ID:

dvi_7303

 Coordinate:

scaffold_12875:16480247-16480466 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-23.84 -23.74 -23.64

Flybase annnotation

exon [dvir_GLEANR_7520:4]; CDS [Dvir\GJ22216-cds]; exon [dvir_GLEANR_7520:3]; CDS [Dvir\GJ22216-cds]; intron [Dvir\GJ22216-in]

Repeatable elements

NameClassFamilyStrand
(CAAT)nSimple_repeatSimple_repeat+

Sense Strand Reads

##################################################----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TAGCGCGCGACGGAAAAGATAAAAATATGACTAGTTTAGGCATGGGCATGGTAAGTGTCGCCGCAGCTGCGAGTCGCGTCTCTATCTTTCTCTCTCTCTCTCTCAGTCAATCAATCTGTCAATCAATCAATCAATCAGTCACACACACACACCTTGTACTGACCCCGTGCCCGCACACTGTGCTGTCACATTCTCTAGCCCACTATTTGAGCCATTTTTAACATATTGCAATTCTCTTATCCCTTCCCCAAAAACCCAACCCATGTGCAGAACGGCGGTCTGTTGGGCGTGCCCATGGGCTTTCTGGACTTCACACCGGA
**************************************************....(((.((.(((((.((((...((((.........................(((.........)))................(((((.(((...........))))))))...))))..))))..))))).)).)))...(((.............)))..............(((((...................................)))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528803
follicle cells		 M047
female body
 SRR060682
9x140_0-2h_embryos_total
 M061
embryo
 M028
head
 SRR1106720
embryo_8-10h
 V116
male body		 SRR060676
9xArg_ovaries_total
 V053
head
 SRR060678
9x140_testes_total
 V047
embryo
 SRR060657
140_testes_total
 SRR060665
9_females_carcasses_total
.....................................................................................................................................................................................................................................................................................GTCTGTTGGGCGTGCCCATGGGCT................... 24 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................CTTTCGGGACTGCTCACCGGA 21 3 1 2.00 2 0 0 1 0 0 0 1 0 0 0 0 0 0
............................GACTAGTTTAGGCATGGGCATGAAC........................................................................................................................................................................................................................................................................... 25 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................CTAGTTTAGGCATGGGCATGAAC........................................................................................................................................................................................................................................................................... 23 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................CCACTATTCGAGCCATTTTTAACATATTGCAA......................................................................................... 32 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
................................AGTTTAGGCATGGGCATG.............................................................................................................................................................................................................................................................................. 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................CATGGGCTTTCTGGACTTCACACC... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................CACACACACCTTGTACTGACCC........................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................TCTATCAGTCAATCAATCTGTCAATCA................................................................................................................................................................................................... 27 1 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0 0
..........................................GGGGCATGGTTAATGTCGCC.................................................................................................................................................................................................................................................................. 20 3 9 0.22 2 0 0 0 0 0 0 0 0 2 0 0 0 0
.......................................................................................................................................................................................................................................TTCTCGTATTCTTTCCCCAAA.................................................................... 21 3 5 0.20 1 0 0 0 0 0 0 0 0 0 1 0 0 0
..................................ATTAGGCATAGGCTTGGTAA.......................................................................................................................................................................................................................................................................... 20 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 1 0
.....................................................................................................................................................................................................................................................CCCCAAAAACCCACCCAAT........................................................ 19 2 11 0.09 1 0 0 0 0 0 0 0 0 0 0 1 0 0
.............................................................................................................................................................................................................................................................................................................TTCGGGACTGCTCACCGGA 19 3 11 0.09 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................CTTTCTCTGTCTCTCTCGAAGTC.................................................................................................................................................................................................................... 23 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0
.................................................................................CGATCTTTCTCTCTCTCTCTCTC........................................................................................................................................................................................................................ 23 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................ATCAATCAATCAATCAGTCA................................................................................................................................................................................... 20 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1
................................................TTGTAGGTGTCTCCGCAGC............................................................................................................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0

Anti-sense strand reads

ATCGCGCGCTGCCTTTTCTATTTTTATACTGATCAAATCCGTACCCGTACCATTCACAGCGGCGTCGACGCTCAGCGCAGAGATAGAAAGAGAGAGAGAGAGAGTCAGTTAGTTAGACAGTTAGTTAGTTAGTTAGTCAGTGTGTGTGTGTGGAACATGACTGGGGCACGGGCGTGTGACACGACAGTGTAAGAGATCGGGTGATAAACTCGGTAAAAATTGTATAACGTTAAGAGAATAGGGAAGGGGTTTTTGGGTTGGGTACACGTCTTGCCGCCAGACAACCCGCACGGGTACCCGAAAGACCTGAAGTGTGGCCT
**************************************************....(((.((.(((((.((((...((((.........................(((.........)))................(((((.(((...........))))))))...))))..))))..))))).)).)))...(((.............)))..............(((((...................................)))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 V053
head
 SRR060654
160x9_ovaries_total
 M061
embryo
 SRR060662
9x160_0-2h_embryos_total
 SRR060667
160_females_carcasses_total
 V047
embryo
 V116
male body		 SRR060663
160_0-2h_embryos_total
 M028
head
 SRR060676
9xArg_ovaries_total
 SRR1106728
larvae
