ID:

dvi_8214

 Coordinate:

scaffold_12928:256414-256550 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [dvir_GLEANR_17211:1]; exon [dvir_GLEANR_17211:2]; CDS [Dvir\GJ16709-cds]; CDS [Dvir\GJ16709-cds]; intron [Dvir\GJ16709-in]

Repeatable elements

NameClassFamilyStrand
(CA)nSimple_repeatSimple_repeat+
mature
star
  1. scaffold_12726:381726-381745 +
  2. scaffold_12875:5543757-5543776 +
  3. scaffold_12875:15799575-15799594 +
  4. scaffold_12875:18814429-18814448 +
  5. scaffold_12928:143364-143383 +
  6. dvi_8214  scaffold_12928:256456-256475 +
  7. scaffold_12928:5285637-5285656 +
  8. scaffold_12928:5285657-5285676 +
  9. scaffold_12970:3141083-3141102 +
  10. scaffold_12970:3793927-3793946 +
  11. scaffold_12970:3820912-3820931 +
  12. scaffold_12970:4291724-4291743 +
  13. scaffold_12970:4600186-4600205 +
  14. scaffold_13042:567187-567206 +
  15. scaffold_13042:3085386-3085405 +
  16. scaffold_13042:3519713-3519732 +
  17. scaffold_13047:5899429-5899448 +
  18. scaffold_13047:18504836-18504855 +
  19. scaffold_13049:19586661-19586680 +
  20. scaffold_13049:21111025-21111044 +
  21. scaffold_4719:14-33 +
  22. scaffold_4719:274-293 +
  23. scaffold_9304:203-222 +
  24. scaffold_12726:1179915-1179934 +
  25. scaffold_12855:2211120-2211139 +
  26. scaffold_12875:889414-889433 +
  27. scaffold_12875:920689-920708 +
  28. scaffold_12875:5463631-5463650 +
  29. scaffold_12875:19711677-19711696 +
  30. dvi_9236  scaffold_12928:7251299-7251318 +
  31. scaffold_12928:7687645-7687664 +
  32. scaffold_12963:7784589-7784608 +
  33. scaffold_12970:4003526-4003545 +
  34. scaffold_12970:7371968-7371987 +
  35. scaffold_12970:11122634-11122653 +
  36. scaffold_13047:938493-938512 +
  37. scaffold_13047:11392933-11392952 +
  38. scaffold_13047:13532138-13532157 +
  39. scaffold_13049:3012273-3012292 +
  40. scaffold_13246:1296844-1296863 +
  41. scaffold_12822:2308039-2308058 +
  42. scaffold_12855:3170386-3170405 +
  43. scaffold_12875:15799555-15799574 +
  44. scaffold_12875:16897736-16897755 +
  45. scaffold_12875:20250162-20250181 +
  46. scaffold_12928:3709275-3709294 +
  47. scaffold_12928:5043564-5043583 +
  48. scaffold_12928:6609096-6609115 +
  49. scaffold_12963:1154168-1154187 +
  50. scaffold_12963:10019252-10019271 +
  51. scaffold_12963:14642399-14642418 +
  52. scaffold_12970:4499793-4499812 +
  53. scaffold_12970:4896744-4896763 +
  54. scaffold_12970:6200457-6200476 +
  55. scaffold_13042:2016900-2016919 +
  56. scaffold_13047:18243025-18243044 +
  57. scaffold_13049:2868490-2868509 +
  58. scaffold_13049:21111005-21111024 +
  59. scaffold_13049:21595937-21595956 +
  60. scaffold_13246:858061-858080 +

Sense Strand Reads

##################################################-----------------------------------------------------------------------------------------------------------------------------------------##################################################
TTGATGATTTCGTCTACTTAATAAATCACGTGCTGCTTGGCGAAGAGCCGGTAAGTAGAAGCAACAACAACAACATCAAGACCGCACACACACACACACACACAGACACACACAAACACACATACAGTGCTACCAGACAACACTAATCGAATTTATAATTGATTTTCATCTTCTATGCTCTAATCAGACCATCGAGGATTTCATATTGCTTGTTGGCACACTGGTGGCCTTCATAGC
*******************************************************************.............................................***************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060686
Argx9_0-2h_embryos_total
 V116
male body		 SRR060674
9x140_ovaries_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060677
Argx9_ovaries_total
 SRR060676
9xArg_ovaries_total
 SRR060680
 9xArg_testes_total
 SRR060664
9_males_carcasses_total
 SRR060675
140x9_ovaries_total
 SRR060654
160x9_ovaries_total
 SRR060660
Argentina_ovaries_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060663
160_0-2h_embryos_total
 SRR060671
9x160_males_carcasses_total
 SRR060687
9_0-2h_embryos_total
 SRR060658
140_ovaries_total
 SRR060688
160_ovaries_total
 V053
head
 SRR060684
140x9_0-2h_embryos_total
 SRR060666
160_males_carcasses_total
 SRR060678
9x140_testes_total
 M061
embryo
 SRR060668
160x9_males_carcasses_total
........TTCGTCTACTTAATAAATCACGTGC............................................................................................................................................................................................................ 25 0 1 5.00 5 0 1 0 0 0 1 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............CTACTTAATAAATCACGTGCTGCTT....................................................................................................................................................................................................... 25 0 1 2.00 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................AGAAGCAACAACAACAACATCGAGA............................................................................................................................................................ 25 1 2 1.50 3 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................AATAGAAGCAACAACAACAACATCGAGA............................................................................................................................................................ 28 2 6 1.17 7 0 0 0 0 0 2 1 0 0 1 0 0 0 0 0 0 0 0 0 2 0 1 0 0
..........................CACGTGCTGCTTGGCGAAGAGCC............................................................................................................................................................................................ 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.......TTTCGTCTACTTAATAAATCACGTGC............................................................................................................................................................................................................ 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................TCACGTGCTGCTTGGCGAAGA............................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................GACACCACTAATCGAATTTAT................................................................................. 21 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................TGCTGCTTGGCGAAGAGCCGACC........................................................................................................................................................................................ 23 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................CTTAATAAATCACGTGCTGCTTG...................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
........TTCGTCTACTTAATAAATCACG............................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................TAATAAATCACGTGCTGCT........................................................................................................................................................................................................ 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................CCACATCCAGTGCTACCAGAC................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................CAACAACATCAAGACCGCACA..................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................AGCCGACCATCGAGGATTT.................................... 19 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........TTCGTCTACTTAATAAATCACGTGCTGC......................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................CTTGTTGGCACACTGGTGG.......... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................CTTGTTGGCACACTGGTGGT......... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................GTGCTGCTTGGCGAAGAGCC............................................................................................................................................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................ACGTGCTGCTTGGCGAAGAGCCTT.......................................................................................................................................................................................... 24 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TAGAAGCAACAACAACAACATCGA.............................................................................................................................................................. 24 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...............................GCTGCTTGGCGAAGACACG........................................................................................................................................................................................... 19 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................AATAGAAGCAACAACAACAACATCGAG............................................................................................................................................................. 27 2 6 0.33 2 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................AGAAGCAACAACAACAACATCGAGAT........................................................................................................................................................... 26 2 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TGGCACAGTGGTTGCCTGCATA.. 22 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.............................................................CAACAACAACAACATCAAGA............................................................................................................................................................ 20 0 6 0.33 2 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................GTGCTGCTAGGCGAAGCG.............................................................................................................................................................................................. 18 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
