ID:

dvi_6976

 Coordinate:

scaffold_12875:14858332-14858482 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-25.1 -25.0 -25.0

Flybase annnotation

CDS [Dvir\GJ22126-cds]; exon [dvir_GLEANR_7438:9]; intron [Dvir\GJ22126-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TTAACTTCTTTTTGTTTTGTGTATATTTCATTTCCATTTCGGTCGCAGTCGTGCCAACTGTCGAAAGTTTCCGTTTAAACAATTCGTGAAGCCCTGGCAACGCTGTGCCTAAACCATAATCGCAGCTTATCTCATAACATTCGCTGCCAAATGCGCCTTGACACTTGTTTATCGCTAATTGGGCTTATTTTTAAATTGCAGCAAGGGTATTACGATCTGAACTACACGCCCACCAGCCTGGGCGCCGGACG
**************************************************.(((.......((((.((((......))))..))))..((((((.((((......))))............(((((..((........))..))))).....(((....(((....)))...))).....))))))...........))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 GSM1528803
follicle cells		 M028
head
 SRR060663
160_0-2h_embryos_total
 SRR060687
9_0-2h_embryos_total
 SRR1106720
embryo_8-10h
 SRR1106728
larvae
 SRR060689
160x9_testes_total
 V047
embryo
 M027
male body		 SRR060682
9x140_0-2h_embryos_total
 SRR060666
160_males_carcasses_total
 SRR060686
Argx9_0-2h_embryos_total
........................ATTTCATTTCCATTTCGGTCG.............................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................GTATTACGATCTGAACTACACGCC..................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................GACACTTGTTTATCGCTAATTGGGCTTATTTTTAAATTGCAG.................................................. 42 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................ACTACACGCCCACCAGCCTGG.......... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................ATTACGATCTGAACTACAC........................ 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................ACTACACGCCCACCAGCCTG........... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................TTTCATTTCCATTTCGGT................................................................................................................................................................................................................ 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................GTATTACGATCTGAACTACACGCCC.................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................ATTACGATCTGAACTA........................... 16 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................GCGTATTACGATCTGAACCG........................... 20 3 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0 0 0
........................................................................................................................................................................................................GCAAGGGTATCATGATCTGAAT............................. 22 3 5 0.20 1 0 0 0 0 0 0 0 1 0 0 0 0 0
...................................AATTCGGTCGCAGCCGTG...................................................................................................................................................................................................... 18 2 6 0.17 1 0 0 0 0 0 0 0 0 0 1 0 0 0
.........................................................................................................................................................................................................CAAGGGTATCATGATCTG................................ 18 2 7 0.14 1 0 0 0 0 0 0 0 1 0 0 0 0 0
......................................................................CCCTTGAAACAATTCGTCAA................................................................................................................................................................. 20 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 1 0 0
......................................................................................................................................................................................................................ATCTGATCTACGCGCCCTC.................. 19 3 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 1 0
........TTTATGTTTAGTGTATATT................................................................................................................................................................................................................................ 19 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

AATTGAAGAAAAACAAAACACATATAAAGTAAAGGTAAAGCCAGCGTCAGCACGGTTGACAGCTTTCAAAGGCAAATTTGTTAAGCACTTCGGGACCGTTGCGACACGGATTTGGTATTAGCGTCGAATAGAGTATTGTAAGCGACGGTTTACGCGGAACTGTGAACAAATAGCGATTAACCCGAATAAAAATTTAACGTCGTTCCCATAATGCTAGACTTGATGTGCGGGTGGTCGGACCCGCGGCCTGC
**************************************************.(((.......((((.((((......))))..))))..((((((.((((......))))............(((((..((........))..))))).....(((....(((....)))...))).....))))))...........))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060681
Argx9_testes_total
 M027
male body		 SRR060663
160_0-2h_embryos_total
 V047
embryo
 M047
female body
 SRR1106729
mixed whole adult body
...........................................................CAGCATTCACAGGCAACTTTG........................................................................................................................................................................... 21 3 2 1.00 2 0 2 0 0 0 0