...............................................................................................................................GGTAGTTAGACAGTGTGTGGGT........................................................................................................................................................................... 22 3 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................CGCGAATAGGGAAGGGAT...................................................................... 18 3 20 0.25 5 0 0 0 0 5 0 0 0 0 0 0 0
.............................................................................................................................................................TAACGGGGGCACGGGCGTG................................................................................................................................................ 19 2 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................GGAGGGGGTTCTTGGGTT............................................................. 18 2 8 0.25 2 1 0 0 0 0 0 1 0 0 0 0 0
.................................................................................................................................................................................................................................................TGAGGGGGTTTTTGGGTT............................................................. 18 2 17 0.24 4 4 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................GTATGTGAGGAACATGACGG............................................................................................................................................................. 20 3 5 0.20 1 0 0 0 0 0 0 0 1 0 0 0 0
..........................................ACCCGGACCATTCAAAGGGGC................................................................................................................................................................................................................................................................. 21 3 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................CAGAAAGACCGGAAGTGT..... 18 2 7 0.14 1 0 0 0 0 0 0 0 0 1 0 0 0
...........................................................................................................................................................................................................................TGGTATTACGTTAAGAGAATT................................................................................ 21 3 8 0.13 1 0 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................................CTGGTATTACGTTAAGAGAA.................................................................................. 20 3 17 0.12 2 0 0 0 0 0 2 0 0 0 0 0 0
..................................................................................................................................................................................................................................................GAAGGGGGTCTTGGGTT............................................................. 17 2 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................GAGGGGGGTCTTGGGTTGGGT......................................................... 21 3 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................GAAAATTGTATAGCGATAAG...................................................................................... 20 3 14 0.07 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................GCGACTTCGACGCTCAGCTC.................................................................................................................................................................................................................................................. 20 3 17 0.06 1 0 0 0 0 0 0 1 0 0 0 0 0
.....................................................................................................................CAGTTAGTTAGTTAGTTAGT....................................................................................................................................................................................... 20 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0
.........................................................................................................................TAGTTAGTTAGTTAG........................................................................................................................................................................................ 15 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1
.......................................................................................................................GTTAGTTAGTTAGTTAGT....................................................................................................................................................................................... 18 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................GAATAGGGAAGGGGATGGT.................................................................. 19 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................GTGAGGGGGTTCTTGGGTT............................................................. 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................CAGTTAGTTAGTTAGTTAG........................................................................................................................................................................................ 19 0 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0
................................................................................................................................................................................................................................................AGGATGGGGTTCTTGGGTT............................................................. 19 3 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12875:16480197-16480516 + dvi_7303 TAGCGCGCGACGGAAAAGATA---AAAATATGACTAGTTTAGGCATGGGCATGGTAAGTGTCGCCGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCT----G-------------------------------------------------------------------------------CGAGTCGCGTCTCTATCTTTCTCTCTC-TCT--CTCTCAGT-C---------------------------AATCAAT-----------CTGTCAATC-------AA-------------------------------------------------------------------------TCA--------------ATCAATCAGT------CACACACACACACCTTGTACTGACC------CCGTGCCCGCACACTGTGCTGTCACATTCTCTAGCC-C----------------------------------------------------------------------------------------ACTA--TTTGAGCCATT-TTTAA-------C--------ATATTGCAAT------TCTCT-----------TATC-------CC------------------TTCC----------CC-A-----AAAAC-----CC----AACC--------CA--------TGT--GCAGAACGGCGGTCTGTTGGGCGTGCCCATGGGCTTTCTGGACTTCACACCGGA
droMoj3 scaffold_6496:7278050-7278480 - dmo_1018 TAGCGCGCGACGGAAAAGATA---AAAATATGACTAGTTTAGGCATGGGCATGGTAAGTGTCGCCGCAGCGCGTACAAAGCTGCGTGCCGCGTCGCGTCCCCCCCCCCCCCTCTCTCTCTCTCTCTGTCTCTTTGTATTTGTCTCAGTCTCAATTCAAATGAACAATCAATCAAACAATCAGTTAATCAATCACTCACTCAATCAGACTCAATGACCCACATAGAGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---CTC------------TCGTGTTGCTC--------------------------------------------------------------------------------------------------------------TAT-------------CTCACACACACACACACACACACACACACC-CAAAT-----CATATA--TTTTGC--------------------------------------------------------GAGCTTTGTTTTAA-------C--------ATATATTATC----------TCTTCTCCTCCTACTCCTATTACCCTCCCTCACTTGCTCAC--TTGC-----------T-C-----AAC-----------------TTCCTACCCA--------TCT--GCAGAACGGCGGTCTGTTGGGCGTGCCCATGGGCTTTCTGGACTTCACACCGGA
droGri2 scaffold_15245:5329828-5330241 + TAGCGCGCGACGGAAAAGATA---AAAATATGACTAGTTTAGGCATGGGCATGGTAAGTGTCGCCACAGCGAATCCCAAGCACTGTGTCGCGTC-------------------TCTCTCT-------------------------------------------------------CACTCACTCACTCACTCACTTACTCACTCGCACATACTGACATACACACAACACACACACACAACACACACACACACACAACATACACACAGAAACACACACACTACTCTCTGTGTGGTGGTG--------------------------T-GGTG-----------------------TCAGTGAGTCGT--CTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTCTCTCTTTC----AATCTCTGCTGCACATCATCATTGAGCTATG-TCTAA-------C--------ATATAATATACCCTCCTCTCT-----------CTTC-------AC--------TTCCTC--TCCCCCTCTCCTGTGGCC-A-----AAAAAATAA-TT----GG----------CA--------ATT--GCAGAACGGCGGTCTGTTGGGCGTGCCCATGGGCTTTCTGGACTTTACACCGGA