........................................................AGAAGCAACAACAACAACATCG............................................................................................................................................................... 22 1 14 0.14 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
........................................................AGAAGCAACAACAACAACATCGA.............................................................................................................................................................. 23 1 7 0.14 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................AGAATGCTTGTTGGGACACT............... 20 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..............................................................AACAACAACAACATCAAGA............................................................................................................................................................ 19 0 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.......................TATCGCGTGCTGCTTGGC.................................................................................................................................................................................................... 18 2 15 0.07 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................CACACACACACAGACACACA............................................................................................................................. 20 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................ACACACACACAGACACACAC............................................................................................................................ 20 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

AACTACTAAAGCAGATGAATTATTTAGTGCACGACGAACCGCTTCTCGGCCATTCATCTTCGTTGTTGTTGTTGTAGTTCTGGCGTGTGTGTGTGTGTGTGTGTCTGTGTGTGTTTGTGTGTATGTCACGATGGTCTGTTGTGATTAGCTTAAATATTAACTAAAAGTAGAAGATACGAGATTAGTCTGGTAGCTCCTAAAGTATAACGAACAACCGTGTGACCACCGGAAGTATCG
*****************************************************************************************************************************.............................................******************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR060686
Argx9_0-2h_embryos_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060682
9x140_0-2h_embryos_total
 M047
female body
 SRR060687
9_0-2h_embryos_total
 SRR060685
9xArg_0-2h_embryos_total
 V053
head
 V116
male body		 SRR060689
160x9_testes_total
 SRR060678
9x140_testes_total
 SRR060655
9x160_testes_total
 SRR060679
140x9_testes_total
 SRR060665
9_females_carcasses_total
...............TGAATTATTTGGTGGACG............................................................................................................................................................................................................ 18 2 4 18.25 73 23 20 18 0 6 6 0 0 0 0 0 0 0
.........................................................................................................................................................................................TCTGGTAGCTCCTAAAGTATA............................... 21 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0
...............TGAATTATTTGGTGGACGC........................................................................................................................................................................................................... 19 3 20 2.00 40 8 7 11 0 6 1 0 7 0 0 0 0 0
............................................................................GTTCTGGCGTGTGTGTGTGT............................................................................................................................................. 20 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................GTTCTGGCGTTTGTGTGAGTGTGT......................................................................................................................................... 24 2 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................TTGTGTGATTGGCACGATGGT...................................................................................................... 21 3 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0 0
............................................................................................................GTGTGTTTGTGTGTATGTC.............................................................................................................. 19 0 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0 0 0
..............ATGAATTATTTGGTGGACGC........................................................................................................................................................................................................... 20 3 6 0.17 1 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................TATCTTCGTTGTTGTTGTTGTAGCTCT............................................................................................................................................................ 27 2 7 0.14 1 0 0 0 0 0 0 0 0 0 1 0 0 0
.........................................................CTTCGTTGTTGTTGATGTAGT............................................................................................................................................................... 21 1 8 0.13 1 0 0 0 0 0 0 0 0 0 0 1 0 0
.....................................................................TGTCGTAGTTCTGGCATG...................................................................................................................................................... 18 2 8 0.13 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................TAGTAATAAAAAGTAGAAGATA............................................................. 22 3 17 0.12 2 0 1 0 0 0 0 0 0 0 0 0 0 1
........................................................................................................................................................................................GTCTGCTAGTTCCTTAAGTA................................. 20 3 9 0.11 1 0 0 0 0 0 0 0 0 1 0 0 0 0
.................................................................................................TGTGTGTCTGTGTGTGTTTG........................................................................................................................ 20 0 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 1 0
...........................................................................................................................................TGTGAATAGCTCAAATAGTA.............................................................................. 20 3 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0
.....................................................................................................................................................................AGTAGAAGATAGGGGATTG..................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12928:256364-256600 + dvi_8214 TTGATGATTTCGTCTACTTAATAAATCACGTGCTGCTTGGCGAAG-AGCCGGTAAGT---AGAAGCA------------ACAA--------------CAACAACATC-------------------------------------------------------------------------------------------------------------AAGACCGCACACACACACACACACACAGACACACACAAACACACATAC----------------AGTGCTACCAGAC-----AACACTA-ATCGAATTTATA----------------ATTGATTTTCATC-TTCTATGCTCTAATCAGACCATCGAGGATTTCATATTGCTTGTTGGCACACTGGTGGCCTTCA-T-----------------------AGC
droMoj3 scaffold_6328:563577-563787 - TTGATGATTTTGTCTATTTAATAAATCACGTGCTGCTTGGCGAGG-AGCCGGTAAGT---AGCAATAACAATAAGAACAACAATAAACCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTAGAACAGTAGCGTTGCCAGAC-----AAATCTAGAGAGGACTTCTA----------------ATTGATTTTCATTATTTGTGCTTATATTTAGACCATTGAGGATTTCATATTGCTTGTGGGCACATTGGTGGCCTTCA-T-----------------------AGC
