dvi_7380

Name	Class	Family	Strand
T-rich	Low_complexity	Low_complexity	+

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------################################################## AATAATTTATTTATTGTATTACTTTATAAATATATTTTTATATTATTATTTAATGATAAATCATTTGAATTCTATTTGTTTAAAAGTTTTCAGTTATTTTCGAATAGAACTTTATTCATTTTATTGAGCTTGCGCTTTCTGCAACATTTTTAACATATTTTGGTTCCATTTCGAAACTAATTCAAGTTGTATTTCCCGCAGTCTTGCCATCAAGAATGCCGATGAAAATGCGCCCACCAAACGTGATCTCG ************************************************.........................((((............(((((.(((((((..(((((..............((..(((((.....)))))..)).............)))))...))))))).)))))...............))))************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M047 female body	SRR060668 160x9_males_carcasses_total	V047 embryo	SRR060687 9_0-2h_embryos_total
....................................................................................................................................................................................................................AGAATGCCGATGAAAATGCGCCCACCAA...........	28	0	1	1.00	1	0	1	0	0
..........................................................................................................................................................................................TTGAATTTCCCGCAGTCTTGAG...........................................	22	3	1	1.00	1	0	0	1	0
................................................................................................................................................................................................................ATCAAGAATGCCGATGAAAATGCGCCC................	27	0	1	1.00	1	1	0	0	0
.............................................................................................................................................................................................................GCCATCAAAATTGCCGATGAAG........................	22	3	2	0.50	1	0	0	0	1
..............................................................................................................................................................................................................CCATCAAAATTGCCGATGAAG........................	21	3	5	0.20	1	0	0	0	1

TTATTAAATAAATAACATAATGAAATATTTATATAAAAATATAATAATAAATTACTATTTAGTAAACTTAAGATAAACAAATTTTCAAAAGTCAATAAAAGCTTATCTTGAAATAAGTAAAATAACTCGAACGCGAAAGACGTTGTAAAAATTGTATAAAACCAAGGTAAAGCTTTGATTAAGTTCAACATAAAGGGCGTCAGAACGGTAGTTCTTACGGCTACTTTTACGCGGGTGGTTTGCACTAGAGC ************************************************.........................((((............(((((.(((((((..(((((..............((..(((((.....)))))..)).............)))))...))))))).)))))...............))))************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR060676 9xArg_ovaries_total	SRR060686 Argx9_0-2h_embryos_total
.............................................AAGGAATTCCTATTTAGTAAA.........................................................................................................................................................................................	21	3	13	0.08	1	1	0
............................................................................................................................AGTAGAACGCGAAAGAAGTT...........................................................................................................	20	3	15	0.07	1	0	1

Species	Coordinate	ID	Alignment
droVir3	scaffold_12875:16951421-16951671 +	dvi_7380	AATAATTT-ATTTATTGTATTAC------------------------------------TTTATAAATATATTTTTAT------------------------ATT-ATTATT----------------------------------------------------------------------------------------------------------------------------------------------TAATGATAAATCATTTGAATTCT----------------------------------ATTTGTTTAAAAG------------------------------------------------------------------------TTTTCAGTTAT-TTTCGAATAGAACTTTATTCATTTTATTGAGCTTGCGCTTTCTGCAACATTTT-TAACATATTT---TGGTTCCATTTCGAAACTAATTCAAGTTGTATTTCCCGCAGTCTTGCCATCAAGAATGCCGATGAAAATGCGCCCACCAAACGTGA------------------------------------------------TCT--------CG
droMoj3	scaffold_6644:1041-1274 -		ATTTATTT-ATTTTTTTTTTTAT------------------------------------TTATTTATTTATTTTTTAT------------------------TTT-ATTTATTTTTTTTTATTTATTTATTTTATTTTTTTTTTTTTTGACTAGTATGTCTATTAAAAGTGTTCATTTTTATCAAAATAA--------AATT-------TTTAAAAT-----------------------------------------------------------------------------------------------------------ATTTTATTTCTTTAT-----------------------------------------------------------------------------------------TTTT---------AAA--------------ATT-TTACACTAAA--ATTTTTATTTTTTTAAATCTAT------------------------------------------TTGGAGTTCTTAATTAATTCAGA-------------------------------------ATTTTCT--GAAAT--------TT
droGri2	scaffold_14822:401146-401329 -		GTCCATTT-ATTTTATATATTTA------------------------------------TTTATAAATTCTACTAC-------------TT-----------C---ATATTATTTTAT---------------------------------------------------TTA------------CAATCATTTGTCTATTTATTTATTTTTATTTGTATTTATT-----------------------AGTCTATTTATTTTT----ATTTATATTTATTTATCTGTTTATTTATTTTATATATATTTCTAA-------------ATTCTACTACTTCAT-----------------------------------------------------------------------------------------------------------------------------ATA------------------------------------------------------------------------------------------------------------------------------------------ATTTTAT--------TT
droWil2	scf2_1100000004729:970352-970499 -		TATAAACC-CTTCAATTTATTAC------------------------------------TCTATATATATACTTATAT------------------------TCT-CTATATACCACTGAA---------------------------------------------ATGTATG----T--------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTTAAACAAAACTCTCTGACATTTACATAATTTTTTTTCTTATTTTGTTGCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTCGTTTCTTGTTACTT-CCATTA--------CA
dp5	Unknown_group_649:7319-7427 +		TATAATATTATATAATATATATC------------------------------------TATATAATTATAGTTTTATAATATTATTATTTAATATTATTTATTAT-----ATT-------------------------------------------------------TCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTTATATTATTATTATTTATTATAT--------TG
droPer2	scaffold_3199:1059-1157 -		TATAATAT-ATATCTATATAA---------------------------------------------TTATAGTTTTATAATATTATTATTTAATATTATTTATTAT-----ATT-------------------------------------------------------TCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTTATATTATTATTATTTATTATAT--------TG
droAna3	scaffold_13248:1199851-1199949 +		TAGAAACA-AGTTAATATAAAAA------------------------------------TAAATATATTTTATTAT-------CTTTGTTTAATATTTAATAATTT-----ATT-------------------------------------------------------TCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTACT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATATTTAAAAATTGCTT--CTAGT--------TA
droBip1	scf7180000395926:25348-25425 -		ATTTATCT-ATATATATTATTAT------------------------------------TTTTAAATAATATTTTATT---------ATTA-----------T---ATTTTATC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTATGTATTTATTT-GTTCAG--------AA
droKik1	scf7180000302610:858428-858591 -		ATTTTTAT-ATTTTTATATTTT-------------------------------------TATAT--TTATATTTTTATATT---------------------TTT-ATATTTTTATAT---------------------------------------------------------------------------------------------------------------------------------------------------TTTTATATTTTT----------------------------------ATATTTTTATATT------------------------------------------------------------------------TTTATATTTTT-ATATTTTTATATTTTTATATTTTT---------ATA--------------TTT-TTACATTTTTACATTTTTATATTTCTATATTATT------------------------------------------------------------------------------------------------------------T--TTGTA--------TT
droFic1	scf7180000454066:2407187-2407296 +		AATAAATT-TCTTATTGTATTTC------------------------------------TTTAAACATTGAAAGTA--------------------------------------------------------------------------------------------------------------------------GATC-------TCTAAAAG-----------------------------------------------------------------------------------------------------------CTTTTGGTTCTTTATAAAGTTTTAATTAAAACTTTTTTATTTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTTT------AATTTG--------CT
droEle1	scf7180000487735:453-629 +		TAGTATAT-TTGTAGTAT--TAT------------------------------------TTTA-------------------GTATTATTTAGTATTATTTAGTA----TTATT-------------------------------------------------------TTA------------GTATTATTTTAGTATATTTTAGTATATTTTAGTATATTTT------------------------------------------------------------------------------------------------AGTA------------------------------------------------------------------------TATTTTAGTAT-ATTTTAGTATATTTTAGTATATTTTAGTATATTTTAGTATATTTTAGTATATT-TAGTA-------------------------------------------------------------------------------------------T-----------------------------------------------ATTTTA--------GT
droRho1	scf7180000777956:99211-99263 -		CAGTCTGG-CCATCAAGAATGCC------------------------------------GAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAAATGCGCCCACGAAGCGAGA------------------------------------------------TCT--------CG
droBia1	scf7180000298858:2482-2669 +		AATTATTA-AAATAATATATATA------------------------------------TATATATATATATAAATAA------------------------TTC-TTTTTT------------------------------------AATCACTAAATCTGAAAAATTA----------------------------GTCC-------CCTATAAAATATTTTAAAATTTAAATAAATTTTTATTCAAACAATTAACATAA----AAA------------------------------------------------------------------------------------------------------TATATTTATTT--------------------AACAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTATAATTTT---ATTTTTTTTAAAAATATTTAATATTA--------TA
droTak1	scf7180000415846:190021-190175 -		CTTTTTTT-ATTCATTTTTTATT------------------------------------TTTTTTAATTTATTTTTAA------------------------TTT-ATTTTTTATTTAGTT----------------------------------------------------------------------------------------------------------------------------------------------TTTATTTATTTTTT----------------------------------ATTTATTTTTTAT------------------------------------------------------------------------TTATTTTTTCT-TTCTTTTCTATTTTTTTTTCTTTGTCTT-----------------------------------------------------AATTTTT---------------------------------------------TTTGTGCATGTTCAACAG--------------------------------------------------ACT--------TT
droEug1	scf7180000406014:600-700 -		AATATTTA-ATATTTTAATATT-----------------------------------------TTAATATTTTAATAT------------------------TTT-AATATT----------------------------------------------------------------------------------------------------------------------------------------------TAATATTTTAATATTTTAATATT----------------------------------TAATATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATATTTAATATTTAA-T-ATTTAA--------TA
dm3	chr3R:27780790-27780947 -		TATATTTT-ATTTTATATTTTAT------------------------------------TTTATATTTTATTTTATAT------------------------TTT-ATTTTATATTATATT---------------------------------------------------------------------------------------------------------------------------------------------------TTATATTAT-----------------------------------------------------------------ATTTTATATTATA-----------------------------------------TTTTGTATTATATTTTGTATTATATTTTGTATTATATTTTGTA-TTATATTTTGTATTATATTTTGTATTA--------------------------------------------------------------------------------------------------------------------------------------------TATTT--------TG
droSim2	x:8626713-8626840 -		TATATATT-TTTCCTTCGATAAA------------------------------------TGTATATAAATTTTTTTGT------------------------TCT-GGTTTT----------------------------------------------------------------------------------------------------------------------------------------CATTTCTTTTGGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAACTTTGTGTGAGCTGTGATTTTTTTTTCGTTTTTTT---------ATGGTTTTTTTTTCTGCCC--ATTCT--------TA
droSec2	scaffold_1256:4725-4858 +		AATTATCT-ATATAGTATAAAAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCAT---------------------------------------------------------AAGGTCTATTAACAAATAGTATAGA--------------------------------------------------------------------------------------------------TAATTTTTTCT--------------------ATTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTATTGCTTTATTAATTTTATTAATTACAACTATTGTTATAATTTTAGC
droYak3	2R:15498975-15499027 -		CAGTCTGG-CCATCAAGAATGCC------------------------------------GAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAAATGCCCCCACGAAGCGAGA------------------------------------------------TCT--------GG
droEre2	scaffold_4929:21959903-21960044 +		TATAATGG-ATTTTTAGTTTTGTTTTATGAAAATATTTTCTTATTTCTTTATTGTTATT----GTCGTCTTTGACA-----------AATTCTATTTGTCTATTAT-----AGT-------------------------------------------------------AGTTTATTGGTCTTTCCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAGGAAATGTAA------------------------------------TTTTGGTTATCTTAA--------TG