droWil2 scf2_1100000004909:2561710-2561894 - GTT---------------------------------------------------------T--TTC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTCT---------------------------C-----------------------------------------------------------------------------TC-TCT--CTCTTGTT-T---------------------------TTTTAAC-----------TCGTCTCTC-------AG-------------------------------------------------------------------------TCGTGCCTCAAAATGCAAATGCA------------------------------CTTACACACCCACACACCTACA-------------CTTACACACACACA--------------------------------------------------------------------CA------------------CACA--CACACACTACA-TTACACTCCTGATTGATGCAACTGCT------------------------------------------------------------------------------------------------------------------------------------------------GCAGTTCTCTAATCTTAACCCTCCTCCCCAAAAA
dp5 3:16119906-16120211 - TAGCGCGCGACGGAAAAGATACAAAAAATATGACTAGTTTAGGCATGGGCATGGTAAGTGT--G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCG-CC-GTC--------------TCACTCT-----TCAGCCTCTCCTGCACCCCAGGAAAC----------------------------TGGGA----------------------------------------------------------------------------------------------------------------------------------------------------------------GGGCGCGACCCCCATTA--------------GGCAATAGGCAACCGTA---ACCCCCAGTCCTGTCCAGACCATTTCCCCCCGCCTGCA-------------CTTTCCCCCGCATC----------------------------------------------------------------------------------------CATA--TCGAGGCTAAT-CTTGTCTTCTGT----------------------------TT-----------TGTT-------CT------------------TTGT----------AT-A-----CGAAT-----CT----CGAT--------CG--------CAC--GCAGAACGGAGGCCTGCTAGGCGTGCCCATGGGATTCCTGGACTTCACACCCGA
droPer2 scaffold_4:644713-645018 + TAGCGCGCGACGGAAAAGATACAAAAAATATGACTAGTTTAGGCATGGGCATGGTAAGTGT--G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCG-CC-GTC--------------TCACTCT-----TCAGCCTCTCCTGCACCCCAGGAAAC----------------------------TGGGA----------------------------------------------------------------------------------------------------------------------------------------------------------------GGGCGCGACCCCCATTA--------------GGCAATAGGCAACCGTA---ACCCCCAGTCCTGTCCAGACCATTTCCCCCCGCCTGCA-------------CTTTCCCCCGCATC----------------------------------------------------------------------------------------CATA--TCGAGGCTAAT-TTTGTCTTCTGT----------------------------TT-----------TGTT-------CT------------------TTGT----------AT-A-----CGAAT-----CT----CGAT--------CG--------CAC--GCAGAACGGAGGCCTGCTAGGCGTGCCCATGGGATTCCTGGACTTCACACCCGA
droAna3 scaffold_13266:17993177-17993475 + TAGCGCGCGACGGAAAAGATACAAAAAATATGACTAGTTTAGGCATGGGCATGGTAAGTTG--ACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGTTAGTTGGATACGAAAAAA-------ATT---T---------------------CAAT----------------------------CGAGAGGGGTTGGCATCCATACCTAGTA-CT--CTCTCAGT-T--AG----TT------------------------AGTCTTCAGACTAGTCTATACCTAATC----CCCGTTTATC-----GGG--GA---------TC-------------------------------------------------------------------------------------------------------------------------------------------------------------------AC-----TAATCACTTGCTAACCAAACA-TT-CC-GCT-TCTCTCTC----CC---------------------------------------------------------------------------------------------------------------------------------C-T-----CGAAA------T----GCA-TTTCTATCCG--------GCT--GCAGAACGGCGGCCTGTTGGGCGTGTCCATGGGATTCCTGGACTTCACACCCGA
droBip1 scf7180000396735:1246591-1246868 + TAGCGCGCGACGGAAAAGATACAAAAAATATGACTAGTTTAGGCATGGGCATGGTAAGTTG--GCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGTTAGTTGGATGCGAGAGCATCATA------------------------------------------------T--CCCA--------------------------------GTTACT--CTCTCAGT-T--AGTTAATC------------------------AGAG-----ACCT----------CATC----CC-----------------------------TCCTCCC---CCCTATGTGGGGGGGAGGGCT--------------------------------------------------------------------------------------------------------------------------------CTAATCA------------CTTGCTAACCAAACA-TT-CCGCTTCTCTCTTT------C---------------------------------------------------------------------------------------------------------------------------------C-T-----TGAAA------T----GCA-TTTCCATCCG--------TCT--GCAGAACGGCGGCCTGTTGGGCGTGTCCATGGGATTCCTGGACTTCACACCCGA
droKik1 scf7180000302406:226378-226655 + TAGCGCGCGACGGAAAAGATACAAAAAATATGACTAGTTTAGGCATGGGCATGGTAAGTTG--GTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGTTAGTTAGTT--------------------------TTGGT------------------------TTAGTTAGCAG-CTCTCAGCAGCTGCCAGCAG-----------------------------------------------CCCCTCTCCTCCGGAGGATCAAT-----------CTG-----------------ACAG---ATC------------TCGAGTAGATC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA---ATTTGCTAACCCGATA-TTTCC-TATCTATCTCTCTCCTCA---------------------------------------------------------------------------------------------------------------------------------C-T---ATCGAAT-----CTACCTCGAT--------TG--------CATGCGCAGAACGGCGGCCTGTTGGGCGTGCCCATGGGATTCCTGGACTTTACACCCGA
droFic1 scf7180000454066:1189524-1189800 - TAGCGCGCGACGGAAAAGATACAAAAAATATGACTAGTTTAGGCATGGGCATGGTAAGTTG--GTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGCTAGTT--------------TATATCT-----TTGGTTTTTTA-------------ATTAGTTAGTTAGCATA--CTCA--------------------------------GCA-AT--C------T-T--AG----TC------------------------AGAG-----ATG-----------GAA--------------A-----A----AA---------TCTCTTCTTT-A---------------GGCA-------------------------------------------------------------------------------------------------------------------------------T--ACTAAA--CATTA---TCTTGCTATACTAACA-TT-TCGAATCTGTCTCTCTT--CA---------------------------------------------------------------------------------------------------------------------------------T-C-----TGAAT--TCTCT----GGAT--------TG--------CCT--GCAGAACGGCGGCCTGTTGGGCGTGCCCATGGGTTTCCTGGACTTCACACCCGA
droEle1 scf7180000491349:960613-960879 - TAGCGCGCGACGGAAAAGATACAAAAAATATGACTAGTTTAGGCATGGGCATGGTAAGTTG--G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCTAGTT--------------------------T-GGTT-----------------------TTAGTTAGCA----CACA--------------------------------GCA-TTCACTCTCAGT-T--AG----CC------------------------AGAG-----ATC-----------GATC----GTCG---ATC-----AGGTCGA---------TCTCCTC----A---------------GGCA-------------------------------------------------------------------------------------------------------------------------------T--AATGAA--CACTA---GTTTGCTAACCTCTCA-TT-CC-TATCTCTCTCTC----CA---------------------------------------------------------------------------------------------------------------------------------CCC-----CGAAT-----CT----GGAT--------TG--------CAT--GCAGAACGGCGGCCTGTTGGGCGTGCCCATGGGCTTCCTGGACTTCACACCCGA
droRho1 scf7180000779999:262575-262837 - TAGCGCGCGACGGAAAAGATACAAAAAATATGACTAGTTTAGGCATGGGCATGGTAAGTTG--G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCTAGTT---------------------------TGGT------------------------TTAGTTAGCA----CACA--------------------------------GCA-TT--CTCTCAGT-T--AG----CC------------------------AGAG-----ATC-----------GATC----GCAG---ATC-----AGATCGA---------TCTTCCC----C---------------GGCA-------------------------------------------------------------------------------------------------------------------------------T--AATGAA--CCCTA---TTTTGCTAACCTGTCA-TT-CC-TATCTCTCTCTC----CA---------------------------------------------------------------------------------------------------------------------------------C-C-----CGAAT-----CT----GGAT--------TC--------CAT--GCAGAACGGCGGCCTGTTGGGCGTGCCCATGGGATTCCTGGACTTCACACCCGA