droGri2 scaffold_15203:6720572-6720799 + TTGATGATTTCATTTATCTAATTAATCATGTGCTGCTTGGCGAAG-AGCCGGTAAGT---CACAACA------------ACAA--------------CAACA---------------------------------------------------------------------------------------------------------------------------------------CAAATAATATTACGCACACAAAGACAG----------------TCGGCAACAGTA-AAAATAATAACA-ACAACAA---CAACTACCACACGCAGACATTGATTTAATTC-TCTTCTCTCACATTCAGACTATTGAGGATTTCATACTGCTTGTGGGCACACTGGTGGCCTTCA-T-----------------------AGC
droWil2 scf2_1100000004909:3713174-3713430 - TCGATGATTTGTTTTATCTGGTTAATCATGTGTTGCTGGGCGAAG-AGCCGGTAAGT---GAGACTG--AATAAGATACACAATA---CACGCACAT----------ATCCTGTATATATGTACAGATATATATGTATATGTGTACGTAAATTTATATGTACATACATATATATAGATATATCCGCTTCCGTATTTC----------CAAC-------TAAC----------------------------------------------------------------------------------------------------------------ATTGA----------TTTTGTTCATATTTAGACTATCGAGGATTTCATATTGCTTGTGGGCACTATGGTGGCCTTTA-T-----------------------AGC
dp5 XL_group1e:522466-522671 + TCGATGATTTTGTTTATTTAATTAATCATGTGCTACTAGGCGAAG-AGCCGGTAAGT---AAGACC------------TACATTAAAGCATGCACAC----------ATT---------CGTACGGCTGTATGTGTGCATGT----------------------------------------------------------------------------------------------------------------GCATATGTACGTGAGACTGAAATCGT----------------------------------------------------ACATTGA----------TTTTGTCCATGTGTAGACCATTGAGGACTTCATATTGCTTGTGGGTACATTAGTAGCATTCA-T-----------------------AGC
droPer2 scaffold_30:691700-691905 - TCGATGATTTTGTTTATTTAATTAATCATGTGCTACTAGGCGAAG-AGCCGGTAAGT---AAGACC------------TACATTAAAGCATGCACAC----------ATT---------CGTACGGCTGTATGTGTGCATGT----------------------------------------------------------------------------------------------------------------GCATATGTACGTGAGACTGAAATCGT----------------------------------------------------ACATTGA----------TTTTGTCCATGTGTAGACCATTGAGGACTTCATATTGCTTGTGGGTACATTAGTAGCATTCA-T-----------------------AGC
droAna3 scaffold_13117:1532552-1532676 + CACACA--CACAAACACACAAACACACACACACAGTCATGCACGA-GGCAGATGAAT---GCCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAGCCTATAC----------------TTGAA---------CCCCAGCTTCG-TCGAAGGACGAAGGACCTCGAATGA------------AAGGCAACTTTCA----------------------------
droBip1 scf7180000395565:6149-6290 - AAAAAAAATAAAACAAA--AACCATTCACAAGCAGA-----------------------------------------------------------------------------------------------CACACGTACAC----------------------------------------------------------------------------------------------------------------ACACACACACACCAAAGCGCACCCAC--------AGAGC-----GACGCTG-AG----------G----------------ATGG----------GTTGGCTTTGT-T-------------------------------------AGTTATTATTTAATCGGTGTGTCCAATTCTTGGTGAGATC
droKik1 scf7180000302469:71850-71998 + C----------------------------GTCCTTCTGGGCCATGCAATCTGCAAAA---TGAAGCG------------AAAA--------------TGTTTCTAGC-------------------------------------------------------------------------------------------------------------AAGCACACACACACACACACACACACACACACACACACACACACACAC----------------ACAGCAACCCGC----------------------CATAG----------------TTGAA---------ACCCCCCTCTT-T-------------------------------------AGTCAACTTTCAAC-----------------------CCC
droFic1 scf7180000453495:199947-200102 - TCGATGACTTTGTCTATCTCATTAATCATGTGTTGCTGGGCGAGG-AGCCGGTAAGT---GGTTT-----------------------------------------------------------------------------------------------------------------G--CATGCTGCCG-ATCCC----------CGAC-------AGTC----------------------------------------------------------------------------------------------------------------ACTGA----------CTTCGTCCCTATGCAGACCATTGAGGATTTCATTCTGCTGGTGGGCACTTTGGTGGCGTTTA-T-----------------------AGC
droEle1 scf7180000491087:449949-450126 + TCGATGACTTTGTCTATCTGATCAATCATGTGCTGCTGGGCGAGG-AGCCGGTAAGCTATAGGCT------------------------------------------ATG----------------CCGTATGC---C----------------------------------------A--TATGCCGCCG-ATCCC----------CATC-------AGAT---------------------------------------------------------------------------------------AATTTGATAA---------------TTTGA----------CCCTGTCCA---TCAGACCATCGAGGATTTCATACTGCTCGTGGGCACACTGGTGGCGTTCA-T-----------------------AGC
droRho1 scf7180000779844:17097-17253 - TCGATGACTTTGTCTATCTGATCAATCATGTGCTGCTGGGCGAGG-AGCCGGTAAGT---CGGCT-----------------------------------------------------------------------------------------------------------------A--TATGCCGCCG-ATCCC----------CACC-------AGAC----------------------------------------------------------------------------------------------------------------ATTGAT---------TTTTGCCCTTGTCCAGACCATCGAGGACTTCATACTGCTCGTGGGCACACTGGTGGCGTTCA-T-----------------------AGC
droBia1 scf7180000301467:29783-29939 + TCGACGACTTTGTCTATTTGATCAATCATGTACTGTTGGGAGAGG-AGCCGGTAAGT---GGGCC-----------------------------------------------------------------------------------------------------------------C--CGCGCTTCCG-ATCAA----------CAGC-------AGAC----------------------------------------------------------------------------------------------------------------ATTAAC---------TTTATACCTTGCACAGACAATCGAAGACTTCATTTTGCTGGTTGGCACACTGGTGGCGTTTA-T-----------------------AGC
droTak1 scf7180000415769:107806-107962 - TCGATGACTTTGTCTATCTGATAAATCATGTGCTGCTGGGCGAGG-AGCCGGTAAGT---GGACT-----------------------------------------------------------------------------------------------------------------G--AGTGCCGCCG-ATCAC----------CACC-------ACGC----------------------------------------------------------------------------------------------------------------ATTGAC---------TTTCCACCTTGTACAGACCATCGAGGACTTTATATTGCTAGTGGGGACCCTGGTGGCGTTTA-T-----------------------AGC
droEug1 scf7180000408987:39455-39629 + TTGATGACTTTGTCTATCTGATTAATCATGTGCTGCTGGGTGAGG-AGCCGGTAAGT---GAGCT-----------------------------------------------------------------------------------------------------------------T--CATACCGCCG-ATCCT----------CATCAATCACAAGAC---------------------------------------------------------------------------------------A--TTGACAC--------------------CTTGTACC-TTGTATACCTTGTGCAGACCATTGAGGACTTCATATTGCTGGTGGGCACTTTGGTGGCATTTA-T-----------------------AGC
dm3 chrXHet:60771-60937 - TTGATGACTTTGTCTATCTAATCAATCATGTGCTGCTGGGCGAGG-AGCCGGTAAGT---GGACT-----------------------------------------------------------------------------------------------------------------T--CATGGGGCCA-ATACCATTTAGTACTCACA-------AGAC----------------------------------------------------------------------------------------------------------------ATGCCT---------TTTCGGCCTTCTGTAGACCATCGAGGACTTCATACTGCTGGTAGGCACCCTGGTGGCATTTA-T-----------------------AGC
droSim2 2r:3191656-3191822 + TTGATGACTTTGTCTATCTAATCAATCATGTGCTGCTGGGCGAGG-AGCCGGTAAGT---GGGCT-----------------------------------------------------------------------------------------------------------------T--CATGGGGCCA-ATACCATTCAGTACTCACC-------TGGC----------------------------------------------------------------------------------------------------------------ATGCCC---------TTTCGGCCTTCTGTAGACCATCGAGGACTTCATACTGCTGGTGGGCACCCTGGTGGCATTTA-T-----------------------AGC
droSec2 scaffold_109:35307-35473 + TTGATGACTTTGTCTATCTAATCAATCATGTGCTGCTGGGCGAGG-AGCCGGTAAGT---GGGCT-----------------------------------------------------------------------------------------------------------------T--CATGGGGCCA-ATACCATTCAGTACTCACC-------TGGC----------------------------------------------------------------------------------------------------------------ATGCCC---------TTTCGGCCTTCTGTAGACCATCGAGGACTTCATACTGCTGGTGGGCACCCTGGTGGCATTTA-T-----------------------AGC
droYak3 chrXh:136514-136682 + TTGATGACTTTGTCTATCTGATCAATCATGTGCTTCTGGGCGAGG-AGCCGGTAAGT---GGGCT------------------------------------------AT---------------------------------------------------------------------A--CATGCGGCCA-ATCCCATTCAGTACTCACC-------AGAC----------------------------------------------------------------------------------------------------------------ATGGAC---------TTTCGGCCTTCTGTAGACCATCGAAGACTTCATACTGCTGGTGGGCACCCTGGTGGCGTTTA-T-----------------------AGC
droEre2 scaffold_4690:18714953-18715119 - TTGATGACTTTGTCTATCTGATCAATCATGTGCTGCTGGGCGAGG-AGCCGGTAAGT---GGGCT-----------------------------------------------------------------------------------------------------------------A--CATGCGGCCA-ATTGCATTCAGAATTCACC-------AGAC----------------------------------------------------------------------------------------------------------------ATGGAC---------TTTCGGCCTTCTGTAGACCATCGAGGACTTCATACTGCTAGTGGGCACCCTGGTGGCGTTTA-T-----------------------AGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TTGATGATTTCGTCTACTTAATAAATCACGTGCTGCTTGGCGAAG-AGCCGGTAAGT---AGAAGCA------------ACAA--------------CAACAACATC-------------------------------------------------------------------------------------------------------------AAGACCGCACACACACACACACACACAGACACACACAAACACACATAC----------------AGTGCTACCAGAC-----AACACTA-ATCGAATTTATA----------------ATTGATTTTCATC-TTCTATGCTCTAATCAGACCATCGAGGATTTCATATTGCTTGTTGGCACACTGGTGGCCTTCA-T-----------------------AGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........TTCGTCTACTTAATAAATCACGTGC......................................................................................................................................................................................................................................................................................................................................................................................................................2515.005000000000000000000000000011100100000100000000000000000000000000
