ID:

dvi_7587

 Coordinate:

scaffold_12875:17656151-17656301 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-30.2 -30.19 -29.89

Flybase annnotation

CDS [Dvir\GJ20060-cds]; exon [dvir_GLEANR_5518:4]; intron [Dvir\GJ20060-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TCTCTCTCTGTTGTCGCTGTGTTTGCTCTTGTATTGCTGTCACGCATTACCAACACCAACACTACCACTACCACCCACCCCCTCATTATTCCCCGCCCCTTTCCACATCATTCACCTACTCTCTATACACTCATAATACACACGACGGGCGGCGGGCGGCGGGCTGTGGCGCATTAGATCTTTTGGTCGATCAGGCAACAGCGGCAGCAGCTGCGGCTGCAGCAGGTGGAGGTGATCCGGCGTCTGCTGCA
**************************************************.......................(((.(((((..........((((((................................................)))))).))).)).)))((((.((......((((....))))......)).))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528803
follicle cells		 M047
female body
 V116
male body		 SRR060670
9_testes_total
 SRR060678
9x140_testes_total
 SRR060655
9x160_testes_total
 SRR060673
9_ovaries_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060685
9xArg_0-2h_embryos_total
 V053
head
..................................................................ACTACCACCCGTCCCCT........................................................................................................................................................................ 17 2 10 3.80 38 38 0 0 0 0 0 0 0 0 0
......................TAGCTCGTGTATTGCTGTC.................................................................................................................................................................................................................. 19 2 1 2.00 2 0 0 0 1 1 0 0 0 0 0
..............................................................................................................................................................................TAGATCTTTTGGTTGATTAGCCA...................................................... 23 3 1 1.00 1 0 0 0 0 0 0 1 0 0 0
.....................................................................................................................................................................................................................................AGGTGATCCGGCGTCTGC.... 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0
...........TGTCGCTGTGTTTGCTCT.............................................................................................................................................................................................................................. 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
...............................................................................................................................................................................................................................AGGTGGAGGTGATCCGGCGTCTGC.... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................AGATCTTTTGGTCGATCAGGCAACAG.................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................TTTGGTCGATCAGGCAACAGCGGC.............................................. 24 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0
......................................................................................................................................................................................................CAGCGGCGGCAGCTGCGGCTGCA.............................. 23 1 3 0.67 2 0 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................AGGTGTTGGTGATCCGGC.......... 18 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0
......................TAGCTCGTGTATTGCTGT................................................................................................................................................................................................................... 18 2 7 0.29 2 0 0 0 1 1 0 0 0 0 0
........................................................................................................................................................................................................................TGGCAGCAGGTGGAGGTGGTC.............. 21 3 5 0.20 1 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

AGAGAGAGACAACAGCGACACAAACGAGAACATAACGACAGTGCGTAATGGTTGTGGTTGTGATGGTGATGGTGGGTGGGGGAGTAATAAGGGGCGGGGAAAGGTGTAGTAAGTGGATGAGAGATATGTGAGTATTATGTGTGCTGCCCGCCGCCCGCCGCCCGACACCGCGTAATCTAGAAAACCAGCTAGTCCGTTGTCGCCGTCGTCGACGCCGACGTCGTCCACCTCCACTAGGCCGCAGACGACGT
**************************************************.......................(((.(((((..........((((((................................................)))))).))).)).)))((((.((......((((....))))......)).))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total V053
head
 V047
embryo
 V116
male body		 GSM1528803
follicle cells		 SRR060662
9x160_0-2h_embryos_total
 M047
female body
.................................................................GAGATGTTGGGTGAGGGAGT...................................................................................................................................................................... 20 3 9 0.78 7 7 0 0 0 0 0
..............................................................................................CGGTGAAAGGTGTAGTAAG.......................................................................................................................................... 19 1 2 0.50 1 0 1 0 0 0 0
................................................................TGTGATGTTGGGTGAGGGAGT...................................................................................................................................................................... 21 3 3 0.33 1 1 0 0 0 0 0
.................................................................GGGATGTTGGGTGAGGGAGT...................................................................................................................................................................... 20 3 9 0.22 2 2 0 0 0 0 0
................................................................................GGAAGAATACGGGGCGGGGAA...................................................................................................................................................... 21 3 6 0.17 1 0 0 1 0 0 0
