ID:

dvi_7760

 Coordinate:

scaffold_12875:18476137-18476217 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.5 -13.4 -13.2 -13.0

Flybase annnotation

exon [dvir_GLEANR_5457:4]; CDS [Dvir\GJ19993-cds]; exon [dvir_GLEANR_5457:5]; CDS [Dvir\GJ19993-cds]; intron [Dvir\GJ19993-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------##################################################
TGCGGCCAATGCGTCCGTGCCGCCAGCCAGCAACGGCGCCAGCTACAATGGTGCAACTCTTGGCACAGGAGCAGCTGCAGCAATGGGCAGCACTGGCGCCGGCAACAATAATGGGGCCAGCAGCGGTACAGGTGGAGGCACTGCCGCCAACAACAACAACAACAGCAGCAACAACAACAGC
*****************************************************************........((..((.......((.((......))..))........))..))**************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060686
Argx9_0-2h_embryos_total
 SRR060685
9xArg_0-2h_embryos_total
 V053
head
 SRR060684
140x9_0-2h_embryos_total
 SRR060663
160_0-2h_embryos_total
 M027
male body		 SRR060662
9x160_0-2h_embryos_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060683
160_testes_total
 SRR060670
9_testes_total
 V047
embryo
 M047
female body
 M061
embryo
 SRR060667
160_females_carcasses_total
 SRR060681
Argx9_testes_total
...............................................ATGGTGCAACTCTTGGCACAGGAGCAGC.......................................................................................................... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................CGGCAACAATAATGGGGC................................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................CAGGAGCAGCTGCAGCAATGGGCA............................................................................................ 24 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................AGGAGCAGCTGCAGCAATGGGC............................................................................................. 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
................................ACGGCGCCAGCTACAATGGTGCA.............................................................................................................................. 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................AATGGGCAGCACTGGCGCCGGCAAC........................................................................... 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................GTACAGGTGGAGGCACTGC..................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................GCACAGGAGCAGCTGCAGCAATGGGC............................................................................................. 26 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
........................................................CTCTTGGCACAGGAGCAGCTGCAG..................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................CAACTCTTGGCACAGGAGCAGCTGCA...................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................CAGCTACAATGGTGCAACT........................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................AACTCTTGGCACAGGAGC............................................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................GGTACAGGTGGAGGCACTGCC.................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................GCACAGGAACAGCTGCAG..................................................................................................... 18 1 5 0.20 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.................................................................................AATGGTCAGAACTGGCGC.................................................................................. 18 2 5 0.20 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..................................CGCGCCAGCGACACTGGTGC............................................................................................................................... 20 3 10 0.10 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................CCAACAACAACAACAACAGCAGCAACT........ 27 1 13 0.08 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................CAACAACAACAGCAGCAAC......... 19 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................ACAACAACAACAACAGCAGCAACAACA..... 27 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
....................................................................................................................................................AACAACAACAACAACAGCAGCAA.......... 23 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
........................................................................................................................................................ACAACAACAACAGCAGCAACAACAACAGC 29 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...................................................................................................................................................CAACAACAACAACAACAGCAG............. 21 0 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...............................................................................................................................................................CAACAGCAGCAACAACAACAGC 22 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
...................................................................................................................................................................AGCAGCAACAACAACAGC 18 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CAACAACAACAACAACAGCAGCAACA........ 26 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0

Anti-sense strand reads

ACGCCGGTTACGCAGGCACGGCGGTCGGTCGTTGCCGCGGTCGATGTTACCACGTTGAGAACCGTGTCCTCGTCGACGTCGTTACCCGTCGTGACCGCGGCCGTTGTTATTACCCCGGTCGTCGCCATGTCCACCTCCGTGACGGCGGTTGTTGTTGTTGTTGTCGTCGTTGTTGTTGTCG
****************************************************************........((..((.......((.((......))..))........))..))***************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060687
9_0-2h_embryos_total
 SRR060655
9x160_testes_total
 SRR060666
160_males_carcasses_total
 SRR060671
9x160_males_carcasses_total
 M027
male body		 SRR060682
9x140_0-2h_embryos_total
 V053
head
 SRR060658
140_ovaries_total
 SRR060669
160x9_females_carcasses_total
 SRR060672
9x160_females_carcasses_total
 SRR060681
Argx9_testes_total
 V116
male body
...........................................................................................................................ACCATGCCCACCTCCCTGA....................................... 19 3 4 1.25 5 5 0 0 0 0 0 0 0 0 0 0 0 0
.....GGTCTCGCAGTCACGGCGGTC........................................................................................................................................................... 21 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TTGTCGCCACTTCCACCTC............................................ 19 3 20 0.80 16 0 2 0 4 3 2 2 0 0 1 1 0 1
..................................................AACGTTGCGAACCGTGTCCT............................................................................................................... 20 2 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..............GGCACGGAGGTCGGCCATT.................................................................................................................................................... 19 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................CCCGTCGTCGTCGTTACCCGGC........................................................................................... 22 3 10 0.10 1 0 0 0 0 0 0 0 1 0 0 0 0 0
...........................................................................................................................ACCATGCCCACCTCCCTG........................................ 18 3 18 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................GTTGTTGTTGTCGTCGTT.......... 18 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................TGTTGTCGTCGTTGTTGTTGT.. 21 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0
................................................................................................................................................GCGGTTGTTGTTGTTGTTGT................. 20 0 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12875:18476087-18476267 - dvi_7760 TGCGGCC-AATG------------CG-TCCGTGCCGCCAGCCAGCAACG----------------------G----------------------------------------------------------------C--GC------C---AGCT------ACAATGGT----GC---------------------------------------A--A--------------------------------------CTCTTGGCACAGGA---------------------------------------GCAGCTGCAGCAATGGG--------------------------------------------------CAG---------------CACTGG---CGCCGGCAA---------------------------------------------CAA-TAATGGGGCCAGCAGCG---------------GT-------------A---CAGGTG------GAGGCACTGCCGCCAACAACAACAACAACAGCAGCAACAACAACAGC
droMoj3 scaffold_6473:10518980-10519155 - G-CAGCA-GTAG------------------------------------------------------------CAA-----------------------CA------------------GC-----------AGCAGTAG--C------------------AACAAC---------------------AGCAGCAGCAGCAACA--------------G-----------------------------------C---AGCAACAACAGTA---------------------------------------GCAGCAGCAGCAAC---------------------------------------------------AGCAG---------------CAATAG---CAACAGTAG---------------------------------------------CAG-CAATCGAAATAGTAATA------------------GGAGA-------AACAGCAGCCAC---A------GCCACATCAACAAAGACAAGAACAGCAGCAACAGCAATAGC
droGri2 scaffold_15110:19334384-19334564 - CGTC--T-AA-----------GTCCAG----TGCCTGCAGC-----------------------AACA------------------------------CTGTTGCCACAG------CAATCGCC---------------AA---ATAC---------------------------------------------------TACAACAGCAACAGT-------------------------------------------TGCCACAA---------------------------------------------------------CGGG-----T---GGCAGTTT--------------GCAGCAGCAGCAGCAGTATCAGCAGCAGCAACAG---CTACAG--------------------------------------------------------------------------------------------------------------CAGCAACTGC---T------GTCACATCAACAACAGCAACAGCAGCAGCACTATCAACAGC
droWil2 scf2_1100000004785:2523-2696 - AGCAACA-ATTG------------CA---------------------------------------GCAACAA--------------------------CA------------------AC-----------AACAGC--------AGC---A---------ACAATGGCAGCAACAACAA------CAGCAACAACAACTGCAGCAGCAACAAT-------------------------------TGCAG------------CAA---------------------------------------------------------------------------------------------------------------C------------AA---CAGCAA---CAG---CAG---------------------------------------------CAA-CAATGGCAGCAAC----------------------------------AACAACAGCAACA---------ACAACTGCAGCAGCAACAACAACAGCAGCAACAACAACAGC
dp5 XR_group8:3709211-3709388 - G-CAGCA-ACA------------------------------------------------------------GCTAC-----------------------A---------G------C--------------AGCAACAT--C---------------------------------AGCAACAGCAG------CAGCAGCAGCA--------------G-----------------------------CACTACC---AGCAACAGCAGCAGCAGCAGCAGCAACATTGGGAGTACTATG---------------------------------------------------------------------------------------------------AG---AGG---CAG---------------------------------------------CAG-CAG---------------------------------CAGCAGCAGCAGACAGCG--G------CCGCCACTAGCTCCAACAACAACAGCAACAGCAACAACAACAACAGC
droPer2 scaffold_3:2446201-2446393 + TGCCGCG-GCGG------------CA---------------------------------------G--------------------------------------------------TGGCGGCACAG--------------C---------AGC---AGCAACAAC---------------------------------TCGCGCAGCAGC---A--A--------------------------------------CTCCCGCAACAGCA---------------------------------------GCAACAGCAG---------------------------------------------------------C------------AG---CAGCAG---A--------------CGAACATCAGCTGCA---AGTACGCCAATGATCCAACCACACCGGGCGGCAGTG---------------------GT-------------GGCGGCGGAGGG---------GGTGGTGGCAGCAACAACAACAATAACAGCAGCAACAACAAC