.............CTACTTAATAAATCACGTGCTGCTT.................................................................................................................................................................................................................................................................................................................................................................................................................2512.002000000000000000000000000000000001000010000000000000000000000000
..........................CACGTGCTGCTTGGCGAAG-AGCC.....................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000001000000000000000000000000000000000000000000000000000
.......TTTCGTCTACTTAATAAATCACGTGC......................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000100000000000000000000000000000000000000
.........................TCACGTGCTGCTTGGCGAAG-A........................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000100000000000000000000000000000000000000000
..............................TGCTGCTTGGCGAAG-AGCCGACC.................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010000000000000000000000000000000000000000000000000000000000
................CTTAATAAATCACGTGCTGCTTG................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000010000000000000000000000000000000000000000000000000
........TTCGTCTACTTAATAAATCACG.........................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
..................TAATAAATCACGTGCTGCT..................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000100000000000000000000000000
.................................................................................................CAACAACATC-------------------------------------------------------------------------------------------------------------AAGACCGCACA....................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
........TTCGTCTACTTAATAAATCACGTGCTGC...................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000000001000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................CTTGTTGGCACACTGGTGG..................................1911.001000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................................................................................................................................................................................................................................................................................................CTTGTTGGCACACTGGTGGT.................................2011.001001000000000000000000000000000000000000000000000000000000000000
.............................GTGCTGCTTGGCGAAG-AGCC.....................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000010000000000000000000000000000000000000000000000000000
...........................ACGTGCTGCTTGGCGAAG-AGCCTT...................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000010
.................................................................CA------------ACAA--------------CAACAACATC-------------------------------------------------------------------------------------------------------------AAGA...........................................................................................................................................................................................................................2060.332001000000000001000000000000000000000000000000000000000000000000
............................................................AGAAGCA------------ACAA--------------CAACAACATC-------------------------------------------------------------------------------------------------------------G..............................................................................................................................................................................................................................22140.142001000001000000000000000000000000000000000000000000000000000000
..................................................................A------------ACAA--------------CAACAACATC-------------------------------------------------------------------------------------------------------------AAGA...........................................................................................................................................................................................................................1980.131000100000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................CACACACACACAGACACACA............................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................ACACACACACAGACACACAC...........................................................................................................................................................................................20200.051000000000000000000100000000000000000000000000000000000000000000
droMoj3
TTGATGATTTTGTCTATTTAATAAATCACGTGCTGCTTGGCGAGG-AGCCGGTAAGT---AGCAATAACAATAAGAACAACAATAAACCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTAGAACAGTAGCGTTGCCAGAC-----AAATCTAGAGAGGACTTCTA----------------ATTGATTTTCATTATTTGTGCTTATATTTAGACCATTGAGGATTTCATATTGCTTGTGGGCACATTGGTGGCCTTCA-T-----------------------AGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
TTGATGATTTCATTTATCTAATTAATCATGTGCTGCTTGGCGAAG-AGCCGGTAAGT---CACAACA------------ACAA--------------CAACA---------------------------------------------------------------------------------------------------------------------------------------CAAATAATATTACGCACACAAAGACAG----------------TCGGCAACAGTA-AAAATAATAACA-ACAACAA---CAACTACCACACGCAGACATTGATTTAATTC-TCTTCTCTCACATTCAGACTATTGAGGATTTCATACTGCTTGTGGGCACACTGGTGGCCTTCA-T-----------------------AGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.............................................................................................................................................................................................................................................................................................................................................................................................TACTGCTTGTGGGCACACTGGTG...................................2311.00110
droWil2
TCGATGATTTGTTTTATCTGGTTAATCATGTGTTGCTGGGCGAAG-AGCCGGTAAGT---GAGACTG--AATAAGATACACAATA---CACGCACAT----------ATCCTGTATATATGTACAGATATATATGTATATGTGTACGTAAATTTATATGTACATACATATATATAGATATATCCGCTTCCGTATTTC----------CAAC-------TAAC----------------------------------------------------------------------------------------------------------------ATTGA----------TTTTGTTCATATTTAGACTATCGAGGATTTCATATTGCTTGTGGGCACTATGGTGGCCTTTA-T-----------------------AGCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
dp5
TCGATGATTTTGTTTATTTAATTAATCATGTGCTACTAGGCGAAG-AGCCGGTAAGT---AAGACC------------TACATTAAAGCATGCACAC----------ATT---------CGTACGGCTGTATGTGTGCATGT----------------------------------------------------------------------------------------------------------------GCATATGTACGTGAGACTGAAATCGT----------------------------------------------------ACATTGA----------TTTTGTCCATGTGTAGACCATTGAGGACTTCATATTGCTTGTGGGTACATTAGTAGCATTCA-T-----------------------AGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................................................................................................................................................................................................................................................................................................................................................................ATTGAGGACTTCATATTGCTTGTGG..............................................2511.0010100000000
..........................................................................................................................ACGGCTGTATGTGTGCATGT----------------------------------------------------------------------------------------------------------------G........................................................................................................................................................................................2111.0010100000000