.............................................................................GGGGGACTAGTAAGGGGGGGGG........................................................................................................................................................ 22 3 6 0.17 1 0 1 0 0 0 0
......................................................................................................................................................CCGCCCGCCGCCCGCGTCCGC................................................................................ 21 3 10 0.10 1 0 0 0 1 0 0
...............................................................TGGTGATGCTCGGAGGGGG......................................................................................................................................................................... 19 3 12 0.08 1 0 0 0 0 1 0
AGAGAGAGATAACATCGAC........................................................................................................................................................................................................................................ 19 2 15 0.07 1 0 0 0 0 0 1
................................................................................................GGGAAAGGTGCCGTACGTG........................................................................................................................................ 19 3 16 0.06 1 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12875:17656101-17656351 - dvi_7587 TC---TCT-----CT--------CTGTT---------GTCGC--------TGTGT-TTGCTC------T-------TG---TATTGCTGTCACGCATTACC---------------------------------------------AACACCAACACTAC----------------------------------------------------------------------------------------------------CACTACCACCCACCCCCTCATTATTCCCC--GCCCCTTTCCACA----------------------------------------------------------------------TCAT-TCACCT-------ACTCTCTATACACTCAT------AATACACACGACG--GGCGGCGGGCGGCGGGCTG--------------------------------------------------------------------------------------TGGCGC-----ATTAGATCTTTTGGTCGATCAGGCAACAGCGGCAGCAGCTGCGGCTGCAGCAGG------------TGGAGGTGATCCGGCGTCTGCTGCA---------------
droMoj3 scaffold_6496:11280507-11280774 - TC---TGT-----TT--------CTGTT---------GTCGC--------TGTGT-TTGCTC------T-------CG---TATTGCTGTCACGCATTACC---------------------------------------------AACACCAACACCAACACCAATAC-----CTAATCCACCCACT--CATGCTC-------C--------------------------------------CCTC-------------------------CCCACTCACTCTTCCCC--G----------------------------------------------------------------------------------TCAT-TCACTT-------ACTCTC-----ACTCATCATAAAAATACACACGGCGGCGGCGGCGGGCGGCGGGCTG--------------------------------------------------------------------------------------TGGCGT-----ATTAGATCTTTTGGTCGATCAGGCAACAGCGGCAGCAGCTGCGGCTGC---GGCAGCAG------GTGGAGGTGATCCGGCGAATGCTGCA---------------
droGri2 scaffold_15245:14027271-14027580 + TC---TCT---------------CTGTGTTGTCTGTTGTCGC--------T--GT-TTGT-----CGCTCGATT--TG---TGTTGCTGTCATGCATCAAC---------------------------------------------CAC---------------------------AACTCTCCACTTCTTTC------CACTATC------------------------------------------------------CACCACCACCCACTCTC---TTACTCCCC--ACACTTTAACTCACCACACTTCAACTCACCACCATCCCATCACC------------------------------CATCACATCTTATA----------------------------------------TAAATGGCGGCGGCGGCGGGCG----GCTA--------------------------------------------------------------------------------------TGGCGC---AAATTAGATCTTTTGGTCGATCAGGCAACAGCGGCAGCAGCTGCAGCTGC---AGCAGCAGCGGGCGGAGGAGGTGATCCGGCAGCGGCGGCGGCCCACCACCATCAT
droWil2 scf2_1100000004513:1911099-1911405 - TA---AATCCTCTCAATATATATATGCG------------------CTTGTATGTCTTGC--------C-------TG-------GCTTTTGCAC--CAAAAACCACAAATTAACCCAATCCACAACCAAATCCAATCCAAATCCATCC--------------------ATCCATCGATCCACCCATC--CATGCTA-------------------------------------------------------------------------------------------------------------------------------------------------CACACACGCAATTTG--A--AC-----ATACTTCATC-CATGT-------AC--------------------------TCTTGGCG--GGCGGCGGGTGGCGGGCTGATATACACACACACACTCACATAACACATACACACACACACCTT---ACACTCG-------------------------------------------AACAGATCTTCTGGTCGATCAGGCCACAGCCGCAGC---TGCAGCAGC---TGC------------CGG---TGATCCAACG---GCT------------------
dp5 3:16292881-16293166 + TC---TAT-----GT--------TCGCT---------G-CGCTGTGCTTGTGTCT-GTGT--GTGTGCGTGTTACTTGTA--ATTGCTATTGCAC--CACC---------------------------------------------ACC--------------------A-------CCCCAC--ATCACC-CCCTATCCGCACTA------------------------------------------------------CATCATCATCCATCACC---TAACTGATTGCAC--------------------------------------ACTACAC--TACACACACCTCATG-G--C-ACCACATTACACCTCATC-----------------------------------------TCTTGGTG--GGCGGCGGGCG-CGGTCTGAACGAAC----------------------------------ACATCTACAAC----------------------------------------------ACAGATCTCCTGGTTGATCAGGCAACTGCCGCAGCAGCAGCAGCCGC---GGC------------TGCCGGGGATCCCTCGGTTGCC------------------
droPer2 scaffold_4:471980-472276 - TC---GCT-----G----------CGCT---------G-CGCTGTGCTTGTGTCT-GTGT--GTGTGCGTGTTACTTGTA--ATTGCTATTGCAC--CACC---------------------------------------------ACC--------------------A-CCACCC--------------------------------------------------CACATCACCCCACATCACCCCCTATCCGCACTACATCATCATCCATCACC---TAACTGATTGCAC--------------------------------------ACTACAC--TACACACACCTCATG-G--C-ACCACATTATACCTCATC-----------------------------------------TCTTGGTG--GGCGGCGGGCG-CGGTCTGAACGAAC----------------------------------ACATCTACTA----------------------------------------------CACAGATCTCCTGGTCGATCAGGCAACTGCCGCAGCAGCAGCAGCCGC---GGC------------TGCCGGGGATCCCTCGGTTGCC------------------
droAna3 scaffold_13266:5856609-5856868 - CT---CCT-----CA--------CTGTG------------------CTCGTGTGT-T-AT--------T-------CG---TACTGCTGTTGCAC--CAAA---------------------------------------------AAA--------------------------AAAAAAATCAATCATTTAACT---TGCACCGCCAC----AT-----------CACATCACAT------------------------------------------------C--------------------------------ACTGCACCACC----AACAC-------------------------AACACAACACCTCATCCCAC-CAAAACCAAC--------------------------CACTGGCG--GGCGGCGGGCG-CGGGCTGATCGACA-------------------------------------------ACAAAAA-----------------------------TGGAACCACAAATTAGATCTTCTGGTGGATCAGGCCACGGCAGCAGCAGCTGCAGCCGC---GGC------------GGCTGGGGATCCGA---CAGCC------------------