............................................AGTCAGCACGGTTGACAGCTTT......................................................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.............................................................................................................................................GCGATGGTTGACGCGGAAC........................................................................................... 19 2 4 0.25 1 0 0 1 0 0 0
....................................................................................................................................................................................................................GCTAGACTCGATATGGGGG.................... 19 3 16 0.13 2 1 0 0 0 1 0
.....................................................................................................................................................................................................CGTCGGTCCCATAACGGTAG.................................. 20 3 10 0.10 1 0 0 0 1 0 0
................................................................................TTAGGCACTTCTGGACTGT........................................................................................................................................................ 19 3 20 0.05 1 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12875:14858282-14858532 + dvi_6976 TTAACTT-CTTTTTGTTTTGTGTAT-------------------------------------ATTTCATTT----CC-ATTTCG--GTCGCAGTCGTGCCAAC-TGTCGAAAG-----------------------TTTCCG--------TTTA-AACAA-TTCGTGAAGCCCTGGCAACG-------------------------------------------------CT--GT--GCCTA-A--A-----CCATAATC------G----------------CAGCTTATCTCA--T---AA----C--ATTCG--CTG-----------------CCAAATGCGCCTTGACACTTG-------------------------TTTATCG----CTAATTGGGCTTAT-------------------TTTTAAATTGCAGCAAGGGTATTACGATCTGAACTACACGCCCACCAGCCTGGGC---GCCGGACG
droMoj3 scaffold_6496:7035849-7036137 - TTCATTT-T----------------------TTTTTTTCATTTATTT---------TATTTTTTTTTTTTTT--------TTTG--TGCGCAGTTCC--------GTGTT---------------------------------------------------------------------AGCTGCTTGTGTTTTGACAAACAATTTTTTGTTGTTTTTGCCCTGGCAACGCGCTCT--GCCTA-A--A-----CCATTATC------G----------------CAGCTTAACTCACATCATTATTCAC--A--TTTGCTGTCCAGTTGGGGACGA--AGTG-----------CAGCGCCTTAAC-------------------------A----CTAATTGTGATTATTTGCATTCTTATTT-----CGTTGACTTACAGCAAGGATATTACGATCTGAACTACACGCCCACCAGCCTGGGC---GCCGGTCG
droGri2 scaffold_15245:14880394-14880694 + TATATAA----------TTGTGTATTATAATTTTTTTTTATTTGTTT---------TTTTTTTTTTT-ATAATTTCT-GTTTCG--CACACAGCATTGCCAGTCGCCGCCGGC----------------------------AAGTTTGTGCTGAGAACTTTTTCGAGATGCGCTGGCAACG-------------------------------------------------CT--GT--AACGCCTTAACTCCATAACCATT------T--------CATTATCGCAGCTTATCTCGCATAACA-------------------------------------------------ATTACGCATTGACCAATGTTCTTTGGAATCTTTTCGTTGGCTAATGTATA---TTC--------------------TTTTGACTTGCAGCAAGGCTATTATGATCTGAACTACACGTCACCCAGCTTGAAT---GCTGGCCG
droWil2 scf2_1100000004954:2313672-2313886 - TTTGCTT-T-------------------------GTTTTTTGTGCGC---------AAAACGGGTTT--GCCAGACT-GACTGT--CATATATTTTCA------------------------------TCACAGTT-------------------------------ACAGTCGGGCAAAGCTGCTTTTATATTCACCAACAATTTTATG-------------------------------------------------------------CATCTA-------------------------A-----------AT--T-------------------TCA-----AATACGAT---GA------------------------------------TTTAAT-------------TCCTAACATGTTTGATTACCGTTGCAGCAAGGATATTACGATTTGAACTACACACCAACTAGCTTGGGC---GCTGGTCG
dp5 3:5587816-5588067 + TCAAATG-C-----------------------------------------------------GCTTTGAGGCGGTCC-GACCCG--CACACAGCTTTGCCAAACTATACAGAT-----------------------TTCACGGATTTGATCTTGATCCAATTGCACAAAAGTCTGGTAAAG-------------------------------------------------CT--GC--GTCGC-GTCAT----CGGCCATC------GGGCCACTTA-------------------------AACA--G--ACTCG--ATT---------------CTCCTACTCAGCCTCGACGGCCG------------------------------------GCTAAT-------------TTTGTGTGTGTTTTGTGTCGATTGCAGCAGGGATATTACGATCTGAACTACACGCCAACCAGCCTGGGA---GCGGGACG
droPer2 scaffold_2:5782469-5782738 + TTTTTTT-T----------------------CCATT----TCCATTC---------AAATGCGCTTTGAGGCGGTCC-GACCCG--CACACAGCTTTGCCAAACTATACAGAT-----------------------TTCACGGATTTGATCTTGATCCAATTGCACAAAAGTCTGGTAAAG-------------------------------------------------CT--GC--GTCGC-GTCAT----CGGCCATC------GGGCCACTTA-------------------------AACA--G--ACTCG--ATT---------------CTCCTACTCAGCCTCGACGGCCG------------------------------------GCTAAT-------------TTTGTGTGTGTTTTGTGTCGATTGCAGCAGGGATATTACGATCTGAACTACACGCCAACCAGCCTGGGA---GCGGGACG
droAna3 scaffold_13266:16280105-16280252 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGATCTGGCAAAG-------------------------------------------------CT--TC--GCCTC-CTTATTTCACAGCCATC------G--------C-------------------------A-ACCACAAA--CA--A-------------------AGTGCT--CTCTTGCCGGCCA------------------------------------CCTAACAA-TCTC--------------------TTCTCCTTTGCAGCAAGGATACTATGATCTGAACTACCCGCCAGCCAGTTTGGGC---GCCGGTCG