droPer2
TCGATGATTTTGTTTATTTAATTAATCATGTGCTACTAGGCGAAG-AGCCGGTAAGT---AAGACC------------TACATTAAAGCATGCACAC----------ATT---------CGTACGGCTGTATGTGTGCATGT----------------------------------------------------------------------------------------------------------------GCATATGTACGTGAGACTGAAATCGT----------------------------------------------------ACATTGA----------TTTTGTCCATGTGTAGACCATTGAGGACTTCATATTGCTTGTGGGTACATTAGTAGCATTCA-T-----------------------AGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................................................................................................CGGCTGTATGTGTGCATGT----------------------------------------------------------------------------------------------------------------GC.......................................................................................................................................................................................2111.001010000
droAna3
CACACA--CACAAACACACAAACACACACACACAGTCATGCACGA-GGCAGATGAAT---GCCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAGCCTATAC----------------TTGAA---------CCCCAGCTTCG-TCGAAGGACGAAGGACCTCGAATGA------------AAGGCAACTTTCA----------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...ACA--CACAAACACACAAACACACAC..........................................................................................................................................................................................................................................................................................................................................................................................................................2440.251100000
droBip1
AAAAAAAATAAAACAAA--AACCATTCACAAGCAGA-----------------------------------------------------------------------------------------------CACACGTACAC----------------------------------------------------------------------------------------------------------------ACACACACACACCAAAGCGCACCCAC--------AGAGC-----GACGCTG-AG----------G----------------ATGG----------GTTGGCTTTGT-T-------------------------------------AGTTATTATTTAATCGGTGTGTCCAATTCTTGGTGAGATCSizeHit CountTotal NormTotal
No Reads
droKik1
C----------------------------GTCCTTCTGGGCCATGCAATCTGCAAAA---TGAAGCG------------AAAA--------------TGTTTCTAGC-------------------------------------------------------------------------------------------------------------AAGCACACACACACACACACACACACACACACACACACACACACACAC----------------ACAGCAACCCGC----------------------CATAG----------------TTGAA---------ACCCCCCTCTT-T-------------------------------------AGTCAACTTTCAAC-----------------------CCCSizeHit CountTotal NormTotal
No Reads
droFic1
TCGATGACTTTGTCTATCTCATTAATCATGTGTTGCTGGGCGAGG-AGCCGGTAAGT---GGTTT-----------------------------------------------------------------------------------------------------------------G--CATGCTGCCG-ATCCC----------CGAC-------AGTC----------------------------------------------------------------------------------------------------------------ACTGA----------CTTCGTCCCTATGCAGACCATTGAGGATTTCATTCTGCTGGTGGGCACTTTGGTGGCGTTTA-T-----------------------AGCSizeHit CountTotal NormTotal
No Reads
droEle1
TCGATGACTTTGTCTATCTGATCAATCATGTGCTGCTGGGCGAGG-AGCCGGTAAGCTATAGGCT------------------------------------------ATG----------------CCGTATGC---C----------------------------------------A--TATGCCGCCG-ATCCC----------CATC-------AGAT---------------------------------------------------------------------------------------AATTTGATAA---------------TTTGA----------CCCTGTCCA---TCAGACCATCGAGGATTTCATACTGCTCGTGGGCACACTGGTGGCGTTCA-T-----------------------AGCSizeHit CountTotal NormTotal
No Reads
droRho1
TCGATGACTTTGTCTATCTGATCAATCATGTGCTGCTGGGCGAGG-AGCCGGTAAGT---CGGCT-----------------------------------------------------------------------------------------------------------------A--TATGCCGCCG-ATCCC----------CACC-------AGAC----------------------------------------------------------------------------------------------------------------ATTGAT---------TTTTGCCCTTGTCCAGACCATCGAGGACTTCATACTGCTCGTGGGCACACTGGTGGCGTTCA-T-----------------------AGCSizeHit CountTotal NormTotal
No Reads
droBia1
TCGACGACTTTGTCTATTTGATCAATCATGTACTGTTGGGAGAGG-AGCCGGTAAGT---GGGCC-----------------------------------------------------------------------------------------------------------------C--CGCGCTTCCG-ATCAA----------CAGC-------AGAC----------------------------------------------------------------------------------------------------------------ATTAAC---------TTTATACCTTGCACAGACAATCGAAGACTTCATTTTGCTGGTTGGCACACTGGTGGCGTTTA-T-----------------------AGCSizeHit CountTotal NormTotal
No Reads
droTak1
TCGATGACTTTGTCTATCTGATAAATCATGTGCTGCTGGGCGAGG-AGCCGGTAAGT---GGACT-----------------------------------------------------------------------------------------------------------------G--AGTGCCGCCG-ATCAC----------CACC-------ACGC----------------------------------------------------------------------------------------------------------------ATTGAC---------TTTCCACCTTGTACAGACCATCGAGGACTTTATATTGCTAGTGGGGACCCTGGTGGCGTTTA-T-----------------------AGCSizeHit CountTotal NormTotal
No Reads
droEug1
TTGATGACTTTGTCTATCTGATTAATCATGTGCTGCTGGGTGAGG-AGCCGGTAAGT---GAGCT-----------------------------------------------------------------------------------------------------------------T--CATACCGCCG-ATCCT----------CATCAATCACAAGAC---------------------------------------------------------------------------------------A--TTGACAC--------------------CTTGTACC-TTGTATACCTTGTGCAGACCATTGAGGACTTCATATTGCTGGTGGGCACTTTGGTGGCATTTA-T-----------------------AGCSizeHit CountTotal NormTotal
No Reads
dm3
TTGATGACTTTGTCTATCTAATCAATCATGTGCTGCTGGGCGAGG-AGCCGGTAAGT---GGACT-----------------------------------------------------------------------------------------------------------------T--CATGGGGCCA-ATACCATTTAGTACTCACA-------AGAC----------------------------------------------------------------------------------------------------------------ATGCCT---------TTTCGGCCTTCTGTAGACCATCGAGGACTTCATACTGCTGGTAGGCACCCTGGTGGCATTTA-T-----------------------AGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................................................GTAAGT---GGACT-----------------------------------------------------------------------------------------------------------------T--CATGGGGCCA-AT.....................................................................................................................................................................................................................................................2415.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................ATACTGCTGGTAGGCACCCTGGTGGC.................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................ATACTGCTGGTAGGCACCCTGGTGGCA................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................ATGTGCTGCTGGGCGAGG-AGCCGAC..................................................................................................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
...........................ATGTGCTGCTGGGCGAGG-AGCCGACC.................................................................................................................................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................ACTGCTGGTAGGCACCCTGGTGGC.................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................GAGGACTTCATACTGCTGGTAGG.............................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...............................................................CT-----------------------------------------------------------------------------------------------------------------T--CATGGGGCCA-ATACC..................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................TGCTGGTAGGCACCCTGGTGGCAT...............................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TGGTAGGCACCCTGGTGGCATT..............................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................GCTGGTAGGCACCCTGGTGGCATTTA-...........................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................ACTGCTGGTAGGCACCCTGGTGGCAT...............................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................ACTGCTGGTAGGCACCCTGGTGG..................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................GACCATCGAGGACTTCATACTGCTG..................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................GCTGGTAGGCACCCTGGTGGC.................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................TGCTGGTAGGCACCCTGGTGGCATT..............................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................ATGTGCTGCTGGGCGAGG-AGCCGA...................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TATCTAATCAATCATGTGCTGC...................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ATCATGTGCTGCTGGGCGAGG-.........................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000