droBia1 scf7180000301506:202560-202845 + TAGCGCGCGACGGAAAAGATACAAAAAATATGACTAGTTTAGGCATGGGCATGGTAAGTTG--G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCTAGTT--------------T-----T-----TTGGT------------------------TTAGTTAGCATT--GTCC--------------------------------ACA-CT--CTCTCAGT-T--CG----CCA-----------------------AGAG-----ATCTATC-------GATCTATTGCCG---ATCGCATAG----GA---------TCTCCAC----G---------------GGGA-------------------------------------------------------------------------------------------------------------------------------T--ATTGAA--CATTAT--TTTTGCTAACCTGACA-TT-CC-TATCTCTCTCTCCC--CA---------------------------------------------------------------------------------------------------------------------------------CCCACTA-AAAAT-----CT----GGAT--------TG--------CCT--GCAGAACGGCGGCCTGTTGGGCGTGCCCATGGGATTCCTGGACTTCACACCCGA
droTak1 scf7180000415877:329312-329392 - T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTC----CA---------------------------------------------------------------------------------------------------------------------------------CCC-----CGAAT-----CT----GGAT--------TG--------CCT--GCAGAACGGCGGCCTGTTGGGCGTGCCCATGGGATTCCTGGACTTCACACCCGA
droEug1 scf7180000409672:4516703-4516992 - TAGCGCGCGACGGAAAAGATACAAAAAATATGACTAGTTTAGGCATGGGCATGGTAAGTTG--GTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGCTAGTT--------------TCTTACTTTTTGTTGGTT-----------------------TTAGTTAGTATTCTCTCA--------------------------------GCA-TT--CACTAAGTTTAG---------CCCCT------------------CGAG-----ATCT-------------------CA------T-----G----GA---------TCTCAAT----A---------------GGCA-------------------------------------------------------------------------------------------------------------------------------T--TGCGAACACATTAA--TTTTGCTAACCTAAAA-TT-CG-TATCTTTCTCTC----CAT--------------------------------------------------------------------------------------------------------------------------------CCC-----CGAAT--TA-TT----GGAT--------TGTCTTGCCGCAT--ACAGAACGGCGGCCTGTTGGGCGTGCCCATGGGATTCCTGGACTTCACACCCGA
dm3 chr2R:6498968-6499234 + TAGCGCGCGACGGAAAAGATACAAAAAATATGACTAGTTTAGGCATGGGCATGGTAAGTTG--G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCTAGTT--------------------------TTGGT------------------------TTAGTTAGCAA-ATCACA--------------------------------GCAAAT--CTCTCAGT-T--AG----CC------------------------AGAG-----ATC-----------GATC----CCAG---ATC-----G----GA---------TCTCCAC----A---------------GGCC--------------------------------------------------------------------------------------------------------------------------------CGAATGAA--TATTAA--CTTTGCTAACCTTACAATT-CC-TATCTCTCTCTC----CA---------------------------------------------------------------------------------------------------------------------------------C-C-----CGAAT-----CT----GGTT--------TG--------CAT--GCAGAACGGCGGCCTGTTGGGCGTGCCCATGGGATTCCTGGACTTCACACCCGA
droSim2 2r:7258961-7259224 + TAGCGCGCGACGGAAAAGATACAAAAAATATGACTAGTTTAGGCATGGGCATGGTAAGTTG--G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCTAGTT--------------------------TTGGT------------------------TTAGTTAGCATT--CTCA--------------------------------GCAAAT--CTCTCAGT-T--AG----CC------------------------AGAG-----ATC-----------GATC----CCAG---ATC-----G----GA---------TCTCCCC----A---------------GGCC--------------------------------------------------------------------------------------------------------------------------------CGAATGAA--TATTA---CTTTGCTAACCTGACA-TT-CC-TATCTCTCTCTC----CA---------------------------------------------------------------------------------------------------------------------------------C-C-----CGAAT-----CT----GGAT--------TG--------CCT--GCAGAACGGCGGCCTGTTGGGCGTGCCCATGGGATTCCTGGACTTCACACCCGA
droSec2 scaffold_1:4101242-4101505 + TAGCGCGCGACGGAAAAGATACAAAAAATATGACTAGTTTAGGCATGGGCATGGTAAGTTG--G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCTAGTT--------------------------TTGGT------------------------TTAGTTAGCATT--CTCA--------------------------------GCAAAT--CTCTCAGT-T--AG----CC------------------------AGAG-----ATC-----------GATC----CCAG---ATC-----G----GA---------TCTCCCC----A---------------GGCC--------------------------------------------------------------------------------------------------------------------------------CGAATAAA--TATTA---CTTTGCTAACCTGACA-TT-CC-TATCTCTCTCTC----CA---------------------------------------------------------------------------------------------------------------------------------C-C-----TGAAT-----CT----GGAT--------TG--------CCT--GCAGAACGGCGGCCTGTTGGGCGTGCCCATGGGATTCCTGGACTTCACACCCGA
droYak3 2R:2647607-2647868 - TAGCGCGCGACGGAAAAGATACAAAAAATATGACTAGTTTAGGCATGGGCATGGTAAGTTG--G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCTAGTT--------------------------TTGGT------------------------TTAGTTAGCATT--CTCA--------------------------------GCA-AT--CTCTCAGT-T--AG----CC------------------------AGAG-----ATC-----------GATC----CCAG---ATC-----G----GA---------TCTCCCC----A---------------AGCC--------------------------------------------------------------------------------------------------------------------------------C-AATGAA--TCTTA---CTTTGCTAACCTGACA-TT-CC-TATCTCTCTCTC----CA---------------------------------------------------------------------------------------------------------------------------------C-C-----CGAAT-----CT----GGAT--------TG--------CAT--GCAGAACGGCGGCCTGTTGGGCGTGCCCATGGGATTCCTGGACTTCACACCCGA
droEre2 scaffold_4845:19258494-19258756 - TAGCGCGCGACGGAAAAGATACAAAAAATATGACTAGTTTAGGCATGGGCATGGTAAGTTG--GTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGCTAGTT--------------------------TTGGT------------------------TTAGTTAGCATT--CTCA--------------------------------GCA-AA--CGCTCAGT-T--AG----CC------------------------AGAG-----ATC-----------GATC----CCAG---ATC-----G----GA---------TCTCCCC----A---------------AGCC--------------------------------------------------------------------------------------------------------------------------------C-AACGAA--TATTA---CATTGCTAACCTGACA-TT-CC-TATCTCTCTCTC----CA---------------------------------------------------------------------------------------------------------------------------------C-C-----CGAAA-----CT----GGAT--------TG--------CAT--GCAGAACGGCGGCCTGTTGGGCGTGCCCATGGGATTCCTGGACTTCACACCCGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TAGCGCGCGACGGAAAAGATA---AAAATATGACTAGTTTAGGCATGGGCATGGTAAGTGTCGCCGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCT----G-------------------------------------------------------------------------------CGAGTCGCGTCTCTATCTTTCTCTCTC-TCT--CTCTCAGT-C---------------------------AATCAAT-----------CTGTCAATC-------AA-------------------------------------------------------------------------TCA--------------ATCAATCAGT------CACACACACACACCTTGTACTGACC------CCGTGCCCGCACACTGTGCTGTCACATTCTCTAGCC-C----------------------------------------------------------------------------------------ACTA--TTTGAGCCATT-TTTAA-------C--------ATATTGCAAT------TCTCT-----------TATC-------CC------------------TTCC----------CC-A-----AAAAC-----CC----AACC--------CA--------TGT--GCAGAACGGCGGTCTGTTGGGCGTGCCCATGGGCTTTCTGGACTTCACACCGGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGTTGGGCGTGCCCATGGGCT...................2413.003000000000000000000000000000000000000000000000000000000000000003
...............................GACTAGTTTAGGCATGGGCATGAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
.................................CTAGTTTAGGCATGGGCATGAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
...................................AGTTTAGGCATGGGCATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGGCTTTCTGGACTTCACACC...2411.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACACACACCTTGTACTGACC------C...........................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATC-------AA-------------------------------------------------------------------------TCA--------------ATCAATCAGT------CA.........................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000100000000000000000000000000000000000000000000000