droAna3 scaffold_13266:3688294-3688490 - G-CTTCC-AATG------------AG-T--GTGCCGCC---------------------------------GG--------------------------CGC------AGCAGCAACAGC----------------------------------------AACAAG--------------------------------------------------------------------TCGTGAACAAA-----------CCCCAGCAACAACA---------------------------------------G------------------------------------------------------------------------------------CAACCT---CAA---CAGCAGCAACAAGAACAAGCCCTCGGTGGTGACCTGATGAGCTTCCAGCACATGTGGC-----------CTGCGGCTGG-------------------------CT--T------CAGCCAGTCTCCCCAGCAACAGCAGCAGCAGCAGCCGCAACAGCAGC
droBip1 scf7180000395898:44931-45072 + CAGC--ACATC------------CCCT----CCCCCACAGC-----------------------AA-----------------------------------------------CAGCAGC-------------------------------A---------ACAG---------TTGC------------------------------------A--A-----------------------CAATTG---CAACAG---C------------------------------------------------------AACACT-----------------------TC-----------AG---CAGCC------TGATG---------------------AG---CGG---CAA---------------------------------------------CAA-CA--------------------------------AGCC-------------GCAGCAGCA---------GCAACTGCAACAACAACAGCAACTGCAGCAACAACAACAG-
droKik1 scf7180000302619:421555-421732 - TG--GCA-GTCA--C------A-ACG-TTGTCGCCAGCAGTCATGACCAGCTCGCCAAT------GTTGCTG----TCATGCAGCCGACATAC------G---------GCAGCAGCAGC-------------------------------A------GCAG------------C------GGCAG------CATCGG----------------------------------------------------CTGCAA---C------------------------------------------------------AACACT------------------------------------------------------------------------AACAACGG---CGG---CGG---------------------------------------------CAA-C---------------------------------------------A----TTTGCA------------ATCAGCAGATCAACAACAACTACAGCCATAACAACAGCGAC
droFic1 scf7180000453882:328283-328454 + GGCGGCC-AAG------------TCC-----TCCTCCCAGT-----------------------CGCAGCAG--------------------------CA------------------GC-------------------------------AGCAGCAAACC------------C---------------------------------------A--A--------------------------------------TCGCAGTCGCAGCA---------------------------------------GCAGCAGCAGCAATCGTCGCCGAACT--------TC--CCGCCGAAGAG---CA---------------A------------------CCAGAGCAA---CAG---------------------------------------------CAG-C---------------------------------------------A----GCAGCAGCA---------CCAGCAGCAGCAACAGCAGCAATCACAGCAGCAACAGCAGC
droEle1 scf7180000491001:1867125-1867297 + TGCGGTG-AATTCAC------A-TGG-----CGCTT---TCCAGGAATTGCGAACCGATAGCATGGTGACAGCCAC-----------------------CGC------GGCGGCAACAGCAGCGGAG--------------C---------AAC---ACCGC---------------------------------CAA----------------------------------------------------CACCAG---C------------------------------------------------------A---------------------------------------------------------------AC---------ACCAGCAGCAG---CAG---CAG---------------------------------------------CAG-C----------------------------------------------------AGCAGCA---------GCAACAGCAGCAACATCAACAGCAGCAGCAACATCAACAGC
droRho1 scf7180000767806:9073-9237 + TTCTGCA-AATG-----------CCC-----TACCAACAGC-----------------------AGCAACAA--------------------------CA------------------AC-------------------------------AGCTGCAGCAA------------C---------------------------------------A--A--------------------------------------CTGATGATGCAGAG---------------------------------------ACAGCAACAACAATTGCCGCAGTTGC------------------------------A------------AC---------AG---CAGCAGAGACAG---CAG---------------------------------------------CAA-C---------------------------------------------A----GGTGCAGCG---------ACAAATACAACTGCAACAGCAGCAGCAGCAACAACAACAAC
droBia1 scf7180000302402:3169080-3169262 - TGATGCC-GTTG------------CA---------------------------------------GCTGCTG----CTGCGCAGCCAGCAA-CAGCAATA------------------CG-----------AGCAGCAG--CAA---C---AGC---------------------------------AGCAGCAGCAACACTA--------------G-----------------------------------C---AGCAGCAACAGCA---------------------------------------GCAGCAGCAACAAC---------------------------------------------------ACCAG---------------CAACAG---CGA---CAG---------------------------------------------CAA-C---------------------------------------------A----GCGACAGCAA--CAG-CAGCTACGCCAGCAGCAACAGCAGCAGCAACAGCAGCAGCAGC
droTak1 scf7180000412818:108153-108322 + CGTGGCC-ACCG------------CA---------------------------------------G--------------------------------------------------CAGTCGCCCAACAGCAG---C--------AGCAGCA------GCAG------------C---------------------------------------A--G--------------------------------------GCCGTCGTACAGCA---------------------------------------GCAACAGCAACAGGTTG--CTG-------------CCGCCGCCCAGCAG---C---A------------AC---------ACCAGCAGCAG---CAG---CAA---------------------------------------------CAG-C---------------------------------------------A----GGCGGTGCA---------ACAGCAACAGCAGCAACACCAACAGCAGCAGCAGCAACAGC
droEug1 scf7180000409615:364495-364664 + A-CGGCG-GTT------------------------------------------------------------GCCAC-----------------------A---------A------C--------------GGTAACAA--CGGCAGC---GGC---------GG---------------------------CGGCAACATTT--------------G-----------------------------------C---AATCAGCAGATC---------------------------------------------------------------------------------------AA---CAACTACAGCAATAACAACGGCAGCGGTAG---CAGCAA---CAG---CAG---------------------------------------------CAG-CAATC---------------------------AT-------------A---TGAGTG------CAGGCAGTTTCTTCGGCGGCAACAGCAACAACAGTAATAGCAACAAC
dm3 chr3L:8430868-8431035 - TGCAGCC-GCAG--GGTCAGGGCCCGT-CG-CCCCAGCAGC-----------------------AGCA---G--------------------------------------------CATC-----AAC---AGCAACAA--CAACAGC---AGC---------------------------AGCAG------CAACAT------CAGCAGAATA-------------------------------TGCACC---------------------------------------------------------------------------------------------------------------------------ACC------------AT---CAACAT---CAG---CAG---------------------------------------------CAA-C---------------------------------------------A----CATGCAGCAGCA------GCAGCAACAACAACAACATCAGCAGCAACACCAACAGCAGC
droSim2 2r:12215398-12215582 - CGCCCTC-AAT------------CCT-----TTCTCTCTGC-----------------------CGCC---GC-----------------------------------CA--------GG-----------ATCTGC--GG---CTGCTGCA------GCAG------------C------------------TTCCACACCC------GC---CCTGCTGGCCCAACAACAGGCTCAGTTCATA-----------GCCCAGCAAAGT---------------------------------------------------------TT---------------------------------------------------G---------------TTGGT------G---CGA---------------------------------------------CAG-CA--------------------------------GGCTGC-------AGCTGCTGCCTT---G------GCCGC-TGAACAGCAGCAACAACAGCAGCAGCAGCAACAAC
droSec2 scaffold_2:2891404-2891585 - AGCAGCA-ACAT------------C----------AGCAGC-----------------------AGCAGCAG---------------------------------------------------------------------CAA---C---AGCAGCAGCAG------------C---------------------AGC----------------------------------------------------------AGCA------------------------CTGGGACTACTATGCCAGGCAGCAGCAGCAACATCAACAGCAGCAGCAGC---------------------------------------AAC------------AG---CAACAG---C--------------------------------------------------------------------------CAGCGGCCGCCACCGGC-------------AACACCAACGGCA---------ACAGCAGCAACAACGGCAACAACAGCAACGCCGACGGCAGC
droYak3 3R:25034568-25034734 - TGCAGCA-TTCA--A------G-TCG-----CGCCTGCAAC-----------------------AGCAACAGCTA------------------------------------------------------------------------C---TGCAGCAGCAC------------CAGC-------------------------------------------------------------------------------AACAGATACAGCA---------------------------------------GCAGCAGCAGCACGAGCAGCAGCAGC---------------------------------------------------AACAG---CAACAGGAGCAT---CAG---------------------------------------------CAA-C-------------------------------------------------AGGAGCTGCA---------GCAACAGCAACAACAGCAACAGCAGCAGCAATCTCAGCAGC
droEre2 scaffold_4690:5954368-5954546 + G-CT----AATG-----------CT----------------------------------------------GCAG-------CAACAGCAG-CAGCAACA------------------GC-------------------------------AGCAGCA---ACAACAGCAGCTGCAGCAG------CAGCAACAACAGCAGCTACAGCAGCAGC-------------------------------AACAA------------CAG---------------------------------------------------------------------------------------------------------------CAG---------------CTGCAG---CAG---CAG---------------------------------------------CAA-CAACAGCAGCTGC----------------------------------AGCAGCAACAAC---T------GCAGCAGCAACTGCAACAACAGCAGCTGCAACTGCAACAGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TGCGGCC-AATG------------CG-TCCGTGCCGCCAGCCAGCAACG----------------------G----------------------------------------------------------------C--GC------C---AGCT------ACAATGGT----GC---------------------------------------A--A--------------------------------------CTCTTGGCACAGGA---------------------------------------GCAGCTGCAGCAATGGG--------------------------------------------------CAG---------------CACTGG---CGCCGGCAA---------------------------------------------CAA-TAATGGGGCCAGCAGCG---------------GT-------------A---CAGGTG------GAGGCACTGCCGCCAACAACAACAACAACAGCAGCAACAACAACAGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....................................................................................................................................................................ATGGT----GC---------------------------------------A--A--------------------------------------CTCTTGGCACAGGA---------------------------------------GCAGC.................................................................................................................................................................................................................................................................2811.001000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................CGGCAA---------------------------------------------CAA-TAATGGGGC.....................................................................................................1811.001000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................................................................................................................................................................................CAGGA---------------------------------------GCAGCTGCAGCAATGGG--------------------------------------------------CA.................................................................................................................................................................................................2411.001000000000000000000000000000000001000000000000000000000000000000
..........................................................................................................................................................................................................................................................................AGGA---------------------------------------GCAGCTGCAGCAATGGG--------------------------------------------------C..................................................................................................................................................................................................2211.001000000000000100000000000000000000000000000000000000000000000000
..............................................ACG----------------------G----------------------------------------------------------------C--GC------C---AGCT------ACAATGGT----GC---------------------------------------A--..................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000100
................................................................................................................................................................................................................................................................................................................................AATGGG--------------------------------------------------CAG---------------CACTGG---CGCCGGCAA---------------------------------------------C.................................................................................................................2511.001100000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT-------------A---CAGGTG------GAGGCACTGC.....................................1911.001000000000000000000000000000000000001000000000000000000000000000