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droVir3

AATAATTT-ATTTATTGTATTAC------------------------------------TTTATAAATATATTTTTAT------------------------ATT-ATTATT----------------------------------------------------------------------------------------------------------------------------------------------TAATGATAAATCATTTGAATTCT----------------------------------ATTTGTTTAAAAG------------------------------------------------------------------------TTTTCAGTTAT-TTTCGAATAGAACTTTATTCATTTTATTGAGCTTGCGCTTTCTGCAACATTTT-TAACATATTT---TGGTTCCATTTCGAAACTAATTCAAGTTGTATTTCCCGCAGTCTTGCCATCAAGAATGCCGATGAAAATGCGCCCACCAAACGTGA------------------------------------------------TCT--------CG	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATGCCGATGAAAATGCGCCCACCAA...................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAAGAATGCCGATGAAAATGCGCCC........................................................................	27	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

ATTTATTT-ATTTTTTTTTTTAT------------------------------------TTATTTATTTATTTTTTAT------------------------TTT-ATTTATTTTTTTTTATTTATTTATTTTATTTTTTTTTTTTTTGACTAGTATGTCTATTAAAAGTGTTCATTTTTATCAAAATAA--------AATT-------TTTAAAAT-----------------------------------------------------------------------------------------------------------ATTTTATTTCTTTAT-----------------------------------------------------------------------------------------TTTT---------AAA--------------ATT-TTACACTAAA--ATTTTTATTTTTTTAAATCTAT------------------------------------------TTGGAGTTCTTAATTAATTCAGA-------------------------------------ATTTTCT--GAAAT--------TT	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
No Reads

droGri2

GTCCATTT-ATTTTATATATTTA------------------------------------TTTATAAATTCTACTAC-------------TT-----------C---ATATTATTTTAT---------------------------------------------------TTA------------CAATCATTTGTCTATTTATTTATTTTTATTTGTATTTATT-----------------------AGTCTATTTATTTTT----ATTTATATTTATTTATCTGTTTATTTATTTTATATATATTTCTAA-------------ATTCTACTACTTCAT-----------------------------------------------------------------------------------------------------------------------------ATA------------------------------------------------------------------------------------------------------------------------------------------ATTTTAT--------TT	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
No Reads

droWil2

TATAAACC-CTTCAATTTATTAC------------------------------------TCTATATATATACTTATAT------------------------TCT-CTATATACCACTGAA---------------------------------------------ATGTATG----T--------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTTAAACAAAACTCTCTGACATTTACATAATTTTTTTTCTTATTTTGTTGCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTCGTTTCTTGTTACTT-CCATTA--------CA	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
No Reads

dp5

TATAATATTATATAATATATATC------------------------------------TATATAATTATAGTTTTATAATATTATTATTTAATATTATTTATTAT-----ATT-------------------------------------------------------TCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTTATATTATTATTATTTATTATAT--------TG	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
.......................................................................................................................................................................................................................................................................................................................................................................................................TTATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTTATATTATTATTATTT.................	24	6	0.33	2	0	0	0	0	0	0	0	2	0	0

droPer2

TATAATAT-ATATCTATATAA---------------------------------------------TTATAGTTTTATAATATTATTATTTAATATTATTTATTAT-----ATT-------------------------------------------------------TCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTTATATTATTATTATTTATTATAT--------TG	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
No Reads

droAna3

TAGAAACA-AGTTAATATAAAAA------------------------------------TAAATATATTTTATTAT-------CTTTGTTTAATATTTAATAATTT-----ATT-------------------------------------------------------TCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTACT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATATTTAAAAATTGCTT--CTAGT--------TA	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
No Reads

droBip1

ATTTATCT-ATATATATTATTAT------------------------------------TTTTAAATAATATTTTATT---------ATTA-----------T---ATTTTATC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTATGTATTTATTT-GTTCAG--------AA	Size	Hit Count	Total Norm	Total
No Reads