droBip1 scf7180000395838:181551-181693 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGATCTGGCAAAG-------------------------------------------------CT--CC--GCCTC-TTAATTTCACAGCCATC------G--------C-------------------------A-ACCAC--A--AG--C-------------------GCTGCT--CCCTTGCCGGCAA------------------------------------CTCAACAT----T--------------------CTCTTCTTTACAGCAAGGATACTACGATCTGAACTACCCGCCAGCCAGCCTGGGC---GCCGGTCG
droKik1 scf7180000302471:588847-588965 + TTATC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATT------T----------------------------------AACACAC--A--CG--A-------------------CCTGCG--CTCTAGATGATCG-------------------------CTTATTT----ATGATTCGG---G--------------------TTCTTCTTTGCAGCAGGGATATTACGACCTAAACTATCCACCAGCCAGTTTAGGC---ACCGGTCG
droFic1 scf7180000453215:240300-240566 - TTAACTT-ATATTTGACTTGTGTAT---ACATTTAATGCATTTAACT---------AATCATACTTATATTTGTTTGGAATCAT--CAAGCGGCTTTGACAGACTTTACTGAACGCTACGAGTT-GTTTCAAGCCA-------------------------------AAGGTCTGGCAAAG-------------------------------------------------CT--GC--ATTCA-TTCATTTCACAGCCATT------G--------A--------------------------AAACAC--A--CT--A-------------------CCTGCT--CCCTTAATGCTAA------------------------------------CTTAATGTGTTTC--------------------TTCTTGGTTGCAGCAAGGATATTACGATCTGAATTATCCGCCAGCCAGTTTGGGA---GCTGGACG
droEle1 scf7180000491258:55641-55910 - TTGTTTTTTTATCTGACTTGTGTAT---ACAATCATTGCATTTAATTGAACACATTAAACACGTTTCATTTCGTTTGGCAACGG--CACACAGCTTCGCCCGACTGGATAGAA------------------AGCTC-------------------------------GCAGACTGGCAAAG-------------------------------------------------CT--GC--GTCCG-ATATCTTCACAGTCACAGTCATTG-----TTAA-------------------------CACACAC--A--CA--A-------------------TCCACT--TCCTAAATGGCAA------------------------------------CTTAATGTGATTC--------------------CTTTCGATTACAGCAGGGATACTACGACCTGAACTATCCGCCAGCCAGTTTGGGA---GCTGGACG
droRho1 scf7180000770177:48477-48732 + TCAACT------------TGTGTAT---AAATTTATTGCATTTAATT---------AAACATGTTTCATTTCGTTTGGAATTGG--CACGCAGCTTTGCTAGACTGGACAGAACGCTTCGTATT-GTTGCAAGCTC-------------------------------AAAGTCTGGCAAAG-------------------------------------------------CT--GT--TTCTG-ATTTCTTCACAGCCATT------T--------T-------------------------A-GACAC--A--CA--A-------------------TCTACT--CCCTTGATGGCTA------------------------------------CTTAATGTAATTA--------------------TTTTTGGTTGCAGCAGGGATACTACGATCTAAACTATCCGCCAGCCAGTTTAGGA---GCTGGACG
droBia1 scf7180000302291:1818006-1818250 + TTAGA------------------------AATTTATTGCATTTAATT---------AAAAATATTTCATTTCGTTTGTAATCGG--C-CGTAGCTTTGTCAGACCATGCACGC---TCCCAGTTTTTTTTAAGTCT-------------------------------ATAGTCTGACAAAG-------------------------------------------------GG--GC--ATCCG-TCATCTTCACAGCCATT------T--------T-------------------------AACACAC--A--CA--A-------------------TCTGCT--CCCTTAATGGCAA------------------------------------CTTAATGTGAATA--------------------TTCTCGTTTGCAGCAGGGATACTACGATCTGAACTATCCGCCGGCCAGTTTAGGA---GCTGGACG
droTak1 scf7180000415088:145507-145562 - T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCAGCAGGGATATTACGATCTGAACTATCCGCCGGCCAGTTTAGGA---GCTGGACG
droEug1 scf7180000409474:2795256-2795487 + ATAA--------------------------ATTTATTGCATTTACTT---------AAACATATTTCATTTCGTTTGGGATGGG--CACGTAACTTTTTCAGACCTTGCAGGA------------------TGCTT-------------------------------AAAGTCTGACAAAG-------------------------------------------------TT--GG--GTCCA-TCGTCTTCACAGCCATT------A--------T-------------------------AACACAA--A--CT--A-------------------TCTGCT--ACGTTGATAACAT------------------------------------ATTAATTTAATTA--------------------TTTTTGGTTGCAGCAAGGGTATTACGATCTGAACTATCCGCCGGCCAGTTTAGGAACTGCTGGACG
dm3 chr2R:3962770-3963027 + CTGACT------------AATGTAT---AAATTTCTTACATTGAACA---------TAACGTATTTCATTTTGTT-GAAACTGGTACACGTGGTTTTGTCAGACCTTTATCACATATTTATTTT-GTTTCGGT-------------------------------AAGAAGTTCTGACAAAG-------------------------------------------------TG--ATCCGTTCA-TCATCTTCACAGCCATA------------------------------------------ACACGC--C--CA--G-------------------AATGCT--CGCGTGAAGACGA--------A---------------------------CCTAATGCTATAA--------------------TTCTCAATTGCAGCAGGGATATTACGATCTGAACTATCCGCCGGCCAGTTTAGGA---GCTGGACG
droSim2 2r:4785914-4785976 + T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCAATTGCAGCAAGGATACTACGATCTGAACTATCCGCCGGCCAGTTTAGGA---GCTGGACG
droSec2 scaffold_1:1606750-1606812 + T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCAATTGCAGCAAGGATATTACGATCTAAACTATCCGCCGGCCAGTTTAGGA---GCTGGACG
droYak3 2L:16619448-16619510 + T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCAATTGCAGCAGGGATATTACGATTTGACCTATCCGCCGCCCAGTTTAGGA---GCTGGACG
droEre2 scaffold_4929:18665703-18665769 - CTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--------------------TTCTCACTTGCAGCAGGGATATTACGATCTTAACTATCCGCCGGCCAGTTTAGGA---GCTGGACG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TTAACTT-CTTTTTGTTTTGTGTAT-------------------------------------ATTTCATTT----CC-ATTTCG--GTCGCAGTCGTGCCAAC-TGTCGAAAG-----------------------TTTCCG--------TTTA-AACAA-TTCGTGAAGCCCTGGCAACG-------------------------------------------------CT--GT--GCCTA-A--A-----CCATAATC------G----------------CAGCTTATCTCA--T---AA----C--ATTCG--CTG-----------------CCAAATGCGCCTTGACACTTG-------------------------TTTATCG----CTAATTGGGCTTAT-------------------TTTTAAATTGCAGCAAGGGTATTACGATCTGAACTACACGCCCACCAGCCTGGGC---GCCGGACGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............................................................ATTTCATTT----CC-ATTTCG--GTCG....................