......................................................................................................................................................................................................................................................................GCACAGGA---------------------------------------GCAGCTGCAGCAATGGG--------------------------------------------------C..................................................................................................................................................................................................2611.001000000000000000000000000000000000100000000000000000000000000000
................................................................................................................................................................................................................................................................CTCTTGGCACAGGA---------------------------------------GCAGCTGCAG............................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000001000000000000000000000000000
..............................................................................................................................................................................C---------------------------------------A--A--------------------------------------CTCTTGGCACAGGA---------------------------------------GCAGCTGCA.............................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000100000000000000000000000000
...................................................................................................................................................C---AGCT------ACAATGGT----GC---------------------------------------A--A--------------------------------------CT.........................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................................................................................A--A--------------------------------------CTCTTGGCACAGGA---------------------------------------GC....................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---------------GT-------------A---CAGGTG------GAGGCACTGCC....................................2111.001000000000000010000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAACAACAACAACAACAGCAGCAACT........27130.081000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAGCAGCAAC.........19200.051000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACAACAACAGCAGCAACAACA.....27200.051001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAACAACAGCAGCAA..........23200.051000000000000000000000000000000010000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACAACAGCAGCAACAACAACAGC29200.051001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAACAACAGCAG.............21200.051000000000000000000001000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCAACAACAACAGC22200.051000000000000000001000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAACAACAGC18200.051000000000000010000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAACAACAGCAGCAACA........26200.051000100000000000000000000000000000000000000000000000000000000000
droMoj3
G-CAGCA-GTAG------------------------------------------------------------CAA-----------------------CA------------------GC-----------AGCAGTAG--C------------------AACAAC---------------------AGCAGCAGCAGCAACA--------------G-----------------------------------C---AGCAACAACAGTA---------------------------------------GCAGCAGCAGCAAC---------------------------------------------------AGCAG---------------CAATAG---CAACAGTAG---------------------------------------------CAG-CAATCGAAATAGTAATA------------------GGAGA-------AACAGCAGCCAC---A------GCCACATCAACAAAGACAAGAACAGCAGCAACAGCAATAGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................................................................................................................................................................................................................................................AACAACAGTA---------------------------------------GCAGCAGCA.............................................................................................................................................................................................................................................................19200.051000001
droGri2
CGTC--T-AA-----------GTCCAG----TGCCTGCAGC-----------------------AACA------------------------------CTGTTGCCACAG------CAATCGCC---------------AA---ATAC---------------------------------------------------TACAACAGCAACAGT-------------------------------------------TGCCACAA---------------------------------------------------------CGGG-----T---GGCAGTTT--------------GCAGCAGCAGCAGCAGTATCAGCAGCAGCAACAG---CTACAG--------------------------------------------------------------------------------------------------------------CAGCAACTGC---T------GTCACATCAACAACAGCAACAGCAGCAGCACTATCAACAGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...................................................................................................................................................................................................................................................................................................................................................GTTT--------------GCAGCAGCAGCAGC........................................................................................................................................................................................................1860.17110
...........................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAACAG---CTACAG--------------------------------------------------------------------------------------------------------------CAGC.........................................................2270.14110
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGCAACAGCAGC...............19200.05110
droWil2
AGCAACA-ATTG------------CA---------------------------------------GCAACAA--------------------------CA------------------AC-----------AACAGC--------AGC---A---------ACAATGGCAGCAACAACAA------CAGCAACAACAACTGCAGCAGCAACAAT-------------------------------TGCAG------------CAA---------------------------------------------------------------------------------------------------------------C------------AA---CAGCAA---CAG---CAG---------------------------------------------CAA-CAATGGCAGCAAC----------------------------------AACAACAGCAACA---------ACAACTGCAGCAGCAACAACAACAGCAGCAACAACAACAGCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................................................................................................................................................A---------ACAATGGCAGCAACAACAA------CAG..............................................................................................................................................................................................................................................................................................................................................................................................23200.7014014000
.......................................................................................................................................................................................................................................................................AA---------------------------------------------------------------------------------------------------------------C------------AA---CAGCAA---CAG---CAG---------------------------------------------CAA-CAATGG........................................................................................................26200.35707000
..................................................................CAACAA--------------------------CA------------------AC-----------AACAGC--------AGC---A---------..........................................................................................................................................................................................................................................................................................................................................................................................................................20200.20400040
......A-ATTG------------CA---------------------------------------GCAACAA--------------------------CA------------------AC-----------AACAGC--------..........................................................................................................................................................................................................................................................................................................................................................................................................................................24100.20202000
................................................................................................................................................................................................................AACAAT-------------------------------TGCAG------------CAA---------------------------------------------------------------------------------------------------------------C------------AA---CAGCA............................................................................................................................................................................22200.15301020
........................................................................................................................................................................................................................................................AG------------CAA---------------------------------------------------------------------------------------------------------------C------------AA---CAGCAA---CAG---CAG---------------------------------------------CAA-..............................................................................................................23200.15303000
................................................................................................................................................................................................................AACAAT-------------------------------TGCAG------------CAA---------------------------------------------------------------------------------------------------------------C------------AA---CAG..............................................................................................................................................................................20200.15303000
.......................................................................................................................................................A---------ACAATGGCAGCAACAACAA------CAGC.............................................................................................................................................................................................................................................................................................................................................................................................24200.10202000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAC----------------------------------AACAACAGCAACA---------ACAACTG..................................26200.10202000
...AACA-ATTG------------CA---------------------------------------GCAACAA--------------------------CA------------------AC-----------AACAGC--------..........................................................................................................................................................................................................................................................................................................................................................................................................................................27100.10101000