droMoj3
TAGCGCGCGACGGAAAAGATA---AAAATATGACTAGTTTAGGCATGGGCATGGTAAGTGTCGCCGCAGCGCGTACAAAGCTGCGTGCCGCGTCGCGTCCCCCCCCCCCCCTCTCTCTCTCTCTCTGTCTCTTTGTATTTGTCTCAGTCTCAATTCAAATGAACAATCAATCAAACAATCAGTTAATCAATCACTCACTCAATCAGACTCAATGACCCACATAGAGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---CTC------------TCGTGTTGCTC--------------------------------------------------------------------------------------------------------------TAT-------------CTCACACACACACACACACACACACACACC-CAAAT-----CATATA--TTTTGC--------------------------------------------------------GAGCTTTGTTTTAA-------C--------ATATATTATC----------TCTTCTCCTCCTACTCCTATTACCCTCCCTCACTTGCTCAC--TTGC-----------T-C-----AAC-----------------TTCCTACCCA--------TCT--GCAGAACGGCGGTCTGTTGGGCGTGCCCATGGGCTTTCTGGACTTCACACCGGASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................AATATGACTAGTTTAGGCATGGGCATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
............................................................................................................................................................................................................................ATAGAGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---CTC------------TCGTGTTGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
............................TATGACTAGTTTAGGCATGGGCATGAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACACACACACACACC-CAAA.................................................................................................................................................................................................................................................................................................20200.051100000
droGri2
TAGCGCGCGACGGAAAAGATA---AAAATATGACTAGTTTAGGCATGGGCATGGTAAGTGTCGCCACAGCGAATCCCAAGCACTGTGTCGCGTC-------------------TCTCTCT-------------------------------------------------------CACTCACTCACTCACTCACTTACTCACTCGCACATACTGACATACACACAACACACACACACAACACACACACACACACAACATACACACAGAAACACACACACTACTCTCTGTGTGGTGGTG--------------------------T-GGTG-----------------------TCAGTGAGTCGT--CTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTCTCTCTTTC----AATCTCTGCTGCACATCATCATTGAGCTATG-TCTAA-------C--------ATATAATATACCCTCCTCTCT-----------CTTC-------AC--------TTCCTC--TCCCCCTCTCCTGTGGCC-A-----AAAAAATAA-TT----GG----------CA--------ATT--GCAGAACGGCGGTCTGTTGGGCGTGCCCATGGGCTTTCTGGACTTTACACCGGASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGAACGGCGGTCTGTTGGGC................................2211.00101
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGGGCGTGCCCATGGGC....................2011.00110
droWil2
GTT---------------------------------------------------------T--TTC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTCT---------------------------C-----------------------------------------------------------------------------TC-TCT--CTCTTGTT-T---------------------------TTTTAAC-----------TCGTCTCTC-------AG-------------------------------------------------------------------------TCGTGCCTCAAAATGCAAATGCA------------------------------CTTACACACCCACACACCTACA-------------CTTACACACACACA--------------------------------------------------------------------CA------------------CACA--CACACACTACA-TTACACTCCTGATTGATGCAACTGCT------------------------------------------------------------------------------------------------------------------------------------------------GCAGTTCTCTAATCTTAACCCTCCTCCCCAAAAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCCTGATTGATGCAACTGCT------------------------------------------------------------------------------------------------------------------------------------------------GCAGT.............................2711.00101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTC-------AG-------------------------------------------------------------------------TCGTGCCTCAAAATGCAA..........................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
dp5
TAGCGCGCGACGGAAAAGATACAAAAAATATGACTAGTTTAGGCATGGGCATGGTAAGTGT--G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCG-CC-GTC--------------TCACTCT-----TCAGCCTCTCCTGCACCCCAGGAAAC----------------------------TGGGA----------------------------------------------------------------------------------------------------------------------------------------------------------------GGGCGCGACCCCCATTA--------------GGCAATAGGCAACCGTA---ACCCCCAGTCCTGTCCAGACCATTTCCCCCCGCCTGCA-------------CTTTCCCCCGCATC----------------------------------------------------------------------------------------CATA--TCGAGGCTAAT-CTTGTCTTCTGT----------------------------TT-----------TGTT-------CT------------------TTGT----------AT-A-----CGAAT-----CT----CGAT--------CG--------CAC--GCAGAACGGAGGCCTGCTAGGCGTGCCCATGGGATTCCTGGACTTCACACCCGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................ATGACTAGTTTAGGCATGGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100000
droPer2
TAGCGCGCGACGGAAAAGATACAAAAAATATGACTAGTTTAGGCATGGGCATGGTAAGTGT--G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCG-CC-GTC--------------TCACTCT-----TCAGCCTCTCCTGCACCCCAGGAAAC----------------------------TGGGA----------------------------------------------------------------------------------------------------------------------------------------------------------------GGGCGCGACCCCCATTA--------------GGCAATAGGCAACCGTA---ACCCCCAGTCCTGTCCAGACCATTTCCCCCCGCCTGCA-------------CTTTCCCCCGCATC----------------------------------------------------------------------------------------CATA--TCGAGGCTAAT-TTTGTCTTCTGT----------------------------TT-----------TGTT-------CT------------------TTGT----------AT-A-----CGAAT-----CT----CGAT--------CG--------CAC--GCAGAACGGAGGCCTGCTAGGCGTGCCCATGGGATTCCTGGACTTCACACCCGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................ACTAGTTTAGGCATGGGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000
................................ACTAGTTTAGGCATGGGCATGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
....................................GTTTAGGCATGGGCATGAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20100.101000001
droAna3
TAGCGCGCGACGGAAAAGATACAAAAAATATGACTAGTTTAGGCATGGGCATGGTAAGTTG--ACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGTTAGTTGGATACGAAAAAA-------ATT---T---------------------CAAT----------------------------CGAGAGGGGTTGGCATCCATACCTAGTA-CT--CTCTCAGT-T--AG----TT------------------------AGTCTTCAGACTAGTCTATACCTAATC----CCCGTTTATC-----GGG--GA---------TC-------------------------------------------------------------------------------------------------------------------------------------------------------------------AC-----TAATCACTTGCTAACCAAACA-TT-CC-GCT-TCTCTCTC----CC---------------------------------------------------------------------------------------------------------------------------------C-T-----CGAAA------T----GCA-TTTCTATCCG--------GCT--GCAGAACGGCGGCCTGTTGGGCGTGTCCATGGGATTCCTGGACTTCACACCCGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCG--------GCT--GCAGAACGGC............................................1811.001010000
....GCGCGACGGAAAAGATACAAAAAATAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
.....................................................GTAAGTTG--ACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGTTAGTTGGATA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGCGGCCTGTTGGGCG...............................1911.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAA------T----GCA-TTTCTATCCG--------GCT--GCAG..................................................2511.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGATTCCTGGACTTCACAC....2211.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCGTGTCCATGGGATTCCC...............2111.001010000
.................................CTAGTTTAGGCATGGGCATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................GTTGGCATCCATACCTAGTA-CT--CTCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
.....................................TTTAGGCATGGGCATGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1890.111010000
droBip1
TAGCGCGCGACGGAAAAGATACAAAAAATATGACTAGTTTAGGCATGGGCATGGTAAGTTG--GCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGTTAGTTGGATGCGAGAGCATCATA------------------------------------------------T--CCCA--------------------------------GTTACT--CTCTCAGT-T--AGTTAATC------------------------AGAG-----ACCT----------CATC----CC-----------------------------TCCTCCC---CCCTATGTGGGGGGGAGGGCT--------------------------------------------------------------------------------------------------------------------------------CTAATCA------------CTTGCTAACCAAACA-TT-CCGCTTCTCTCTTT------C---------------------------------------------------------------------------------------------------------------------------------C-T-----TGAAA------T----GCA-TTTCCATCCG--------TCT--GCAGAACGGCGGCCTGTTGGGCGTGTCCATGGGATTCCTGGACTTCACACCCGASizeHit CountTotal NormTotal
No Reads
droKik1
TAGCGCGCGACGGAAAAGATACAAAAAATATGACTAGTTTAGGCATGGGCATGGTAAGTTG--GTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGTTAGTTAGTT--------------------------TTGGT------------------------TTAGTTAGCAG-CTCTCAGCAGCTGCCAGCAG-----------------------------------------------CCCCTCTCCTCCGGAGGATCAAT-----------CTG-----------------ACAG---ATC------------TCGAGTAGATC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA---ATTTGCTAACCCGATA-TTTCC-TATCTATCTCTCTCCTCA---------------------------------------------------------------------------------------------------------------------------------C-T---ATCGAAT-----CTACCTCGAT--------TG--------CATGCGCAGAACGGCGGCCTGTTGGGCGTGCCCATGGGATTCCTGGACTTTACACCCGASizeHit CountTotal NormTotal
No Reads
droFic1
TAGCGCGCGACGGAAAAGATACAAAAAATATGACTAGTTTAGGCATGGGCATGGTAAGTTG--GTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGCTAGTT--------------TATATCT-----TTGGTTTTTTA-------------ATTAGTTAGTTAGCATA--CTCA--------------------------------GCA-AT--C------T-T--AG----TC------------------------AGAG-----ATG-----------GAA--------------A-----A----AA---------TCTCTTCTTT-A---------------GGCA-------------------------------------------------------------------------------------------------------------------------------T--ACTAAA--CATTA---TCTTGCTATACTAACA-TT-TCGAATCTGTCTCTCTT--CA---------------------------------------------------------------------------------------------------------------------------------T-C-----TGAAT--TCTCT----GGAT--------TG--------CCT--GCAGAACGGCGGCCTGTTGGGCGTGCCCATGGGTTTCCTGGACTTCACACCCGASizeHit CountTotal NormTotal
No Reads
droEle1
TAGCGCGCGACGGAAAAGATACAAAAAATATGACTAGTTTAGGCATGGGCATGGTAAGTTG--G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCTAGTT--------------------------T-GGTT-----------------------TTAGTTAGCA----CACA--------------------------------GCA-TTCACTCTCAGT-T--AG----CC------------------------AGAG-----ATC-----------GATC----GTCG---ATC-----AGGTCGA---------TCTCCTC----A---------------GGCA-------------------------------------------------------------------------------------------------------------------------------T--AATGAA--CACTA---GTTTGCTAACCTCTCA-TT-CC-TATCTCTCTCTC----CA---------------------------------------------------------------------------------------------------------------------------------CCC-----CGAAT-----CT----GGAT--------TG--------CAT--GCAGAACGGCGGCCTGTTGGGCGTGCCCATGGGCTTCCTGGACTTCACACCCGASizeHit CountTotal NormTotal
No Reads
droRho1
TAGCGCGCGACGGAAAAGATACAAAAAATATGACTAGTTTAGGCATGGGCATGGTAAGTTG--G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCTAGTT---------------------------TGGT------------------------TTAGTTAGCA----CACA--------------------------------GCA-TT--CTCTCAGT-T--AG----CC------------------------AGAG-----ATC-----------GATC----GCAG---ATC-----AGATCGA---------TCTTCCC----C---------------GGCA-------------------------------------------------------------------------------------------------------------------------------T--AATGAA--CCCTA---TTTTGCTAACCTGTCA-TT-CC-TATCTCTCTCTC----CA---------------------------------------------------------------------------------------------------------------------------------C-C-----CGAAT-----CT----GGAT--------TC--------CAT--GCAGAACGGCGGCCTGTTGGGCGTGCCCATGGGATTCCTGGACTTCACACCCGASizeHit CountTotal NormTotal
No Reads
droBia1
TAGCGCGCGACGGAAAAGATACAAAAAATATGACTAGTTTAGGCATGGGCATGGTAAGTTG--G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCTAGTT--------------T-----T-----TTGGT------------------------TTAGTTAGCATT--GTCC--------------------------------ACA-CT--CTCTCAGT-T--CG----CCA-----------------------AGAG-----ATCTATC-------GATCTATTGCCG---ATCGCATAG----GA---------TCTCCAC----G---------------GGGA-------------------------------------------------------------------------------------------------------------------------------T--ATTGAA--CATTAT--TTTTGCTAACCTGACA-TT-CC-TATCTCTCTCTCCC--CA---------------------------------------------------------------------------------------------------------------------------------CCCACTA-AAAAT-----CT----GGAT--------TG--------CCT--GCAGAACGGCGGCCTGTTGGGCGTGCCCATGGGATTCCTGGACTTCACACCCGASizeHit CountTotal NormTotal
No Reads
droTak1
T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTC----CA---------------------------------------------------------------------------------------------------------------------------------CCC-----CGAAT-----CT----GGAT--------TG--------CCT--GCAGAACGGCGGCCTGTTGGGCGTGCCCATGGGATTCCTGGACTTCACACCCGASizeHit CountTotal NormTotal
No Reads
droEug1
TAGCGCGCGACGGAAAAGATACAAAAAATATGACTAGTTTAGGCATGGGCATGGTAAGTTG--GTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGCTAGTT--------------TCTTACTTTTTGTTGGTT-----------------------TTAGTTAGTATTCTCTCA--------------------------------GCA-TT--CACTAAGTTTAG---------CCCCT------------------CGAG-----ATCT-------------------CA------T-----G----GA---------TCTCAAT----A---------------GGCA-------------------------------------------------------------------------------------------------------------------------------T--TGCGAACACATTAA--TTTTGCTAACCTAAAA-TT-CG-TATCTTTCTCTC----CAT--------------------------------------------------------------------------------------------------------------------------------CCC-----CGAAT--TA-TT----GGAT--------TGTCTTGCCGCAT--ACAGAACGGCGGCCTGTTGGGCGTGCCCATGGGATTCCTGGACTTCACACCCGASizeHit CountTotal NormTotal
No Reads
dm3
TAGCGCGCGACGGAAAAGATACAAAAAATATGACTAGTTTAGGCATGGGCATGGTAAGTTG--G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCTAGTT--------------------------TTGGT------------------------TTAGTTAGCAA-ATCACA--------------------------------GCAAAT--CTCTCAGT-T--AG----CC------------------------AGAG-----ATC-----------GATC----CCAG---ATC-----G----GA---------TCTCCAC----A---------------GGCC--------------------------------------------------------------------------------------------------------------------------------CGAATGAA--TATTAA--CTTTGCTAACCTTACAATT-CC-TATCTCTCTCTC----CA---------------------------------------------------------------------------------------------------------------------------------C-C-----CGAAT-----CT----GGTT--------TG--------CAT--GCAGAACGGCGGCCTGTTGGGCGTGCCCATGGGATTCCTGGACTTCACACCCGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................................AGTTTAGGCATGGGCATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18119.00190000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012100000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000010000000000000000000000010010001000200100000000100000000000000000002120000
.AGCGCGCGACGGAAAAGATACAAAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................AATATGACTAGTTTAGGCATGGGCATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2715.0050000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000001000000000000100000
..................................TAGTTTAGGCATGGGCATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1915.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000100000000000000010010