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTACGATCTGAACTACACGCC........................2411.001000000000000010000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................GACACTTG-------------------------TTTATCG----CTAATTGGGCTTAT-------------------TTTTAAATTGCAG.....................................................4211.001000000000000000000000000000000000000000000000000100000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTACACGCCCACCAGCCTGG.............2111.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTACGATCTGAACTACAC...........................1911.001000000000000000000000000000000000000010000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTACACGCCCACCAGCCTG..............2011.001001000000000000000000000000000000000000000000000000000000000000
...............................................................TTTCATTT----CC-ATTTCG--GT......................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTACGATCTGAACTACACGCCC.......................2511.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTACGATCTGAACTA..............................1611.001000000000000000000000000000000000000000000000000000000001000000
droMoj3
TTCATTT-T----------------------TTTTTTTCATTTATTT---------TATTTTTTTTTTTTTT--------TTTG--TGCGCAGTTCC--------GTGTT---------------------------------------------------------------------AGCTGCTTGTGTTTTGACAAACAATTTTTTGTTGTTTTTGCCCTGGCAACGCGCTCT--GCCTA-A--A-----CCATTATC------G----------------CAGCTTAACTCACATCATTATTCAC--A--TTTGCTGTCCAGTTGGGGACGA--AGTG-----------CAGCGCCTTAAC-------------------------A----CTAATTGTGATTATTTGCATTCTTATTT-----CGTTGACTTACAGCAAGGATATTACGATCTGAACTACACGCCCACCAGCCTGGGC---GCCGGTCGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGAACTACACGCCCACC....................2011.001000010
....................................................................................................................................................................................................................GTTTTTGCCCTGGCAACGCGCTCT--GC..............................................................................................................................................................................................................................................................2611.001000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTACACGCCCACCAGCCTG..............2211.001100000
....................................................................................................................................................................................GCTGCTTGTGTTTTGACAAACAA...................................................................................................................................................................................................................................................................................................2311.001010000
droGri2
TATATAA----------TTGTGTATTATAATTTTTTTTTATTTGTTT---------TTTTTTTTTTT-ATAATTTCT-GTTTCG--CACACAGCATTGCCAGTCGCCGCCGGC----------------------------AAGTTTGTGCTGAGAACTTTTTCGAGATGCGCTGGCAACG-------------------------------------------------CT--GT--AACGCCTTAACTCCATAACCATT------T--------CATTATCGCAGCTTATCTCGCATAACA-------------------------------------------------ATTACGCATTGACCAATGTTCTTTGGAATCTTTTCGTTGGCTAATGTATA---TTC--------------------TTTTGACTTGCAGCAAGGCTATTATGATCTGAACTACACGTCACCCAGCTTGAAT---GCTGGCCGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
TTTGCTT-T-------------------------GTTTTTTGTGCGC---------AAAACGGGTTT--GCCAGACT-GACTGT--CATATATTTTCA------------------------------TCACAGTT-------------------------------ACAGTCGGGCAAAGCTGCTTTTATATTCACCAACAATTTTATG-------------------------------------------------------------CATCTA-------------------------A-----------AT--T-------------------TCA-----AATACGAT---GA------------------------------------TTTAAT-------------TCCTAACATGTTTGATTACCGTTGCAGCAAGGATATTACGATTTGAACTACACACCAACTAGCTTGGGC---GCTGGTCGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTACACACCAACTAGCTTG..............2011.00100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTACACACCAACTAGC.................2111.00110000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGATATTACGATTTGAACT...............................2111.00110000
.........................................................................................ATATTTTCA------------------------------TCACAGTT-------------------------------ACAGTCGGGC.............................................................................................................................................................................................................................................................................................................................2711.00100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTTTGATTACCGTTGCAGCAAGGA...............................................2611.00100010