......A-ATTG------------CA---------------------------------------GCAACAA--------------------------CA------------------AC-----------AACAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................23100.10101000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACAACAGCAGCAACA........21200.10200020
........................................................................................................................................................................................................................................................AG------------CAA---------------------------------------------------------------------------------------------------------------C------------AA---CAGCAA---CAG---CAG---------------------------------------------..................................................................................................................20200.10202000
.....................................................................................................................................................................................................................................................TGCAG------------CAA---------------------------------------------------------------------------------------------------------------C------------AA---CAGCAA---CAG---CAG---------------------------------------------..................................................................................................................23200.10202000
................................................................................................................................................................................................CAACAACTGCAGCAGCAACAAT-------------------------------TGC...................................................................................................................................................................................................................................................................................................................................25200.10202000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA-CAATGGCAGCAAC----------------------------------AACAACAG.......................................................24200.10201010
......A-ATTG------------CA---------------------------------------GCAACAA--------------------------CA------------------AC-----------A.......................................................................................................................................................................................................................................................................................................................................................................................................................................................19130.08100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCAGCAACAACAACAGCAGCAACA........28140.07100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------ACAACTGCAGCAGCAACAACAACA.................25150.07101000
...........................................................................................................................................................................................................................................................................................................................................................................................................AGCAA---CAG---CAG---------------------------------------------CAA-CAATGGCAG.....................................................................................................23200.05101000
...................................................................................................................................................C---A---------ACAATGGCAGCAACAACAA------CAG..............................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCAGCAAC----------------------------------AACAACAGCAACA---------A........................................24200.05100010
...................................................................................................................................................C---A---------ACAATGGCAGCAACAACAA------CAGC.............................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCAGCAAC----------------------------------AACAACAGCAACA---------ACAA.....................................27200.05100010
.....................................................................................................................................CAGC--------AGC---A---------ACAATGGCAGCAA.............................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACA---------ACAACTGCAGCAGCAAC........................27200.05101000
...................................................................................................................................................................AATGGCAGCAACAACAA------CAGCAACA.........................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
........................CA---------------------------------------GCAACAA--------------------------CA------------------AC-----------AACAGC--------AGC---A---------AC........................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCAGCAAC----------------------------------AACAACAGCAACA---------ACAAC....................................28200.05101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................AG---------------------------------------------CAA-CAATGGCAGCAAC----------------------------------AACAACA........................................................25200.05100010
............................................................................................................................................................................AACAACAA------CAGCAACAACAACTGCAGC..............................................................................................................................................................................................................................................................................................................................................................................27200.05101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC----------------------------------AACAACAGCAACA---------ACAACTGC.................................24200.05101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC----------------------------------AACAACAGCAACA---------ACAACTGCAGC..............................27200.05101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA-CAATGGCAGCAAC----------------------------------AACAACAGC......................................................25200.05101000
.........................................................................................................................................................................AGCAACAACAA------CAGCAACAACAACTGCAG...............................................................................................................................................................................................................................................................................................................................................................................29200.05101000
......................................................................................................................................AGC--------AGC---A---------ACAATGGCAGCAACAACA........................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
.....................................................................................................................................................................TGGCAGCAACAACAA------CAGCAACAA........................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
...................................................................................................................................................................AATGGCAGCAACAACAA------CAGC.............................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
...................................................................................................................................................................AATGGCAGCAACAACAA------CAGCAACAAC.......................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
........................................................................................................................................................................................................................................................................................................................................................................................C------------AA---CAGCAA---CAG---CAG---------------------------------------------CAA-CAATGG........................................................................................................24200.05100010
.....................................................................................................................................................................TGGCAGCAACAACAA------CAGCAACAACAA.....................................................................................................................................................................................................................................................................................................................................................................................27200.05100010
..............................................................................................................................................................................CAACAA------CAGCAACAACAACTGCAGC..............................................................................................................................................................................................................................................................................................................................................................................25200.05101000
...............................................................................................................................................................................AACAA------CAGCAACAACAACTGCAGCA.............................................................................................................................................................................................................................................................................................................................................................................25200.05100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACA---------ACAACTGCAGCAGCAA.........................23200.05101000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGCAGCAAC----------------------------------AACAACAGCAACA---------AC.......................................27200.05101000
............................................................................................................................................................................AACAACAA------CAGCAACAACAACT...................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
.....................................................................................................................................................................................................................................................TGCAG------------CAA---------------------------------------------------------------------------------------------------------------C------------AA---CAGCAA---CAG---CA................................................................................................................................................................22200.05101000