droKik1

ATTTTTAT-ATTTTTATATTTT-------------------------------------TATAT--TTATATTTTTATATT---------------------TTT-ATATTTTTATAT---------------------------------------------------------------------------------------------------------------------------------------------------TTTTATATTTTT----------------------------------ATATTTTTATATT------------------------------------------------------------------------TTTATATTTTT-ATATTTTTATATTTTTATATTTTT---------ATA--------------TTT-TTACATTTTTACATTTTTATATTTCTATATTATT------------------------------------------------------------------------------------------------------------T--TTGTA--------TT	Size	Hit Count	Total Norm	Total
No Reads

droFic1

AATAAATT-TCTTATTGTATTTC------------------------------------TTTAAACATTGAAAGTA--------------------------------------------------------------------------------------------------------------------------GATC-------TCTAAAAG-----------------------------------------------------------------------------------------------------------CTTTTGGTTCTTTATAAAGTTTTAATTAAAACTTTTTTATTTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTTT------AATTTG--------CT	Size	Hit Count	Total Norm	Total
No Reads

droEle1

TAGTATAT-TTGTAGTAT--TAT------------------------------------TTTA-------------------GTATTATTTAGTATTATTTAGTA----TTATT-------------------------------------------------------TTA------------GTATTATTTTAGTATATTTTAGTATATTTTAGTATATTTT------------------------------------------------------------------------------------------------AGTA------------------------------------------------------------------------TATTTTAGTAT-ATTTTAGTATATTTTAGTATATTTTAGTATATTTTAGTATATTTTAGTATATT-TAGTA-------------------------------------------------------------------------------------------T-----------------------------------------------ATTTTA--------GT	Size	Hit Count	Total Norm	Total
No Reads

droRho1

CAGTCTGG-CCATCAAGAATGCC------------------------------------GAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAAATGCGCCCACGAAGCGAGA------------------------------------------------TCT--------CG	Size	Hit Count	Total Norm	Total
No Reads

droBia1

AATTATTA-AAATAATATATATA------------------------------------TATATATATATATAAATAA------------------------TTC-TTTTTT------------------------------------AATCACTAAATCTGAAAAATTA----------------------------GTCC-------CCTATAAAATATTTTAAAATTTAAATAAATTTTTATTCAAACAATTAACATAA----AAA------------------------------------------------------------------------------------------------------TATATTTATTT--------------------AACAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTATAATTTT---ATTTTTTTTAAAAATATTTAATATTA--------TA	Size	Hit Count	Total Norm	Total
No Reads

droTak1

CTTTTTTT-ATTCATTTTTTATT------------------------------------TTTTTTAATTTATTTTTAA------------------------TTT-ATTTTTTATTTAGTT----------------------------------------------------------------------------------------------------------------------------------------------TTTATTTATTTTTT----------------------------------ATTTATTTTTTAT------------------------------------------------------------------------TTATTTTTTCT-TTCTTTTCTATTTTTTTTTCTTTGTCTT-----------------------------------------------------AATTTTT---------------------------------------------TTTGTGCATGTTCAACAG--------------------------------------------------ACT--------TT	Size	Hit Count	Total Norm	Total
No Reads

droEug1

AATATTTA-ATATTTTAATATT-----------------------------------------TTAATATTTTAATAT------------------------TTT-AATATT----------------------------------------------------------------------------------------------------------------------------------------------TAATATTTTAATATTTTAATATT----------------------------------TAATATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATATTTAATATTTAA-T-ATTTAA--------TA	Size	Hit Count	Total Norm	Total
No Reads

dm3

TATATTTT-ATTTTATATTTTAT------------------------------------TTTATATTTTATTTTATAT------------------------TTT-ATTTTATATTATATT---------------------------------------------------------------------------------------------------------------------------------------------------TTATATTAT-----------------------------------------------------------------ATTTTATATTATA-----------------------------------------TTTTGTATTATATTTTGTATTATATTTTGTATTATATTTTGTA-TTATATTTTGTATTATATTTTGTATTA--------------------------------------------------------------------------------------------------------------------------------------------TATTT--------TG	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTATTATATTTTGTA-TTATATT...............................................................................................................................................................................	26	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTATTATATTTTGTATTATATT........................................................................................................................................................................................................	26	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTATTATATTTTGTATTA--------------------------------------------------------------------------------------------------------------------------------------------TATT...........	26	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTATTATATTTTGTATTATATT............................................................................................................................................................................................	26	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTA-TTATATTTTGTATTATATT...................................................................................................................................................................	26	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSim2

TATATATT-TTTCCTTCGATAAA------------------------------------TGTATATAAATTTTTTTGT------------------------TCT-GGTTTT----------------------------------------------------------------------------------------------------------------------------------------CATTTCTTTTGGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAACTTTGTGTGAGCTGTGATTTTTTTTTCGTTTTTTT---------ATGGTTTTTTTTTCTGCCC--ATTCT--------TA