...........................................................................................ATTTTCA------------------------------TCACAGTT-------------------------------ACAGTCGGG..............................................................................................................................................................................................................................................................................................................................2411.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................CCTAACATGTTTGATTACCGTTGCA......................................................2511.00100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGGATATTACGATTT....................................1811.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATTACGATTTGAAC................................1911.00100001
dp5
TCAAATG-C-----------------------------------------------------GCTTTGAGGCGGTCC-GACCCG--CACACAGCTTTGCCAAACTATACAGAT-----------------------TTCACGGATTTGATCTTGATCCAATTGCACAAAAGTCTGGTAAAG-------------------------------------------------CT--GC--GTCGC-GTCAT----CGGCCATC------GGGCCACTTA-------------------------AACA--G--ACTCG--ATT---------------CTCCTACTCAGCCTCGACGGCCG------------------------------------GCTAAT-------------TTTGTGTGTGTTTTGTGTCGATTGCAGCAGGGATATTACGATCTGAACTACACGCCAACCAGCCTGGGA---GCGGGACGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTACGATCTGAACTACACGC.........................2112.0020100000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTACACGCCAACCAGCCTGGA............2211.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTTTTGTGTCGATTG........................................................1911.0010000100000
...............................................................................................................................................................................................................................................................................CACTTA-------------------------AACA--G--ACTCG--ATT---------------CTCCTACTC.....................................................................................................................................................2811.0010010000000
.......................................................................................................................................................TTGATCCAATTGCACAAAAGT..................................................................................................................................................................................................................................................................................................................................2111.0010100000000
............................................................................................................CAGAT-----------------------TTCACGGATTTGATCTTGATC.................................................................................................................................................................................................................................................................................................................................................2611.0010000010000
........................................................................GGTCC-GACCCG--CACACAGC................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACTACACGCCAACCAGCCTGGGA---........2611.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTTTGTGTCGATTGCAGA....................................................2011.0010000100000
.....................................................................................................................................................................CAAAAGTCTGGTAAAG-------------------------------------------------CT--GC--G...............................................................................................................................................................................................................................................................2111.0010000000010
...........................................................................................................ACAGAT-----------------------TTCACGGATTTGA.........................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATCTGAACTACACGCCAAC.....................2111.0010000000010
...........................................................................................................................................................................TCTGGTAAAG-------------------------------------------------CT--GC--GTCGC-..........................................................................................................................................................................................................................................................1911.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGATCTGAACTACACGCCAACCAGCC................2811.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACGATCTGAACTACACGCC........................2111.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAACCAGCCTGGGA---GCGGG...2011.0010100000000
droPer2
TTTTTTT-T----------------------CCATT----TCCATTC---------AAATGCGCTTTGAGGCGGTCC-GACCCG--CACACAGCTTTGCCAAACTATACAGAT-----------------------TTCACGGATTTGATCTTGATCCAATTGCACAAAAGTCTGGTAAAG-------------------------------------------------CT--GC--GTCGC-GTCAT----CGGCCATC------GGGCCACTTA-------------------------AACA--G--ACTCG--ATT---------------CTCCTACTCAGCCTCGACGGCCG------------------------------------GCTAAT-------------TTTGTGTGTGTTTTGTGTCGATTGCAGCAGGGATATTACGATCTGAACTACACGCCAACCAGCCTGGGA---GCGGGACGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATCTGAACTACACGCCAACCAGCCT...............2713.003300000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTACGATCTGAACTACACGCC........................2212.002200000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGATCTGAACTACACGCC........................2012.002200000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGGGATATTACGATCTG...................................1911.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATTACGATCTGAACTACACGCC........................2511.001100000
...........................................................................................................................................................................TCTGGTAAAG-------------------------------------------------CT--GC--GTCGC-GTC.......................................................................................................................................................................................................................................................2211.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATCTGAACTACACGCCAACC....................2211.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTTTGTGTCGATTGCAGC....................................................2111.001000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGATCTGAACTACACGCCAACC....................2311.001100000
droAna3
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGATCTGGCAAAG-------------------------------------------------CT--TC--GCCTC-CTTATTTCACAGCCATC------G--------C-------------------------A-ACCACAAA--CA--A-------------------AGTGCT--CTCTTGCCGGCCA------------------------------------CCTAACAA-TCTC--------------------TTCTCCTTTGCAGCAAGGATACTATGATCTGAACTACCCGCCAGCCAGTTTGGGC---GCCGGTCGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATACTATGATCTGAACTACCCGCC........................2611.001010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTATGATCTGAACTACCCGCC........................2211.001000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTATGATCTGAACTACCCGCC........................2411.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTACCCGCCAGCCAGTTTGGGC---........2511.001010000
droBip1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGATCTGGCAAAG-------------------------------------------------CT--CC--GCCTC-TTAATTTCACAGCCATC------G--------C-------------------------A-ACCAC--A--AG--C-------------------GCTGCT--CCCTTGCCGGCAA------------------------------------CTCAACAT----T--------------------CTCTTCTTTACAGCAAGGATACTACGATCTGAACTACCCGCCAGCCAGCCTGGGC---GCCGGTCGSizeHit CountTotal NormTotal
No Reads
droKik1
TTATC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATT------T----------------------------------AACACAC--A--CG--A-------------------CCTGCG--CTCTAGATGATCG-------------------------CTTATTT----ATGATTCGG---G--------------------TTCTTCTTTGCAGCAGGGATATTACGACCTAAACTATCCACCAGCCAGTTTAGGC---ACCGGTCGSizeHit CountTotal NormTotal
No Reads
droFic1
TTAACTT-ATATTTGACTTGTGTAT---ACATTTAATGCATTTAACT---------AATCATACTTATATTTGTTTGGAATCAT--CAAGCGGCTTTGACAGACTTTACTGAACGCTACGAGTT-GTTTCAAGCCA-------------------------------AAGGTCTGGCAAAG-------------------------------------------------CT--GC--ATTCA-TTCATTTCACAGCCATT------G--------A--------------------------AAACAC--A--CT--A-------------------CCTGCT--CCCTTAATGCTAA------------------------------------CTTAATGTGTTTC--------------------TTCTTGGTTGCAGCAAGGATATTACGATCTGAATTATCCGCCAGCCAGTTTGGGA---GCTGGACGSizeHit CountTotal NormTotal
No Reads
droEle1
TTGTTTTTTTATCTGACTTGTGTAT---ACAATCATTGCATTTAATTGAACACATTAAACACGTTTCATTTCGTTTGGCAACGG--CACACAGCTTCGCCCGACTGGATAGAA------------------AGCTC-------------------------------GCAGACTGGCAAAG-------------------------------------------------CT--GC--GTCCG-ATATCTTCACAGTCACAGTCATTG-----TTAA-------------------------CACACAC--A--CA--A-------------------TCCACT--TCCTAAATGGCAA------------------------------------CTTAATGTGATTC--------------------CTTTCGATTACAGCAGGGATACTACGACCTGAACTATCCGCCAGCCAGTTTGGGA---GCTGGACGSizeHit CountTotal NormTotal
No Reads
droRho1
TCAACT------------TGTGTAT---AAATTTATTGCATTTAATT---------AAACATGTTTCATTTCGTTTGGAATTGG--CACGCAGCTTTGCTAGACTGGACAGAACGCTTCGTATT-GTTGCAAGCTC-------------------------------AAAGTCTGGCAAAG-------------------------------------------------CT--GT--TTCTG-ATTTCTTCACAGCCATT------T--------T-------------------------A-GACAC--A--CA--A-------------------TCTACT--CCCTTGATGGCTA------------------------------------CTTAATGTAATTA--------------------TTTTTGGTTGCAGCAGGGATACTACGATCTAAACTATCCGCCAGCCAGTTTAGGA---GCTGGACGSizeHit CountTotal NormTotal
No Reads
droBia1
TTAGA------------------------AATTTATTGCATTTAATT---------AAAAATATTTCATTTCGTTTGTAATCGG--C-CGTAGCTTTGTCAGACCATGCACGC---TCCCAGTTTTTTTTAAGTCT-------------------------------ATAGTCTGACAAAG-------------------------------------------------GG--GC--ATCCG-TCATCTTCACAGCCATT------T--------T-------------------------AACACAC--A--CA--A-------------------TCTGCT--CCCTTAATGGCAA------------------------------------CTTAATGTGAATA--------------------TTCTCGTTTGCAGCAGGGATACTACGATCTGAACTATCCGCCGGCCAGTTTAGGA---GCTGGACGSizeHit CountTotal NormTotal
No Reads
droTak1
T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCAGCAGGGATATTACGATCTGAACTATCCGCCGGCCAGTTTAGGA---GCTGGACGSizeHit CountTotal NormTotal
No Reads
droEug1
ATAA--------------------------ATTTATTGCATTTACTT---------AAACATATTTCATTTCGTTTGGGATGGG--CACGTAACTTTTTCAGACCTTGCAGGA------------------TGCTT-------------------------------AAAGTCTGACAAAG-------------------------------------------------TT--GG--GTCCA-TCGTCTTCACAGCCATT------A--------T-------------------------AACACAA--A--CT--A-------------------TCTGCT--ACGTTGATAACAT------------------------------------ATTAATTTAATTA--------------------TTTTTGGTTGCAGCAAGGGTATTACGATCTGAACTATCCGCCGGCCAGTTTAGGAACTGCTGGACGSizeHit CountTotal NormTotal
No Reads
dm3
CTGACT------------AATGTAT---AAATTTCTTACATTGAACA---------TAACGTATTTCATTTTGTT-GAAACTGGTACACGTGGTTTTGTCAGACCTTTATCACATATTTATTTT-GTTTCGGT-------------------------------AAGAAGTTCTGACAAAG-------------------------------------------------TG--ATCCGTTCA-TCATCTTCACAGCCATA------------------------------------------ACACGC--C--CA--G-------------------AATGCT--CGCGTGAAGACGA--------A---------------------------CCTAATGCTATAA--------------------TTCTCAATTGCAGCAGGGATATTACGATCTGAACTATCCGCCGGCCAGTTTAGGA---GCTGGACGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGATATTACGATCTGAACTA..............................21117.001700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000401300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGATATTACGATCTGAAC................................1916.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTACGATCTGAACTATCCGCCGGC.....................2616.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGATCTGAACTATCCGCCGGCCAGT.................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGATCTGAACTATCCGCCGGCCAGT.................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTACGATCTGAACTATCCGCCGGCC....................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGATATTACGATCTGAACTA..............................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTACGATCTGAACTATCCGCCG.......................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000001000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGATCTGAACTATCCGCCGGCC....................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGGGATATTACGATCTGAACT...............................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGAACTATCCGCCGGCCAGTTTAGGA---........2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................C--C--CA--G-------------------AATGCT--CGCGTGAAGA..........................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGGGATATTACGATCTGAACTATC............................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGCCGGCCAGTTTAGGA---GC......2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTACGATCTGAACTATCCGCCGG......................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................TCATTTTGTT-GAAACTGGTAC.......................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATATTACGATCTGAAC................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGCCGGCCAGTTTAG.............1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATTACGATCTGAACT...............................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTACGATCTGAACTATCCG..........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................ACGA--------A---------------------------CCTAATGCTATAA--------------------TTCT..............................................................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................CACGC--C--CA--G-------------------AATGCT--CGCGT...............................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTACGATCTGAACTATCCGCCGGCCAG..................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTACGATCTGAACTATCCGCCGGC.....................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGATATTACGATCTGAACTAT.............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCAGTTTAGGA---GCTGGA..1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................CGC--C--CA--G-------------------AATGCT--CGCGTGA.............................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.....................................................................................................................................................................................................................................................................................................................................................................GA--------A---------------------------CCTAATGCTATAA--------------------TTCTCAATTG........................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGATATTACGATCTGA..................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACGATCTGAACTATCCGCCGGCCA...................