..................................................................................................................................................................................AA------CAGCAACAACAACTGCAGCAGC...........................................................................................................................................................................................................................................................................................................................................................................24200.05101000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-CAATGGCAGCAAC----------------------------------AACAACAGCA.....................................................24200.05101000
............................................................................................................................................................................AACAACAA------CAGCAACAACAACTGC.................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA---------ACAACTGCAGCAGCAACA.......................22200.05101000
................................................................................................................................................................................................................AACAAT-------------------------------TGCAG------------CAA---------------------------------------------------------------------------------------------------------------C------------AA---CAGCAA---C.......................................................................................................................................................................24200.05101000
.................................................................................................................................................AGC---A---------ACAATGGCAGCAACAACAA------CA...............................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAC----------------------------------AACAACAGCAACA---------ACAACTGCAG...............................29200.05101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-CAATGGCAGCAAC----------------------------------AACAACAGCA.....................................................25200.05100010
.................................................................................................................................................................................................AACAACTGCAGCAGCAACAAT-------------------------------TG....................................................................................................................................................................................................................................................................................................................................23200.05101000
.....................................................................................................................................................................TGGCAGCAACAACAA------CAGCAACAACAAC....................................................................................................................................................................................................................................................................................................................................................................................28200.05101000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGCAGCAAC----------------------------------AACAACAGCAACA---------.........................................25200.05101000
.................................................................................................................................................................................................AACAACTGCAGCAGCAACAAT-------------------------------T.....................................................................................................................................................................................................................................................................................................................................22200.05101000
.....................................................................................................................................................................................................................T-------------------------------TGCAG------------CAA---------------------------------------------------------------------------------------------------------------C------------AA---CAGCAA---CAG---CAG---------------------------------------------C.................................................................................................................25200.05101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-CAATGGCAGCAAC----------------------------------AACAACAGC......................................................24200.05100010
...............................................................................................................................................................................AACAA------CAGCAACAACAACTGCAG...............................................................................................................................................................................................................................................................................................................................................................................23200.05101000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-CAATGGCAGCAAC----------------------------------AACAACAG.......................................................22200.05101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGCAACA---------ACAACTGCAGCA.............................25200.05100010
........................................................................................................................................................................................................................................................................A---------------------------------------------------------------------------------------------------------------C------------AA---CAGCAA---CAG---CAG---------------------------------------------CAA-CAATGG........................................................................................................25200.05101000
.......................................................................................................................................................A---------ACAATGGCAGCAACAACAA------CAGCA............................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
......................................................................................................................................................................GGCAGCAACAACAA------CAGCAAC..........................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
................................................................................................................................................................................................................AACAAT-------------------------------TGCAG------------CAA---------------------------------------------------------------------------------------------------------------C------------AA---CAGCAA---........................................................................................................................................................................23200.05101000
..............................................................................................................................................................................................AACAACAACTGCAGCAGCAAC........................................................................................................................................................................................................................................................................................................................................................................21200.05101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C----------------------------------AACAACAGCAACA---------ACAACTGCAGC..............................25200.05101000
...................................................................................................................................................................AATGGCAGCAACAACAA------CAGCA............................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
...................................................................................................................................................................................................................AAT-------------------------------TGCAG------------CAA---------------------------------------------------------------------------------------------------------------C------------AA---CAGCAA---CAG---C.................................................................................................................................................................24200.05101000
.......................................................................................................................................................................................................................................................................AA---------------------------------------------------------------------------------------------------------------C------------AA---CAGCAA---CAG---CAG---------------------------------------------CAA-CAATGGC.......................................................................................................27200.05101000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGCAGCAAC----------------------------------AACAACAGC......................................................21200.05101000
................................................................................................................................................................................................CAACAACTGCAGCAGCAACAAT-------------------------------TGCAG------------C....................................................................................................................................................................................................................................................................................................................28200.05101000
...................................................................................................................................................................................................................................................................................................................................................................................................................CAG---CAG---------------------------------------------CAA-CAATGGCAGCAA..................................................................................................21200.05100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAGCAAC----------------------------------AACAACAGCAACA---------A........................................23200.05101000
dp5
G-CAGCA-ACA------------------------------------------------------------GCTAC-----------------------A---------G------C--------------AGCAACAT--C---------------------------------AGCAACAGCAG------CAGCAGCAGCA--------------G-----------------------------CACTACC---AGCAACAGCAGCAGCAGCAGCAGCAACATTGGGAGTACTATG---------------------------------------------------------------------------------------------------AG---AGG---CAG---------------------------------------------CAG-CAG---------------------------------CAGCAGCAGCAGACAGCG--G------CCGCCACTAGCTCCAACAACAACAGCAACAGCAACAACAACAACAGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................................................................................................................................................................................................................................................................................ACATTGGGAGTACTATG---------------------------------------------------------------------------------------------------AG---AGG---C.................................................................................................................................................................2311.0010010000000