Size

Hit Count

Total Norm

Total

M023
Head

M024
Male-body

M025
Embryo

M053
Female-body

O001
Testis

O002
Head

SRR553485
Ovary

SRR553486
Ovary

SRR553487
Ovary

SRR553488
Ovary

SRR618934
Ovary

V044
Embryo

SRR902008
Ovary

SRR902009
Testis

SRR1275487
Male larvae

SRR1275485
Male prepupae

SRR1275483
Male prepupae

No Reads

droSec2

AATTATCT-ATATAGTATAAAAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCAT---------------------------------------------------------AAGGTCTATTAACAAATAGTATAGA--------------------------------------------------------------------------------------------------TAATTTTTTCT--------------------ATTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTATTGCTTTATTAATTTTATTAATTACAACTATTGTTATAATTTTAGC	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
.........................................................................................................................................................................................AATCAT---------------------------------------------------------AAGGTCTATTAACA........................................................................................................................................................................................................................................................................................................................................................................	20	5	699.00	3495	1131	1041	235	1088
................................................................................................................................................................................................................................................................TTAACAAATAGTATAGA--------------------------------------------------------------------------------------------------TACCA......................................................................................................................................................................................................................................................	22	8	235.63	1885	187	183	212	1303
...............................................................................................................................................................................................................................................................ATTAACAAATAGTATAGA--------------------------------------------------------------------------------------------------TACCA......................................................................................................................................................................................................................................................	23	5	229.00	1145	163	178	174	630
..........................................................................................................................................................................................ATCAT---------------------------------------------------------AAGGTCTATTAACA........................................................................................................................................................................................................................................................................................................................................................................	19	5	179.40	897	381	5	135	376
.................................................................................................................................................................................................................................................................TAACAAATAGTATAGA--------------------------------------------------------------------------------------------------TACCA......................................................................................................................................................................................................................................................	21	20	151.75	3035	884	404	1015	732
..................................................................................................................................................................................................................................................................AACAAATAGTATAGA--------------------------------------------------------------------------------------------------TACCA......................................................................................................................................................................................................................................................	20	20	78.50	1570	483	337	348	402
..............................................................................................................................................................................................................................................................TATTAACAAATAGTATAGA--------------------------------------------------------------------------------------------------TACCA......................................................................................................................................................................................................................................................	24	4	49.50	198	71	24	58	45
.........................................................................................................................................................................................AATCAT---------------------------------------------------------AAGGTCTATTAACAA.......................................................................................................................................................................................................................................................................................................................................................................	21	5	38.80	194	78	73	5	38
...................................................................................................................................................................................ACTTCCAATCAT---------------------------------------------------------AAGGTCT...............................................................................................................................................................................................................................................................................................................................................................................	19	5	35.80	179	49	2	111	17
.....................AG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATC.................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	5	27.40	137	94	18	16	9
..................................................................................................................................................................................GACTTCCAATCAT---------------------------------------------------------AAGGT.................................................................................................................................................................................................................................................................................................................................................................................	18	5	27.20	136	4	0	122	10
......................G------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATC.................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	5	24.40	122	51	0	56	15
.........................................................................................................................................................................................AATCAT---------------------------------------------------------AAGGTCTATTAACAAATAGTATA...............................................................................................................................................................................................................................................................................................................................................................	29	5	23.80	119	28	91	0	0
...................................................................................................................................................................................ACTTCCAATCAT---------------------------------------------------------AAGGTCTA..............................................................................................................................................................................................................................................................................................................................................................................	20	5	21.80	109	54	33	20	2
........................................................................................................................................................................................CAATCAT---------------------------------------------------------AAGGTCTATTAACA........................................................................................................................................................................................................................................................................................................................................................................	21	5	21.40	107	43	35	5	24
...................................................................................................................................................................................ACTTCCAATCAT---------------------------------------------------------AAGGTCTAT.............................................................................................................................................................................................................................................................................................................................................................................	21	5	20.80	104	43	24	33	4
....................AAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATC.................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	5	20.20	101	95	3	2	1
....ATCT-ATATAGTATAAAAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	5	19.80	99	93	1	4	1
..........................................................................................................................................................................................ATCAT---------------------------------------------------------AAGGTCTATTAACAA.......................................................................................................................................................................................................................................................................................................................................................................	20	5	18.00	90	43	22	6	19
...................AAAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATC.................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	5	17.40	87	86	1	0	0
...................................................................................................................................................................................ACTTCCAATCAT---------------------------------------------------------AAGGTC................................................................................................................................................................................................................................................................................................................................................................................	18	5	17.40	87	2	0	67	18
....................................................................................................................................................................................CTTCCAATCAT---------------------------------------------------------AAGGTCTAT.............................................................................................................................................................................................................................................................................................................................................................................	20	5	17.20	86	46	14	25	1
.............................................................................................................................................................................................................................................................CTATTAACAAATAGTATAGA--------------------------------------------------------------------------------------------------TACCA......................................................................................................................................................................................................................................................	25	4	17.00	68	51	1	15	1
.....................................................................................................................................................................................TTCCAATCAT---------------------------------------------------------AAGGTCTAT.............................................................................................................................................................................................................................................................................................................................................................................	19	5	17.00	85	19	1	54	11
.........................................................................................................................................................................................AATCAT---------------------------------------------------------AAGGTCTATTAAC.........................................................................................................................................................................................................................................................................................................................................................................	19	5	16.20	81	35	0	19	27
................................................................................................................................................................................................................................................................TTAACAAATAGTATAGA--------------------------------------------------------------------------------------------------TA.........................................................................................................................................................................................................................................................	19	4	16.00	64	2	0	12	50
............................................................ATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCAT---------------------------------------------------------AAGGT.................................................................................................................................................................................................................................................................................................................................................................................	24	5	15.40	77	14	5	57	1
....................................................................................................................................................................................CTTCCAATCAT---------------------------------------------------------AAGGTCTA..............................................................................................................................................................................................................................................................................................................................................................................	19	5	14.60	73	44	0	25	4
..........................................................................................................................................................................................ATCAT---------------------------------------------------------AAGGTCTATTAACAAATAGTATA...............................................................................................................................................................................................................................................................................................................................................................	28	5	14.40	72	43	25	1	3
....................................................................................................................................................................................CTTCCAATCAT---------------------------------------------------------AAGGTCTATT............................................................................................................................................................................................................................................................................................................................................................................	21	5	12.60	63	23	8	27	5
......................................................................................................................................................................................TCCAATCAT---------------------------------------------------------AAGGTCTAT.............................................................................................................................................................................................................................................................................................................................................................................	18	5	12.00	60	4	0	22	34
.....................AG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCA................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	5	11.80	59	52	1	1	5
...........................................................................................................................................................................................TCAT---------------------------------------------------------AAGGTCTATTAACA........................................................................................................................................................................................................................................................................................................................................................................	18	5	11.20	56	29	0	9	18
....ATCT-ATATAGTATAAAAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	5	10.40	52	46	1	5	0
.............................................................................................................................................................................................AT---------------------------------------------------------AAGGTCTATTAACAAAT.....................................................................................................................................................................................................................................................................................................................................................................	19	5	10.00	50	4	0	41	5
.............................................................................................................................................................................................AT---------------------------------------------------------AAGGTCTATTAACAAATAGTATAGA--------------------------------------------------------------------------------------------------...........................................................................................................................................................................................................................................................	27	4	10.00	40	7	3	27	3
...........ATAGTATAAAAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	5	9.80	49	16	8	19	6
......................G------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCA................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	5	9.80	49	30	8	8	3
.............................................................................................................................................................................................AT---------------------------------------------------------AAGGTCTATTAACAAATAGTATAG..............................................................................................................................................................................................................................................................................................................................................................	26	4	9.75	39	5	3	28	3
...........................................................TATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCAT---------------------------------------------------------AAGGT.................................................................................................................................................................................................................................................................................................................................................................................	25	5	9.20	46	6	4	36	0
..............................................................................................................................................................................................T---------------------------------------------------------AAGGTCTATTAACAAATAGTATA...............................................................................................................................................................................................................................................................................................................................................................	24	5	9.00	45	28	4	3	10
..............................................................................................................................................................................................................................................................TATTAACAAATAGTATAGA--------------------------------------------------------------------------------------------------...........................................................................................................................................................................................................................................................	19	4	9.00	36	23	3	10	0
...................................................................................................................................................................................ACTTCCAATCAT---------------------------------------------------------AAGGTCTATT............................................................................................................................................................................................................................................................................................................................................................................	22	5	9.00	45	12	10	21	2
....................................................................................................................................................................................CTTCCAATCAT---------------------------------------------------------AAGGTCT...............................................................................................................................................................................................................................................................................................................................................................................	18	5	8.80	44	4	0	36	4
....................AAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCA................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	5	8.80	44	40	0	3	1
.....................................................................................................................................................................................TTCCAATCAT---------------------------------------------------------AAGGTCTATT............................................................................................................................................................................................................................................................................................................................................................................	20	5	8.40	42	13	2	24	3
......................G------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCAT---------------------------------------------------------AAGGT.................................................................................................................................................................................................................................................................................................................................................................................	26	5	8.20	41	12	4	25	0
..............................................................................................................................................................................................T---------------------------------------------------------AAGGTCTATTAACAAATAGTATAGA--------------------------------------------------------------------------------------------------...........................................................................................................................................................................................................................................................	26	4	7.75	31	14	3	9	5
...........................................................TATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCA................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	5	7.60	38	21	1	6	10
....ATCT-ATATAGTATAAAAG------------------------------------T..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	5	7.60	38	6	5	17	10
.............................................................................................................................................................................................AT---------------------------------------------------------AAGGTCTATTAACAAATAGT..................................................................................................................................................................................................................................................................................................................................................................	22	5	7.40	37	0	1	30	6