.................................CTAGTTTAGGCATGGGCATGAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGGCGTGCCCATGGGATTCCTGG.............2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000000000000000000000100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGTGCCCATGGGATTCCT...............2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
.....................................................GTAAGTTG--G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCTAGTT--------------------------TTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGGCGTGCCCATGGGATTCCTGGACTTC........3012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTGCCCATGGGATTCCTGGA............2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGCGTGCCCATGGGATTCCTGG.............2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCTGTTGGGCGTGCCCATG.......................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-----G----GA---------TCTCCAC----A---------------GGCC--------------------------------------------------------------------------------------------------------------------------------CGAAT................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......GCGACGGAAAAGATACAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
............................TATGACTAGTTTAGGCATGGGCATGAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGGCCTGTTGGGCGTGC............................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGCGGCCTGTTGGGCGTGC............................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000100000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGCGGCCTGTTGGGCGTGCC...........................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------------------------------------------------------------------------------------------------------------------C-C-----CGAAT-----CT----GGTT--------TG--------CAT--GCAG..................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGGGCGTGCCCATGGGATTCCT...............2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---------------------------------------------------------------------------------------------------------------------------------C-C-----CGAAT-----CT----GGTT--------TG--------CAT--GC....................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTGCCCATGGGATTCCTGGAC...........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................T--AG----CC------------------------AGAG-----ATC-----------GATC----CCAG---ATC-----G----GA---------TC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTGTTGGGCGTGCCCATGG......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGGGCGTGCCCATGGGATTCC................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGGGCGTGCCCATGGGATTCCTG..............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................AAATATGACTAGTTTAGGCATGGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................CC------------------------AGAG-----ATC-----------GATC----CCAG---AT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
..............................TGACTAGTTTAGGCATGGGCATGAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG-----ATC-----------GATC----CCAG---ATC-----G----GA---------T...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGGCGTGCCCATGGGATTCCTGGAC...........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................ATGACTAGTTTAGGCATGGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGGCGTGCCCATGGGATTCCTGGACT..........2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGAA--TATTAA--CTTTGCTAA..........................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTTGGGCGTGCCCATGGGATTC.................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................ATGACTAGTTTAGGCATGGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TATGACTAGTTTAGGCATGGGCATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGGGCGTGCCCATGGGATTCCTGG.............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGTGCCCATGGGATTCC................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGGGCGTGCCCATGGGATT..................2211.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGCGGCCTGTTGGGCGTG.............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.............................ATGACTAGTTTAGGCATGGGCATGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCGTGCCCATGGGATT..................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TATGACTAGTTTAGGCATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GAAAAGATACAAAAAATATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------------------------------------------------------------------------------------------------------------------C-C-----CGAAT-----CT----GGTT--------TG--------CAT--GCA...................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
TAGCGCGCGACGGAAAAGATACAAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGCGTGCCCATGGGATTCCTGGACTT.........2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGCGGCCTGTTGGGCGTGCCCATGG......................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTC----CA---------------------------------------------------------------------------------------------------------------------------------C-C-----CGAAT-----CT----GGA..............................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGGCGTGCCCATGGGATTCCT...............2411.0010000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGGCGTGCCCATGGG.....................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGGCGTGCCCATGGGATT..................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCGGCCTGTTGGGCGTGCCCATG.......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACGGCGGCCTGTTGG..................................1811.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGATTCCTGGACTTC........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGCGGCCTGTTGGGCGTGCCCATGGGA....................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
........................AAAATATGACTAGTTTAGGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGGGCGTGCCCATGGGATTCCTGGAC...........2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................GACTAGTTTAGGCATGGGCATGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
TAGCGCGCGACGGAAAAGATACAAAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGATTCCTGGACTTCACA.....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................ATGACTAGTTTAGGCATGGGCATGAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCTAGTT--------------------------TTGGT------------------------TTAGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GCGCGACGGAAAAGATACAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGGGCGTGCCCATGGG.....................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGTGCCCATGGGATTCCTGGACTTC........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGGCGTGCCCATGGGATTCCTGGACTT.........2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
....................ACAAAAAATATGACTAGTTTAGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TAGCGCGCGACGGAAAAGATACAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGATTCCTGGACTTCAC......1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................AAAAATATGACTAGTTTAGGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.AGCGCGCGACGGAAAAGATACAAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.........................AAATATGACTAGTTTAGGCATGGGCATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCCTGTTGGGCGTGCCCA.........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................GTTG--G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCTAGTT--------------------------TTGGT------------------------TTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