.......................................................................................................................................................................................................................................................CACTACC---AGCAACAGCAGCAGC...........................................................................................................................................................................................................................................................................................................2211.0010010000000
....................................................................................................................C--------------AGCAACAT--C---------------------------------AGCAACAGCAG------CA.........................................................................................................................................................................................................................................................................................................................................................................................2360.1710100000000
.....................................................................................................................................CAACAT--C---------------------------------AGCAACAGCAG------CAGC.......................................................................................................................................................................................................................................................................................................................................................................................2280.1310100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAG---------------------------------CAGCAGCAGCAGACAG..........................................................19120.0810100000000
......................................................................................................................................................................................................................................................................CAGCAGCAGCAGCAGCAGCAA................................................................................................................................................................................................................................................................................................21200.0510000001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................G---------------------------------------------CAG-CAG---------------------------------CAGCAGCAGCAGAC............................................................21200.0510100000000
............................................................................................................................................................................................................................................................CC---AGCAACAGCAGCAGCAGCAGC.....................................................................................................................................................................................................................................................................................................23200.0510100000000
..........................................................................................................................................T--C---------------------------------AGCAACAGCAG------CAGCAGCAGC.................................................................................................................................................................................................................................................................................................................................................................................23200.0510000100000
........................................................................................................................................CAT--C---------------------------------AGCAACAGCAG------CAGC.......................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000000
droPer2
TGCCGCG-GCGG------------CA---------------------------------------G--------------------------------------------------TGGCGGCACAG--------------C---------AGC---AGCAACAAC---------------------------------TCGCGCAGCAGC---A--A--------------------------------------CTCCCGCAACAGCA---------------------------------------GCAACAGCAG---------------------------------------------------------C------------AG---CAGCAG---A--------------CGAACATCAGCTGCA---AGTACGCCAATGATCCAACCACACCGGGCGGCAGTG---------------------GT-------------GGCGGCGGAGGG---------GGTGGTGGCAGCAACAACAACAATAACAGCAGCAACAACAACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................................................................................................................................................................................................................................CAACAGCA---------------------------------------GCAACAGCAG---------------------------------------------------------C------------AG---C................................................................................................................................................................................22200.051010000
......................................................................................................................................................................................................................................................................CAACAGCA---------------------------------------GCAACAGCAG---------------------------------------------------------C------------AG---CA...............................................................................................................................................................................23200.051010000
droAna3
G-CTTCC-AATG------------AG-T--GTGCCGCC---------------------------------GG--------------------------CGC------AGCAGCAACAGC----------------------------------------AACAAG--------------------------------------------------------------------TCGTGAACAAA-----------CCCCAGCAACAACA---------------------------------------G------------------------------------------------------------------------------------CAACCT---CAA---CAGCAGCAACAAGAACAAGCCCTCGGTGGTGACCTGATGAGCTTCCAGCACATGTGGC-----------CTGCGGCTGG-------------------------CT--T------CAGCCAGTCTCCCCAGCAACAGCAGCAGCAGCAGCCGCAACAGCAGCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................................................................................................................................................................................................................................................................................................................................................................................................AA---CAGCAGCAACAAGAACAAGCCCTCGGT.......................................................................................................................................2911.001010000
..CTTCC-AATG------------AG-T--GTGCCGCC---------------------------------GG--------------------------CGC------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAGAACAAGCCCTCGGTGGC....................................................................................................................................2311.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACATGTGGC-----------CTGCGGCTGG-------------------------CT--T------CA.............................................2711.001100000
..............................GTGCCGCC---------------------------------GG--------------------------CGC------AGCAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
......C-AATG------------AG-T--GTGCCGCC---------------------------------GG--------------------------CGC------AG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
....................................................................................................GC------AGCAGCAACAGC----------------------------------------AACAAG--------------------------------------------------------------------TCGT.............................................................................................................................................................................................................................................................................................................................................2411.001000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAGCCGCAACAGCAGT2680.131001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGCAGCAGCAGCAGCC...........23150.071010000
droBip1
CAGC--ACATC------------CCCT----CCCCCACAGC-----------------------AA-----------------------------------------------CAGCAGC-------------------------------A---------ACAG---------TTGC------------------------------------A--A-----------------------CAATTG---CAACAG---C------------------------------------------------------AACACT-----------------------TC-----------AG---CAGCC------TGATG---------------------AG---CGG---CAA---------------------------------------------CAA-CA--------------------------------AGCC-------------GCAGCAGCA---------GCAACTGCAACAACAACAGCAACTGCAGCAACAACAACAG-SizeHit CountTotal NormTotal
No Reads
droKik1
TG--GCA-GTCA--C------A-ACG-TTGTCGCCAGCAGTCATGACCAGCTCGCCAAT------GTTGCTG----TCATGCAGCCGACATAC------G---------GCAGCAGCAGC-------------------------------A------GCAG------------C------GGCAG------CATCGG----------------------------------------------------CTGCAA---C------------------------------------------------------AACACT------------------------------------------------------------------------AACAACGG---CGG---CGG---------------------------------------------CAA-C---------------------------------------------A----TTTGCA------------ATCAGCAGATCAACAACAACTACAGCCATAACAACAGCGACSizeHit CountTotal NormTotal
No Reads
droFic1
GGCGGCC-AAG------------TCC-----TCCTCCCAGT-----------------------CGCAGCAG--------------------------CA------------------GC-------------------------------AGCAGCAAACC------------C---------------------------------------A--A--------------------------------------TCGCAGTCGCAGCA---------------------------------------GCAGCAGCAGCAATCGTCGCCGAACT--------TC--CCGCCGAAGAG---CA---------------A------------------CCAGAGCAA---CAG---------------------------------------------CAG-C---------------------------------------------A----GCAGCAGCA---------CCAGCAGCAGCAACAGCAGCAATCACAGCAGCAACAGCAGCSizeHit CountTotal NormTotal
No Reads
droEle1
TGCGGTG-AATTCAC------A-TGG-----CGCTT---TCCAGGAATTGCGAACCGATAGCATGGTGACAGCCAC-----------------------CGC------GGCGGCAACAGCAGCGGAG--------------C---------AAC---ACCGC---------------------------------CAA----------------------------------------------------CACCAG---C------------------------------------------------------A---------------------------------------------------------------AC---------ACCAGCAGCAG---CAG---CAG---------------------------------------------CAG-C----------------------------------------------------AGCAGCA---------GCAACAGCAGCAACATCAACAGCAGCAGCAACATCAACAGCSizeHit CountTotal NormTotal
No Reads
droRho1
TTCTGCA-AATG-----------CCC-----TACCAACAGC-----------------------AGCAACAA--------------------------CA------------------AC-------------------------------AGCTGCAGCAA------------C---------------------------------------A--A--------------------------------------CTGATGATGCAGAG---------------------------------------ACAGCAACAACAATTGCCGCAGTTGC------------------------------A------------AC---------AG---CAGCAGAGACAG---CAG---------------------------------------------CAA-C---------------------------------------------A----GGTGCAGCG---------ACAAATACAACTGCAACAGCAGCAGCAGCAACAACAACAACSizeHit CountTotal NormTotal
No Reads
droBia1