...............................................................................................................................................................................................................................................................ATTAACAAATAGTATAGA--------------------------------------------------------------------------------------------------T..........................................................................................................................................................................................................................................................	19	4	7.25	29	9	2	15	3
.....................AG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCAT---------------------------------------------------------AAGGT.................................................................................................................................................................................................................................................................................................................................................................................	27	5	7.20	36	5	10	19	2
...........................................................................................................................................................................................................................................................GTCTATTAACAAATAGTATAGA--------------------------------------------------------------------------------------------------TACCA......................................................................................................................................................................................................................................................	27	4	6.25	25	25	0	0	0
............................................................ATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCAT---------------------------------------------------------AAGGTC................................................................................................................................................................................................................................................................................................................................................................................	25	5	6.00	30	13	5	12	0
...................AAAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCA................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	5	6.00	30	22	3	2	3
..............................................................................................................................................................................................T---------------------------------------------------------AAGGTCTATTAACAAATAGTATAG..............................................................................................................................................................................................................................................................................................................................................................	25	4	6.00	24	17	0	6	1
...................AAAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACTTCCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	5	6.00	30	19	1	3	7
.............................................................TATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCAT---------------------------------------------------------AAGGT.................................................................................................................................................................................................................................................................................................................................................................................	23	5	5.80	29	3	7	14	5
...........................................................TATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATC.................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	5	5.80	29	2	0	17	10
............................................................ATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCAT---------------------------------------------------------AAGGTCT...............................................................................................................................................................................................................................................................................................................................................................................	26	5	5.80	29	7	9	7	6
...............................................................................................................................................................................................................................................................ATTAACAAATAGTATAGA--------------------------------------------------------------------------------------------------...........................................................................................................................................................................................................................................................	18	4	5.75	23	4	0	16	3
...................................................................................................................................................................................ACTTCCAATCAT---------------------------------------------------------AAGGTCTATTAACA........................................................................................................................................................................................................................................................................................................................................................................	26	5	5.40	27	14	5	7	1
.............................................................................................................................................................................................AT---------------------------------------------------------AAGGTCTATTAACAAATAGTATA...............................................................................................................................................................................................................................................................................................................................................................	25	5	5.40	27	5	5	16	1
...........................................................TATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCAT---------------------------------------------------------AAGGTC................................................................................................................................................................................................................................................................................................................................................................................	26	5	5.40	27	6	9	9	3
.............................................................................................................................................................................................AT---------------------------------------------------------AAGGTCTATTAACAAATA....................................................................................................................................................................................................................................................................................................................................................................	20	5	5.20	26	5	2	17	2
..................................................................................................................................................................................GACTTCCAATCAT---------------------------------------------------------AAGGTCT...............................................................................................................................................................................................................................................................................................................................................................................	20	5	5.00	25	12	5	7	1
....................AAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCAT---------------------------------------------------------AAGGT.................................................................................................................................................................................................................................................................................................................................................................................	28	5	5.00	25	5	20	0	0
...........ATAGTATAAAAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	5	4.80	24	4	4	14	2
....................................................................................................................................................................................CTTCCAATCAT---------------------------------------------------------AAGGTCTATTAACA........................................................................................................................................................................................................................................................................................................................................................................	25	5	4.80	24	11	3	10	0
...................................................................................................................................................................................ACTTCCAATCAT---------------------------------------------------------AAGGTCTATTAAC.........................................................................................................................................................................................................................................................................................................................................................................	25	5	4.80	24	14	3	7	0
...........ATAGTATAAAAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	5	4.80	24	9	6	9	0
.....................AG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCAT---------------------------------------------------------AAGGTC................................................................................................................................................................................................................................................................................................................................................................................	28	5	4.80	24	8	14	1	1
................................................................................................................................................................................................................................................................TTAACAAATAGTATAGA--------------------------------------------------------------------------------------------------TACC.......................................................................................................................................................................................................................................................	21	4	4.75	19	7	1	2	9
...............TATAAAAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	5	4.60	23	1	0	18	4
.........................................................................................................................................................................................AATCAT---------------------------------------------------------AAGGTCTATTAA..........................................................................................................................................................................................................................................................................................................................................................................	18	5	4.60	23	2	0	7	14
.........................................................................................................................................................................................................................................................AGGTCTATTAACAAATAGTATA...............................................................................................................................................................................................................................................................................................................................................................	22	5	4.60	23	17	1	3	2
................................................................................................................................................................................................................................................................TTAACAAATAGTATAGA--------------------------------------------------------------------------------------------------T..........................................................................................................................................................................................................................................................	18	4	4.50	18	0	0	15	3
.........................................................................................................................................................................................AATCAT---------------------------------------------------------AAGGTCTATTAACAAA......................................................................................................................................................................................................................................................................................................................................................................	22	5	4.40	22	7	6	0	9
............................................................................................................................................................................................................................................................TCTATTAACAAATAGTATAGA--------------------------------------------------------------------------------------------------TACCA......................................................................................................................................................................................................................................................	26	4	4.25	17	15	0	2	0
......................................................................................................................................................................................TCCAATCAT---------------------------------------------------------AAGGTCTATT............................................................................................................................................................................................................................................................................................................................................................................	19	5	4.20	21	5	0	14	2
.....................................................................................................................................................................................................................................................................................................................................................................................ATTTTTTCT--------------------ATTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTATTGCT.........................................	24	5	4.20	21	0	4	15	2
............................................................ATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCA................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	5	4.20	21	9	0	4	8
..............................................................................................................................................................................................T---------------------------------------------------------AAGGTCTATTAACAAATAGTATAGA--------------------------------------------------------------------------------------------------TA.........................................................................................................................................................................................................................................................	28	4	4.00	16	15	1	0	0
.....................................................................................................................................................................................TTCCAATCAT---------------------------------------------------------AAGGTCTA..............................................................................................................................................................................................................................................................................................................................................................................	18	5	4.00	20	2	0	15	3
..............................................................................................................................................................................................T---------------------------------------------------------AAGGTCTATTAACAAATA....................................................................................................................................................................................................................................................................................................................................................................	19	5	3.80	19	11	0	3	5
..................AAAAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATC.................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	5	3.80	19	19	0	0	0
.....................................................................................................................................................................................TTCCAATCAT---------------------------------------------------------AAGGTCTATTAACA........................................................................................................................................................................................................................................................................................................................................................................	24	5	3.80	19	7	7	5	0
.........................................................................................................................................................................................AATCAT---------------------------------------------------------AAGGTCTATTAACAAATA....................................................................................................................................................................................................................................................................................................................................................................	24	5	3.80	19	15	1	2	1
..............................................................ATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCAT---------------------------------------------------------AAGGT.................................................................................................................................................................................................................................................................................................................................................................................	22	5	3.60	18	1	2	15	0
.........................................................................................................................................................................................AATCAT---------------------------------------------------------AAGGTCTATTAACAAAT.....................................................................................................................................................................................................................................................................................................................................................................	23	5	3.60	18	10	5	0	3
..........TATAGTATAAAAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	5	3.60	18	5	4	5	4
................................................................................................................................................................................................................................................................TTAACAAATAGTATAGA--------------------------------------------------------------------------------------------------TAC........................................................................................................................................................................................................................................................	20	4	3.50	14	4	1	2	7
.................................................................................................................................................................................................................................................................TAACAAATAGTATAGA--------------------------------------------------------------------------------------------------TA.........................................................................................................................................................................................................................................................	18	4	3.50	14	0	0	5	9
........................................................................................................................................................................................................................................................AAGGTCTATTAACAAATAGTATA...............................................................................................................................................................................................................................................................................................................................................................	23	5	3.40	17	10	4	0	3
.............................................................TATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCAT---------------------------------------------------------AAGGTCT...............................................................................................................................................................................................................................................................................................................................................................................	25	5	3.40	17	6	3	4	4
....................................................................................................................................................................................CTTCCAATCAT---------------------------------------------------------AAGGTCTATTAAC.........................................................................................................................................................................................................................................................................................................................................................................	24	5	3.20	16	13	0	3	0
..................................................................................................................................................................................GACTTCCAATCAT---------------------------------------------------------AAGGTCTA..............................................................................................................................................................................................................................................................................................................................................................................	21	5	3.20	16	7	5	3	1
..............................................................................................................................................................................................T---------------------------------------------------------AAGGTCTATTAACAAATAGT..................................................................................................................................................................................................................................................................................................................................................................	21	5	3.20	16	3	4	4	5
............................................................ATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCAT---------------------------------------------------------A.....................................................................................................................................................................................................................................................................................................................................................................................	20	5	3.20	16	8	2	1	5
.....................................................................................................................................................................................TTCCAATCAT---------------------------------------------------------AAGGTCTATTAAC.........................................................................................................................................................................................................................................................................................................................................................................	23	5	3.20	16	9	1	4	2
..............................................................................................................................................................................................T---------------------------------------------------------AAGGTCTATTAACAAAT.....................................................................................................................................................................................................................................................................................................................................................................	18	5	3.00	15	1	0	4	10
................ATAAAAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	5	3.00	15	0	0	10	5
...........................................................................................................................................................................................................................................................GTCTATTAACAAATAGTATA...............................................................................................................................................................................................................................................................................................................................................................	20	5	3.00	15	12	1	0	2
