ID:

dvi_699

 Coordinate:

scaffold_10324:259517-259667 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-41.2 -41.0 -40.9

Flybase annnotation

CDS [Dvir\GJ15030-cds]; exon [dvir_GLEANR_15335:3]; intron [Dvir\GJ15030-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CATTGCCCAGGGCGCCACGGAGCCGCTGTACCGCGCCAACTCAATGCCCGGTAAGTTAACCATGATGCTGTCCTCCCAAGATCCAATCCATATATGTGAACAAAGCTTGGCAGGTCGATCAAAGTTTTTCTTAGTAGCCTAGGCTAGCCTCTTAGAGGCTGGCCGCCTTAGTCCGAGCATCCTGCTGGCTGTGTCTGAATTAATTCTAAAAGCCAAATTATAAATTTATAATTTATGACGGAACAGAGAAT
**************************************************.((((..(((..((((..((.(((.(((((......((((....)).))......))))).))).))))))..)))...))))........((((((((((...))))))))))((..(((.((.((((...))))))))).)).......************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 GSM1528803
follicle cells		 SRR060686
Argx9_0-2h_embryos_total
 SRR060664
9_males_carcasses_total
 SRR060659
Argentina_testes_total
 SRR060667
160_females_carcasses_total
 SRR060679
140x9_testes_total
 SRR060684
140x9_0-2h_embryos_total
 V053
head
 M027
male body		 V116
male body		 M061
embryo
 SRR060655
9x160_testes_total
 SRR060681
Argx9_testes_total
 SRR060672
9x160_females_carcasses_total
........................................................................CTCCGAAGAGCCAATCCAT................................................................................................................................................................ 19 2 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................TCGATTCCCGGTATGTTAACCA............................................................................................................................................................................................. 22 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......CCAGGGCGCCACGGAGCCT.................................................................................................................................................................................................................................. 19 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
................ACGGAGACGCTGTACCGCGCC...................................................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
CATTGCCCAGGGCGCCACGGA...................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............CACGGAGCCGCTGTAACGCGC....................................................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..TTGCCCAGGGCGCCACGGAGCCGC................................................................................................................................................................................................................................. 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................ATTTATAATTTATGACGGAACAGAGA.. 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................GTTTTTCTTAGTAGCCTAGGCTAGC....................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................CGCGCCAACTCAATGCCCGGCAAT.................................................................................................................................................................................................... 24 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..................GGAGCCGCTGTACCGCGCCA..................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......CCAGGGCGCCACGGACCGG.................................................................................................................................................................................................................................. 19 2 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
........................................TCAATCCCCGGTATGTGAACCA............................................................................................................................................................................................. 22 3 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.ATTGCCCAGGGCGATACCGA...................................................................................................................................................................................................................................... 20 3 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................TTTTCTTAGTAGCCGAGC............................................................................................................ 18 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
....................................................................................................................................................................................................GAATTAATTTTAGGAGCCAAA.................................. 21 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
........................................................................................................................................................................CAGTCCGACGATCCTGCT................................................................. 18 3 20 0.20 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................ATCATCCTGCTGGCGGTGTA........................................................ 20 3 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................GCTAGCTTCTTAGAGGGA........................................................................................... 18 3 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0
.........................................................................................................................................................................AGTCCGACGATCCTGCTGT............................................................... 19 3 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................TTGATTATTTATGACCGAAC....... 20 3 17 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
...............................................................................................................TGGTCCATCAAAGTTTGTC......................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
..............................................CCCGGTAAGGGAACCA............................................................................................................................................................................................. 16 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

GTAACGGGTCCCGCGGTGCCTCGGCGACATGGCGCGGTTGAGTTACGGGCCATTCAATTGGTACTACGACAGGAGGGTTCTAGGTTAGGTATATACACTTGTTTCGAACCGTCCAGCTAGTTTCAAAAAGAATCATCGGATCCGATCGGAGAATCTCCGACCGGCGGAATCAGGCTCGTAGGACGACCGACACAGACTTAATTAAGATTTTCGGTTTAATATTTAAATATTAAATACTGCCTTGTCTCTTA
**************************************************.((((..(((..((((..((.(((.(((((......((((....)).))......))))).))).))))))..)))...))))........((((((((((...))))))))))((..(((.((.((((...))))))))).)).......************************************************** 		Read size # Mismatch Hit Count Total Norm Total V053
head
 V047
embryo
 SRR060681
Argx9_testes_total
 M047
female body
 SRR060682
9x140_0-2h_embryos_total
.........................GACATGCCGCGGTTGCGT................................................................................................................................................................................................................ 18 2 2 0.50 1 0 1 0 0 0
...................CTCTGCGACATGGTGCGGTTT................................................................................................................................................................................................................... 21 3 2 0.50 1 1 0 0 0 0
...................CTCGGCGACATGGTGCGGGTT................................................................................................................................................................................................................... 21 3 4 0.25 1 1 0 0 0 0
....................TCGGCGACAGGGTGCGGCTGA.................................................................................................................................................................................................................. 21 3 6 0.17 1 1 0 0 0 0
.................................................CCATTTAATTGCTACTACGC...................................................................................................................................................................................... 20 3 7 0.14 1 1 0 0 0 0
...............................................................................................................................................................ACCGGCGGAACCAGGCAC.......................................................................... 18 2 8 0.13 1 0 0 1 0 0
.............CGGTGCATTGGCGACACGGC.......................................................................................................................................................................................................................... 20 3 10 0.10 1 1 0 0 0 0
....CGGGTTACGCGGTGCCTCCG................................................................................................................................................................................................................................... 20 3 20 0.10 2 0 0 0 2 0
......................................................................AGGAGGGTTAAATGTTAGGT................................................................................................................................................................. 20 3 12 0.08 1 0 1 0 0 0
.........................................................................AGGGTTCTAGCTCATGTAT............................................................................................................................................................... 19 3 20 0.05 1 0 1 0 0 0
................................................................................................................................................................CTGGTAGAATCAGGCTCG......................................................................... 18 3 20 0.05 1 0 0 0 0 1
....................TCGGCGACATGGTGCGGGTT................................................................................................................................................................................................................... 20 3 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_10324:259467-259717 - dvi_699 CATTGCCCAGGGCG---CCACGGAGCCGCTGTACCGCGCCAACTCAATGCCCGGTAAGT------TAACCATGATGCTGTCCTCCCAAGATCCAATCCATATATGTGAACAAAGCTTGGCAG--------------------GTCGATCA-------AAGTTTTTCTTAGTAGCCTAGGCTAGCCTCTTAGAGGCTGGCCGCCTTAGTCCGAGCATCCTGCTGGCTGTGTCTGAATTAATTCTAAAAGCCAAATTATAAATTTATAATTTATGACG--------------------------------------GAACA----GAGAAT
droMoj3 scaffold_6496:2074283-2074335 - TATAGCACAAGGAG---CAGCTGAACCGCTATATCGTGCCAATTCAATGCCAGGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15245:15364781-15364836 + AATCGCCCAGGGCG---GAGCGGAACCGCTCTACCGTCCCAATTCAATGCCTGGTAAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004513:3326685-3326736 - AGGAGCGGGAGGGGCTGCAGAACCACCACTTTATAGGACCAATGCAATGCCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 3:15901671-15901735 - CCTAGCCACAGGACCACCGACGGAACCGCTCTATCGCACCAGTGCCATGCAAGGTAAGC------CAATCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_4:860216-860274 + CA------CAGGACCACCGACGGAACCGCTCTATCGCACTAGTGCCATGCAAGGTAAGC------CATTCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13266:162863-162918 + AATTTCATCAGGACCGCCCACGGAGGCACTTTTCCGAGCTAATTCAATGGCAGGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396730:1184864-1184918 + T---TCCTCAGGGCCGCCAACAGAGCCACTCTTCCGAGCTAACTCCATGCCAGGTGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302476:850163-850217 - TA--TCCACAGGGCCGATAACTGAGCCTCTGTATAGGACCAATTCCATGCAGGGAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000453858:1250162-1250232 + GATTTCCACTGGACCACAAACCGAGGCGCTCTACAGGAGTAACTCAATACTAGGTAATCATAAGTTAACCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491107:1651345-1651577 + TTCCACCGGTGGTCCGCCAAGCGAGGCGCTCTACAGGTCCAACTCCATGCTAGGTAAGCACG------TGC------------------------------TGTTGCTACTAGAGTTGGGTATTTGGGTCACGAGTTGGTGAATAGA-------CAAGAGTTACTCAT---------------CTTCTTTAAAGTTAACC----TAACCCAAGTG---------------------------------CTTCATTATT-TCTTGTAATTTATGGCACAACCAACTTGGCAAGAATGCAATTAAGTAAGCAAGTTAACACTGCACAGTAT
droRho1 scf7180000777217:348274-348331 - AATTTCCACCGGACCGCCAACCGAGCCGCTCTACAGGTCCAACTCCATGCTAGGTAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000301506:1259805-1259970 + GATTTCCACCGGACCACCGACCGAACCGCTTTTCAGGAGCAACTCCATGCTAGGTAATTATC------AGA------------------------------TCTTTGCTTAAGAATTTACAA--------------------TTTGAGCACAGGTATGAGTTAATCAT---------------ATTCTTT---------------------------------------------------TTATTTGAAAAATATTACATTTA--------------------------------------AGTTTTTGAGCCAAACTTAC---TAAG
droTak1 scf7180000415401:523979-524035 - AATTTCCACCGGACCACCAAGCGAACCACTTTTCAGGAGCAACTCCATGCTAGGTAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409209:704507-704565 + AATTTCAACAGGACCACCAATCGAACCACTTTACAGGGCTAACTCCATGCTTGGTAAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chr2R:5460419-5460475 - GATATCTAGCGGACCAGGAACGGAACCAATTTACAGGAATAGCTCCATGTTAGGTAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 2r:6245549-6245604 - AATATCTAGCGGACCAGGAACGGAACCAATTTACAGGAATAGCTCCATGTTAGGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_1:3075139-3075194 - GATATCTAGCGGACCAGGAACGGAACCAATTTACAGGAATAGCTCCATGTTAGGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 2L:18091944-18091998 - TA--TCCAGCGGACCAGCAACGGAACCAATTTACAGGAACAGCTCGATGTTAGGTAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4929:8896069-8896125 + GATATCCACCGGTCCAGTAACGGAACCAATTTACAGGAACAGCTCCATGTTAGGTAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
CATTGCCCAGGGCG---CCACGGAGCCGCTGTACCGCGCCAACTCAATGCCCGGTAAGT------TAACCATGATGCTGTCCTCCCAAGATCCAATCCATATATGTGAACAAAGCTTGGCAG--------------------GTCGATCA-------AAGTTTTTCTTAGTAGCCTAGGCTAGCCTCTTAGAGGCTGGCCGCCTTAGTCCGAGCATCCTGCTGGCTGTGTCTGAATTAATTCTAAAAGCCAAATTATAAATTTATAATTTATGACG--------------------------------------GAACA----GAGAATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......CCAGGGCG---CCACGGAGCCT.............................................................................................................................................................................................................................................................................................................1911.001000000000100000000000000000000000000000000000000000000000000000
CATTGCCCAGGGCG---CCACGGA.................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..TTGCCCAGGGCG---CCACGGAGCCGC............................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000100000000000000000000000000
...................................................................................................................................................................................................................................................................ATTTATAATTTATGACG--------------------------------------GAACA----GAGA..2611.001000000000000000001000000000000000000000000000000000000000000000
...............................................................................................................................................................GTTTTTCTTAGTAGCCTAGGCTAGC.................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.....................GGAGCCGCTGTACCGCGCCA................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000100000000000000000000000000
droMoj3
TATAGCACAAGGAG---CAGCTGAACCGCTATATCGTGCCAATTCAATGCCAGGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................................ATCGTGCCAATTCAATGCCAG....................................................................................................................................................................................................................................................................................2111.001100000
.................................TCGTGCCAATTCAATGCCAG....................................................................................................................................................................................................................................................................................2011.001100000
.......................AACCGCTATATCGTGCCA................................................................................................................................................................................................................................................................................................1811.001100000
............AG---CAGCTGAACCGCTATATCGT....................................................................................................................................................................................................................................................................................................2211.001100000
.ATAGCACAAGGAG---CAGCTGAACCGCTAT.........................................................................................................................................................................................................................................................................................................2811.001100000
..........................CGCTATATCGTGCCAATTCA...........................................................................................................................................................................................................................................................................................2011.001100000
..TAGCACAAGGAG---CAGCTGAACC..............................................................................................................................................................................................................................................................................................................2211.001100000
..TAGCACAAGGAG---CAGCTG..................................................................................................................................................................................................................................................................................................................1811.001100000
............AG---CAGCTGAACCGCTATATCGTGCCA................................................................................................................................................................................................................................................................................................2611.001100000
......................GAACCGCTATATCGTGCCAATTCAATGCC......................................................................................................................................................................................................................................................................................2911.001100000
..........GGAG---CAGCTGAACCGCTATATC......................................................................................................................................................................................................................................................................................................2211.001100000
....GCACAAGGAG---CAGCTGAACCGCTAT.........................................................................................................................................................................................................................................................................................................2511.001000100
.ATAGCACAAGGAG---CAGCTGAAC...............................................................................................................................................................................................................................................................................................................2211.001100000
................................ATCGTGCCAATTCAATGCCA.....................................................................................................................................................................................................................................................................................2011.001100000
.ATAGCACAAGGAG---CAGCTGAACCGCT...........................................................................................................................................................................................................................................................................................................2611.001100000
....GCACAAGGAG---CAGCTGAAC...............................................................................................................................................................................................................................................................................................................1911.001100000
.........AGGAG---CAGCTGAACCGCC...........................................................................................................................................................................................................................................................................................................1820.501000010
droGri2
AATCGCCCAGGGCG---GAGCGGAACCGCTCTACCGTCCCAATTCAATGCCTGGTAAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.....CCCAGGGCG---GAGCGGAACC..............................................................................................................................................................................................................................................................................................................1911.00110
droWil2
AGGAGCGGGAGGGGCTGCAGAACCACCACTTTATAGGACCAATGCAATGCCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................CCACTTTATAGGACCAATGCAATGCC......................................................................................................................................................................................................................................................................................2611.00110000
...........................ACTTTATAGGACCAATGC............................................................................................................................................................................................................................................................................................1811.00110000
................................ATAGGACCAATGCAATGCC......................................................................................................................................................................................................................................................................................1911.00110000
....................AACCACCACTTTATAGGACC.................................................................................................................................................................................................................................................................................................2011.00110000
dp5
CCTAGCCACAGGACCACCGACGGAACCGCTCTATCGCACCAGTGCCATGCAAGGTAAGC------CAATCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................GGAACCGCTCTATCGCACCA................................................................................................................................................................................................................................................................................................2012.0020200000000
..........GGACCACCGACGGAACCGCT...........................................................................................................................................................................................................................................................................................................2012.0020100100000
....GCCACAGGACCACCGACGGAACCGC............................................................................................................................................................................................................................................................................................................2511.0010010000000
.................CGACGGAACCGCTCTATCGCACCAGTG.............................................................................................................................................................................................................................................................................................2711.0011000000000
......................GAACCGCTCTATCGCACCAGT..............................................................................................................................................................................................................................................................................................2111.0010000100000
........CAGGACCACCGACGGAACCGC............................................................................................................................................................................................................................................................................................................2111.0010000100000
...........GACCACCGACGGAACCGCT...........................................................................................................................................................................................................................................................................................................1911.0010000010000
...........GACCACCGACGGAACCGCTCTATCGCA...................................................................................................................................................................................................................................................................................................2711.0010000001000
........CAGGACCACCGACGGAACCGCTCTATC......................................................................................................................................................................................................................................................................................................2711.0010100000000
............ACCACCGACGGAACCGCTCTA........................................................................................................................................................................................................................................................................................................2111.0010100000000
..........................CGCTCTATCGCACCAGTGCCA..........................................................................................................................................................................................................................................................................................2111.0010100000000
..................GACGGAACCGCTCTATCGCACC.................................................................................................................................................................................................................................................................................................2211.0010100000000
droPer2
CA------CAGGACCACCGACGGAACCGCTCTATCGCACTAGTGCCATGCAAGGTAAGC------CATTCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.................CGACGGAACCGCTCTATC......................................................................................................................................................................................................................................................................................................1813.003300000
.......................AACCGCTCTATCGCACTAGT..............................................................................................................................................................................................................................................................................................2011.001010000
..............CACCGACGGAACCGCTCTATC......................................................................................................................................................................................................................................................................................................2111.001100000
droAna3
AATTTCATCAGGACCGCCCACGGAGGCACTTTTCCGAGCTAATTCAATGGCAGGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....CATCAGGACCGCCCACGGAGG...............................................................................................................................................................................................................................................................................................................2111.001100000
....TCATCAGGACCGCCCACGGAGGCAC............................................................................................................................................................................................................................................................................................................2511.001010000
...........GACCGCCCACGGAGGCACTTTTCC......................................................................................................................................................................................................................................................................................................2411.001010000
..............................TTTCCGAGCTAATTCAATGGCAGGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2611.001000001
droBip1
T---TCCTCAGGGCCGCCAACAGAGCCACTCTTCCGAGCTAACTCCATGCCAGGTGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TA--TCCACAGGGCCGATAACTGAGCCTCTGTATAGGACCAATTCCATGCAGGGAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
GATTTCCACTGGACCACAAACCGAGGCGCTCTACAGGAGTAACTCAATACTAGGTAATCATAAGTTAACCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TTCCACCGGTGGTCCGCCAAGCGAGGCGCTCTACAGGTCCAACTCCATGCTAGGTAAGCACG------TGC------------------------------TGTTGCTACTAGAGTTGGGTATTTGGGTCACGAGTTGGTGAATAGA-------CAAGAGTTACTCAT---------------CTTCTTTAAAGTTAACC----TAACCCAAGTG---------------------------------CTTCATTATT-TCTTGTAATTTATGGCACAACCAACTTGGCAAGAATGCAATTAAGTAAGCAAGTTAACACTGCACAGTATSizeHit CountTotal NormTotal
No Reads
droRho1
AATTTCCACCGGACCGCCAACCGAGCCGCTCTACAGGTCCAACTCCATGCTAGGTAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
GATTTCCACCGGACCACCGACCGAACCGCTTTTCAGGAGCAACTCCATGCTAGGTAATTATC------AGA------------------------------TCTTTGCTTAAGAATTTACAA--------------------TTTGAGCACAGGTATGAGTTAATCAT---------------ATTCTTT---------------------------------------------------TTATTTGAAAAATATTACATTTA--------------------------------------AGTTTTTGAGCCAAACTTAC---TAAGSizeHit CountTotal NormTotal
No Reads
droTak1
AATTTCCACCGGACCACCAAGCGAACCACTTTTCAGGAGCAACTCCATGCTAGGTAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
AATTTCAACAGGACCACCAATCGAACCACTTTACAGGGCTAACTCCATGCTTGGTAAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
GATATCTAGCGGACCAGGAACGGAACCAATTTACAGGAATAGCTCCATGTTAGGTAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
GATATCTAGCGGACCAGGAACGGAAC...............................................................................................................................................................................................................................................................................................................26112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102034000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GATATCTAGCGGACCAGGAACGGAACC..............................................................................................................................................................................................................................................................................................................27111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TTTACAGGAATAGCTCCATGTTAGG...................................................................................................................................................................................................................................................................................2517.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000004000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GATATCTAGCGGACCAGGAAC....................................................................................................................................................................................................................................................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000100000000000000000000000000000
...ATCTAGCGGACCAGGAACGGAAC...............................................................................................................................................................................................................................................................................................................2316.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
....TCTAGCGGACCAGGAACGGAACCA.............................................................................................................................................................................................................................................................................................................2415.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
......TAGCGGACCAGGAACGGAACC..............................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000100000000000000000
.......................AACCAATTTACAGGAATAGCTCCATG........................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000100000000
..TATCTAGCGGACCAGGAACG...................................................................................................................................................................................................................................................................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000001000000
.......AGCGGACCAGGAACGGAACC..............................................................................................................................................................................................................................................................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
GATATCTAGCGGACCAGGAACG...................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...ATCTAGCGGACCAGGAACGGAACC..............................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
..TATCTAGCGGACCAGGAACGGAA................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GGAACCAATTTACAGGAATAGCTC............................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000
..TATCTAGCGGACCAGGAACGGAAC...............................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TTACAGGAATAGCTCCATGTTAGG...................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000010000000
............................ATTTACAGGAATAGCTCCATG........................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......AGCGGACCAGGAACGGAACCA.............................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
....TCTAGCGGACCAGGAACGGAACCAAT...........................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TAGCGGACCAGGAACGGA.................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000
....TCTAGCGGACCAGGAACGGAA................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...ATCTAGCGGACCAGGAACGG..................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................ACAGGAATAGCTCCATGTTAGGTAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CGGAACCAATTTACAGGAATAGCT.............................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TAGCGGACCAGGAACGGAACCAATT..........................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....CTAGCGGACCAGGAACGGAACCA.............................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................AATTTACAGGAATAGCTCC...........................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000100000000000
GATATCTAGCGGACCAGGA......................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........CGGACCAGGAACGGAACCAATTT.........................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GCGGACCAGGAACGGAACCA.............................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................AACCAATTTACAGGAATAGCT.............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ACCAATTTACAGGAATAGCTCCATGT.......................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...ATCTAGCGGACCAGGAACGGAACCAATT..........................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GATATCTAGCGGACCAGGAACGGA.................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..................AACGGAACCAATTTACAGGAAT.................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
......................GAACCAATTTACAGGAATAGC..............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..TATCTAGCGGACCAGGAACGGA.................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..............................TTACAGGAATAGCTCCATGTTAGGT..................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................GAATAGCTCCATGTTAGGT..................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..........................CAATTTACAGGAATAGCTCC...........................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.....................................AATAGCTCCATGTTAGGTA.................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.ATATCTAGCGGACCAGGAACG...................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TAGCGGACCAGGAACGGAA................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CCAATTTACAGGAATAGCTC............................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.............................TTTACAGGAATAGCTCCATGT.......................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....CTAGCGGACCAGGAACGGA.................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...ATCTAGCGGACCAGGAACG...................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................AATTTACAGGAATAGCTCCA..........................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GATATCTAGCGGACCAGG.......................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GACCAGGAACGGAACCAAT...........................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........GACCAGGAACGGAACCAATT..........................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TAGCGGACCAGGAACGGAAC...............................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.......AGCGGACCAGGAACGGAAC...............................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................ATTTACAGGAATAGCTCC...........................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
.ATATCTAGCGGACCAGGAACGG..................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................CAGGAATAGCTCCATGTTAGG...................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
........................ACCAATTTACAGGAATAGCTCC...........................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
................................ACAGGAATAGCTCCATGTTAGGT..................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.ATATCTAGCGGACCAGG.......................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................AATTTACAGGAATAGCTCCAT.........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...............................TACAGGAATAGCTCCATGTTA.....................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.....CTAGCGGACCAGGAACGG..................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TTTACAGGAATAGCTCCATGTTAGGT..................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TCTAGCGGACCAGGAACG...................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................TAGCTCCATGTTAGGTAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TATCTAGCGGACCAGGAT.....................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GCGGACCAGGAACGGAACC..............................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............CCAGGAACGGAACCAATTTACAGGAA..................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.........................CCAATTTACAGGAATAGCTCCATGT.......................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TATCTAGCGGACCAGGAACGG..................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GGAACCAATTTACAGGAATAGCTCCATG........................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...ATCTAGCGGACCAGGAAC....................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ACCAATTTACAGGAATAGCTCCATG........................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.............CCAGGAACGGAACCAATTTACAGGAATA................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................AGGAATAGCTCCATGTTAGGT..................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ACCAATTTACAGGAATAGCTC............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
..............................TTACAGGAATAGCTCCAT.........................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
............................ATTTACAGGAATAGCTCCATGTTAGGT..................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...........................AATTTACAGGAATAGCTC............................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TAGCGGACCAGGAACGGAACCAAT...........................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......AGCGGACCAGGAACGGAA................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AATATCTAGCGGACCAGGAACGGAACCAATTTACAGGAATAGCTCCATGTTAGGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
AATATCTAGCGGACCAGGAAC....................................................................................................................................................................................................................................................................................................................2115.00512200000000000000
.ATATCTAGCGGACCAGGAACG...................................................................................................................................................................................................................................................................................................................2112.00202000000000000000
.........CGGACCAGGAACGGAACC..............................................................................................................................................................................................................................................................................................................1812.00200200000000000000
AATATCTAGCGGACCAGGAACGGAACC..............................................................................................................................................................................................................................................................................................................2712.00200200000000000000
.ATATCTAGCGGACCAGGAAC....................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
.....CTAGCGGACCAGGAACGGAACC..............................................................................................................................................................................................................................................................................................................2211.00100100000000000000
.ATATCTAGCGGACCAGGAACGG..................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
......TAGCGGACCAGGAACGGAAC...............................................................................................................................................................................................................................................................................................................2011.00100100000000000000
droSec2
GATATCTAGCGGACCAGGAACGGAACCAATTTACAGGAATAGCTCCATGTTAGGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................CGGAACCAATTTACAGGAATAGCTCC...........................................................................................................................................................................................................................................................................................2611.0011000
...........................AATTTACAGGAATAGCTC............................................................................................................................................................................................................................................................................................1811.0010010
............................ATTTACAGGAATAGCTCCAT.........................................................................................................................................................................................................................................................................................2011.0010010
..........................CAATTTACAGGAATAGCT.............................................................................................................................................................................................................................................................................................1811.0010001
GATATCTAGCGGACCAGG.......................................................................................................................................................................................................................................................................................................................1811.0011000
GATATCTAGCGGACCAGGAACG...................................................................................................................................................................................................................................................................................................................2211.0010100
droYak3
TA--TCCAGCGGACCAGCAACGGAACCAATTTACAGGAACAGCTCGATGTTAGGTAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........GGACCAGCAACGGAACCAAT...........................................................................................................................................................................................................................................................................................................2012.00201000010000
........GCGGACCAGCAACGGAACC..............................................................................................................................................................................................................................................................................................................1912.00220000000000
..................AACGGAACCAATTTACAGGAACA................................................................................................................................................................................................................................................................................................2311.00101000000000
.............................TTTACAGGAACAGCTCGATGTTAGG...................................................................................................................................................................................................................................................................................2511.00100000010000
........................ACCAATTTACAGGAACAGCTCGATG........................................................................................................................................................................................................................................................................................2511.00100000010000
...........GACCAGCAACGGAACCAATTTACAGGA...................................................................................................................................................................................................................................................................................................2711.00101000000000
.A--TCCAGCGGACCAGCAACGG..................................................................................................................................................................................................................................................................................................................2011.00101000000000
...............................TACAGGAACAGCTCGATGTTA.....................................................................................................................................................................................................................................................................................2111.00100000010000
.................................CAGGAACAGCTCGATGTTAGGC..................................................................................................................................................................................................................................................................................2211.00100100000000
.......................AACCAATTTACAGGAACAGCTCGATGTTA.....................................................................................................................................................................................................................................................................................2911.00100000010000
............................ATTTACAGGAACAGCTCGATGTTAGGC..................................................................................................................................................................................................................................................................................2711.00100000010000
.....CCAGCGGACCAGCAACGGAACCA.............................................................................................................................................................................................................................................................................................................2311.00110000000000
............................ATTTACAGGAACAGCTCGATG........................................................................................................................................................................................................................................................................................2111.00100000010000
...........................AATTTACAGGAACAGCTCGATGTTAGGC..................................................................................................................................................................................................................................................................................2811.00100000010000
.............................TTTACAGGAACAGCTCGAT.........................................................................................................................................................................................................................................................................................1911.00100000010000
...........GACCAGCAACGGAACCAATTTACAG.....................................................................................................................................................................................................................................................................................................2511.00101000000000
..............................TTACAGGAACAGCTCGATGTTAGG...................................................................................................................................................................................................................................................................................2411.00100000010000
droEre2
GATATCCACCGGTCCAGTAACGGAACCAATTTACAGGAACAGCTCCATGTTAGGTAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................AACCAATTTACAGGAACAGCTC............................................................................................................................................................................................................................................................................................2211.0011000000
................GTAACGGAACCAATTTACAGG....................................................................................................................................................................................................................................................................................................2111.0011000000
............................ATTTACAGGAACAGCTCCATGTTAGGT..................................................................................................................................................................................................................................................................................2711.0010000100
............................ATTTACAGGAACAGCTCCATGTT......................................................................................................................................................................................................................................................................................2311.0010000100
...............................TACAGGAACAGCTCCATGTTAG....................................................................................................................................................................................................................................................................................2211.0010000100
...............AGTAACGGAACCAATTTACAGGAAC.................................................................................................................................................................................................................................................................................................2511.0010100000
.....................GGAACCAATTTACAGGAACAGCTCC...........................................................................................................................................................................................................................................................................................2511.0010000100
..................AACGGAACCAATTTACAGGAACAG...............................................................................................................................................................................................................................................................................................2411.0010000100
............................ATTTACAGGAACAGCTCCATG........................................................................................................................................................................................................................................................................................2111.0010000100
..............CAGTAACGGAACCAATTTACAGG....................................................................................................................................................................................................................................................................................................2311.0010000100

Generated: 05/16/2015 at 08:18 PM