------------------------------------------------------------G---CAG--------------------------CAGCAACATCTGCAACATCAGT-------------CGGCAACAACAACAACGT-----------------------------------------------TAACA-------------TTGCTGACC--ACGCCCACAGCATACTCGCCCACAGTGAGCAGTTCGCGTG----------------------------------------------------------------------------------------------------------------------------------------------------------CAACTCCAGC---------A-------------------TT----------GGAATTGGACA------TGG-------C----AATGG--TCAT----G-GC-ACAACA-------------------G
droWil2 scf2_1100000004515:854244-854509 + CCTTCCC---------TTG-CCACA----AAGTGAG------------CCAGTTGTT---GTTGCTGACGGTTACGTGGATAACGTGAAAATTTGCAATAAAGCA------------------------------GACAACAAA---GCATTAGATCAGAAATTGAAATTTGAGCAACGATTAAAGCATAACGAATGCAATACCGATGAC---AGTAGCAACAT--------------------------------------ACAACAA---------------------------------------------------------------------------------CAACAAGAACG-------------------------------------------------------------------------------------------------A---CAA--------------------------CAAC-----------------------------AAC---------AGCAGCAACAAC--------------------------------------------------------------------------------------------------------------------AAGTAGCTTCTTCAA--ATGAATGTAACGAGTACGT--G--------------------------ACAAA--------------------------------------------------------------------------------------------------------------------------------------ATTCGATCTTCA-----------------ATTGA------------GT-AAAAAA-------------------C
dp5 XL_group1e:619730-619934 + TGTTCCCCG------CCCA-CCACA----AAGTGTC------------CCCGTTGTT---GTTGCTTGTGGTTACGTGGATTACGTGAAAACC------GTCGCA------------------------------AACAACAAGGCCGCCCCAGGGCAGCCATCGGAG--------CCCCCC-----------------------------------------------------------------------------GCAGCAGAGG------------------------------------------------------------------------------------TAGCTGT-------------------------------------------------------------------------------------------------------------A---------------------------------CGGAC---------------TGGC---------AGCAGGAGCA---------------------------------------------------------------------------------------------------------------------------------------A---------ACGCCGAGA--GGAGGAGACCGAAGCATCGCTGGG----------------------------------------------------------------------------------------------------------------------------------------------ATTGGATCTGGG-----------------ATCAG--C--------------CAC--------------------A
droPer2 scaffold_82:108100-108316 - AAGTGCGAA------AGCC-GCCCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAATACAATCAAGCGCAGCAGCATCAGGTGCGTC--GC----------AAGTACTCGTCGGAGTACAAT----------------------------------------------------CA--------------------------------------------------------------------------------------------------------------------TCATCACCAAGGAGCAGGAGTCAGC---------AGCAGCAGCGAG--------------------------------------------------------------------------------------------------------------------A-------------------------------------CGGGGATACAG----ACCACAAAG----------------------ACTAA-----------GT-CC---------TGGACAAACTCCGC--GCAGCACAAGA-------------------------------------AGTCCACGCAGTC----------CGTTT------CGGTGACGG-------C----A--------TCGCCCA-ACAATGTGA-------------------A
droAna3 scaffold_13117:3550173-3550327 - ACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC-----------AACA----------------------------GAAGCAAAAA---------------------------------------------------------------------------------------CAACA-------------------------------------------------------------------------------------------------GAAACAACAACATCGA--GTTCATC---------------------AATTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCCACAACAACAAGTGTTTAAG------CCAAA------------AGAGTTCGGCATGAAAT-------------------GGAA---------GCAGCTATA--------CGCTC----------CACTT------CAGTGCAGGTCGGTGCTCCGC-----CG--------C-CCACAAACA-------------------A
droBip1 scf7180000395973:373823-373989 + TGCCGGCAT------CACC---GCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC-----------AACAGCAGCAGC-------AACAACA---------------------------CCACCAGCAGTGGGGCA--GC----------CAGCACATGGCTGCCATGCAG----------------------------------------------------CA--------------------------------------------------------------------------------------------------------------------GCAACAGCAGGCGGCC-----CAAC---------AGCAGCAG-----------------------------------------------------------------------------------------------------------------CAGCAA------------------------------------------------------------------------------------------------------------------------------------------GCCCA-GCAGCA---GGCCCAGC---------AACAACAA-----------------------------CAGCAG------CAA-------CAAGC-----GG--------C-GCCGCAACA-------------------G
droKik1 scf7180000302621:98865-99093 + AGCGGCTGC------AGTG-GCTGC----CGGTGCG----------------------------------GTAAT-------------------------------------------------------A---------------------------------------------------------------------CAGCGGCCGCAATTGCAG-----------------CAGC-------TACCCCC------GCAGCAGCAG---------------------------------------------------------------CA---------------------GCA----------------------------------------------------------------------------------------------------GCAGCAACAACATCCT-----------------------------------C-------------------------------------C-TCCCGAGCCATTTGGCAATGCTGGTGGCC--------------------------------------------------------------------------------------------------------------------------AG------------CAGCCCT--------ACAA-------------GAAGCAGCGGCTAAGCGAGG-CCAATGCCAGCTCTATGAATCACCT---------GCCACCGCC---ACATCCTCAGC---------AGCAGCAG-----------------------------------------CAG-------CAGCA-----AC--------A-GCAGCAGCA-------------------G
droFic1 scf7180000453927:1368193-1368435 + TGGTGAAGTCGCACTACGTGCCACCGGCGAAGCACG------------CCAGCG----------------AGCAT------------------------------GCA------ACCG-------------------------------------------------------------------------------------------------CAA--------------------CAGGAGCC-------------CCAGCAACAG---------------------------------------------------------------------------------CAACAGCAACAGCAGCAG----------------------------------------------------------------------------------------------CAG--------------------------CAGCAGCAACAGCAACATCAACCGAAG-----CAAC---------AGCAACAG-----------------------------------------------CAACAGTGATAGCAACTGCAGCTGACACTGTGGCAACAGCAACCTTGACGGCGACAACAGGTGCAGCTG----------------------------------------------------------------------------------------------------------------------------------------------------------CAACTGCAGC---------AGCGGAGG-----------------------------------------TGA-------CAACA-----AG--------C-ATTAAAACA-------------------A
droEle1 scf7180000491044:945898-946112 - CGGAGCAGC------TGG------------------------------TCAACGATTATTGGCGTCGAGGT-------------------------------------------TTCGA---AACGGGGAA---------------------------------------------------------------------------TACA------AA-----------------TA---ATAATC-------------CCAGCAGCAG---------------------------------------------------------------------------------CAGCAGCAGCAACAGCAG----------------------------------------------------------------------------------------------CAACATCATCAC------A---------------------GCAATGCCAGGGAGCA-----A---------------------------------------------------------------------------------------------------------------------------------------------------------AACGC---------C--------AA------------CAATTTA--------TCAAA--------------------------------------ATCTTAGGGCCGAGCAGCAG---------GCACA-ATTGCT---GCCGCCGC---------CGCCGCCA-----------------------------CCACCG------CCA-------CCACT-----CC--------C-GCAGCAACA-------------------A
droRho1 scf7180000779911:490959-491214 - TGGCTTCGC------CCAC-----G-----AGC----ATCGTGA----ACAACAAC-------------AATGGCGTG----------------------------------------------------------------------------------------------------------TGCGTTGTCAA--------------C---TGCAG--------------------CTACACCC-------------CCAGCAGCAA---------------------------------------------------------------CA------------------GCAGCAGCAACATCAG----------------------------------------------------------------------------------------------CAA-----------------------CAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACAACAAC-AACACCAGCAACAA---------TAGCAGCGT--GGTGGAAATCAATAATTG-----------------TGTGC-CAGCA------------------GCCAAAGTGTTCAGTGCAAGTGTTCAGAATAAGCT-------------------AAAT---------AATAATATT--------AGCCCCACAGGCGGGGATATGCAACA------TGT-------TGCTG-----CT--------G-CCACGAGCA-------------------G
droBia1 scf7180000302428:281390-281516 + TGGCGCTGC------CTGG-CCTG------------------------CCACCC---------------------------------------------------GCT------GTCGAGATGGTGG-----------------------------------------------------------------------------AGTTGCAACTGC-----------AACA----------------------------GCAGCAGCAG---------------------------------------------------------------------------------CAGCAGCAACAACAGCAG----------------------------------------------------------------------------------------------CAA-----------C------------AT---------CTGCAGCA---------------CAGC---------AGCAGCAGCAAC--------------------------------------------------------------------------------------------------------------------AGC-------CCCA---------------------------------------------------------------------------------------------AGC--------------------------------------TG------------------------------------------------------------------------------------------------------------G-------------------C