...........................................................................................................................................................................................TCAT---------------------------------------------------------AAGGTCTATTAACAAA......................................................................................................................................................................................................................................................................................................................................................................	20	5	3.00	15	4	2	5	4
.....................................................................................................................................................................................................................................................................................................................................................................................ATTTTTTCT--------------------ATTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTATTGCTT........................................	25	5	3.00	15	0	4	11	0
.....................AG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCAT---------------------------------------------------------AAGGTCT...............................................................................................................................................................................................................................................................................................................................................................................	29	5	3.00	15	2	13	0	0
.................TAAAAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATC.................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	5	2.80	14	9	1	2	2
...................AAAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACTTCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	5	2.80	14	2	0	5	7
..................................................................................................................................................................................GACTTCCAATCAT---------------------------------------------------------AAGGTC................................................................................................................................................................................................................................................................................................................................................................................	19	5	2.80	14	2	0	7	5
...........................................................................................................................................................................................TCAT---------------------------------------------------------AAGGTCTATTAACAA.......................................................................................................................................................................................................................................................................................................................................................................	19	5	2.80	14	6	0	0	8
....................AAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACTTCCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	5	2.80	14	8	0	3	3
..........................................................................................................................................................................................................................................................GGTCTATTAACAAATAGTATA...............................................................................................................................................................................................................................................................................................................................................................	21	5	2.80	14	11	2	0	1
...........................................................TATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCAT---------------------------------------------------------AAGGTCT...............................................................................................................................................................................................................................................................................................................................................................................	27	5	2.80	14	4	5	3	2
..............GTATAAAAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	5	2.80	14	1	3	5	5
.............................................................TATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCAT---------------------------------------------------------AAGGTC................................................................................................................................................................................................................................................................................................................................................................................	24	5	2.80	14	3	6	0	5
......................G------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCAT---------------------------------------------------------AAGGTCT...............................................................................................................................................................................................................................................................................................................................................................................	28	5	2.80	14	4	7	2	1
.......T-ATATAGTATAAAAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACTTCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................	29	5	2.80	14	2	12	0	0
....ATCT-ATATAGTATAAAAG------------------------------------TA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	5	2.80	14	8	2	3	1
...............................................................................................................................................................................................................................................................ATTAACAAATAGTATAGA--------------------------------------------------------------------------------------------------TA.........................................................................................................................................................................................................................................................	20	4	2.75	11	1	1	2	7
...........................................................................................................................................................................................TCAT---------------------------------------------------------AAGGTCTATTAACAAATAGT..................................................................................................................................................................................................................................................................................................................................................................	24	5	2.60	13	0	2	8	3
.........ATATAGTATAAAAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	5	2.60	13	4	2	2	5
...........................................................................................................................................................................................TCAT---------------------------------------------------------AAGGTCTATTAACAAATAGTATA...............................................................................................................................................................................................................................................................................................................................................................	27	5	2.60	13	3	3	2	5
..........................................................................................................................................................................................ATCAT---------------------------------------------------------AAGGTCTATTAACAAAT.....................................................................................................................................................................................................................................................................................................................................................................	22	5	2.60	13	7	3	3	0
......................................................................................................................................................................................TCCAATCAT---------------------------------------------------------AAGGTCTATTAAC.........................................................................................................................................................................................................................................................................................................................................................................	22	5	2.60	13	6	2	5	0
.........................................................................................................................................................................................................................................................AGGTCTATTAACAAATAGTATAGA--------------------------------------------------------------------------------------------------TA.........................................................................................................................................................................................................................................................	26	4	2.50	10	9	1	0	0
...........................................................................................................................................................................................TCAT---------------------------------------------------------AAGGTCTATTAACAAAT.....................................................................................................................................................................................................................................................................................................................................................................	21	5	2.40	12	2	2	2	6
....ATCT-ATATAGTATAAAAG------------------------------------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	5	2.40	12	4	0	1	7
................ATAAAAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATC.................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	5	2.40	12	5	1	6	0
..................................................................................................................................................................................................................................................................AACAAATAGTATAGA--------------------------------------------------------------------------------------------------TACC.......................................................................................................................................................................................................................................................	19	6	2.33	14	8	0	5	1
.............................................................................................................................................................................................................................................................CTATTAACAAATAGTATAGA--------------------------------------------------------------------------------------------------...........................................................................................................................................................................................................................................................	20	4	2.25	9	7	1	1	0
........................................................................................................................................................................................................................................................AAGGTCTATTAACAAATAGTATAGA--------------------------------------------------------------------------------------------------TA.........................................................................................................................................................................................................................................................	27	4	2.25	9	8	1	0	0
.........................................................................................................................................................................................AATCAT---------------------------------------------------------AAGGTCTATTAACAAATAGTA.................................................................................................................................................................................................................................................................................................................................................................	27	5	2.20	11	7	1	1	2
............................................................ATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCAT---------------------------------------------------------AAGG..................................................................................................................................................................................................................................................................................................................................................................................	23	5	2.20	11	9	1	1	0
......................G------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCAT---------------------------------------------------------AAGGTC................................................................................................................................................................................................................................................................................................................................................................................	27	5	2.20	11	2	3	3	3
.....................AG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCAT---------------------------------------------------------AAG...................................................................................................................................................................................................................................................................................................................................................................................	25	5	2.20	11	3	2	4	2
..........................................................................................................................................................................................ATCAT---------------------------------------------------------AAGGTCTATTAAC.........................................................................................................................................................................................................................................................................................................................................................................	18	5	2.20	11	4	0	2	5
........................................................................................................................................................................................CAATCAT---------------------------------------------------------AAGGTCTATTAAC.........................................................................................................................................................................................................................................................................................................................................................................	20	5	2.00	10	4	2	1	3
........................................................................................................................................................................................................................................................AAGGTCTATTAACAAATAGTATAGA--------------------------------------------------------------------------------------------------...........................................................................................................................................................................................................................................................	25	4	2.00	8	3	1	3	1
......................................................................................................................................................................................TCCAATCAT---------------------------------------------------------AAGGTCTATTAACA........................................................................................................................................................................................................................................................................................................................................................................	23	5	2.00	10	6	2	2	0
..........................................................................................................................................................................................ATCAT---------------------------------------------------------AAGGTCTATTAACAAA......................................................................................................................................................................................................................................................................................................................................................................	21	5	2.00	10	3	3	1	3
...........................................................................................................................................................................................TCAT---------------------------------------------------------AAGGTCTATTAACAAATAGTATAG..............................................................................................................................................................................................................................................................................................................................................................	28	4	2.00	8	7	0	0	1
..................AAAAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCA................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	5	2.00	10	8	1	1	0
..............................................................ATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCAT---------------------------------------------------------AAGGTC................................................................................................................................................................................................................................................................................................................................................................................	23	5	2.00	10	4	1	5	0
.............AGTATAAAAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	5	2.00	10	3	1	1	5
...................AAAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCAT---------------------------------------------------------A.....................................................................................................................................................................................................................................................................................................................................................................................	25	5	2.00	10	5	2	1	2
....................................................................................................................................................................................CTTCCAATCAT---------------------------------------------------------AAGGTCTATTA...........................................................................................................................................................................................................................................................................................................................................................................	22	5	2.00	10	2	3	1	4
................ATAAAAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACTTCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	5	1.80	9	4	3	1	1
.................TAAAAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCA................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	5	1.80	9	5	1	2	1
...............................................................TT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCAT---------------------------------------------------------AAGGTCT...............................................................................................................................................................................................................................................................................................................................................................................	23	5	1.80	9	4	4	0	1
.............AGTATAAAAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	5	1.80	9	2	1	2	4
..............GTATAAAAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACTTCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	5	1.80	9	7	0	1	1
..............................................................ATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCAT---------------------------------------------------------AAGGTCT...............................................................................................................................................................................................................................................................................................................................................................................	24	5	1.80	9	3	1	4	1
..........................................................................................................................................................................................................................................................GGTCTATTAACAAATAGTATAGA--------------------------------------------------------------------------------------------------TA.........................................................................................................................................................................................................................................................	25	4	1.75	7	7	0	0	0
..........TATAGTATAAAAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	5	1.60	8	0	4	2	2
....................AAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCAT---------------------------------------------------------A.....................................................................................................................................................................................................................................................................................................................................................................................	24	5	1.60	8	5	0	1	2
...........................................................TATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCAT---------------------------------------------------------A.....................................................................................................................................................................................................................................................................................................................................................................................	21	5	1.60	8	3	0	2	3
.........ATATAGTATAAAAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACTTCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	5	1.60	8	2	6	0	0
.....................AG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCAT---------------------------------------------------------A.....................................................................................................................................................................................................................................................................................................................................................................................	23	5	1.60	8	8	0	0	0
...........................................................TATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCAT---------------------------------------------------------AAGG..................................................................................................................................................................................................................................................................................................................................................................................	24	5	1.60	8	6	1	1	0
..............................................................................................................................................................................................T---------------------------------------------------------AAGGTCTATTAACAAATAGTA.................................................................................................................................................................................................................................................................................................................................................................	22	5	1.60	8	5	1	1	1
..........................................................................................................................................................................................................................................................GGTCTATTAACAAATAGTATAGA--------------------------------------------------------------------------------------------------...........................................................................................................................................................................................................................................................	23	4	1.50	6	5	0	1	0
..............................................................................................................................................................................................................................................................TATTAACAAATAGTATAG..............................................................................................................................................................................................................................................................................................................................................................	18	4	1.50	6	3	0	2	1