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...........................................................................................................................................................................................................................................................................................................................A--G-------------------AATGCT--CGCGTGAAGACG........................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATATTACGATCTGAACTAT.............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACGATCTGAACTATCCGCC........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................GACGA--------A---------------------------CCTAATGCTATAA--------------------TT................................................................2111.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTATCCGCCGGCCAGTTTAGGA---GC......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTACGATCTGAACTATCCGC.........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCCGGCCAGTTTAGGA---G.......1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTACGATCTGAACTATCC...........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................ACGA--------A---------------------------CCTAATGCTATAA--------------------TT................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................AATGCT--CGCGTGAAGACGA--------A---------------------------CC.................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCCGCCGGCCAGTTTAGGA---GCTG....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGATCTGAACTATCCGCC........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................GC--C--CA--G-------------------AATGCT--CGCGTGAAGACG........................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
............................................................................................................................................................................................................................................................................................................................................................CGTGAAGACGA--------A---------------------------CCTAATGCT..........................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGATATTACGATCTGAACT...............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGGCCAGTTTAGGA---GCTGGACG2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCCGCCGGCCAGTTTAGGA---........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCAGTTTAGGA---GCTGGACG2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTACGATCTGAACTATCCGCC........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGATCTGAACTATCCGCCGGCCA...................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTACGATCTGAACTATCCGC.........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCCGCCGGCCAGTTTA..............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................CGA--------A---------------------------CCTAATGCTATAA--------------------TTCTCAATTGC.......................................................2811.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTACGATCTGAACTATCCGCC........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACGATCTGAACTATCCGCCG.......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACGATCTGAACTATCCGCCGGCCAG..................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................AATGCTATAA--------------------TTCTCAAC..........................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCAATTGCAGCAAGGATACTACGATCTGAACTATCCGCCGGCCAGTTTAGGA---GCTGGACGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGATCTGAACTATCCGCC........................2012.00220000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTACGATCTGAACTATCCGCC........................2312.00210100000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGGATACTACGATCTGAACT...............................2312.00200200000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTACGATCTGAACTATCCGCC........................2212.00201100000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATCTGAACTATCCGCC........................1811.00101000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAGTTTAGGA---GCT.....1511.00100000010000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTATCCGCCGGCCAGTTTAGGA---........2411.00100000000001000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAACTATCCGCCGGCCAGTTTAGGG---........2711.00100100000000000000
droSec2
T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCAATTGCAGCAAGGATATTACGATCTAAACTATCCGCCGGCCAGTTTAGGA---GCTGGACGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGCCGGCCAGTTTAGGA---GC......2211.0010010
droYak3
T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCAATTGCAGCAGGGATATTACGATTTGACCTATCCGCCGCCCAGTTTAGGA---GCTGGACGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
CTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--------------------TTCTCACTTGCAGCAGGGATATTACGATCTTAACTATCCGCCGGCCAGTTTAGGA---GCTGGACGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTACGATCTTAACTATCCGCC........................2211.0010000010

Generated: 05/17/2015 at 05:04 AM