droBip1 scf7180000395839:14863-15152 - CC---TTC-----AC--------CTGTG------------------TTCGTGTGT-T-AT--------T-------CG---TACTGCTATTGCAC--CCAA---------------------------------------------AAA--------------------A-TCACCGA---ATCCATCATTTAACT---TGCACCGCCATGCCATGC---ATCACAT----------------------------------------------------------GACTGC---------------------------ACCATGCCACCAT--AACAC--C---------------AC----------AACACCTCCATCCAT-C-------ACC-------------------------A-CTGGCG--GGCGGCGGGCG-CGGGCTGATCGATA----------------------------------ATA-TCACAACCGAACAAC----CATCAAAACTTG-----GAAATTGGAACCACCAAATAGATCTTCTGGTTGATCAGGCCACGGCAGCAGCAGCTGCAGCCGC---GGC------------GGCTGGAGATCCCA---CAGCC------------------
droKik1 scf7180000302385:192838-193132 + T--------------------------------------------------GT-T-TTGC--------C-------CGTAATACTGCTATTGCAC--CCGAAA-------------------------------------------CCC--------------------A---------CCATCGATCATCT--TTAACTGCACCACACTC---ATC---ACAACACCATTCAACCAAACATCACACACCATC-GAA-TC---------------------------------------AAACATCACACACCAACTCAT----------------------------CATCACT-G--C-AACACA-AAAACCTCATC-----------------------------------------ACTTGGCG--GGCGGCGGGCG-CGGGCTGATCGATA----------------------------------C---CAACAACCAAAA--------------CTATC-----AA-AATGAAAAAAACCTTCAGATCTGCTTGTGGATCCGGCCACGGCAGCAGCAGCTGCAGCGGC---AGC------------GGGTGGCGATCCTTCGGTGGCC------------------
droFic1 scf7180000453948:363438-363707 - AC---TCC-----CA--------CTGTG------------------CTTATGTGT-TTGC--------C-------CG---TATTGCTATTGCAC--CTGA---------------------------------------------TCC--------------------A-CCACCGACCCACCGATCATCTTGCCAAACGCACCGCACA----AAC---ACAAAATC------------------------------------------------------------------------------------------ACTT-------------CAT--CTCAC-----------AC-----------TCACCTCATC-----------------------------------------ACTTGGCG--GGCGGCGGGCG-CGGGCTGATCGAAA----------------------------------CTT-CTGCAACCGAAACGAAATG----AAAACATC-----GA-ATTAAAAC-----AACAGATCTGCTGGTGGATCCGGCTACCGCTGCAGCAGCTGCAGCCGC---TGC------------TGGTGGGGATCCGGGGCTCGCC------------------
droEle1 scf7180000491349:808029-808308 - AC---TCC-----TA--------CTGTG------------------CTTGTGTGT-TTGC--------C-------CG---TATTGCTCTTGCAC--CTGA---------------------------------------------TCC--------------------A-CCACCGCCCCATCGATCATCTCGCTAACTGCACCGCACA----AAC---ACAACATC------------------------------------------------------------------------------------------ACCATGTCACCATAAAACAC--C---------------AC-----------ACACCTCATC-----------------------------------------ACTTGGCG--GGCGGCGGGCG-CGGTCTGATCGAAC----------------------------------CTT-CTTCAATCGAAACGAAACC----AAA----CGAAACGA-AACGAAAC-----AACAGATCTGCTGGTAGATCCGGCTACGGCCGTAGCAGCTGCAGCCGC---GGC------------TGGTGGGGATCCGGGGCTCGCC------------------
droRho1 scf7180000777200:382383-382654 + C----TCC-----CA--------CTGTG------------------CTTGTGTGT-TTGC--------C-------CG---TATTGCTATTGCAC--CTGA---------------------------------------------TCC--------------------A-CCACCGACCCACCGATCATTTCGCTAACTGCACCGCACA----AAC---ACAACATC------------------------------------------------------------------------------------------ACTACGTTACCATATAACAC--C---------------AC-----------ACACCTCATC-----------------------------------------ACTTGGCG--GGCGGCGGGCG-CGGTCTGATCGAAC----------------------------------CTT-CTCCAAACGAAACAAAA---------CCGTC-----GG-AAC-AAAC-----AACAGATCTGCTGGTAGATCCGGCTACGGCCGCAGCAGCTGCAGCCGC---TGC------------TGGTGGGGATCCGGGGCTCGCC------------------
droBia1 scf7180000301592:215264-215549 + AC---TCC-----CA--------ACGTG------------------CTTGTGTGT-TTGC--------C-------CG---TATTGCTATTGCAC--CTGA---------------------------------------------TCC--------------------ACCCACCGACCCACCGATCATCTCGCTATC-GCACCACACA----AAC---ACCACATC------------------------------------------------------------------------------------------A--------TCAAATTTCAC--CACACACTC-------G--C--ACACACAACACCTCATC-----------------------------------------ACTTGGCG--GGCGGCGGGCG-CGGGCTGATCGAAC----------------------------------CTT-CTCCAATCGGAACGATATG----ATACCATC-----AA-AACGAAAC-----AACAGATCTGCTGGTGGATCCGGCCACGGCCGCAGCAGCAGCTGCCGC---TGC------------TGGTGGGGATCAGGGGCTCGCC------------------
droTak1 scf7180000414188:44582-44831 + ------CC-----CA--------CTGTG------------------CTTGTGTGT-TTGC--------C-------CG---TATTGCTATTGCAC--CTGA---------------------------------------------TCC--------------------A-CCACCGACCCACCGATCATCTCGCTAACTGCACCGCACA----A--------------------------------------------------------------------------------------------CACACAACATCACCAT-------TAAAACACAAC---------------AC-----------ACACCTCATC-----------------------------------------ACTTGGCG--GGCGGCGGGCG-CGGGCTGATCGAAC------------------------------------------------------------------ATC-----GA-AACGAAACACAACAACAGATCTGCTGGTGGATCCGGCCACAGCCGCCGCAGCTGCAGCCGC---TGC------------TGGTGGGGATCCGGGGCTCGCC------------------
droEug1 scf7180000409462:2774705-2774979 - C----TCC-----CA--------CCGTG------------------CTTGTGTGT-TTGC--------C-------CG---TATTGCTATTGCAC--CTGA---------------------------------------------TTC--------------------A-TCAACGACCCACCGATCATTTCGCTAACTGAACCGCACA----AAC---ACAACATC------------------------------------------------------------------------------------------ACTTTGCAACCATTTAACAC--C---------------ACACA--CA-ACAACACCTCATC-----------------------------------------ACTTGGCG--GGCGGCGGGCG-CGGGCTGATCGAAC----------------------------------CTT-CTTCAAC-G--------------AATCCATC-----GA-AACGAAAC-----AACAGATCTGTTAGTAGATCCGGCCACAGCCGCAGCAGCTGCAGCCGC---TGC------------TGGTGGGGATCCGGGGCTCGCC------------------