.................................................................................................................................................................................................................................................................TAACAAATAGTATAGA--------------------------------------------------------------------------------------------------TACC.......................................................................................................................................................................................................................................................	20	4	1.50	6	4	0	2	0
........................................................................................................................................................................................................................................................AAGGTCTATTAACAAATAGTATAG..............................................................................................................................................................................................................................................................................................................................................................	24	4	1.50	6	4	1	1	0
...................................................................................................................................................................................ACTTCCAATCAT---------------------------------------------------------AAGGTCTATTAA..........................................................................................................................................................................................................................................................................................................................................................................	24	5	1.40	7	3	1	2	1
..........................................................................................................................................................................................ATCAT---------------------------------------------------------AAGGTCTATTAACAAATA....................................................................................................................................................................................................................................................................................................................................................................	23	5	1.40	7	2	0	4	1
.......................................................................................................................................................................................CCAATCAT---------------------------------------------------------AAGGTCTATTAACA........................................................................................................................................................................................................................................................................................................................................................................	22	5	1.40	7	4	0	1	2
.........................................................................................................................................................................................AATCAT---------------------------------------------------------AAGGTCTATTAACAAATAGT..................................................................................................................................................................................................................................................................................................................................................................	26	5	1.40	7	0	3	2	2
.............................................................TATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCAT---------------------------------------------------------A.....................................................................................................................................................................................................................................................................................................................................................................................	19	5	1.40	7	3	0	2	2
..........TATAGTATAAAAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACTTCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	5	1.40	7	1	4	2	0
.........ATATAGTATAAAAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	5	1.40	7	0	5	0	2
......................G------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCAT---------------------------------------------------------AAGG..................................................................................................................................................................................................................................................................................................................................................................................	25	5	1.40	7	6	1	0	0
............................................................................................................................................................................................................................................................TCTATTAACAAATAGTATAGA--------------------------------------------------------------------------------------------------...........................................................................................................................................................................................................................................................	21	4	1.25	5	5	0	0	0
.....................AG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCAT---------------------------------------------------------......................................................................................................................................................................................................................................................................................................................................................................................	22	5	1.20	6	4	1	0	1
.............................................................TATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCAT---------------------------------------------------------AAGGTCTATT............................................................................................................................................................................................................................................................................................................................................................................	28	5	1.20	6	5	1	0	0
............................................................ATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCAT---------------------------------------------------------AAGGTCTA..............................................................................................................................................................................................................................................................................................................................................................................	27	5	1.20	6	2	2	2	0
...........................................................................................................................................................................................TCAT---------------------------------------------------------AAGGTCTATTAACAAATAGTA.................................................................................................................................................................................................................................................................................................................................................................	25	5	1.20	6	0	1	3	2
..................................................................................................................................................................................GACTTCCAATCAT---------------------------------------------------------AAGGTCTATT............................................................................................................................................................................................................................................................................................................................................................................	23	5	1.20	6	5	0	1	0
.......................................................................................................................................................................................CCAATCAT---------------------------------------------------------AAGGTCTATTAAC.........................................................................................................................................................................................................................................................................................................................................................................	21	5	1.20	6	1	2	1	2
..........................................................................................................................................................................................ATCAT---------------------------------------------------------AAGGTCTATTAACAAATAGTA.................................................................................................................................................................................................................................................................................................................................................................	26	5	1.20	6	5	0	0	1
...............................................................TT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCAT---------------------------------------------------------AAG...................................................................................................................................................................................................................................................................................................................................................................................	19	5	1.20	6	6	0	0	0
.....TCT-ATATAGTATAAAAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	5	1.20	6	6	0	0	0
...............................................................TT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCAT---------------------------------------------------------AAGG..................................................................................................................................................................................................................................................................................................................................................................................	20	5	1.20	6	4	0	1	1
.............AGTATAAAAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACTTCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	5	1.20	6	1	2	2	1
..................................................................................................................................................................................GACTTCCAATCAT---------------------------------------------------------AAGGTCTATTAACA........................................................................................................................................................................................................................................................................................................................................................................	27	5	1.20	6	6	0	0	0
.......T-ATATAGTATAAAAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	5	1.20	6	0	3	2	1
....................AAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCAT---------------------------------------------------------AAGGTC................................................................................................................................................................................................................................................................................................................................................................................	29	5	1.20	6	1	5	0	0
..........................................................................................................................................................................................ATCAT---------------------------------------------------------AAGGTCTATTAACAAATAGT..................................................................................................................................................................................................................................................................................................................................................................	25	5	1.20	6	2	2	2	0
....ATCT-ATATAGTATAAAAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	5	1.20	6	6	0	0	0
.............................................................TATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCAT---------------------------------------------------------AAGG..................................................................................................................................................................................................................................................................................................................................................................................	22	5	1.20	6	6	0	0	0
....................AAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCAT---------------------------------------------------------AA....................................................................................................................................................................................................................................................................................................................................................................................	25	5	1.20	6	5	0	0	1
..........TATAGTATAAAAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	5	1.20	6	2	2	1	1
...............................................................TT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCAT---------------------------------------------------------AAGGTC................................................................................................................................................................................................................................................................................................................................................................................	22	5	1.20	6	5	0	0	1
.................................................................................................................................................................................TGACTTCCAATCAT---------------------------------------------------------AAGGT.................................................................................................................................................................................................................................................................................................................................................................................	19	5	1.00	5	1	0	3	1
....ATCT-ATATAGTATAAAAG------------------------------------TATA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	5	1.00	5	1	0	1	3
..........................................................................................................................................................................................................................................................GGTCTATTAACAAATAGTATAGA--------------------------------------------------------------------------------------------------TACCA......................................................................................................................................................................................................................................................	28	4	1.00	4	4	0	0	0
............................................................ATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCAT---------------------------------------------------------AAGGTCTAT.............................................................................................................................................................................................................................................................................................................................................................................	28	5	1.00	5	5	0	0	0
..................................................................................................................................................................................GACTTCCAATCAT---------------------------------------------------------AAGGTCTATTAAC.........................................................................................................................................................................................................................................................................................................................................................................	26	5	1.00	5	5	0	0	0
....................................................................................................................................................................................CTTCCAATCAT---------------------------------------------------------AAGGTCTATTAACAAA......................................................................................................................................................................................................................................................................................................................................................................	27	5	1.00	5	3	0	1	1
.................................................................................................................................................................................................................................................................TAACAAATAGTATAGA--------------------------------------------------------------------------------------------------TAC........................................................................................................................................................................................................................................................	19	4	1.00	4	2	0	2	0
.........................................................................................................................................................................................................................................................AGGTCTATTAACAAATAGTA.................................................................................................................................................................................................................................................................................................................................................................	20	5	1.00	5	5	0	0	0
................ATAAAAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACTTCCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	5	1.00	5	2	0	3	0
.........................................................................................................................................................................................................................................................AGGTCTATTAACAAATAGTATAGA--------------------------------------------------------------------------------------------------TACCA......................................................................................................................................................................................................................................................	29	4	1.00	4	4	0	0	0
.........ATATAGTATAAAAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	5	1.00	5	2	2	1	0
.....................AG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCAT---------------------------------------------------------AAGG..................................................................................................................................................................................................................................................................................................................................................................................	26	5	1.00	5	5	0	0	0
.....................................................................................................................................................................................TTCCAATCAT---------------------------------------------------------AAGGTCTATTAA..........................................................................................................................................................................................................................................................................................................................................................................	22	5	1.00	5	4	0	0	1
..............................................................................................................................................................................................................................................................TATTAACAAATAGTATAGA--------------------------------------------------------------------------------------------------T..........................................................................................................................................................................................................................................................	20	4	1.00	4	1	0	3	0
.................TAAAAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACTTCCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	5	1.00	5	1	1	1	2
......................G------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCAT---------------------------------------------------------......................................................................................................................................................................................................................................................................................................................................................................................	21	5	1.00	5	5	0	0	0
............TAGTATAAAAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	5	1.00	5	1	0	3	1
.........................................................................................................................................................................................................................................................AGGTCTATTAACAAATAGTATAG..............................................................................................................................................................................................................................................................................................................................................................	23	4	1.00	4	2	1	1	0
........................................................................................................................................................................................CAATCAT---------------------------------------------------------AAGGTCTATTAACAA.......................................................................................................................................................................................................................................................................................................................................................................	22	5	1.00	5	2	1	0	2
....................................................................................................................................................................................CTTCCAATCAT---------------------------------------------------------AAGGTCTATTAACAA.......................................................................................................................................................................................................................................................................................................................................................................	26	5	1.00	5	4	0	1	0
...............................................................................................................................................................................................................................................................ATTAACAAATAGTATAGA--------------------------------------------------------------------------------------------------TACC.......................................................................................................................................................................................................................................................	22	4	1.00	4	1	0	2	1
..............GTATAAAAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACTTCCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	5	1.00	5	2	2	0	1
.....TCT-ATATAGTATAAAAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	5	1.00	5	5	0	0	0
...............TATAAAAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACTTCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	5	1.00	5	3	2	0	0
.....................................................................................................................................................................................TTCCAATCAT---------------------------------------------------------AAGGTCTATTAACAAAT.....................................................................................................................................................................................................................................................................................................................................................................	27	5	1.00	5	3	1	1	0
......................G------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACTTCCAATCAT---------------------------------------------------------A.....................................................................................................................................................................................................................................................................................................................................................................................	22	5	1.00	5	0	2	2	1
..............GTATAAAAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	5	1.00	5	0	0	4	1
...........ATAGTATAAAAG------------------------------------TATATT----------------------------------------------------------------------------------------------------------------TGACTTCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	5	0.80	4	3	1	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................ATTTTTTCT--------------------ATTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTATTGCTTT.......................................	26	5	0.80	4	0	1	1	2