droTak1 scf7180000413017:295940-296154 + TGGGACTGC------CGCC-C---A--------------------------TGGATTA--CCCGTCGG-----------------------CCTACAGAAGT---TCCGTCGGTCCCAGGATGCC----------GG-------------------------------------------------------------------CATCGCCGCAGC-----------AACAGCAGCAGC-------AACACCA------CCAAC------------------------AGTGGGGCGCTGCCCATGGAGCACAGCATCTGGCGGCCCTGCAGCA---------------------GCA----------------------------------------------------------------------------------------------------GCAG--------------GCCCAACAGGTGCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGCAACAGC-A---------------------------------------------------------------------------------------------------------------------------------------------------GGCGCAGC---------AGCAAGTG-----------------------------------------CAG-------CAGGC-----AC--------C-GCCGCAGCA-------------------G
droEug1 scf7180000409064:13777-14029 - TAGCGCCGG------TTCC---ACGG-----G----------------CAAACCGTCACTAACGGACAACTT---------------------------------TTT------GATGCAGCAACATTTAATGCAG----------------------------------------CCAGCCGG-----------------------------------------------------------ACC-------------CCAACAGCA---------------------------------------------------------------------------------------GCAGCA-------------------------------------------------------------------------------------------------G---CAG--------------------------CAGCAACCCTTTGGGCATCAG--------------CAGCAACAACAACAGCAGCAGC-ACATGGACTACGTGACAGAGCTGCTGACCAA---------------GGGTGCGGAGGGTGT--------AG---------GCGGTAT-------------------G---------------------AATGG---------C--------AA------------CCACTTG--------TTGAA--------------------------------------------------------------------------------------------------------------------------------------CTTCAATCTGGACATGG-------C----A--------GCGGCGTACCAGCAAAA-------------------G
dm3 chr2R:6877796-6878013 - TCACGCCGC------CCTC-TTCGC----CAGAGTCCAACCTG-----C--------------------------------------------------------GCA------GCCACAATTACGC------CC----------------------------------------AGCAGCTGGAGGCCA--------------------------------------------------------------------------------------------------------------------------ACGATTTGGCGGCACTGATACAGCAGCAGCAGCAACAGCAACAGCAACA-------------------------------------------------------------------------------------------------G---CAG--------------------------CAGC-----------------------------AGC---------AGCAGCAGCAGC---------------------------------------------------------------------------------------------------------------------------------------------------------------AGCT---------------CAA-------------------------------------TCCACAGCC-------------------------------------CGGCAACTCCACACCCGCTACAGCAATCC-------------------------------------------------------------TG---CGCTTCACC---AGCCAGAGCAATCCCACAATGACG
droSim2 3l:7655496-7655727 - TGTCGCAGT------ATTT-CCAGCAGCT-------CAACTCG-----CAAGTT---------------------------------------------------GCT------GCTGCAGCGGCGGGCAA---------------------------------------------------------------------TAGCGGTG------GC-----------AACAGCAGCAGC-------AACAACA------ACAACAACAA---------------------------------------------------------------CA---------------------GCA----------------------------------------------------------------------------------------------------GCGG--------------CAACAACAGCAGCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGCAACAGC-GACAGCGGCAATGA---------TGGCAGCAT--G--------------------------ACAGG--------------------------------------ATCCT-----CGGGAACCAT---------GG----------ACAACCATCGC---------AGCAGTGT-----------------------------------------TAG-------CAGCA-----AT--------G-ATTCGGGCAAGAGTAGCGCCACAG-GAGG
droSec2 scaffold_10:1683197-1683406 + TAACGCTGC------CAGT-CAGGA----CAGCACG------------CCTGC----------------------------------------------------TCA------ACGG--------------------------------------CAACTGTTGCGG--------CCGATTGC----A------------GGCGAC------AGCAGGAACAGGGG--------------------------------C------------------------------------------------------------------------------------------------CAGCA-------------------------------------------------------------------------------------------------GGGGCACCAACACT-------------------------------------------------------------------GCCGGCAGCAACACGGTCAACATG-CAGACC--CAGACCGACGATGAGTTGCTGCCG-------------CTGTTAGCC--ATGCTCCCACAAGACGCTCCCACA------------------ACAAC-A---------------------------------------------------------------------------------------------------------------------------------------------------GGAG--------------------------------------------------------------C-------------------AGC-------A-GCAGGAGCA-------------------G
droYak3 3L:8421605-8421842 - TGTCGCAGT------ATTT-CCAGCAGCT-------CAACTCG-----CAAGTT---------------------------------------------------GCT------GCCGCAGCGGCGGGCAA---------------------------------------------------------------------TGGCGGTG------GC-----------AACAGCAGCAGC-------AACAATAGCAACAATAACAACAA---------------------------------------------------------------CA---------------------GCA----------------------------------------------------------------------------------------------------GCGG--------------CAACAACAGCAGCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGCAACAGC-GACAGCGGCAACGA---------TGGCAGCAT--G--------------------------ACAGG--------------------------------------ATCCT-----CAAGCACCAT---------GG----------ACAACCATCGC---------AGCAGTGT-----------------------------------------CAG-------CAGCA-----AT--------G-ATTCGGGCAAGAGTAGCGCCACAG-GAGG
droEre2 scaffold_4690:4615668-4615895 + TAACTCCGA------CACG-CCCC-------T-------CGTGCCACGCCCACC------GTTCCTG--AGTCGC------------------------------GCC------GCTG-------------------------------------------------------------------------------------------------CAA--------------------CGGCCGCC-------------GCCGCAGCAG---------------------------------------------------------------------------------CAGCAGCAGCGGCGGCAGCGGCGCTCAGCATCAGCAACAACAGCAACAATTCGGCGGGATCAGCGGGCCAGCTGCCGCACAGCACGAGCAGCAGCAGCAACAACAACAACAACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAAC-A------------A----------------------------------------TGGG---TCTAACTCCGT-----------------------------------------------------------------------------TAA--------------------------------------------------------------C-------------------AGC-------A-ACGCCAACA-------------------A

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TGGCGCTGT------TTTG-CCCGA----AAGCGTG------------CCAGTTGTTGTTGTTGCTGACGGTTACGTGGATTACGTGAAAAGT------GTTGCA------------------------------GACAACAAA-------------------------------------------------------------------------------------------------------------------GTAGTAGCCG---------------------------------------------------------------CA---------------------GCA----------------------------------------------------------------------------------------------------GAGGCAACAGCATCGC--ACTGGGC---------------------CACGCTAGCGAGCA-----A------------AGCAGC------------------------------------------------------------------------------------------------------------------------------------------------------------GA--GTAGCAGCT---------------CAG-------------------------------------GCCAAAGTTTGCTCGACGAGTGCCGT---------GC----------GGAACCTTTAC---------ACAGGTTTGAGTCCACAGCGTT----------CGTGTTCGACG------TGA-------CGAGC-----AG--------C-GCACAGAAA-------------------GSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCATCGC--ACTGGGC---------------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002020000000000000000000000000000000000000000000000000000000000000
...................................................................................CGTGAAAAGT------GTTGCA------------------------------GAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000000000000000000000000000000000000000000000000000000000000
.................................GTG------------CCAGTTGTTGTTGTTGCTGACGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000100000000000000000000000000
droMoj3
CTGCAATGC------AGTT---GCA----AAGCGCG------------CCAGCAACA---ATTGCCGA--------------------------------------------------------TGT------GC----------------------------------------AGCAGTTGGTGCTTGACGAG--------------C---AGCAGCAACAAGCC--------------------------------GCAGCAGCAG---------------------------------------------------------------------------------------CAGCA-------------------------------------------------------------------------------------------------GTAACAACATCATCACAGACTCAAC---------------------CACAATT---------------------------------------------------------ACCGC------------------CAACAAATATCGCGAGTGT--------CAGTGCCAACAGCAATGT----GAATTTAACAAATGCAACTGCAACAGC-A------------G---------------------------------------------------------------------------------------------------------------------------------TG---GATGCAAC---------GACAACAT-----------------------------CGCTTG------CAT-------TGAGC-----GA--------C-GA-ACAGCA------------------ACSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................A----AAGCGCG------------CCAGCAACA---ATTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002000011
...CAATGC------AGTT---GCA----AAGCGCG------------C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.................................................................................................................................................................................CAGTTGGTGCTTGACGAG--------------C---A.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGCAACTGCAACAGC-A------------G---------------------------------------------------------------------------------------------------------------------------------TG---GATGCA.........................................................................................................................2711.001000010
...............................................................................................................................................................................................CGAG--------------C---AGCAGCAACAAGCC--------------------------------GCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
..............................................................TGCCGA--------------------------------------------------------TGT------GC----------------------------------------AGCAGTTGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.....................................................AACA---ATTGCCGA--------------------------------------------------------TGT------GC----------------------------------------AGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCGCGAGTGT--------CAGTGCCAACA..........................................................................................................................................................................................................................................................................................................................2411.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGACTCAAC---------------------CACAATT---------------------------------------------------------ACC....................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTGT--------CAGTGCCAACAGCAAT.....................................................................................................................................................................................................................................................................................................................2211.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGC------------------CAACAAATATCGCGAG................................................................................................................................................................................................................................................................................................................................................1911.001100000
droGri2
CGC-ACAGC------GTTC-GCCGC----AAGAGGG------------CGATTTGCCGCCGGTGCACACGTTGACGCA----------------------------------------------------------------------------------------------------------------------------TGCGTTGCAGGTACAG-----------CA------GG-------AGGC------------GCAACAG---------------------------------------------------------------------------------CAACAGCAGCA-------------------------------------------------------------------------------------------------G---CAG--------------------------CAGCAACATCTGCAACATCAGT-------------CGGCAACAACAACAACGT-----------------------------------------------TAACA-------------TTGCTGACC--ACGCCCACAGCATACTCGCCCACAGTGAGCAGTTCGCGTG----------------------------------------------------------------------------------------------------------------------------------------------------------CAACTCCAGC---------A-------------------TT----------GGAATTGGACA------TGG-------C----AATGG--TCAT----G-GC-ACAACA-------------------GSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...................................................................................................................................................................................................................................................................................................................................................................GCAGCA-------------------------------------------------------------------------------------------------G---CAG--------------------------CAGCAACATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05110
droWil2
CCTTCCC---------TTG-CCACA----AAGTGAG------------CCAGTTGTT---GTTGCTGACGGTTACGTGGATAACGTGAAAATTTGCAATAAAGCA------------------------------GACAACAAA---GCATTAGATCAGAAATTGAAATTTGAGCAACGATTAAAGCATAACGAATGCAATACCGATGAC---AGTAGCAACAT--------------------------------------ACAACAA---------------------------------------------------------------------------------CAACAAGAACG-------------------------------------------------------------------------------------------------A---CAA--------------------------CAAC-----------------------------AAC---------AGCAGCAACAAC--------------------------------------------------------------------------------------------------------------------AAGTAGCTTCTTCAA--ATGAATGTAACGAGTACGT--G--------------------------ACAAA--------------------------------------------------------------------------------------------------------------------------------------ATTCGATCTTCA-----------------ATTGA------------GT-AAAAAA-------------------CSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--------------------------ACAAA--------------------------------------------------------------------------------------------------------------------------------------ATTCGATCTTCA-----------------AT............................................2011.00110000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------------------------CAAC-----------------------------AAC---------AGCAGCAACAAC--------------------------------------------------------------------------------------------------------------------A......................................................................................................................................................................................................................................................................................21200.10200020
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA--------------------------CAAC-----------------------------AAC---------AGCAGCAAC..............................................................................................................................................................................................................................................................................................................................................................................................................18200.10200020
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------------------------CAAC-----------------------------AAC---------AGCAGCAACAAC--------------------------------------------------------------------------------------------------------------------.......................................................................................................................................................................................................................................................................................20200.05100010
dp5
TGTTCCCCG------CCCA-CCACA----AAGTGTC------------CCCGTTGTT---GTTGCTTGTGGTTACGTGGATTACGTGAAAACC------GTCGCA------------------------------AACAACAAGGCCGCCCCAGGGCAGCCATCGGAG--------CCCCCC-----------------------------------------------------------------------------GCAGCAGAGG------------------------------------------------------------------------------------TAGCTGT-------------------------------------------------------------------------------------------------------------A---------------------------------CGGAC---------------TGGC---------AGCAGGAGCA---------------------------------------------------------------------------------------------------------------------------------------A---------ACGCCGAGA--GGAGGAGACCGAAGCATCGCTGGG----------------------------------------------------------------------------------------------------------------------------------------------ATTGGATCTGGG-----------------ATCAG--C--------------CAC--------------------ASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
AAGTGCGAA------AGCC-GCCCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAATACAATCAAGCGCAGCAGCATCAGGTGCGTC--GC----------AAGTACTCGTCGGAGTACAAT----------------------------------------------------CA--------------------------------------------------------------------------------------------------------------------TCATCACCAAGGAGCAGGAGTCAGC---------AGCAGCAGCGAG--------------------------------------------------------------------------------------------------------------------A-------------------------------------CGGGGATACAG----ACCACAAAG----------------------ACTAA-----------GT-CC---------TGGACAAACTCCGC--GCAGCACAAGA-------------------------------------AGTCCACGCAGTC----------CGTTT------CGGTGACGG-------C----A--------TCGCCCA-ACAATGTGA-------------------ASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACAAAG----------------------ACTAA-----------GT-CC---------TGGAC................................................................................................................................................................2213.003300000
............................................................................................................................................................................................................................................................................................CATCAGGTGCGTC--GC----------AAGTACTCGTCGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2813.003300000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAG----ACCACAAAG----------------------ACTAA-----------GT-CC---------TGGAC................................................................................................................................................................2912.002200000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-CC---------TGGACAAACTCCGC--GCAGCAC..............................................................................................................................................2412.002200000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAG----------------------ACTAA-----------GT-CC---------TGGA.................................................................................................................................................................1812.002200000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACAAGA-------------------------------------AGTCCACGCAGTC----------CG............................................................................2311.001001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAA-----------GT-CC---------TGGACAAACTCC.........................................................................................................................................................2011.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAA-----------GT-CC---------TGGACAAACT...........................................................................................................................................................1811.001100000
............................................................................................................................................................................................................................................................................................CATCAGGTGCGTC--GC----------AAGTACT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
........................................................................................................................................................................................................................................................................................................C--GC----------AAGTACTCGTCGGAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.........................................................................................................................................................................................................................................................................................CAGCATCAGGTGCGTC--GC----------AAGTACT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CC---------TGGACAAACTCCGC--GCAGCACA.............................................................................................................................................2411.001100000
.............................................................................................................................................................................................................................................................................................ATCAGGTGCGTC--GC----------AAGTACT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAG----ACCACAAAG----------------------ACTAA-----------...................................................................................................................................................................................2011.001010000
droAna3
ACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC-----------AACA----------------------------GAAGCAAAAA---------------------------------------------------------------------------------------CAACA-------------------------------------------------------------------------------------------------GAAACAACAACATCGA--GTTCATC---------------------AATTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCCACAACAACAAGTGTTTAAG------CCAAA------------AGAGTTCGGCATGAAAT-------------------GGAA---------GCAGCTATA--------CGCTC----------CACTT------CAGTGCAGGTCGGTGCTCCGC-----CG--------C-CCACAAACA-------------------ASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATC---------------------AATTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCCACAAC....................................................................................................................................................................................................1912.002200000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------AGAGTTCGGCATGAAAT-------------------GGAA---------GC............................................................................................................2411.001010000
.CA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC-----------AACA----------------------------GAAGCAAAAA---------------------------------------------------------------------------------------C..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGA--GTTCATC---------------------AATTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGC..........................................................................................................................................................................................................2011.001010000
.CA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC-----------AACA----------------------------GAAGCAAAAA---------------------------------------------------------------------------------------CA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAA------------AGAGTTCGGCATGAAAT-------------------GGAA---------GC............................................................................................................2711.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCGA--GTTCATC---------------------AATTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCCACAA.....................................................................................................................................................................................................2711.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAAGTGTTTAAG------CC..............................................................................................................................................................................1911.001001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTT------CAGTGCAGGTCGGTGCTCCGC-----.........................................2611.001000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTT------CAGTGCAGGTCGGTG....................................................1811.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTCGGCATGAAAT-------------------GGAA---------GC............................................................................................................2211.001000001
...........................................................................................................................................................................................................................................................................AA---------------------------------------------------------------------------------------CAACA-------------------------------------------------------------------------------------------------GAAACAACAACATCGA--GT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAGTGTTTAAG------CCAAA------------AGA............................................................................................................................................................2111.001000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCATC---------------------AATTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCCACAACAACAAGT.............................................................................................................................................................................................2911.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCGGCATGAAAT-------------------GGAA---------G.............................................................................................................1911.001000010
......................................................................................................................................................................................................................AC-----------AACA----------------------------GAAGCAAAAA---------------------------------------------------------------------------------------CAACA-------------------------------------------------------------------------------------------------GA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGCATGAAAT-------------------GGAA---------GC............................................................................................................1811.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA------------AGAGTTCGGCATGAAAT-------------------GGAA---------GC............................................................................................................2611.001000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTCGGCATGAAAT-------------------GGAA---------GCA...........................................................................................................2211.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAA------------AGAGTTCGGCATGAAAT-------------------G..........................................................................................................................2311.001000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT------CAGTGCAGGTCGGTGCT..................................................1911.001100000
...........................................................................................................................................................................................................................................................................AA---------------------------------------------------------------------------------------CAACA-------------------------------------------------------------------------------------------------GAAACAACAACATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.501010000
droBip1
TGCCGGCAT------CACC---GCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC-----------AACAGCAGCAGC-------AACAACA---------------------------CCACCAGCAGTGGGGCA--GC----------CAGCACATGGCTGCCATGCAG----------------------------------------------------CA--------------------------------------------------------------------------------------------------------------------GCAACAGCAGGCGGCC-----CAAC---------AGCAGCAG-----------------------------------------------------------------------------------------------------------------CAGCAA------------------------------------------------------------------------------------------------------------------------------------------GCCCA-GCAGCA---GGCCCAGC---------AACAACAA-----------------------------CAGCAG------CAA-------CAAGC-----GG--------C-GCCGCAACA-------------------GSizeHit CountTotal NormTotal