.........................TCATGTGCTGCTGGGCGAGG-AGCCGAC..................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000
............................................................................................................................................................................................................................................................................................................................................................................GACCATCGAGGACTTCATACTGCTGG.................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................GAGGACTTCATACTGCTGGTAGGCACC.........................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................T--CATGGGGCCA-ATACCATTTAGT...........................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................ATCGAGGACTTCATACTGCTGGTAGG.............................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TGCTGCTGGGCGAGG-AGCCT....................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...................................................GTAAGT---GGACT-----------------------------------------------------------------------------------------------------------------T--CATGGGG...........................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................ATGTGCTGCTGGGCGAGG-AGC......................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................CGAGGACTTCATACTGCTGG.................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.......................................GCGAGG-AGCCGGTAAGT---GGACT-----------------------------------------------------------------------------------------------------------------.....................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................GTGCTGCTGGGCGAGG-AGCCG....................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................AATCATGTGCTGCTGGGCGAGG-AGCCGAA..................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TCATGTGCTGCTGGGCGAGG-AGCCCAC..................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.......................AATCATGTGCTGCTGGGC..............................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TCAATCATGTGCTGCTGGGCGAGG-A........................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................................................................................................................................................................................................................................................................................CATCGAGGACTTCATACTGCTGGTAGG.............................................2711.0010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TGCTGCTGGGCGAGG-AGCCGG...................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..........................................................................................................................................................................................................................................................................................................................................................................................TCATACTGCTGGTAGGCACCCTGGTG...................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................AATCATGTGCTGCTGGGCGAGG-AGCCG....................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
..............TATCTAATCAATCATGTGCTGCTGGGC..............................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TCAATCATGTGCTGCTGGGCGAGG-.........................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TGTGCTGCTGGGCGAGG-AG.......................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
....................................TGGGCGAGG-AGCCGGTAAGG---AC.........................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................TCATACTGCTGGTAGGCACCCTGGTGG..................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............ATCTAATCAATCATGTGCTGCTGGGC..............................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CAATCATGTGCTGCTGGGCGA............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..............................TGCTGCTGGGCGAGG-AGC......................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................AATCATGTGCTGCTGGGCGAGG-A........................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................ATGTGCTGCTGGGCGAGG-AGCC.....................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................TTCATACTGCTGGTAGGCACCCTGG.....................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................TACTGCTGGTAGGCACCCTGGTG...................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................ACTGCTGGTAGGCACCCTGGT....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................TCATACTGCTGGTAGGCACC.........................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................ATCGAGGACTTCATACTGCTG..................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................TCGAGGACTTCATACTGCTGGTAGGCAC..........................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........................TCATGTGCTGCTGGGCGAGG-AG.......................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................CCATCGAGGACTTCATACTGCTGG.................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................................................................................TGGTAGGCACCCTGGTGGCAT...............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
............................TGTGCTGCTGGGCGAGG-AGCCGAC..................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................ACTTCATACTGCTGGTAGGCA...........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TGTGCTGCTGGGCGAGG-AGCCGA...................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................TACTGCTGGTAGGCACCCTGGTGGCATT..............................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TATCTAATCAATCATGTGCTGCTGGG...............................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................GCTGGTAGGCACCCTGGTGGCATT..............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TCAATCATGTGCTGCTGGGCGA............................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................ATGTGCTGCTGGGCGAGG-AG.......................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................ATGTGCTGCTGGGCGAGG-.........................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................GGCGAGG-AGCCGGTAAGT---GGA........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................AATCATGTGCTGCTGGGCGAG...........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TCATGTGCTGCTGGGCGAGG-AGCCGA...................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TCAATCATGTGCTGCTGGGCGAGG-AGC......................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................ACTGCTGGTAGGCACCCTGGTG...................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TATCTAATCAATCATGTGCTG....................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................TCATACTGCTGGTAGGCACCCTGG.....................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................TGCTGGGCGAGG-AGCCGA...................................................................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TGCTGCTGGGCGAGG-AGCCGACC.................................................................................................................................................................................................................................................................................................................................................................................................2330.3310000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CTGCTGGGCGAGG-AGCCGACC.................................................................................................................................................................................................................................................................................................................................................................................................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.................................TGCTGGGCGAGG-AGCCGACC.................................................................................................................................................................................................................................................................................................................................................................................................20140.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TTGATGACTTTGTCTATCTAATCAATCATGTGCTGCTGGGCGAGG-AGCCGGTAAGT---GGGCT-----------------------------------------------------------------------------------------------------------------T--CATGGGGCCA-ATACCATTCAGTACTCACC-------TGGC----------------------------------------------------------------------------------------------------------------ATGCCC---------TTTCGGCCTTCTGTAGACCATCGAGGACTTCATACTGCTGGTGGGCACCCTGGTGGCATTTA-T-----------------------AGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................................................................................................................................................................................................................................................................................................CGGCCTTCTGTAGACCATCGAGGAC..............................................................2515.00500000001000013000
..............................................................................................................................................................................................................................................................................................................................................................TTCGGCCTTCTGTAGACCATCGAGGAC..............................................................2714.00400000011001010000
..................TAATCAATCATGTGCTGCTGGGCGAGG-.........................................................................................................................................................................................................................................................................................................................................................................................................2713.00300000010000002000
.................................................................................................................................................................................................................................................................................................................................................................................TCGAGGACTTCATACTGC....................................................1812.00200000002000000000
.............................................................................................................................................................................................................................................................................................................................................................................................TACTGCTGGTGGGCACCCTGGTGGCA................................2611.00100000000000010000
.........................TCATGTGCTGCTGGGCGAGG-AGCCGAC..................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
...............................................................................................................................................................................................................................................................................................................................................................TCGGCCTTCTGTAGACCATCGAGGACT.............................................................2711.00100000010000000000
...............................................................................................................................................................................................................................................................................................................................................................TCGGCCTTCTGTAGACCATCGAGGAC..............................................................2611.00100000001000000000
........................................................................................................................................................................................................................................................................................................................................................................TGTAGACCATCGAGGACTTCATACTGC....................................................2711.00100000000000001000
.................................................................................................................................................................................................................................................................................................................................................................GGCCTTCTGTAGACCATCGAGGAC..............................................................2411.00100000000000010000
..............................................................................................................................................................................................................................................................................................................................................................TTCGGCCTTCTGTAGACCATCGAGGACA.............................................................2811.00100000000000001000
................................................................................................................................................................................................................................................................................................................................................................CGGCCTTCTGTAGACCATCGAGGACA.............................................................2611.00100000000000001000
...................................................................................................................................................................................................................................................................................................................................................................................GAGGACTTCATACTGCTGGTGGGCAC..........................................2611.00100000010000000000
......................................................................................................................................................................................................................................................................................................................................................................TCTGTAGACCATCGAGGACTTCATA........................................................2511.00100000000000010000
.................................................................................................................................................................................................................................................................................................................................................................................TCGAGGACTTCATACTGCTGGTGGGCA...........................................2711.00100000000000010000
...................................................................................................................................................................................................................................................................................................................................................................................GAGGACTTCATACTGC....................................................1611.00100000001000000000
.......................................................................................................................................................................................................TCAGTACTCACC-------TGGC----------------------------------------------------------------------------------------------------------------ATGCC....................................................................................................2111.00110000000000000000
...............................................................................................................................................................................................................................................................................................................................................................TCGGCCTTCTGTAGACCATCGAGGACTT............................................................2811.00100000010000000000