dm3 chr2R:10064453-10064747 + AA---TCC-----CA--------TTGTG------------------CTTGTGTGT-TTGC--------C-------CG--ATTTTGCTATTGCAC--CCGA---------------------------------------------TCC--------------------A-CCACCGACCCACCGATCATCTCGTTAACTGCACCGCATA----AAAACTACAACATT------------------------------------------------------------------------------------------ACCATCTCACCATATAATAA--C---------------ACA----CACACAACACCTCATC-----------------------------------------ACTTGGCG--GGCGGCGGGCG-CGGGCTGATCGAAC----------------------------------CTTCCTTCAACCGAAATGAAACGTATCAACCCATC-----GA-ATTGAAAA-----AACAGATCTGCTAGTGGATCCGGCCACGGCCGCAGCAGCTGCAGCCGC---CGC------------TGGTGGGGATTCGGGTCTCGCC------------------
droSim2 2r:10771531-10771827 + dsi_16269 AA---TCC-----CA--------TTGTG------------------CTTGTGTGT-TTGC--------C-------CG--ATTTTGCTATTGCAC--CCGA---------------------------------------------TCG--------------------A-CCACCGACCCACCGATCATCTCGCTAACTGCACCGCACA----AAAACTACAACATT------------------------------------------------------------------------------------------ACCATCTCACCATATAACAC--C---------------ACACA--CACACAACACCTCATC-----------------------------------------ACTTGGCG--GGCGGCGGGCG-CGGGCTGATCGAAC----------------------------------CTTCCTCCAACCGAAATGAAACGTATCAACCCATC-----GA-ATTGAAAC-----AACAGATCTGCTGGTGGATCCGGCCACGGCCGCAGCAGCAGCAGCCGC---TGC------------TGGTGGGGATTCGGGTCTCGCC------------------
droSec2 scaffold_1:7572114-7572412 + AA---TCC-----CA--------TTGTG------------------CTTGTGTGT-TTGC--------C-------CG--ATTTTGCTATTGCAC--CCGA---------------------------------------------TCG--------------------A-CCACCGACCCACCGATCATCTCGCTAACTGCATCGCACA----AAAACTACAACATT------------------------------------------------------------------------------------------ACCATCTCACCATATAACAC--C---------------ACACACACACACAACACCTCATC-----------------------------------------ACTTGGCG--GGCGGCGGGCG-CGGGCTGATCGAAC----------------------------------CTTCCTCCAACCGAAATGAAACGTATCAACCCATC-----GA-ATTGAAAC-----AACAGATCTGCTGGTGGATCCGGCCACGGCCGCAGCAGCAGCAGCCGC---TGC------------TGGTGGGGATTCGGGTCTCGCC------------------
droYak3 2R:10000562-10000850 + ATAAATCC-----CA--------TTGTG------------------CTTGTGTGT-ATGC--------C-------CG---TTTTGCTATTGCAC--CCGT---------------------------------------------TCC--------------------A-CCAC--------CGATCATCTCGCTAACTGCACCGCACC----A-AACAACAAAATT------------------------------------------------------------------------------------------ACCATCTCATCATATAACAC--C---------------ACACA--CACACAACACCTCATC-----------------------------------------ACTTGGCG--GGCGGCGGGCG-CGGGCTGATCGAAC----------------------------------CTT-CTCCAACCGAAATGAAACGTATCAACCCATC-----GA-ATTGAAAC-----AACAGATCTGCTGGTGGATCCGGCCACGGCCGCAGCAGCTGCAGCCGC---TGC------------TGGTGGGGATTCGGGTCTCGCC------------------
droEre2 scaffold_4845:15773307-15773599 - AA---TCC-----CA--------TTGTG------------------CTTGTGTGT-TTGC--------C-------CG---TTTTGCTATTGCAC--CCGT---------------------------------------------TCC--------------------A-CCACCGACCCAACGATCATCTCGCTAACTGCACCGCACC----AAAACTTCAAAATT------------------------------------------------------------------------------------------ACCATCTTACCATATAACAC--C---------------ACA----CACACAACACCTCATC-----------------------------------------ACTTGGCG--GGCGGCGGGCG-CGGGCTGATCGAAC----------------------------------CTA-CTCCAACCAAAATGAAACGTACCAACCCATC-----GA-ATTGAAAC-----AACAGATGTGCTGGTGGATCCGGCCACGGCCGCAGCAGCAGCAGCCGC---TGC------------TGGTGGGGATTCGGGTCTCGCC------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TC---TCT-----CT--------CTGTT---------GTCGC--------TGTGT-TTGCTC------T-------TG---TATTGCTGTCACGCATTACC---------------------------------------------AACACCAACACTAC----------------------------------------------------------------------------------------------------CACTACCACCCACCCCCTCATTATTCCCC--GCCCCTTTCCACA----------------------------------------------------------------------TCAT-TCACCT-------ACTCTCTATACACTCAT------AATACACACGACG--GGCGGCGGGCGGCGGGCTG--------------------------------------------------------------------------------------TGGCGC-----ATTAGATCTTTTGGTCGATCAGGCAACAGCGGCAGCAGCTGCGGCTGCAGCAGG------------TGGAGGTGATCCGGCGTCTGCTGCA---------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTGATCCGGCGTCTGC...................1811.001000000000000000000000000000000001000000000000000000000000000000
...........................T---------GTCGC--------TGTGT-TTGCTC------T-------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000001000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGG------------TGGAGGTGATCCGGCGTCTGC...................2411.001000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATCTTTTGGTCGATCAGGCAACAG.............................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTCGATCAGGCAACAGCGGC.........................................................................2411.001000000000000000000000000000000000001000000000000000000000000000
droMoj3
TC---TGT-----TT--------CTGTT---------GTCGC--------TGTGT-TTGCTC------T-------CG---TATTGCTGTCACGCATTACC---------------------------------------------AACACCAACACCAACACCAATAC-----CTAATCCACCCACT--CATGCTC-------C--------------------------------------CCTC-------------------------CCCACTCACTCTTCCCC--G----------------------------------------------------------------------------------TCAT-TCACTT-------ACTCTC-----ACTCATCATAAAAATACACACGGCGGCGGCGGCGGGCGGCGGGCTG--------------------------------------------------------------------------------------TGGCGT-----ATTAGATCTTTTGGTCGATCAGGCAACAGCGGCAGCAGCTGCGGCTGC---GGCAGCAG------GTGGAGGTGATCCGGCGAATGCTGCA---------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---GGCAGCAG------GTGGAGGT.................................1811.001000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGGCTG--------------------------------------------------------------------------------------TGGCGT-----ATTAG.....................................................................................................1811.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCGGCGGGCTG--------------------------------------------------------------------------------------TGGCGT-----ATT.......................................................................................................2211.001000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCGGCAGCAGCTGCGGCTGC---.......................................................2611.001000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGGGCTG--------------------------------------------------------------------------------------TGGCGT-----ATTA......................................................................................................1911.001000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCGGCGGGCTG--------------------------------------------------------------------------------------TGGCGT-----..........................................................................................................1911.001000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................TAAAAATACACACGGCGGCGGC...........................................................................................................................................................................................................................2211.001000010