droYak3

CAGTCTGG-CCATCAAGAATGCC------------------------------------GAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAAATGCCCCCACGAAGCGAGA------------------------------------------------TCT--------GG	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
...........ATCAAGAATGCC------------------------------------GAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAAAT..............................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0

droEre2

TATAATGG-ATTTTTAGTTTTGTTTTATGAAAATATTTTCTTATTTCTTTATTGTTATT----GTCGTCTTTGACA-----------AATTCTATTTGTCTATTAT-----AGT-------------------------------------------------------AGTTTATTGGTCTTTCCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAGGAAATGTAA------------------------------------TTTTGGTTATCTTAA--------TG	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
.......................................................................................................TAT-----AGT-------------------------------------------------------AGTTTATTGGTCTTTCCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA.........................................................................	26	20	1.25	25	24	0	0	0	0	1	0
.................................TATTTTCTTATTTCTTTATTGTTAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0	0
.......................................................................................................TAT-----AGT-------------------------------------------------------AGTTTATTGGTCTTTCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	20	0.20	4	3	0	0	0	1	0	0
........................................................................................................AT-----AGT-------------------------------------------------------AGTTTATTGGTCTTTCCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA.........................................................................	25	20	0.10	2	2	0	0	0	0	0	0
................................................................................................TGTCTATTAT-----AGT-------------------------------------------------------AGTTTATTGGTCTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	20	0.10	2	2	0	0	0	0	0	0
..............................................................................................TTTGTCTATTAT-----AGT-------------------------------------------------------AGTTTATTGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	20	0.10	2	2	0	0	0	0	0	0
.......................................................................................................................................................................................TCCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAGGAAATGTAA------------------------------------TTTTGGTTA................	27	20	0.05	1	0	0	0	0	0	1	0
.................................................TATTGTTATT----GTCGTCTTTGACA-----------AA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	20	0.05	1	1	0	0	0	0	0	0
.........................................................................................................T-----AGT-------------------------------------------------------AGTTTATTGGTCTTTCCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA.........................................................................	24	20	0.05	1	1	0	0	0	0	0	0
.ATAATGG-ATTTTTAGTTTTGTTTTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	20	0.05	1	1	0	0	0	0	0	0
...............................................................................................................AGT-------------------------------------------------------AGTTTATTGGTCTTTCCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------...........................................................................	21	20	0.05	1	0	0	0	0	1	0	0
................................................................................................TGTCTATTAT-----AGT-------------------------------------------------------AGTTTATTGGTCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	20	0.05	1	1	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGAAATGTAA------------------------------------TTTTGGTA.................	20	20	0.05	1	1	0	0	0	0	0	0
.ATAATGG-ATTTTTAGTTTTGTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	20	0.05	1	1	0	0	0	0	0	0
.............TTAGTTTTGTTTTATGAAAATATT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	20	0.05	1	1	0	0	0	0	0	0
TATAATGG-ATTTTTAGTTTTGTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	20	0.05	1	1	0	0	0	0	0	0
..TAATGG-ATTTTTAGTTTTGTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	20	0.05	1	1	0	0	0	0	0	0
.......................................................................................................TAT-----AGT-------------------------------------------------------AGTTTATTGGTCTTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	20	0.05	1	1	0	0	0	0	0	0
.......................................................................................................TAT-----AGT-------------------------------------------------------AGTTTATTGGTCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	20	0.05	1	0	0	0	0	1	0	0

dvi_7380

scaffold_12875:16951471-16951621 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Repeatable elements

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads