ID:

dvi_7283

 Coordinate:

scaffold_12875:16324151-16324414 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-9.5 -9.3 -9.0

Flybase annnotation

exon [dvir_GLEANR_5595:6]; exon [dvir_GLEANR_5595:5]; CDS [Dvir\GJ20140-cds]; CDS [Dvir\GJ20140-cds]; intron [Dvir\GJ20140-in]

No Repeatable elements found

Sense Strand Reads

##################################################------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CCGGTTATGGGACATCTATGGGAGTATATATTTGGTGATGATATTGAAGGGTAAAACTAAAATTCCAAATAAACCGTCATTGTTAACCCCTAACCGCTAAAAAATCAAACAAATAACTCGAAACGGTAACCCATAAGAGTTATATATTTATATCATAACTGTAGCTAAATGTACTTCAACCAAAGCTGTATACTAATGTAATTAATGCCTAATTTGAAAACCATGTTTTACCAGCCTAACCGACTATGCTTAAAATTATTCATTCATGATTCATTATGCTCTACTAATCCCATTTCACCATAAAACCCCAACAGATATGACGAGACGGGCAACACAAAGGGCATTCCGGAGTTTACGCCGCCGT
*********************************************************************************************************.......(((((((.....((....))....)))))))..................(((((....((......))...))))).******************************************************************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total V116
male body		 SRR060665
9_females_carcasses_total
 M047
female body
 SRR060674
9x140_ovaries_total
 SRR060676
9xArg_ovaries_total
 SRR060677
Argx9_ovaries_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060664
9_males_carcasses_total
 SRR060672
9x160_females_carcasses_total
 SRR060679
140x9_testes_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060667
160_females_carcasses_total
 GSM1528803
follicle cells		 M028
head
 SRR060655
9x160_testes_total
 SRR060668
160x9_males_carcasses_total
 SRR060671
9x160_males_carcasses_total
 SRR060673
9_ovaries_total
 SRR060675
140x9_ovaries_total
 SRR060678
9x140_testes_total
 SRR060681
Argx9_testes_total
 SRR060687
9_0-2h_embryos_total
 SRR060688
160_ovaries_total
 SRR060686
Argx9_0-2h_embryos_total
 V047
embryo
..........................................................................................................................................................................GTACTTCAACCAAAGCTGT............................................................................................................................................................................... 19 0 1 2.00 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................AACTGTAGCTAAATGTACTTC........................................................................................................................................................................................... 21 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................CAAACAAATAACTCGAAACGG.............................................................................................................................................................................................................................................. 21 0 1 2.00 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................................AACACAAAGGGCATACCGGAGT............ 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
......................................................................................................................................................................................................................................................................................................................ACAGATATGACGGGACGGGCA................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................ATATATTTGGTGATGATATT............................................................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................ATATGACGAGACGGGCAACACAAAG......................... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....TATGGGACATCTATGGGA..................................................................................................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................TTACCAGCCTAACCGACTATGC................................................................................................................... 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................GACGGATATGACGAGACGGGCA................................. 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................................GGCATTCCGGAGTTTACGCC..... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................ATATATTTGGTGATGATATTGA............................................................................................................................................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TTTATATCATAACTGTAGCTAA.................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................GTTATATATTTATATCATAA.............................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................CAACACAAAGGGCATACCGGAGT............ 23 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................................GGCATTCCGGAGTTTACGCCGC... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................CCCTACAGATATGACGAGACG..................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................TTTATATCATAACTGTGGCTA..................................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................ATATATTTATATCATAACTGTAGCT...................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
CCGGCTATGGGACATCTATGGGA..................................................................................................................................................................................................................................................................................................................................................... 23 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................CAAACAAATAACTCGAAACGGT............................................................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................................................CACAAAGGGCATTCCGGA.............. 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................TGTAGCTAAATGTGCTTCAAC........................................................................................................................................................................................ 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................AACAGATATGACGAGACGGGC.................................. 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........GGACATCTATGGGAGTATATATTTGGT........................................................................................................................................................................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................ATTCATGATTCATTATGCTCT.................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................CGGATATGACGAGACGGGCAA................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................ACACAAAGGGCATACCGGAGT............ 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................................GGCATACCGGAGTTTACGCCGCC.. 23 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................AACAGATATGACGAGACGG.................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................CGGGCAACACAAAGGGCATACCGGAGT............ 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................CTACAGATATGACGAGACGGG................................... 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................ACAGATGTGACGAGACGGGCAT................................ 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................ATATGACGAGACGGGCAATT.............................. 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................................GGCATACCGGAGTTTACGCCGCCGT 25 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................GTATATTTGGTGATGATATTG.............................................................................................................................................................................................................................................................................................................................. 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................ACGAGACGGGCAACACAAAG......................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................ATAACTCCAGACGGTAAC.......................................................................................................................................................................................................................................... 18 2 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................AACGGTAACCCAAGAGAATTA.............................................................................................................................................................................................................................. 21 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.................................................................................................................TCACTCTAAGCGGTAACCCA....................................................................................................................................................................................................................................... 20 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.........................................................................................................................................................................................................................................................................................................................................TAACAAAAAGGGCATTGCGGA.............. 21 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.........................................................................................................................................................................................................................................................................................................CCATAAATCCCCAACAGCT................................................ 19 2 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
..........................................ATTCAAGGGTGAAACTAAGA.............................................................................................................................................................................................................................................................................................................. 20 3 12 0.08 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................AAAGGTGTATACAAATGTA.................................................................................................................................................................... 19 2 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................TTTGGTGATGATCGCGAAG........................................................................................................................................................................................................................................................................................................................... 19 3 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..............................ATTGCCGATGATATTGAAGG.......................................................................................................................................................................................................................................................................................................................... 20 3 19 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................CTCAAACAAACAACTCAAAAC................................................................................................................................................................................................................................................ 21 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

GGCCAATACCCTGTAGATACCCTCATATATAAACCACTACTATAACTTCCCATTTTGATTTTAAGGTTTATTTGGCAGTAACAATTGGGGATTGGCGATTTTTTAGTTTGTTTATTGAGCTTTGCCATTGGGTATTCTCAATATATAAATATAGTATTGACATCGATTTACATGAAGTTGGTTTCGACATATGATTACATTAATTACGGATTAAACTTTTGGTACAAAATGGTCGGATTGGCTGATACGAATTTTAATAAGTAAGTACTAAGTAATACGAGATGATTAGGGTAAAGTGGTATTTTGGGGTTGTCTATACTGCTCTGCCCGTTGTGTTTCCCGTAAGGCCTCAAATGCGGCGGCA
*******************************************************************************************************************************************************************************.......(((((((.....((....))....)))))))..................(((((....((......))...))))).********************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total V116
male body		 M047
female body
 SRR060681
Argx9_testes_total
 M027
male body		 SRR060655
9x160_testes_total
 SRR060679
140x9_testes_total
 SRR060676
9xArg_ovaries_total
 M028
head
 SRR060659
Argentina_testes_total
 SRR060678
9x140_testes_total
 SRR060683
160_testes_total
 SRR060656
9x160_ovaries_total
 SRR060657
140_testes_total
 SRR060658
140_ovaries_total
 SRR060665
9_females_carcasses_total
 SRR060667
160_females_carcasses_total
 SRR060680
 9xArg_testes_total
 SRR060663
160_0-2h_embryos_total
 SRR060662
9x160_0-2h_embryos_total
 SRR060668
160x9_males_carcasses_total
 V047
embryo
 SRR060672
9x160_females_carcasses_total
 SRR060684
140x9_0-2h_embryos_total
 V053
head
 SRR060664
9_males_carcasses_total
 SRR060685
9xArg_0-2h_embryos_total
......................................................................................................................................................................................................................................................................................................................TGTCTATACTGCTCTGCCCGT................................. 21 0 1 2.00 2 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................CGTTGTGTTTCCCGTAAGGCC............... 21 0 1 2.00 2 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................ACGAGATGGTTAGGGTAAAGT................................................................... 21 1 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................................TTCCCGTAAGGCCTCAAATGC....... 21 0 1 2.00 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................TGGTATTGTGGGGTTGGC.................................................. 18 2 3 1.33 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 1 0 0 0 0 0 0
.............................................................................................................................................................................................................................................TTGGCTGATACGAATTTTAAT.......................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................CCCTCATATATAAACCACTA..................................................................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................CATTAATTACGGATTAGACTT.................................................................................................................................................. 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................TTTGGGGTTGTCTATACTGCT......................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................GGGTTGTCTATACTGCTCTGC..................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................GGCTGATACGAATTTTAATAA........................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................GTCGGATTGGCTGATACGAAT................................................................................................................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................CTGCCCGTTGTGTTTCCCGTA.................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................ACATGAAGTTAGTTTCGACATATGA.......................................................................................................................................................................... 25 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................TGCTCTGCCCGTTGTGTTTCC........................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................CGAGGTGATTAGGGTAAAGTG.................................................................. 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................................TCCCGTAAGGCCTCAAGTGCG...... 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................CGAGATGATTAGGGTAAAG.................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................TCTGCCCGTTGTGTTTCCCGT..................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................GGTAAAGTGGTATTTTGGGGA...................................................... 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................................CCGTAAGGCCTCAAATGCGG..... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................GATTAGGGTAAAGTGGTA............................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................................TTTCCCGTAAGGCCTCAAATG........ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................CATCCCATTTTGATTTTA............................................................................................................................................................................................................................................................................................................. 18 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................GGTCGGATTGGCTGATACGAAT................................................................................................................ 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................ACGAGATGATTAGGGTAAAGT................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGAGCTTTGCCATTGGGTATT.................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................AGTGGTATTTTGGGGTTGTCT................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................GTACTAAGTAATACGAGATGAT.............................................................................. 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................TTTTGGGGTTGTCTATACTGC.......................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................GGTAATGTGGTATTTTGG......................................................... 18 1 7 0.57 4 0 0 1 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TGTGGCAGCAAGAATTGGG................................................................................................................................................................................................................................................................................... 19 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................................CGTAAAGCTTCAAATGTGGC.... 20 3 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................GTTTGGCGATCTTTTGGTTTGT............................................................................................................................................................................................................................................................. 22 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................TGGGGTAAAGTGGTAGTTT........................................................... 19 2 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................ATACGAGATGGTCAGGGGA....................................................................... 19 3 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................................TGTAAAGCTTCAAATGCGGC.... 20 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
................................ACGACTCCTATAACTTCCTA........................................................................................................................................................................................................................................................................................................................ 20 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.................................................................................................................................................................................................................................................................................................GGTAAAATGGTATCTTGG......................................................... 18 2 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................................GTAAAGCTTCAAATTCGGC.... 19 3 20 0.10 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.........................................................................................................................................................................................................................................................................................................GGTATTGTGGGGTTGGCC................................................. 18 3 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................AGGATTGGCGATTTGTTA................................................................................................................................................................................................................................................................... 18 2 14 0.07 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................CCACTAAGTAGTACGAGAT................................................................................. 19 3 15 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.....................................................................................................................................................................................................................................................................................................................................................GTAAAGCTTCAAATGTGGC.... 19 3 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.........................................................................................................................................................................................................................................................................................................................................................GGCCTCAAATGCGGCATG. 18 3 18 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
........................................................................TGGCAGCAAGAATTGGGT.................................................................................................................................................................................................................................................................................. 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
................................................................................................................................................................................................................................................................................................GGGTAGAGTGGCATTGTG.......................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12875:16324101-16324464 - dvi_7283 CCGGTTATGGGACATCTATGGGAGTATATATTTGGTGATGATATTGAAGGGTAAAACTAAAATTCCAAA--------------TAAACCGTCATTGTTAACCCCTAACCGCTAAAAAATCAAA--------------------------CAAATAACTCGAAACGGT-------AAC-CCATAAGAGTT--------------------------------------------------------ATATATTTAT--A------TCATA----------------A----CTGTAGCTAAATGTACTT---------------------------------------------------------------------------------------CAACCAAAGCTGTATACTAATGTAATTAATGCCTAATTTGAAAACCATG-------------TTTTACCAGCCTAACCGACTATGCTTAAAATTATTCATTCATGATTCATTATGCTCTA-----------CTAATCCCATTTCACCAT-A-----AAACCCCAACAGATATGACGAGACGGGCAACACAAAGGGCATTCCGGAGTTTACGCCGCCGT
droMoj3 scaffold_6496:7433835-7434164 + CCGGTTATGGGACATCTATGGGAATATATATTTGGTGATGATATTGAAGGGTAA-TGCTTAATTACAATTAACAAACGAAAAGCATATTAATAT----------------------AATTAAT--------------------------AAAATAACTCCAAATGGTTTCAAGGCATGCCAGACGAGTT-GT-----------------------------------------------------TTTCTACGATCTA------TTGAA----------------TAACCCTACACTTAGCTTGACTA-----ACT--------------TGTATGAGTTGA---------------------------------------------------------------TCTAATCCCGTTTGATATCTAACCA-----------------------A---------TAAC-------------------------------------------CTAACAAACTGTTTTACTAATTCCATTTACACAT-ATGTACAAACCTCTTTAGATATGATGAGACAGGCAATACGAAGGGCATTCCAGAGTTCACACCGCCCA
droGri2 scaffold_15245:5182011-5182365 - CCGGTTATGGGACACGTATGGGAATATATATTTGGTGATGATATTGATGGGTAAAACTAAAATTTTA-TCTAAAAAC------------------------------------------TAAAATTTTAATTTAAAACAATCTCAACAGAAAATAACTTTAAATG--------------------AGTT--------------------------------------------------------TCTTTATGAT--A------TCGAA----------------T----TTATATATAGCTATACTA---------------------------------------------------------------------------------------AAACTAACTTTCTAAACGCATTTCATAATTAACAAAATTTAAAACTAATACTAATACAAAAATCTAAACAACTTTGCATATTATGCGTAAACAT--------TTTATTCATTGTGCTTCA-----------CTAATTCTGGATCACAATCG-----AAATTCTAACAGATATGATGAAACTGGCAATACAAAGGGCACACCCGAATTCACACCGCCAA
droWil2 scf2_1100000004382:252202-252450 - CCGGTTATGGGACATCTTTGGGAATATATATTTGGTGATGATATTTATGGGTAAAATCCTAAC---------------------AAATTATATTTATTAAT------------------------------------------------TCACTAACTT-----------------------------------------------------------------------------------------------------------------------------------------------------GATTATTTTTTTTATCACTAATTTTGTGCGTCACTCTCCACTAACATTCTCATATGGTTTCTATTGTTAATCAT------------------------------------------------------------------------------------------------------------------CCCAAT--------CTAATACAATGTTT---------T----------TA-----CCCATTCTATAGATACGATGAATCGGGTAATACTAAGGGTACACCAGAATTCCAACCACCGC
dp5 3:16245361-16245433 + CCGGTTTTGGGACATCTATGGGAGTATATATTTGGTGATGATATTTATGGGTAAACACTTAATTTCCAA-------------ACAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_4:519193-519648 - CCGGTTTTGGGACATCTATGGGAGTATATATTTGGTGATGATATTTATGGGTAAACACTTAATTTCCAA-------------ACAAT--------------------------------TCAAA--------------------------ATGTAATTAAAGGTGGTTTTGGG-AAA-CCTTGAGGGCCTGCACATGTTTAAGATTCTCAAATGCATTCAAACTGTCGCACTCACCGTATGCGGCAGATATGTAT--ATGTACATATGTACAGTGGAAAACCTTCT----TAGCATGTAGCCAGCCCAGAACACTGTATTCCACAGCAACCTTAAACGCAAACACAAACTAATTCTCCCATAT---TCCTGTGACTAACCATTGTTTCGTAAGGTTAACCAAAGCCTCTTAATTACGTTGCCTTCG---------------------------------TTTACTGCCTCACAGAAA--------AGGTAATACTTCTTGAT--------CTAACCAAACG-----------CT----------TG-----CATACCCTGCAGATACGACGAGGCTGGCGACACCAAGGGCACACCTGAGTTCCAGCCCCCGC
droAna3 scaffold_13266:17830696-17830793 - AT-----------------------------TTATTAATCTTATATGCTAATAAA---TTGATTCCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-----AAACTTCTGTAGATATGACGAGTCTGGTAACACGAAGGGCACCCCCGAGTTCCAGCCACCCA
droBip1 scf7180000396735:1095842-1095909 - CCGGTTTTGGGCCATCTATGGGAATATATATTTGGTGATGATATATATGGGTAAACACTTA-TTCCAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302406:73311-73379 - CCGGTTTTGGGACATCTTTGGGAGTATATATTTGGTGATGATATTTATGGGTAAACACATAATTCCAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000454066:1324710-1324778 + CCGGTTTTGGGACATCTATGGGAGTATATATTTGGTGATGATATTTATGGGTAAACACTTAGTTCCAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491349:1096949-1097017 + CCGGTTTTGGGACACCTTTGGGAGTATATATTTGGTGATGATATTTATGGGTAAACACTTAATTCCAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000779999:406464-406532 + CCGGTTTTGGGACATCTATGGGAGTATATATTTGGTGATGATATTTATGGGTAAACACTTACTTCCAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000301506:56272-56343 - CCGGTTTTGGGACATCTATGGGAGTATATTTTTGGTGATGATATTTATGGGTAAACACTAAAGCACTAA-------------GCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415683:84877-84945 + CCGGTTTTGGGACATCTATGGGAGTATATATTTGGTGATGATATTTATGGGTAAACACTTAATTCCAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409672:4658189-4658304 + T-GCTTACAATATATTTCCCGCAAAATATCATCCTCAATGCTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCTATTT-----------CC----------TG-----ATAACCCTATAGATATGATGAATCTGGTAACACCAAGGGCATACCCGAATTCCAGCCACCCA
dm3 chr2R:6358714-6358768 - CCGGTTTTGGGACACCTGTGGGAGTATATATTTGGTGATGATATTTATGGGTAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 2r:7127049-7127123 - CCGGTTTTGGGACACCTGTGGGAGTATATATTTGGTGATGATATTTATGGGTAAACACTTAACTACAAA-------------GCACAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_1:3970304-3970378 - CCGGTTTTGGGACACCTGTGGGAGTATATATTTGGTGATGATATTTATGGGTAAACACTTAACTACAAA-------------GCACAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 2R:2781314-2781388 + CCGGTTTTGGGACACCTGTGGGAGTATATATTTGGTGATGATATTTATGGGTAAACACTTAACTACAAA-------------GCACAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4845:19393295-19393349 + CCGGTTTTGGGACACCTGTGGGAGTATATATTTGGTGATGATATTTATGGGTAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
CCGGTTATGGGACATCTATGGGAGTATATATTTGGTGATGATATTGAAGGGTAAAACTAAAATTCCAAA--------------TAAACCGTCATTGTTAACCCCTAACCGCTAAAAAATCAAA--------------------------CAAATAACTCGAAACGGT-------AAC-CCATAAGAGTT--------------------------------------------------------ATATATTTAT--A------TCATA----------------A----CTGTAGCTAAATGTACTT---------------------------------------------------------------------------------------CAACCAAAGCTGTATACTAATGTAATTAATGCCTAATTTGAAAACCATG-------------TTTTACCAGCCTAACCGACTATGCTTAAAATTATTCATTCATGATTCATTATGCTCTA-----------CTAATCCCATTTCACCAT-A-----AAACCCCAACAGATATGACGAGACGGGCAACACAAAGGGCATTCCGGAGTTTACGCCGCCGTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............................................................................................................................................................................................................................................................................................................GTACTT---------------------------------------------------------------------------------------CAACCAAAGCTGT.............................................................................................................................................................................................................1912.002000000000000000100100000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................A----------------A----CTGTAGCTAAATGTACTT---------------------------------------------------------------------------------------C.........................................................................................................................................................................................................................2112.002000000000000000000000000002000000000000000000000000000000000000
.......................................................................................................................CAAA--------------------------CAAATAACTCGAAACGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000000000000000000000000110000000000000000000000000000000000000
.........................ATATATTTGGTGATGATATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000001000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGACGAGACGGGCAACACAAAG.........................2511.001000000000001000000000000000000000000000000000000000000000000000
.....TATGGGACATCTATGGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACCAGCCTAACCGACTATGC....................................................................................................................................2211.001000000000000000000000000001000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCATTCCGGAGTTTACGCC.....2011.001001000000000000000000000000000000000000000000000000000000000000
.........................ATATATTTGGTGATGATATTGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000010000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................TTTAT--A------TCATA----------------A----CTGTAGCTAA.........................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000100000000000000000000000000000000000
..........................................................................................................................................................................................GTT--------------------------------------------------------ATATATTTAT--A------TCATA----------------A----...................................................................................................................................................................................................................................................................................................................................2011.001000000000000001000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCATTCCGGAGTTTACGCCGC...2211.001000000000000000000000100000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................ATATATTTAT--A------TCATA----------------A----CTGTAGCT...........................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................CAAA--------------------------CAAATAACTCGAAACGGT-------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAAAGGGCATTCCGGA..............1811.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGATATGACGAGACGGGC..................................2111.001000000000000000000000000000100000000000000000000000000000000000
.........GGACATCTATGGGAGTATATATTTGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCATGATTCATTATGCTCT...................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGATATGACGAGACGG....................................1911.001000001000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGACGAGACGGGCAATT..............................2011.001000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAGACGGGCAACACAAAG.........................2011.001000000000000000000000000000000000000000000000000000000000000010
droMoj3
CCGGTTATGGGACATCTATGGGAATATATATTTGGTGATGATATTGAAGGGTAA-TGCTTAATTACAATTAACAAACGAAAAGCATATTAATAT----------------------AATTAAT--------------------------AAAATAACTCCAAATGGTTTCAAGGCATGCCAGACGAGTT-GT-----------------------------------------------------TTTCTACGATCTA------TTGAA----------------TAACCCTACACTTAGCTTGACTA-----ACT--------------TGTATGAGTTGA---------------------------------------------------------------TCTAATCCCGTTTGATATCTAACCA-----------------------A---------TAAC-------------------------------------------CTAACAAACTGTTTTACTAATTCCATTTACACAT-ATGTACAAACCTCTTTAGATATGATGAGACAGGCAATACGAAGGGCATTCCAGAGTTCACACCGCCCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..............................TTTGGTGATGATATTGAAGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATATGATGAGACAGGCA.................................1911.001100000
....................................GATGATATTGAAGGGTAA-TGCTTAATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
droGri2
CCGGTTATGGGACACGTATGGGAATATATATTTGGTGATGATATTGATGGGTAAAACTAAAATTTTA-TCTAAAAAC------------------------------------------TAAAATTTTAATTTAAAACAATCTCAACAGAAAATAACTTTAAATG--------------------AGTT--------------------------------------------------------TCTTTATGAT--A------TCGAA----------------T----TTATATATAGCTATACTA---------------------------------------------------------------------------------------AAACTAACTTTCTAAACGCATTTCATAATTAACAAAATTTAAAACTAATACTAATACAAAAATCTAAACAACTTTGCATATTATGCGTAAACAT--------TTTATTCATTGTGCTTCA-----------CTAATTCTGGATCACAATCG-----AAATTCTAACAGATATGATGAAACTGGCAATACAAAGGGCACACCCGAATTCACACCGCCAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...............GTATGGGAATATATATTTGGTGATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCAATACAAAGGGCACA...................1911.00101
droWil2
CCGGTTATGGGACATCTTTGGGAATATATATTTGGTGATGATATTTATGGGTAAAATCCTAAC---------------------AAATTATATTTATTAAT------------------------------------------------TCACTAACTT-----------------------------------------------------------------------------------------------------------------------------------------------------GATTATTTTTTTTATCACTAATTTTGTGCGTCACTCTCCACTAACATTCTCATATGGTTTCTATTGTTAATCAT------------------------------------------------------------------------------------------------------------------CCCAAT--------CTAATACAATGTTT---------T----------TA-----CCCATTCTATAGATACGATGAATCGGGTAATACTAAGGGTACACCAGAATTCCAACCACCGCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATAGATACGATGAATCGGGT..................................2212.00200200
...GTTATGGGACATCTTTGGGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATAGATACGATGAATCGGG...................................2111.00100100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATACGATGAATCGGGTA.................................1911.00100100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGATGAATCGGGTAATACT............................2111.00100100
..GGTTATGGGACATCTTTGGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGATGAATCGGGTAATACTAAG.........................2311.00100100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAGATACGATGAATCGGGT..................................2111.00100100
.CGGTTATGGGACATCTTTGGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGGTACACCAGAATTCCAACCAC...2511.00100100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATAGATACGATGAATCGGGTAA................................2411.00100100
...............CTTTGGGAATATATATTTGGTGAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
dp5
CCGGTTTTGGGACATCTATGGGAGTATATATTTGGTGATGATATTTATGGGTAAACACTTAATTTCCAA-------------ACAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................TTGGTGATGATATTTATGGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...............CTATGGGAGTATATATTTGGTGAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
......TTGGGACATCTATGGGAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.......................GTATATATTTGGTGATGATATTTATGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
.................ATGGGAGTATATATTTGGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
droPer2
CCGGTTTTGGGACATCTATGGGAGTATATATTTGGTGATGATATTTATGGGTAAACACTTAATTTCCAA-------------ACAAT--------------------------------TCAAA--------------------------ATGTAATTAAAGGTGGTTTTGGG-AAA-CCTTGAGGGCCTGCACATGTTTAAGATTCTCAAATGCATTCAAACTGTCGCACTCACCGTATGCGGCAGATATGTAT--ATGTACATATGTACAGTGGAAAACCTTCT----TAGCATGTAGCCAGCCCAGAACACTGTATTCCACAGCAACCTTAAACGCAAACACAAACTAATTCTCCCATAT---TCCTGTGACTAACCATTGTTTCGTAAGGTTAACCAAAGCCTCTTAATTACGTTGCCTTCG---------------------------------TTTACTGCCTCACAGAAA--------AGGTAATACTTCTTGAT--------CTAACCAAACG-----------CT----------TG-----CATACCCTGCAGATACGACGAGGCTGGCGACACCAAGGGCACACCTGAGTTCCAGCCCCCGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACCAAGGGCACACCTGAGT............2111.001000010
...................................................................................................................................................................................CTTGAGGGCCTGCACATGTTTAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATACGACGAGGCTGGCGACACCAAGGG.......................2811.001100000
droAna3
AT-----------------------------TTATTAATCTTATATGCTAATAAA---TTGATTCCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-----AAACTTCTGTAGATATGACGAGTCTGGTAACACGAAGGGCACCCCCGAGTTCCAGCCACCCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGACGAGTCTGGTAACACGAAGGGC......................2612.002000002
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACACGAAGGGCACCCCCGAGTTCC.........2511.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCTGGTAACACGAAGGGCA.....................2111.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGACGAGTCTGGTAACACGAAGGG.......................2511.001001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGCACCCCCGAGTTCCAGCCACCC.2611.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGACGAGTCTGGTAACACG............................2011.001010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTAACACGAAGGGCACCCCCGAGTTCC.........2811.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGACGAGTCTGGTAACACGAAG.........................2511.001000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAGTCTGGTAACACGAAGGGCA.....................2511.001000001
droBip1
CCGGTTTTGGGCCATCTATGGGAATATATATTTGGTGATGATATATATGGGTAAACACTTA-TTCCAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
CCGGTTTTGGGACATCTTTGGGAGTATATATTTGGTGATGATATTTATGGGTAAACACATAATTCCAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CCGGTTTTGGGACATCTATGGGAGTATATATTTGGTGATGATATTTATGGGTAAACACTTAGTTCCAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
CCGGTTTTGGGACACCTTTGGGAGTATATATTTGGTGATGATATTTATGGGTAAACACTTAATTCCAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CCGGTTTTGGGACATCTATGGGAGTATATATTTGGTGATGATATTTATGGGTAAACACTTACTTCCAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
CCGGTTTTGGGACATCTATGGGAGTATATTTTTGGTGATGATATTTATGGGTAAACACTAAAGCACTAA-------------GCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
CCGGTTTTGGGACATCTATGGGAGTATATATTTGGTGATGATATTTATGGGTAAACACTTAATTCCAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
T-GCTTACAATATATTTCCCGCAAAATATCATCCTCAATGCTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCTATTT-----------CC----------TG-----ATAACCCTATAGATATGATGAATCTGGTAACACCAAGGGCATACCCGAATTCCAGCCACCCASizeHit CountTotal NormTotal
No Reads
dm3
CCGGTTTTGGGACACCTGTGGGAGTATATATTTGGTGATGATATTTATGGGTAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................TATTTGGTGATGATATTTATGGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................GTGGGAGTATATATTTGGTGATGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TATTTGGTGATGATATTTAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TGGTGATGATATTTATGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TATTTGGTGATGATATTTATGGGTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CCGGTTTTGGGACACCTGTGGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..............CCTGTGGGAGTATATATTTGGTGATGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CACCTGTGGGAGTATATATTTGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
................................TGGTGATGATATTTATGGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.....................GAGTATATATTTGGTGATGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................TGGTGATGATATTTATGGGTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
.......TGGGACACCTGTGGGAGTATATAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........GGACACCTGTGGGAGTATAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.......................GTATATATTTGGTGATGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TTTTGGGACACCTGTGGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GGTTTTGGGACACCTGTGGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
................TGTGGGAGTATATATTTGGTGAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...............................TTGGTGATGATATTTATGGGTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................ATATATTTGGTGATGATAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TTTGGTGATGATATTTATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GGGAGTATATATTTGGTGATGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................ATATTTGGTGATGATATTTATGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TTTGGTGATGATATTTATGGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CACCTGTGGGAGTATATATTTGGTGATGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GTTTTGGGACACCTGTGGGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............ACCTGTGGGAGTATATATTTGGTGATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.................GTGGGAGTATATATTTGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
...GTTTTGGGACACCTGTGGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TGGGACACCTGTGGGAGTATATA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.................................GGTGATGATATTTATGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CCGGTTTTGGGACACCTGTGGGAGTATATATTTGGTGATGATATTTATGGGTAAACACTTAACTACAAA-------------GCACAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..GGTTTTGGGACACCTGTGGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
...................GGGAGTATATATTTGGTGAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
..GGTTTTGGGACACCTGTGGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
.............................ATTTGGTGATGATATTTATGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
....................................GATGATATTTATGGGTAAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000001000000
............................TATTTGGTGATGATATTTATGGAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
............CACCTGTGGGAGTATATATTTGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
droSec2
CCGGTTTTGGGACACCTGTGGGAGTATATATTTGGTGATGATATTTATGGGTAAACACTTAACTACAAA-------------GCACAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..GGTTTTGGGACACCTGTGGGAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020200
....TTTTGGGACACCTGTGGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100
...GTTTTGGGACACCTGTGGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
.................GTGGGAGTATATATTTGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100
................TGTGGGAGTATATATTTGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
droYak3
CCGGTTTTGGGACACCTGTGGGAGTATATATTTGGTGATGATATTTATGGGTAAACACTTAACTACAAA-------------GCACAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........GACACCTGTGGGAGTATATATTTGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200000020000
............CACCTGTGGGAGTATATATTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.......................GTATATATTTGGTGATGATATTTATGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
.....TTTGGGACACCTGTGGGAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
...........................ATATTTGGTGATGATATTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
............................TATTTGGTGATGATATTTATGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
.......................GTATATATTTGGTGATGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
.........................ATATATTTGGTGATGATATTTATGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
.........GGACACCTGTGGGAGTATATAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.........................ATATATTTGGTGATGATATTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
..GGTTTTGGGACACCTGTGGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
..GGTTTTGGGACACCTGTGGGAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
....................GGAGTATATATTTGGTGATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
droEre2
CCGGTTTTGGGACACCTGTGGGAGTATATATTTGGTGATGATATTTATGGGTAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...GTTTTGGGACACCTGTGGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000200
.....TTTGGGACACCTGTGGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000100
................................TGGTGATGATATTTATGGGTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
.........GGACACCTGTGGGAGTATATATTTGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
...GTTTTGGGACACCTGTGGGAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010

Generated: 05/16/2015 at 10:09 PM