TGATGCC-GTTG------------CA---------------------------------------GCTGCTG----CTGCGCAGCCAGCAA-CAGCAATA------------------CG-----------AGCAGCAG--CAA---C---AGC---------------------------------AGCAGCAGCAACACTA--------------G-----------------------------------C---AGCAGCAACAGCA---------------------------------------GCAGCAGCAACAAC---------------------------------------------------ACCAG---------------CAACAG---CGA---CAG---------------------------------------------CAA-C---------------------------------------------A----GCGACAGCAA--CAG-CAGCTACGCCAGCAGCAACAGCAGCAGCAACAGCAGCAGCAGCSizeHit CountTotal NormTotal
No Reads
droTak1
CGTGGCC-ACCG------------CA---------------------------------------G--------------------------------------------------CAGTCGCCCAACAGCAG---C--------AGCAGCA------GCAG------------C---------------------------------------A--G--------------------------------------GCCGTCGTACAGCA---------------------------------------GCAACAGCAACAGGTTG--CTG-------------CCGCCGCCCAGCAG---C---A------------AC---------ACCAGCAGCAG---CAG---CAA---------------------------------------------CAG-C---------------------------------------------A----GGCGGTGCA---------ACAGCAACAGCAGCAACACCAACAGCAGCAGCAGCAACAGCSizeHit CountTotal NormTotal
No Reads
droEug1
A-CGGCG-GTT------------------------------------------------------------GCCAC-----------------------A---------A------C--------------GGTAACAA--CGGCAGC---GGC---------GG---------------------------CGGCAACATTT--------------G-----------------------------------C---AATCAGCAGATC---------------------------------------------------------------------------------------AA---CAACTACAGCAATAACAACGGCAGCGGTAG---CAGCAA---CAG---CAG---------------------------------------------CAG-CAATC---------------------------AT-------------A---TGAGTG------CAGGCAGTTTCTTCGGCGGCAACAGCAACAACAGTAATAGCAACAACSizeHit CountTotal NormTotal
No Reads
dm3
TGCAGCC-GCAG--GGTCAGGGCCCGT-CG-CCCCAGCAGC-----------------------AGCA---G--------------------------------------------CATC-----AAC---AGCAACAA--CAACAGC---AGC---------------------------AGCAG------CAACAT------CAGCAGAATA-------------------------------TGCACC---------------------------------------------------------------------------------------------------------------------------ACC------------AT---CAACAT---CAG---CAG---------------------------------------------CAA-C---------------------------------------------A----CATGCAGCAGCA------GCAGCAACAACAACAACATCAGCAGCAACACCAACAGCAGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
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......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACACCAACAGCAG.20160.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACAACAACATCA....................18160.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------GCAGCAACAACAACAACAT......................21180.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAACATCAGC..................18180.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAACAACATCAGT..................21190.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..............................................................................................................................AC---AGCAACAA--CAACAGC---A...................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................ACAGC---AGC---------------------------AGCAG------CAACA......................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCA------GCAGCAACAACAACAAC........................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................CAACAGC---AGC---------------------------AGCAG------CAACA......................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................AAC---AGCAACAA--CAACAGC---AGC---------------------------......................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................AGCAACAA--CAACAGC---AGC---------------------------AGC...................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..................................................................................................................................................GC---AGC---------------------------AGCAG------CAACAT------CAGCA..........................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAACACCAACAGC...19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCA------GCAGCAACAACAACA..........................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................CAA--CAACAGC---AGC---------------------------AGCAG------CAACA......................................................................................................................................................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................C---AGCAACAA--CAACAGC---AGC---------------------------AGCAG------T..........................................................................................................................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................ACAA--CAACAGC---AGC---------------------------AGCAG------CAA........................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................CAACAA--CAACAGC---AGC---------------------------AGCAG------C..........................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA------GCAGCAACAACAACAACA.......................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................C---AGCAACAA--CAACAGC---AGC---------------------------AGCAG------CA.........................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCA------GCAGCAACAACA.............................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................CAGC---AGC---------------------------AGCAG------CAACAT------CAGCA..........................................................................................................................................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................AGC---AGC---------------------------AGCAG------CAACAT------CAGCA..........................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCA------GCAGCAACAACAAC...........................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................CAACAA--CAACAGC---AGC---------------------------AGCA..................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.......................................................................................................................................ACAA--CAACAGC---AGC---------------------------AGCAG------CAAC.......................................................................................................................................................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAACAACATCAGCAA................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.....................................................................................................................................CAACAA--CAACAGC---AGC---------------------------AGCAG------...........................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------GCAGCAACAACAACAACA.......................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................C-----AAC---AGCAACAA--CAACAGC---AG..................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...................................................................................................................................AGCAACAA--CAACAGC---AGC---------------------------AGCAG------CA.........................................................................................................................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CGCCCTC-AAT------------CCT-----TTCTCTCTGC-----------------------CGCC---GC-----------------------------------CA--------GG-----------ATCTGC--GG---CTGCTGCA------GCAG------------C------------------TTCCACACCC------GC---CCTGCTGGCCCAACAACAGGCTCAGTTCATA-----------GCCCAGCAAAGT---------------------------------------------------------TT---------------------------------------------------G---------------TTGGT------G---CGA---------------------------------------------CAG-CA--------------------------------GGCTGC-------AGCTGCTGCCTT---G------GCCGC-TGAACAGCAGCAACAACAGCAGCAGCAGCAACAACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACAGCAGCAACAACAGCAGC............2311.00110000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................G---CGA---------------------------------------------CAG-CA--------------------------------GGCTGC-------AGCTGCT........................................................2211.00100010000000000000
...........................................................................................................................................................................................................................................................................T---------------------------------------------------------TT---------------------------------------------------G---------------TTGGT------G---CGA---------------------------------------------CAG-CA--------------------------------GGCTG.......................................................................2311.00110000000000000000
droSec2
AGCAGCA-ACAT------------C----------AGCAGC-----------------------AGCAGCAG---------------------------------------------------------------------CAA---C---AGCAGCAGCAG------------C---------------------AGC----------------------------------------------------------AGCA------------------------CTGGGACTACTATGCCAGGCAGCAGCAGCAACATCAACAGCAGCAGCAGC---------------------------------------AAC------------AG---CAACAG---C--------------------------------------------------------------------------CAGCGGCCGCCACCGGC-------------AACACCAACGGCA---------ACAGCAGCAACAACGGCAACAACAGCAACGCCGACGGCAGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................................................................................................................................................................AG------------C---------------------AGC----------------------------------------------------------AGCA------------------------CTGGGACT......................................................................................................................................................................................................................................................................................1811.0010010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACACCAACGGCA---------ACAGCAGCA................................2211.0010010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCAACAACAGCAACGCC.........1911.0010010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGGCA---------ACAGCAGCAACA.............................2070.1410010
............................................................................................................................................................................................................................................................................................................................CATCAACAGCAGCAGCAGC---------------------------------------AAC------------A.....................................................................................................................................................................................2380.1310010
.......................................................................................................................................................................................................................................................................................................................AGCAACATCAACAGCAGCAGCAGC---------------------------------------A....................................................................................................................................................................................................2580.1310010
..........................................................................................................................................................................................................................................................................................................................AACATCAACAGCAGCAGCAGC---------------------------------------.....................................................................................................................................................................................................21110.0910010