droGri2
TC---TCT---------------CTGTGTTGTCTGTTGTCGC--------T--GT-TTGT-----CGCTCGATT--TG---TGTTGCTGTCATGCATCAAC---------------------------------------------CAC---------------------------AACTCTCCACTTCTTTC------CACTATC------------------------------------------------------CACCACCACCCACTCTC---TTACTCCCC--ACACTTTAACTCACCACACTTCAACTCACCACCATCCCATCACC------------------------------CATCACATCTTATA----------------------------------------TAAATGGCGGCGGCGGCGGGCG----GCTA--------------------------------------------------------------------------------------TGGCGC---AAATTAGATCTTTTGGTCGATCAGGCAACAGCGGCAGCAGCTGCAGCTGC---AGCAGCAGCGGGCGGAGGAGGTGATCCGGCAGCGGCGGCGGCCCACCACCATCATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
TC---TCT---------------CTGTGTTGTCTGTTGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110
droWil2
TA---AATCCTCTCAATATATATATGCG------------------CTTGTATGTCTTGC--------C-------TG-------GCTTTTGCAC--CAAAAACCACAAATTAACCCAATCCACAACCAAATCCAATCCAAATCCATCC--------------------ATCCATCGATCCACCCATC--CATGCTA-------------------------------------------------------------------------------------------------------------------------------------------------CACACACGCAATTTG--A--AC-----ATACTTCATC-CATGT-------AC--------------------------TCTTGGCG--GGCGGCGGGTGGCGGGCTGATATACACACACACACTCACATAACACATACACACACACACCTT---ACACTCG-------------------------------------------AACAGATCTTCTGGTCGATCAGGCCACAGCCGCAGC---TGCAGCAGC---TGC------------CGG---TGATCCAACG---GCT------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GCG--GGCGGCGGGTGGCGGGC.............................................................................................................................................................................................................2012.00200101
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGATCAGGCCACAGCC...........................................................................1812.00220000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GCG--GGCGGCGGGTGGCGG...............................................................................................................................................................................................................1811.00101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GCG--GGCGGCGGGTGGCGGG..............................................................................................................................................................................................................1911.00101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCAGC---TGC------------CGG---TGAT..............................1920.50100010
dp5
TC---TAT-----GT--------TCGCT---------G-CGCTGTGCTTGTGTCT-GTGT--GTGTGCGTGTTACTTGTA--ATTGCTATTGCAC--CACC---------------------------------------------ACC--------------------A-------CCCCAC--ATCACC-CCCTATCCGCACTA------------------------------------------------------CATCATCATCCATCACC---TAACTGATTGCAC--------------------------------------ACTACAC--TACACACACCTCATG-G--C-ACCACATTACACCTCATC-----------------------------------------TCTTGGTG--GGCGGCGGGCG-CGGTCTGAACGAAC----------------------------------ACATCTACAAC----------------------------------------------ACAGATCTCCTGGTTGATCAGGCAACTGCCGCAGCAGCAGCAGCCGC---GGC------------TGCCGGGGATCCCTCGGTTGCC------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GCG-CGGTCTGAACGAAC----------------------------------ACATCTACAAC----------------------------------------------.........................................................................................................2811.0010100000000
...........................................................................................................................................................................................................CTA------------------------------------------------------CATCATCATCCATCACC---T...................................................................................................................................................................................................................................................................................................................................................................................2120.5010100000000
..................................................TGTCT-GTGT--GTGTGCGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18180.0610100000000
droPer2
TC---GCT-----G----------CGCT---------G-CGCTGTGCTTGTGTCT-GTGT--GTGTGCGTGTTACTTGTA--ATTGCTATTGCAC--CACC---------------------------------------------ACC--------------------A-CCACCC--------------------------------------------------CACATCACCCCACATCACCCCCTATCCGCACTACATCATCATCCATCACC---TAACTGATTGCAC--------------------------------------ACTACAC--TACACACACCTCATG-G--C-ACCACATTATACCTCATC-----------------------------------------TCTTGGTG--GGCGGCGGGCG-CGGTCTGAACGAAC----------------------------------ACATCTACTA----------------------------------------------CACAGATCTCCTGGTCGATCAGGCAACTGCCGCAGCAGCAGCAGCCGC---GGC------------TGCCGGGGATCCCTCGGTTGCC------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
CT---CCT-----CA--------CTGTG------------------CTCGTGTGT-T-AT--------T-------CG---TACTGCTGTTGCAC--CAAA---------------------------------------------AAA--------------------------AAAAAAATCAATCATTTAACT---TGCACCGCCAC----AT-----------CACATCACAT------------------------------------------------C--------------------------------ACTGCACCACC----AACAC-------------------------AACACAACACCTCATCCCAC-CAAAACCAAC--------------------------CACTGGCG--GGCGGCGGGCG-CGGGCTGATCGACA-------------------------------------------ACAAAAA-----------------------------TGGAACCACAAATTAGATCTTCTGGTGGATCAGGCCACGGCAGCAGCAGCTGCAGCCGC---GGC------------GGCTGGGGATCCGA---CAGCC------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGCCACGGCAGCAGC......................................................................2011.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCAGCCGC---GGC------------GGCTGGGGA...............................2311.001000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---GGC------------GGCTGGGGATCCGA---.......................1911.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATCAGGCCACGGCAGC.........................................................................1811.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCAGCCGC---GGC------------GGCTGGG.................................2111.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGC---GGC------------GGCTGGGGATCC............................2011.001010000
droBip1
CC---TTC-----AC--------CTGTG------------------TTCGTGTGT-T-AT--------T-------CG---TACTGCTATTGCAC--CCAA---------------------------------------------AAA--------------------A-TCACCGA---ATCCATCATTTAACT---TGCACCGCCATGCCATGC---ATCACAT----------------------------------------------------------GACTGC---------------------------ACCATGCCACCAT--AACAC--C---------------AC----------AACACCTCCATCCAT-C-------ACC-------------------------A-CTGGCG--GGCGGCGGGCG-CGGGCTGATCGATA----------------------------------ATA-TCACAACCGAACAAC----CATCAAAACTTG-----GAAATTGGAACCACCAAATAGATCTTCTGGTTGATCAGGCCACGGCAGCAGCAGCTGCAGCCGC---GGC------------GGCTGGAGATCCCA---CAGCC------------------SizeHit CountTotal NormTotal
No Reads
droKik1
T--------------------------------------------------GT-T-TTGC--------C-------CGTAATACTGCTATTGCAC--CCGAAA-------------------------------------------CCC--------------------A---------CCATCGATCATCT--TTAACTGCACCACACTC---ATC---ACAACACCATTCAACCAAACATCACACACCATC-GAA-TC---------------------------------------AAACATCACACACCAACTCAT----------------------------CATCACT-G--C-AACACA-AAAACCTCATC-----------------------------------------ACTTGGCG--GGCGGCGGGCG-CGGGCTGATCGATA----------------------------------C---CAACAACCAAAA--------------CTATC-----AA-AATGAAAAAAACCTTCAGATCTGCTTGTGGATCCGGCCACGGCAGCAGCAGCTGCAGCGGC---AGC------------GGGTGGCGATCCTTCGGTGGCC------------------SizeHit CountTotal NormTotal
No Reads
droFic1
AC---TCC-----CA--------CTGTG------------------CTTATGTGT-TTGC--------C-------CG---TATTGCTATTGCAC--CTGA---------------------------------------------TCC--------------------A-CCACCGACCCACCGATCATCTTGCCAAACGCACCGCACA----AAC---ACAAAATC------------------------------------------------------------------------------------------ACTT-------------CAT--CTCAC-----------AC-----------TCACCTCATC-----------------------------------------ACTTGGCG--GGCGGCGGGCG-CGGGCTGATCGAAA----------------------------------CTT-CTGCAACCGAAACGAAATG----AAAACATC-----GA-ATTAAAAC-----AACAGATCTGCTGGTGGATCCGGCTACCGCTGCAGCAGCTGCAGCCGC---TGC------------TGGTGGGGATCCGGGGCTCGCC------------------SizeHit CountTotal NormTotal
No Reads
droEle1
AC---TCC-----TA--------CTGTG------------------CTTGTGTGT-TTGC--------C-------CG---TATTGCTCTTGCAC--CTGA---------------------------------------------TCC--------------------A-CCACCGCCCCATCGATCATCTCGCTAACTGCACCGCACA----AAC---ACAACATC------------------------------------------------------------------------------------------ACCATGTCACCATAAAACAC--C---------------AC-----------ACACCTCATC-----------------------------------------ACTTGGCG--GGCGGCGGGCG-CGGTCTGATCGAAC----------------------------------CTT-CTTCAATCGAAACGAAACC----AAA----CGAAACGA-AACGAAAC-----AACAGATCTGCTGGTAGATCCGGCTACGGCCGTAGCAGCTGCAGCCGC---GGC------------TGGTGGGGATCCGGGGCTCGCC------------------SizeHit CountTotal NormTotal
No Reads
droRho1
C----TCC-----CA--------CTGTG------------------CTTGTGTGT-TTGC--------C-------CG---TATTGCTATTGCAC--CTGA---------------------------------------------TCC--------------------A-CCACCGACCCACCGATCATTTCGCTAACTGCACCGCACA----AAC---ACAACATC------------------------------------------------------------------------------------------ACTACGTTACCATATAACAC--C---------------AC-----------ACACCTCATC-----------------------------------------ACTTGGCG--GGCGGCGGGCG-CGGTCTGATCGAAC----------------------------------CTT-CTCCAAACGAAACAAAA---------CCGTC-----GG-AAC-AAAC-----AACAGATCTGCTGGTAGATCCGGCTACGGCCGCAGCAGCTGCAGCCGC---TGC------------TGGTGGGGATCCGGGGCTCGCC------------------SizeHit CountTotal NormTotal
No Reads
droBia1
AC---TCC-----CA--------ACGTG------------------CTTGTGTGT-TTGC--------C-------CG---TATTGCTATTGCAC--CTGA---------------------------------------------TCC--------------------ACCCACCGACCCACCGATCATCTCGCTATC-GCACCACACA----AAC---ACCACATC------------------------------------------------------------------------------------------A--------TCAAATTTCAC--CACACACTC-------G--C--ACACACAACACCTCATC-----------------------------------------ACTTGGCG--GGCGGCGGGCG-CGGGCTGATCGAAC----------------------------------CTT-CTCCAATCGGAACGATATG----ATACCATC-----AA-AACGAAAC-----AACAGATCTGCTGGTGGATCCGGCCACGGCCGCAGCAGCAGCTGCCGC---TGC------------TGGTGGGGATCAGGGGCTCGCC------------------SizeHit CountTotal NormTotal
No Reads
droTak1
------CC-----CA--------CTGTG------------------CTTGTGTGT-TTGC--------C-------CG---TATTGCTATTGCAC--CTGA---------------------------------------------TCC--------------------A-CCACCGACCCACCGATCATCTCGCTAACTGCACCGCACA----A--------------------------------------------------------------------------------------------CACACAACATCACCAT-------TAAAACACAAC---------------AC-----------ACACCTCATC-----------------------------------------ACTTGGCG--GGCGGCGGGCG-CGGGCTGATCGAAC------------------------------------------------------------------ATC-----GA-AACGAAACACAACAACAGATCTGCTGGTGGATCCGGCCACAGCCGCCGCAGCTGCAGCCGC---TGC------------TGGTGGGGATCCGGGGCTCGCC------------------SizeHit CountTotal NormTotal
No Reads
droEug1