.................................................................................................................................................................................................................................................................................................................................................................................TCGAGGACTTCATACTGCTGGTGGGC............................................2611.00100000010000000000
...................................................................................................................................................................................................................................................................................................................................................................................GAGGACTTCATACTGCTGGTGGGCACC.........................................2711.00100000000000010000
.......................................................................................................................................................................................................TCAGTACTCACC-------TGGC----------------------------------------------------------------------------------------------------------------ATGCCC---------TTT.......................................................................................2511.00100000000000010000
...............................................................................................................................................................................................................................................................................................................................................................TCGGCCTTCTGTAGACCATCGAGGACTTC...........................................................2911.00100000000000001000
.......................................................................................................................................................................................................TCAGTACTCACC-------TGGC----------------------------------------------------------------------------------------------------------------ATGCCC---------TTTC......................................................................................2611.00100000000000010000
...................................................................................................................................................................................................................................................................................................................................................................................GAGGACTTCATACTGCTGGTG...............................................2111.00101000000000000000
....................................................................................................................................................................................................................................................................................................................................................................CTTCTGTAGACCATCGAG.................................................................1811.00110000000000000000
...............................................................................................................................................................................................................................................................................................................................................TGCCC---------TTTCGGCCTTCTGTAGACCATCGA..................................................................2911.00100000001000000000
..............................................................................................................................................................................................................................................................................................................................................................TTCGGCCTTCTGTAGACCATCGAGGAAA.............................................................2811.00100000000000001000
..................................................................................................................................................................................................................................................................................................................................................................................CGAGGACTTCATACTGCTGGTGGGCAC..........................................2711.00100000000000001000
droSec2
TTGATGACTTTGTCTATCTAATCAATCATGTGCTGCTGGGCGAGG-AGCCGGTAAGT---GGGCT-----------------------------------------------------------------------------------------------------------------T--CATGGGGCCA-ATACCATTCAGTACTCACC-------TGGC----------------------------------------------------------------------------------------------------------------ATGCCC---------TTTCGGCCTTCTGTAGACCATCGAGGACTTCATACTGCTGGTGGGCACCCTGGTGGCATTTA-T-----------------------AGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................................................................................................................................................................................................................TGGC----------------------------------------------------------------------------------------------------------------ATGCCC---------TTTCGGCCTTCTG.............................................................................2311.0011000
..............................................................................................................................................................................................................................................................................................................................................................................................ACTGCTGGTGGGCACCCTGGT....................................2111.0010010
..................................................................................................................................................................................................................................................................................................................................................................................CGAGGACTTCATACTGCTGG.................................................2011.0010100
.................................................................................................................................................................................................................................................................................................................................................................................TCGAGGACTTCATACTGCTGG.................................................2111.0010100
droYak3
TTGATGACTTTGTCTATCTGATCAATCATGTGCTTCTGGGCGAGG-AGCCGGTAAGT---GGGCT------------------------------------------AT---------------------------------------------------------------------A--CATGCGGCCA-ATCCCATTCAGTACTCACC-------AGAC----------------------------------------------------------------------------------------------------------------ATGGAC---------TTTCGGCCTTCTGTAGACCATCGAAGACTTCATACTGCTGGTGGGCACCCTGGTGGCGTTTA-T-----------------------AGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................CAATCATGTGCTTCTGGGCGA............................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
..........................................................................................................................................................................................................................AGAC----------------------------------------------------------------------------------------------------------------ATGGAC---------TTTCGGCCTTC...............................................................................2120.50101000000000
droEre2
TTGATGACTTTGTCTATCTGATCAATCATGTGCTGCTGGGCGAGG-AGCCGGTAAGT---GGGCT-----------------------------------------------------------------------------------------------------------------A--CATGCGGCCA-ATTGCATTCAGAATTCACC-------AGAC----------------------------------------------------------------------------------------------------------------ATGGAC---------TTTCGGCCTTCTGTAGACCATCGAGGACTTCATACTGCTAGTGGGCACCCTGGTGGCGTTTA-T-----------------------AGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............................TGCTGCTGGGCGAGG-AGC......................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000

Generated: 05/16/2015 at 08:51 PM