.......................................................................................................................................................................................................................................................................................................................AGCAACATCAACAGCAGCAG................................................................................................................................................................................................................................................20130.0810010
..............................................................................................................................................................................................................................................................................................................................TCAACAGCAGCAGCAGC---------------------------------------AAC------------......................................................................................................................................................................................20150.0710010
.....CA-ACAT------------C----------AGCAGC-----------------------AGCAGCAG---------------------------------------------------------------------CA............................................................................................................................................................................................................................................................................................................................................................................................................................................23160.0611000
..............................................................................................................................................................................................................................................................................................................................TCAACAGCAGCAGCAGC---------------------------------------AA...................................................................................................................................................................................................19180.0610010
..........AT------------C----------AGCAGC-----------------------AGCAGCAG---------------------------------------------------------------------CAA---C---....................................................................................................................................................................................................................................................................................................................................................................................................................................21180.0610010
...AGCA-ACAT------------C----------AGCAGC-----------------------AGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510010
............................................................................................................................................................................................................................................................................................................................CATCAACAGCAGCAGCAGC---------------------------------------.....................................................................................................................................................................................................19200.0510010
droYak3
TGCAGCA-TTCA--A------G-TCG-----CGCCTGCAAC-----------------------AGCAACAGCTA------------------------------------------------------------------------C---TGCAGCAGCAC------------CAGC-------------------------------------------------------------------------------AACAGATACAGCA---------------------------------------GCAGCAGCAGCACGAGCAGCAGCAGC---------------------------------------------------AACAG---CAACAGGAGCAT---CAG---------------------------------------------CAA-C-------------------------------------------------AGGAGCTGCA---------GCAACAGCAACAACAGCAACAGCAGCAGCAATCTCAGCAGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAGCAACAGCAGC...............21200.05100100000000
droEre2
G-CT----AATG-----------CT----------------------------------------------GCAG-------CAACAGCAG-CAGCAACA------------------GC-------------------------------AGCAGCA---ACAACAGCAGCTGCAGCAG------CAGCAACAACAGCAGCTACAGCAGCAGC-------------------------------AACAA------------CAG---------------------------------------------------------------------------------------------------------------CAG---------------CTGCAG---CAG---CAG---------------------------------------------CAA-CAACAGCAGCTGC----------------------------------AGCAGCAACAAC---T------GCAGCAGCAACTGCAACAACAGCAGCTGCAACTGCAACAGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........................................................................................................................................................................................AGCAACAACAGCAGCTACAGCA..........................................................................................................................................................................................................................................................................................................................................................................2220.5010000100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAACAACAGCAGCTGCA...........1920.5011000000
..........................................................................................................................................................................................CAGCAACAACAGCAGCTACAGCAGCA.......................................................................................................................................................................................................................................................................................................................................................................2620.5010000010
...................................................................................................A------------------GC-------------------------------AGCAGCA---ACAACAGC..................................................................................................................................................................................................................................................................................................................................................................................................................18200.1530000030
............................................................................................................................................................CA---ACAACAGCAGCTGCAGCA........................................................................................................................................................................................................................................................................................................................................................................................................2070.1410000100
.....................................................................................................................................................................................................................C-------------------------------AACAA------------CAG---------------------------------------------------------------------------------------------------------------CAG---------------CTGCAG---CA......................................................................................................................................................................2070.1410000100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA-CAACAGCAGCTGC----------------------------------AGCA...........................................................2070.1410000100
................................................................................................AACA------------------GC-------------------------------AGCAGCA---ACAACAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................22200.1020000200
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCTGC----------------------------------AGCAGCA........................................................19130.0810001000
...................................................................................................................................................................AACAGCAGCTGCAGCAG------CA...............................................................................................................................................................................................................................................................................................................................................................................................19130.0810001000
........................................................................................................................................................................................................................................................AA------------CAG---------------------------------------------------------------------------------------------------------------CAG---------------CTGCAG---CAG---CA................................................................................................................................................................19130.0810001000
.......................................................................GCAG-------CAACAGCAG-CAGCAACA------------------GC-------------------------------AGCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................29200.0510100000
.............................................................................................................................................................................GCAGCAG------CAGCAACAACAGCAGC.................................................................................................................................................................................................................................................................................................................................................................................23200.0510000100
..................................................................................CAACAGCAG-CAGCAACA------------------GC-------------------------------....................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000
.............................................................................................AGCAACA------------------GC-------------------------------AGCAGCA---ACA.......................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510001000
................................................................................................AACA------------------GC-------------------------------AGCAGCA---ACAACAGCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................24200.0511000000
............................................................................................................................................................................................................................................................................................................................................................................................................GCAG---CAG---CAG---------------------------------------------CAA-CAACAGCAGC....................................................................................................23200.0510000100

Generated: 05/16/2015 at 09:20 PM