C----TCC-----CA--------CCGTG------------------CTTGTGTGT-TTGC--------C-------CG---TATTGCTATTGCAC--CTGA---------------------------------------------TTC--------------------A-TCAACGACCCACCGATCATTTCGCTAACTGAACCGCACA----AAC---ACAACATC------------------------------------------------------------------------------------------ACTTTGCAACCATTTAACAC--C---------------ACACA--CA-ACAACACCTCATC-----------------------------------------ACTTGGCG--GGCGGCGGGCG-CGGGCTGATCGAAC----------------------------------CTT-CTTCAAC-G--------------AATCCATC-----GA-AACGAAAC-----AACAGATCTGTTAGTAGATCCGGCCACAGCCGCAGCAGCTGCAGCCGC---TGC------------TGGTGGGGATCCGGGGCTCGCC------------------SizeHit CountTotal NormTotal
No Reads
dm3
AA---TCC-----CA--------TTGTG------------------CTTGTGTGT-TTGC--------C-------CG--ATTTTGCTATTGCAC--CCGA---------------------------------------------TCC--------------------A-CCACCGACCCACCGATCATCTCGTTAACTGCACCGCATA----AAAACTACAACATT------------------------------------------------------------------------------------------ACCATCTCACCATATAATAA--C---------------ACA----CACACAACACCTCATC-----------------------------------------ACTTGGCG--GGCGGCGGGCG-CGGGCTGATCGAAC----------------------------------CTTCCTTCAACCGAAATGAAACGTATCAACCCATC-----GA-ATTGAAAA-----AACAGATCTGCTAGTGGATCCGGCCACGGCCGCAGCAGCTGCAGCCGC---CGC------------TGGTGGGGATTCGGGTCTCGCC------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCCGC---CGC------------TGGTGGGGATTCGGG.........................2517.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATC-----GA-ATTGAAAA-----AACAG.....................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC------------TGGTGGGGATTCGGGTC.......................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGC---CGC------------TGGTGGGGATTCGGGTCTCG....................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCCGC---CGC------------TGGTGGGGATTCGGG.........................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGCTAGTGGATCCGGCC.................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTGCAGCCGC---CGC------------TGGTGGGGA...............................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCCGC---CGC------------TGGTGGGGATTCGGGT........................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGGGGATTCGGGTCTCGCC------------------2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCCGC---CGC------------TGGTGGGGATTCGA..........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
........................................................................................ATTGCAC--CCGA---------------------------------------------TCC--------------------A-CCACCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAA-----AACAGATCTGCTAGTGG.........................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............A--------TTGTG------------------CTTGTGTGT-TTGC--------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGCTAGTGGATCCGGC..................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTAGTGGATCCGGCCACGGCCGCAG.......................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGGATCCGGCCACGGCCGCA........................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCCGC---CGC------------TGGTGGGGA...............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.....................................................................................................................................................................................ACCGATCATCTCGTTAACTGCACCGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCCGC---CGC------------TGGTGGGGATTCG...........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCTGCAGCCGC---CGC------------TGGTGGGGA...............................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGGCCGCAGCAGCTGCAGCCGC---CGC------------........................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............CA--------TTGTG------------------CTTGTGTGT-TTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAGTGGATCCGGCCAC...............................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCGC---CGC------------TGGTGGGGATTCGG..........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---CGC------------TGGTGGGGATTCGGGTCTC.....................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC------------TGGTGGGGATTCGGGTCTCGC...................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.A---TCC-----CA--------TTGTG------------------CTTGTGTGT-T...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCGC---CGC------------TGGTGGGGA...............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGCAGCCGC---CGC------------TGGTGGGGA...............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCATC-----GA-ATTGAAAA-----AACAG.....................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTGGATCCGGCCACGGCC...........................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................CCTCATC-----------------------------------------ACTTGGCG--GGCGG.........................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCCGC---CGC------------TGGTGGGGATTCGG..........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGTGGATCCGGCCACGGCCGCAG.......................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTGGATCCGGCCACGGCCGCAGC......................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................TATAATAA--C---------------ACA----CACACAACACCTCA...................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCTGCAGCCGC---CGC------------TGGTGGGG................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGCTAGTGGATCCGGCCACGGCCGC.........................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATC-----GA-ATTGAAAA-----AACAG.....................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................GACCCACCGATCATCTCGTTAACTGCAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCGC---CGC------------TGGTGGGGATTCGGGTC.......................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---CGC------------TGGTGGGGATTCGGGT........