No Reads
droKik1
AGCGGCTGC------AGTG-GCTGC----CGGTGCG----------------------------------GTAAT-------------------------------------------------------A---------------------------------------------------------------------CAGCGGCCGCAATTGCAG-----------------CAGC-------TACCCCC------GCAGCAGCAG---------------------------------------------------------------CA---------------------GCA----------------------------------------------------------------------------------------------------GCAGCAACAACATCCT-----------------------------------C-------------------------------------C-TCCCGAGCCATTTGGCAATGCTGGTGGCC--------------------------------------------------------------------------------------------------------------------------AG------------CAGCCCT--------ACAA-------------GAAGCAGCGGCTAAGCGAGG-CCAATGCCAGCTCTATGAATCACCT---------GCCACCGCC---ACATCCTCAGC---------AGCAGCAG-----------------------------------------CAG-------CAGCA-----AC--------A-GCAGCAGCA-------------------GSizeHit CountTotal NormTotal
No Reads
droFic1
TGGTGAAGTCGCACTACGTGCCACCGGCGAAGCACG------------CCAGCG----------------AGCAT------------------------------GCA------ACCG-------------------------------------------------------------------------------------------------CAA--------------------CAGGAGCC-------------CCAGCAACAG---------------------------------------------------------------------------------CAACAGCAACAGCAGCAG----------------------------------------------------------------------------------------------CAG--------------------------CAGCAGCAACAGCAACATCAACCGAAG-----CAAC---------AGCAACAG-----------------------------------------------CAACAGTGATAGCAACTGCAGCTGACACTGTGGCAACAGCAACCTTGACGGCGACAACAGGTGCAGCTG----------------------------------------------------------------------------------------------------------------------------------------------------------CAACTGCAGC---------AGCGGAGG-----------------------------------------TGA-------CAACA-----AG--------C-ATTAAAACA-------------------ASizeHit CountTotal NormTotal
No Reads
droEle1
CGGAGCAGC------TGG------------------------------TCAACGATTATTGGCGTCGAGGT-------------------------------------------TTCGA---AACGGGGAA---------------------------------------------------------------------------TACA------AA-----------------TA---ATAATC-------------CCAGCAGCAG---------------------------------------------------------------------------------CAGCAGCAGCAACAGCAG----------------------------------------------------------------------------------------------CAACATCATCAC------A---------------------GCAATGCCAGGGAGCA-----A---------------------------------------------------------------------------------------------------------------------------------------------------------AACGC---------C--------AA------------CAATTTA--------TCAAA--------------------------------------ATCTTAGGGCCGAGCAGCAG---------GCACA-ATTGCT---GCCGCCGC---------CGCCGCCA-----------------------------CCACCG------CCA-------CCACT-----CC--------C-GCAGCAACA-------------------ASizeHit CountTotal NormTotal
No Reads
droRho1
TGGCTTCGC------CCAC-----G-----AGC----ATCGTGA----ACAACAAC-------------AATGGCGTG----------------------------------------------------------------------------------------------------------TGCGTTGTCAA--------------C---TGCAG--------------------CTACACCC-------------CCAGCAGCAA---------------------------------------------------------------CA------------------GCAGCAGCAACATCAG----------------------------------------------------------------------------------------------CAA-----------------------CAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACAACAAC-AACACCAGCAACAA---------TAGCAGCGT--GGTGGAAATCAATAATTG-----------------TGTGC-CAGCA------------------GCCAAAGTGTTCAGTGCAAGTGTTCAGAATAAGCT-------------------AAAT---------AATAATATT--------AGCCCCACAGGCGGGGATATGCAACA------TGT-------TGCTG-----CT--------G-CCACGAGCA-------------------GSizeHit CountTotal NormTotal
No Reads
droBia1
TGGCGCTGC------CTGG-CCTG------------------------CCACCC---------------------------------------------------GCT------GTCGAGATGGTGG-----------------------------------------------------------------------------AGTTGCAACTGC-----------AACA----------------------------GCAGCAGCAG---------------------------------------------------------------------------------CAGCAGCAACAACAGCAG----------------------------------------------------------------------------------------------CAA-----------C------------AT---------CTGCAGCA---------------CAGC---------AGCAGCAGCAAC--------------------------------------------------------------------------------------------------------------------AGC-------CCCA---------------------------------------------------------------------------------------------AGC--------------------------------------TG------------------------------------------------------------------------------------------------------------G-------------------CSizeHit CountTotal NormTotal
No Reads
droTak1
TGGGACTGC------CGCC-C---A--------------------------TGGATTA--CCCGTCGG-----------------------CCTACAGAAGT---TCCGTCGGTCCCAGGATGCC----------GG-------------------------------------------------------------------CATCGCCGCAGC-----------AACAGCAGCAGC-------AACACCA------CCAAC------------------------AGTGGGGCGCTGCCCATGGAGCACAGCATCTGGCGGCCCTGCAGCA---------------------GCA----------------------------------------------------------------------------------------------------GCAG--------------GCCCAACAGGTGCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGCAACAGC-A---------------------------------------------------------------------------------------------------------------------------------------------------GGCGCAGC---------AGCAAGTG-----------------------------------------CAG-------CAGGC-----AC--------C-GCCGCAGCA-------------------GSizeHit CountTotal NormTotal
No Reads
droEug1
TAGCGCCGG------TTCC---ACGG-----G----------------CAAACCGTCACTAACGGACAACTT---------------------------------TTT------GATGCAGCAACATTTAATGCAG----------------------------------------CCAGCCGG-----------------------------------------------------------ACC-------------CCAACAGCA---------------------------------------------------------------------------------------GCAGCA-------------------------------------------------------------------------------------------------G---CAG--------------------------CAGCAACCCTTTGGGCATCAG--------------CAGCAACAACAACAGCAGCAGC-ACATGGACTACGTGACAGAGCTGCTGACCAA---------------GGGTGCGGAGGGTGT--------AG---------GCGGTAT-------------------G---------------------AATGG---------C--------AA------------CCACTTG--------TTGAA--------------------------------------------------------------------------------------------------------------------------------------CTTCAATCTGGACATGG-------C----A--------GCGGCGTACCAGCAAAA-------------------GSizeHit CountTotal NormTotal
No Reads
dm3
TCACGCCGC------CCTC-TTCGC----CAGAGTCCAACCTG-----C--------------------------------------------------------GCA------GCCACAATTACGC------CC----------------------------------------AGCAGCTGGAGGCCA--------------------------------------------------------------------------------------------------------------------------ACGATTTGGCGGCACTGATACAGCAGCAGCAGCAACAGCAACAGCAACA-------------------------------------------------------------------------------------------------G---CAG--------------------------CAGC-----------------------------AGC---------AGCAGCAGCAGC---------------------------------------------------------------------------------------------------------------------------------------------------------------AGCT---------------CAA-------------------------------------TCCACAGCC-------------------------------------CGGCAACTCCACACCCGCTACAGCAATCC-------------------------------------------------------------TG---CGCTTCACC---AGCCAGAGCAATCCCACAATGACGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAATCC-------------------------------------------------------------TG---CGCTTCACC---AGCC....................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................ACGATTTGGCGGCACTGATAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TTTGGCGGCACTGATACAGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................................................................................................TTTGGCGGCACTGATACAGCAGCAGCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................CAGCTGGAGGCCA--------------------------------------------------------------------------------------------------------------------------ACGATTTGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................G-----C--------------------------------------------------------GCA------GCCACAATTACGC------CC----------------------------------------AGCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCAGAGCAATCCCACAATGA..2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTCCACACCCGCTACAG............................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................C-TTCGC----CAGAGTCCAACCTG-----C--------------------------------------------------------GCA------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC---------------------------------------------------------------------------------------------------------------------------------------------------------------AGCT---------------CAA-------------------------------------TCCACAGCC-------------------------------------C..................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................GCGGCACTGATACAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCT---------------CAA-------------------------------------TCCACAGCC-------------------------------------CGGC...............................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................AGTCCAACCTG-----C--------------------------------------------------------GCA------GCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCAACTCCACACCCGC.................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGC---------------------------------------------------------------------------------------------------------------------------------------------------------------AGCT---------------CAA-------------------------------------TCCACAGCC-------------------------------------C..................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAGCAATCC-------------------------------------------------------------TG---CGCTTCACC---AGCCA...................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................GCAACAGCAACA-------------------------------------------------------------------------------------------------G---CAG--------------------------CAGC-----------------------------...................................................................................................................................................................................................................................................................................................................................................................................................................................20200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................AACAGCAACA-------------------------------------------------------------------------------------------------G---CAG--------------------------CAGC-----------------------------AGC---------.......................................................................................................................................................................................................................................................................................................................................................................................................................21200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................GCAACAGCAACA-------------------------------------------------------------------------------------------------G---CAG--------------------------CAGC-----------------------------A..................................................................................................................................................................................................................................................................................................................................................................................................................................21200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................TACAGCAGCAGCAGCAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18130.1520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................CAGCAACA-------------------------------------------------------------------------------------------------G---CAG--------------------------CAGC-----------------------------AGC---------AG.....................................................................................................................................................................................................................................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000100010000000000
.................................................................................................................................................................................................................................................................................................................................................................CAGCAACA-------------------------------------------------------------------------------------------------G---CAG--------------------------CAGC-----------------------------AG.................................................................................................................................................................................................................................................................................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGC---------------------------------------------------------------------------------------------------------------------------------------------------------------AGCT---------------CA.......................................................................................................................................................................................................................18100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................ACAGCAACA-------------------------------------------------------------------------------------------------G---CAG--------------------------CAGC-----------------------------AGC---------A......................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................................................................................................................................................................................................................CAGCAACA-------------------------------------------------------------------------------------------------G---CAG--------------------------CAGC-----------------------------AGC---------AGC....................................................................................................................................................................................................................................................................................................................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................GCAACAGCAACAGCAACA-------------------------------------------------------------------------------------------------G---CAG--------------------------CAGC-----------------------------AGC---------.......................................................................................................................................................................................................................................................................................................................................................................................................................29100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................AACA-------------------------------------------------------------------------------------------------G---CAG--------------------------CAGC-----------------------------AGC---------AGCAGCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................24200.1020000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................ACAGCAGCAGCAGCAACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................AGCAACA-------------------------------------------------------------------------------------------------G---CAG--------------------------CAGC-----------------------------AGC---------AGCAGCA................................................................................................................................................................................................................................................................................................................................................................................................................25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGC---------------------------------------------------------------------------------------------------------------------------------------------------------------AGCT---------------CA.......................................................................................................................................................................................................................17130.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAACAGCAACAGCAACA-------------------------------------------------------------------------------------------------G---C................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26140.0710000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................GCAACAGCAACA-------------------------------------------------------------------------------------------------G---CAG--------------------------CAGC-----------------------------AGC---------AGCAG..................................................................................................................................................................................................................................................................................................................................................................................................................28140.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAACA-------------------------------------------------------------------------------------------------G---CAG--------------------------CAGC-----------------------------AGC---------AGCA...................................................................................................................................................................................................................................................................................................................................................................................................................28190.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAACAGCAACAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---CAG--------------------------CAGC-----------------------------AGC---------AGCAGCAGCAG............................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG--------------------------CAGC-----------------------------AGC---------AGCAGCAGCAGC---------------------------------------------------------------------------------------------------------------------------------------------------------------A...........................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................CAGCAACAGCAACAGCAACA-------------------------------------------------------------------------------------------------G---.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................GCAACAGCAACA-------------------------------------------------------------------------------------------------G---CAG--------------------------CAGC-----------------------------AGC---------AGCA...................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................AACA-------------------------------------------------------------------------------------------------G---CAG--------------------------CAGC-----------------------------AGC---------AGCAGC.................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAACAGCAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................AACAGCAACAGCAACA-------------------------------------------------------------------------------------------------G---C................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................CAGCAACA-------------------------------------------------------------------------------------------------G---CAG--------------------------CAGC-----------------------------AGC---------AGCAGCAG...............................................................................................................................................................................................................................................................................................................................................................................................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................ACA-------------------------------------------------------------------------------------------------G---CAG--------------------------CAGC-----------------------------AGC---------AGCAGCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................AACAGCAACAGCAACA-------------------------------------------------------------------------------------------------G---CAG--------------------------C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................CAACA-------------------------------------------------------------------------------------------------G---CAG--------------------------CAGC-----------------------------AGC---------AGC....................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAGCAACAGCAACA-------------------------------------------------------------------------------------------------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................GCAGCAACAGCAACAGCAACA-------------------------------------------------------------------------------------------------G---C................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................CAACAGCAACA-------------------------------------------------------------------------------------------------G---CAG--------------------------CAGC-----------------------------AGC---------AGC....................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAACAGCAACA-------------------------------------------------------------------------------------------------G---CAG--------------------------CA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................CAACA-------------------------------------------------------------------------------------------------G---CAG--------------------------CAGC-----------------------------AGC---------AGCAG..................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................ACA-------------------------------------------------------------------------------------------------G---CAG--------------------------CAGC-----------------------------AGC---------AGCAGCA................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAG--------------------------CAGC-----------------------------AGC---------AGCAGCAGCAGC---------------------------------------------------------------------------------------------------------------------------------------------------------------............................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAGCAACAGCAACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................CAACA-------------------------------------------------------------------------------------------------G---CAG--------------------------CAGC-----------------------------AGC---------AGCAGCA................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAACA-------------------------------------------------------------------------------------------------G---CAG--------------------------CAGC-----------------------------AGC---------AG.....................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................AGCAACA-------------------------------------------------------------------------------------------------G---CAG--------------------------CAGC-----------------------------AGC---------AGC....................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAACAGCAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAGCAACAGCAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................ACAGCAACAGCAACA-------------------------------------------------------------------------------------------------G---CAG--------------------------CAGC-----------------------------A..................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TGTCGCAGT------ATTT-CCAGCAGCT-------CAACTCG-----CAAGTT---------------------------------------------------GCT------GCTGCAGCGGCGGGCAA---------------------------------------------------------------------TAGCGGTG------GC-----------AACAGCAGCAGC-------AACAACA------ACAACAACAA---------------------------------------------------------------CA---------------------GCA----------------------------------------------------------------------------------------------------GCGG--------------CAACAACAGCAGCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGCAACAGC-GACAGCGGCAATGA---------TGGCAGCAT--G--------------------------ACAGG--------------------------------------ATCCT-----CGGGAACCAT---------GG----------ACAACCATCGC---------AGCAGTGT-----------------------------------------TAG-------CAGCA-----AT--------G-ATTCGGGCAAGAGTAGCGCCACAG-GAGGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................................................................................AA---------------------------------------------------------------------TAGCGGTG------GC-----------AACAGCAGCAGC-------AACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100010000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGC---------AGCAGTGT-----------------------------------------TAG-------CAGCA-----AT--------G-AT...........................2511.00100000000001000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGGGCAAGAGTAGCGCC.........1911.00101000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA-----AT--------G-ATTCGGGCAAGAGTAGCGCCA........2811.00101000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT-----------------------------------------TAG-------CAGCA-----AT--------G-ATTCGGGC.....................2111.00100100000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-ATTCGGGCAAGAGTAGCGC..........2011.00101000000000000000
...........................................................................................................................................................................................................................................................................AA---------------------------------------------------------------CA---------------------GCA----------------------------------------------------------------------------------------------------GCGG--------------CAACAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1870.14110000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGCAGCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGC..........................................................................................................................................................................................................................................................................................19120.08100000000000100000
droSec2
TAACGCTGC------CAGT-CAGGA----CAGCACG------------CCTGC----------------------------------------------------TCA------ACGG--------------------------------------CAACTGTTGCGG--------CCGATTGC----A------------GGCGAC------AGCAGGAACAGGGG--------------------------------C------------------------------------------------------------------------------------------------CAGCA-------------------------------------------------------------------------------------------------GGGGCACCAACACT-------------------------------------------------------------------GCCGGCAGCAACACGGTCAACATG-CAGACC--CAGACCGACGATGAGTTGCTGCCG-------------CTGTTAGCC--ATGCTCCCACAAGACGCTCCCACA------------------ACAAC-A---------------------------------------------------------------------------------------------------------------------------------------------------GGAG--------------------------------------------------------------C-------------------AGC-------A-GCAGGAGCA-------------------GSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
TGTCGCAGT------ATTT-CCAGCAGCT-------CAACTCG-----CAAGTT---------------------------------------------------GCT------GCCGCAGCGGCGGGCAA---------------------------------------------------------------------TGGCGGTG------GC-----------AACAGCAGCAGC-------AACAATAGCAACAATAACAACAA---------------------------------------------------------------CA---------------------GCA----------------------------------------------------------------------------------------------------GCGG--------------CAACAACAGCAGCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGCAACAGC-GACAGCGGCAACGA---------TGGCAGCAT--G--------------------------ACAGG--------------------------------------ATCCT-----CAAGCACCAT---------GG----------ACAACCATCGC---------AGCAGTGT-----------------------------------------CAG-------CAGCA-----AT--------G-ATTCGGGCAAGAGTAGCGCCACAG-GAGGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT-----------------------------------------CAG-------CAGCA-----AT--------G-ATTCGGGCAAG..................2411.00100000010000
.......GT------ATTT-CCAGCAGCT-------CAACTCG-----CAAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGC-GACAGCGGCAAC.......................................................................................................................................................................................................................................................................2011.00101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGC---------AGCAGTGT-----------------------------------------CAG-------CAGCA-----AT--------G-ATTCGGG......................2911.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGCAACAGC-GACAGCGGCA.........................................................................................................................................................................................................................................................................2511.00101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--------------------------ACAGG--------------------------------------ATCCT-----CAAGCACCAT---------..............................................................................................................................................2111.00100000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-ATTCGGGCAAGAGTAGCGC..........2011.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGT-----------------------------------------CAG-------CAGCA-----AT--------G-ATTCGGGCA....................2511.00110000000000
.......................................................................................................................................................................................................................................................................CAACAA---------------------------------------------------------------CA---------------------GCA----------------------------------------------------------------------------------------------------GCGG--------------CAACAACAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
...CGCAGT------ATTT-CCAGCAGCT-------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
....................................................................................................................CGCAGCGGCGGGCAA---------------------------------------------------------------------TGGCGGTG------GC-----------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
.........................AGCT-------CAACTCG-----CAAGTT---------------------------------------------------GC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
...................................................................................................................................................................................................................................AACAGCAGCAGC-------AACAATAGCAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
...........................................................................................................................................................................................................................................................................AA---------------------------------------------------------------CA---------------------GCA----------------------------------------------------------------------------------------------------GCGG--------------CAACAACAGCAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGC---------AGCAGTGT-----------------------------------------CAG-------CAGCA-----AT--------G-A............................2311.00100000100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-------CAGCA-----AT--------G-ATTCGGGCAAG..................2011.00101000000000
......................................................................................................................................................................................................................................................................ACAACAA---------------------------------------------------------------CA---------------------GCA----------------------------------------------------------------------------------------------------GCGG--------------CAACAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2250.20101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--------------CAACAACAGCAGCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGC..........................................................................................................................................................................................................................................................................................2050.20100001000000
.....................................................................................................................................................................................................................................................................AACAACAA---------------------------------------------------------------CA---------------------GCA----------------------------------------------------------------------------------------------------GCGG--------------CAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2070.14101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGCAAC.......................................................................................................................................................................................................................................................................................1990.11100100000000
.....................................................................................................................................................................................................................................................................AACAACAA---------------------------------------------------------------CA---------------------GCA----------------------------------------------------------------------------------------------------GCGG--------------C..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18110.09100100000000
droEre2
TAACTCCGA------CACG-CCCC-------T-------CGTGCCACGCCCACC------GTTCCTG--AGTCGC------------------------------GCC------GCTG-------------------------------------------------------------------------------------------------CAA--------------------CGGCCGCC-------------GCCGCAGCAG---------------------------------------------------------------------------------CAGCAGCAGCGGCGGCAGCGGCGCTCAGCATCAGCAACAACAGCAACAATTCGGCGGGATCAGCGGGCCAGCTGCCGCACAGCACGAGCAGCAGCAGCAACAACAACAACAACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAAC-A------------A----------------------------------------TGGG---TCTAACTCCGT-----------------------------------------------------------------------------TAA--------------------------------------------------------------C-------------------AGC-------A-ACGCCAACA-------------------ASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCGGCGGCAGCGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.2510000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAACAACAACAACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAAC-...................................................................................................................................................................................................................................................................................2780.1310000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAACAACAACAACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC.......................................................................................................................................................................................................................................................................................22200.0511000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAACAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000010
...........................................................................................................................................................................................................................................................................AG---------------------------------------------------------------------------------CAGCAGCAGCGGCGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510100000
....................................................................................................................................................................................................................................................CC-------------GCCGCAGCAG---------------------------------------------------------------------------------CAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0511000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAACAACAACAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000010

Generated: 05/16/2015 at 09:18 PM