........................AAAATATGACTAGTTTAGGCATGGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
........GACGGAAAAGATACAAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGGCGTGCCCATGGGAT...................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-----CGAAT-----CT----GGTT--------TG--------CAT--GC....................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..GCGCGCGACGGAAAAGAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGGCGTGCCCATGGGATTCCTGGA............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGATTCCTGGACTTCACAC....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........ACGGAAAAGATACAAAAAATATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAG---ATC-----G----GA---------TCTCCAC----G---------------CC.......................................................................................................................................................................................................................................................................................................................................................................................................................................2060.3320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TAGCGCGCGACGGAAAAGATACAAAAAATATGACTAGTTTAGGCATGGGCATGGTAAGTTG--G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCTAGTT--------------------------TTGGT------------------------TTAGTTAGCATT--CTCA--------------------------------GCAAAT--CTCTCAGT-T--AG----CC------------------------AGAG-----ATC-----------GATC----CCAG---ATC-----G----GA---------TCTCCCC----A---------------GGCC--------------------------------------------------------------------------------------------------------------------------------CGAATGAA--TATTA---CTTTGCTAACCTGACA-TT-CC-TATCTCTCTCTC----CA---------------------------------------------------------------------------------------------------------------------------------C-C-----CGAAT-----CT----GGAT--------TG--------CCT--GCAGAACGGCGGCCTGTTGGGCGTGCCCATGGGATTCCTGGACTTCACACCCGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTC----CA---------------------------------------------------------------------------------------------------------------------------------C-C-----CGAAT-----CT----GGAT--------TG--------CCT--G.....................................................2411.00100100000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGGCGTGCCCATGGGATTCCTGGACTT.........2911.00100100000000000000
............................TATGACTAGTTTAGGCATGGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000000100000
.......................AAAAATATGACTAGTTTAGGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000000000
..............................TGACTAGTTTAGGCATGGGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
.................................CTAGTTTAGGCATGGGCATGAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000000000000000
droSec2
TAGCGCGCGACGGAAAAGATACAAAAAATATGACTAGTTTAGGCATGGGCATGGTAAGTTG--G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCTAGTT--------------------------TTGGT------------------------TTAGTTAGCATT--CTCA--------------------------------GCAAAT--CTCTCAGT-T--AG----CC------------------------AGAG-----ATC-----------GATC----CCAG---ATC-----G----GA---------TCTCCCC----A---------------GGCC--------------------------------------------------------------------------------------------------------------------------------CGAATAAA--TATTA---CTTTGCTAACCTGACA-TT-CC-TATCTCTCTCTC----CA---------------------------------------------------------------------------------------------------------------------------------C-C-----TGAAT-----CT----GGAT--------TG--------CCT--GCAGAACGGCGGCCTGTTGGGCGTGCCCATGGGATTCCTGGACTTCACACCCGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................AAATATGACTAGTTTAGGCATGGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTC----CA---------------------------------------------------------------------------------------------------------------------------------C-C-----TGAAT-----CT----GGAT--------TG--------CCT--......................................................2411.0010010
TAGCGCGCGACGGAAAAGATACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
droYak3
TAGCGCGCGACGGAAAAGATACAAAAAATATGACTAGTTTAGGCATGGGCATGGTAAGTTG--G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGCTAGTT--------------------------TTGGT------------------------TTAGTTAGCATT--CTCA--------------------------------GCA-AT--CTCTCAGT-T--AG----CC------------------------AGAG-----ATC-----------GATC----CCAG---ATC-----G----GA---------TCTCCCC----A---------------AGCC--------------------------------------------------------------------------------------------------------------------------------C-AATGAA--TCTTA---CTTTGCTAACCTGACA-TT-CC-TATCTCTCTCTC----CA---------------------------------------------------------------------------------------------------------------------------------C-C-----CGAAT-----CT----GGAT--------TG--------CAT--GCAGAACGGCGGCCTGTTGGGCGTGCCCATGGGATTCCTGGACTTCACACCCGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGATTCCTGGACTTCACACC...2111.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTTGGGCGTGCCCATGGGA....................2111.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGATTCCTGGACTTCACACCC..2411.00100100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---------------------------------------------------------------------------------------------------------------------------------C-C-----CGAAT-----CT----GGAT--------TG--------CAT--GCA...................................................2311.00100100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGCGTGCCCATGGGATTCCT...............2211.00100000010000
.AGCGCGCGACGGAAAAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000
...............................GACTAGTTTAGGCATGGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000100000
droEre2
TAGCGCGCGACGGAAAAGATACAAAAAATATGACTAGTTTAGGCATGGGCATGGTAAGTTG--GTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGCTAGTT--------------------------TTGGT------------------------TTAGTTAGCATT--CTCA--------------------------------GCA-AA--CGCTCAGT-T--AG----CC------------------------AGAG-----ATC-----------GATC----CCAG---ATC-----G----GA---------TCTCCCC----A---------------AGCC--------------------------------------------------------------------------------------------------------------------------------C-AACGAA--TATTA---CATTGCTAACCTGACA-TT-CC-TATCTCTCTCTC----CA---------------------------------------------------------------------------------------------------------------------------------C-C-----CGAAA-----CT----GGAT--------TG--------CAT--GCAGAACGGCGGCCTGTTGGGCGTGCCCATGGGATTCCTGGACTTCACACCCGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGGCCTGTTGGGCGTGCCCATGGGATT..................2913.0030000003
...................................AGTTTAGGCATGGGCATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000020
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATTCCTGGACTTCACACCCGA2311.0010100000
.............................ATGACTAGTTTAGGCATGGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTC----CA---------------------------------------------------------------------------------------------------------------------------------C-C-----CGAAA-----CT----GGAT--------TG--------CAT--GCA...................................................2911.0011000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGCCTGTTGGGCGTGCCCATGGGA....................2611.0011000000
.......................................TAGGCATGGGCATGGTAAGTTG--GT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
.........................AAATATGACTAGTTTAGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
................................ACTAGTTTAGGCATGGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000

Generated: 05/16/2015 at 10:38 PM