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCAGCCGC---CGC------------TGGTGGGGA...............................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAGCAGCTGCAGCCGC---CGC------------TGGTGGGGA...............................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTAGTGGATCCGGCCACGGCCGCA........................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGGCCGCAGCAGCTGCAGCCGC---CGA------------........................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGCGGGCG-CGGGCTGAAA........................................................................................................................................................................................................2030.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AA---TCC-----CA--------TTGTG------------------CTTGTGTGT-TTGC--------C-------CG--ATTTTGCTATTGCAC--CCGA---------------------------------------------TCG--------------------A-CCACCGACCCACCGATCATCTCGCTAACTGCACCGCACA----AAAACTACAACATT------------------------------------------------------------------------------------------ACCATCTCACCATATAACAC--C---------------ACACA--CACACAACACCTCATC-----------------------------------------ACTTGGCG--GGCGGCGGGCG-CGGGCTGATCGAAC----------------------------------CTTCCTCCAACCGAAATGAAACGTATCAACCCATC-----GA-ATTGAAAC-----AACAGATCTGCTGGTGGATCCGGCCACGGCCGCAGCAGCAGCAGCCGC---TGC------------TGGTGGGGATTCGGGTCTCGCC------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................................................................................................................................ACCCACCGATCATCTCGCTAACTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGGCCACGGCCGCAGCAG....................................................................1911.00100000100000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GCG--GGCGGCGGGCG-CGGGCTGAAA........................................................................................................................................................................................................2411.00100000000000001000
droSec2
AA---TCC-----CA--------TTGTG------------------CTTGTGTGT-TTGC--------C-------CG--ATTTTGCTATTGCAC--CCGA---------------------------------------------TCG--------------------A-CCACCGACCCACCGATCATCTCGCTAACTGCATCGCACA----AAAACTACAACATT------------------------------------------------------------------------------------------ACCATCTCACCATATAACAC--C---------------ACACACACACACAACACCTCATC-----------------------------------------ACTTGGCG--GGCGGCGGGCG-CGGGCTGATCGAAC----------------------------------CTTCCTCCAACCGAAATGAAACGTATCAACCCATC-----GA-ATTGAAAC-----AACAGATCTGCTGGTGGATCCGGCCACGGCCGCAGCAGCAGCAGCCGC---TGC------------TGGTGGGGATTCGGGTCTCGCC------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................................................................................................................................................................................................................................................................................................................................................................................................................................CG--GGCGGCGGGCG-CGGGC.............................................................................................................................................................................................................1811.0010010
........................................................................................ATTGCAC--CCGA---------------------------------------------TCG--------------------A-CCACCGACCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGCTGGTGGATCCGGCCACGGCCG..........................................................................2711.0010010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GCG--GGCGGCGGGCG-CGGGC.............................................................................................................................................................................................................1911.0010010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTGGTGGATCCGGCCACG..............................................................................2111.0010010
droYak3
ATAAATCC-----CA--------TTGTG------------------CTTGTGTGT-ATGC--------C-------CG---TTTTGCTATTGCAC--CCGT---------------------------------------------TCC--------------------A-CCAC--------CGATCATCTCGCTAACTGCACCGCACC----A-AACAACAAAATT------------------------------------------------------------------------------------------ACCATCTCATCATATAACAC--C---------------ACACA--CACACAACACCTCATC-----------------------------------------ACTTGGCG--GGCGGCGGGCG-CGGGCTGATCGAAC----------------------------------CTT-CTCCAACCGAAATGAAACGTATCAACCCATC-----GA-ATTGAAAC-----AACAGATCTGCTGGTGGATCCGGCCACGGCCGCAGCAGCTGCAGCCGC---TGC------------TGGTGGGGATTCGGGTCTCGCC------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATGAAACGTATCAACCCATC-----G.........................................................................................................................2411.00100100000000
droEre2
AA---TCC-----CA--------TTGTG------------------CTTGTGTGT-TTGC--------C-------CG---TTTTGCTATTGCAC--CCGT---------------------------------------------TCC--------------------A-CCACCGACCCAACGATCATCTCGCTAACTGCACCGCACC----AAAACTTCAAAATT------------------------------------------------------------------------------------------ACCATCTTACCATATAACAC--C---------------ACA----CACACAACACCTCATC-----------------------------------------ACTTGGCG--GGCGGCGGGCG-CGGGCTGATCGAAC----------------------------------CTA-CTCCAACCAAAATGAAACGTACCAACCCATC-----GA-ATTGAAAC-----AACAGATGTGCTGGTGGATCCGGCCACGGCCGCAGCAGCAGCAGCCGC---TGC------------TGGTGGGGATTCGGGTCTCGCC------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAAAC-----AACAGATGTGCTGGTGGATCC.....................................................................................2811.0010000100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCCGC---TGC------------TGGTGGGG................................2011.0011000000

Generated: 05/19/2015 at 02:30 PM