ID:

dvi_6901

 Coordinate:

scaffold_12875:14598374-14598524 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-16.8 -16.8 -16.6

Flybase annnotation

exon [dvir_GLEANR_5709:3]; CDS [Dvir\GJ20264-cds]; intron [Dvir\GJ20264-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AGTTACGTTTTATACAGCATTTCTTTATTTTGCTGCGCTGTGAGCCTTCAATTCAAACTGTAACTGCTACAGCTGGGCTTTAAGTAAATAAAATATCCAAAATATATAGTATTCGCCACTTTTGGAGTATTGTTTCTTGCTAGCTTTTCATCTGTCTTTGTTCATGTGTATAATGCTGCATTTTGTTTTGTATATGTGCAGCCAACATGGAGCAGACGTTGGACGACAGTGCGGCCTTGCTGGATGATATG
*************************************************************(((....((((.((((((.((((.((((((....(((((((.................)))))))...))))))))))..))))...)).))))....))).........******************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 M061
embryo
 V116
male body		 SRR060663
160_0-2h_embryos_total
 GSM1528803
follicle cells		 M027
male body		 SRR060666
160_males_carcasses_total
 SRR060674
9x140_ovaries_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060676
9xArg_ovaries_total
 M028
head
 SRR060657
140_testes_total
 SRR060659
Argentina_testes_total
 SRR060664
9_males_carcasses_total
 SRR060670
9_testes_total
 SRR060671
9x160_males_carcasses_total
 SRR060672
9x160_females_carcasses_total
 SRR060675
140x9_ovaries_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060689
160x9_testes_total
 V047
embryo
 V053
head
..................ATTTCTTTATTTTGCTGCGCTGTGAGC.............................................................................................................................................................................................................. 27 0 1 3.00 3 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................ATTTCTTTATTTTGCTGCGCTGTG................................................................................................................................................................................................................. 24 0 1 2.00 2 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......GTTTTATACAGCATTTCTTT................................................................................................................................................................................................................................. 20 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................AGACGTTGGACGACAGTGCGG................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................CTGTCTTTGTTCATGTGTAT................................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................ATGGTGTTCGCCACTTTTGG.............................................................................................................................. 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........ATACAGCATTTCTTTATTTTGCT......................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................AACTGCTACAGCTGGGCT............................................................................................................................................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................CTTTGTTCATGTGTATAATG............................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
....................................................................................................................................................CATCTGTCTTTGTTCATGTGT.................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TTCGCCACTTTTGGAGTATTGTTTC................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................CATTTCTTTATTTTGCTGCGCTGTGAGC.............................................................................................................................................................................................................. 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................CTGGGCTTTAAGTAAATAA................................................................................................................................................................ 19 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................TTCTTTATTTTGCTGCGCTGTGAG............................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
........................TTATTTTGCTGCGCTGTGA................................................................................................................................................................................................................ 19 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................AGACGTTGGACGACAGTGCGGCCTT............. 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................AGACGTTGGACGACAGTGC................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................GTTTTGTTTTGTATATGTGCAG.................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................ACAGTGCGGCCTTGCTGGATG..... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................AACTGCTACAGCTGGGCTTTAA........................................................................................................................................................................ 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................ACAGCTGGGCTTTAAGTA..................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................ATATGTGCGGCCAACATGGAG....................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................TTTGAGCCTTCAATTCAAACTGTA............................................................................................................................................................................................. 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................CTTCAATTCAAACTGTAACTGCTAC..................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.............................................................................................................................................................................................................CATGGAGCGGGCGTTGGACGA......................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................CTTTTGGAGTATTGTTTCTTG................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................GCTGGGCTTTAAGTAAATAAAATATCC......................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.......................................GATCGCCTTCAATTCAAACTGTA............................................................................................................................................................................................. 23 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................GCTGTGAGCCTTCAATTCAAACTGT.............................................................................................................................................................................................. 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..............................................................................................................................................................................................................ATGGAGCAGACGTTGGACGA......................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................TCAAACTGTAACTGCTACAGCTGGGCC............................................................................................................................................................................ 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................AGCAGACGTTGGACGACAG...................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GCAGACGTTGGACGACAGTGC................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................TGTAACTGCTACAGCTGGGCT............................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...........................TTTTGCTGCGCTGTGAGCC............................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................TGTTTTGTATATGTGCAGCC................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................TGTAACTGCTACAGCTGGGCTT........................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.........................................................CTGTAACTGCTACAGCTGGGCT............................................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................TTTGTTCATGTGTATAATG............................................................................ 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................AGCTGGGCTTTAAGTAAATAAA............................................................................................................................................................... 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................GCTGCGCTGTGAGCCTTCAATT...................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................ACAGTGCGGCCTTGCTGGAT...... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................................TTCGCCACTTTTGGAGTATTGTTTCT.................................................................................................................. 26 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................GTGAGCCTTCAATTCAAAC................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................AACTGAAAGTGCTACTGCTGGG.............................................................................................................................................................................. 22 3 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................TTATTTTGCTGCGCTGTGAAA.............................................................................................................................................................................................................. 21 2 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................TTGGTGGACAGTGAGGCCTT............. 20 3 7 0.14 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TCAATGCAAAATATGTCGTAAAGAAATAAAACGACGCGACACTCGGAAGTTAAGTTTGACATTGACGATGTCGACCCGAAATTCATTTATTTTATAGGTTTTATATATCATAAGCGGTGAAAACCTCATAACAAAGAACGATCGAAAAGTAGACAGAAACAAGTACACATATTACGACGTAAAACAAAACATATACACGTCGGTTGTACCTCGTCTGCAACCTGCTGTCACGCCGGAACGACCTACTATAC
********************************************************************************(((....((((.((((((.((((.((((((....(((((((.................)))))))...))))))))))..))))...)).))))....))).........************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 V116
male body		 SRR060678
9x140_testes_total
 SRR060689
160x9_testes_total
 SRR060681
Argx9_testes_total
 V047
embryo
 SRR060682
9x140_0-2h_embryos_total
 V053
head
.........................................CTCGGAAGTTAAGTTTGACAT............................................................................................................................................................................................. 21 0 1 2.00 2 0 1 1 0 0 0 0 0
................................................................................................................................................................................................................TCTCGTCTGCAACCTGCTGTCA..................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0
.................................ACGCGACACTCGGAAGTTAAG..................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0
..............................CCTACGCGACACTCGGAAG.......................................................................................................................................................................................................... 19 2 2 0.50 1 0 0 0 0 1 0 0 0
................................................................................ATTCATTTATTTGATAGG......................................................................................................................................................... 18 1 3 0.33 1 0 0 0 0 0 1 0 0
TCAATGCAAAATATATCCTAT...................................................................................................................................................................................................................................... 21 3 3 0.33 1 0 0 0 0 0 0 1 0
.....................................................................................................TGTATAACATAAGCAGTGAA.................................................................................................................................. 20 3 20 0.15 3 2 1 0 0 0 0 0 0
.......................................................................................................TATAACATAAGCAGTGAAGA................................................................................................................................ 20 3 15 0.13 2 0 0 0 0 0 0 0 2
....................................................................................................TTGTATAACATAAGCAGTGA................................................................................................................................... 20 3 20 0.10 2 1 0 0 0 0 0 0 1
................................................................................ATTCATCTATTTGATAGG......................................................................................................................................................... 18 2 13 0.08 1 0 0 0 0 0 1 0 0
....................................................................................................TTGTATAACATAAGCAGTGAA.................................................................................................................................. 21 3 13 0.08 1 0 0 0 0 0 0 0 1
.......................................................................................................TATAACATAAGCAGTGAA.................................................................................................................................. 18 2 16 0.06 1 1 0 0 0 0 0 0 0
.......................................CACTGGGAAGTTAAGTATT................................................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 1 0
....................................................................................................TTGTATAACATAAGCAGTG.................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12875:14598324-14598574 - dvi_6901 AGTTACGT-TTTATACAG-CATTTCTTT----ATTTTGCTGCGCTGTGAGC----CTTCAATT-------C--AAACTGTAACTGCTACAGCTGGGCT-TTAA----GTAAATAAAATA-------------TCCAAAATATATAGTATTCGCCAC----------------------------------------TT------TTGGAG--TATTG-------------------------------------TTTCTTGCTAGC--------------TTTTCATCT--------G------------TCT--TTGTTCATGTGTATAATG----------------CTGCATTTT-------GT-TTT---GTAT--------ATGTGCAGCCAACATGGAGCAGACGT---TGGACGACAGTGCGGCCTTGCTGGATGATATG
droMoj3 scaffold_6496:10077215-10077472 - AGTTTACGTTTTATACATCCTCAATTCTCTTTCGTTTGCTGCGCTGTGAGC----CTTTAAGT-------CTGCAACTGTAACTGCTCCAGCTGGGCA-ATCA----GTAAATAAAAGA-------------TCCAAAATATATAGTATACACCAT-------------------------------TA-----TACC-------GGGGGCTTTGATTGCCTT--------------TCTTTCATT-----------------------------------------------------------------GATG-CGTTTATCTGTGTAATT----------------TTGCATTTC-----------AC---TTTTGTC----TACACGCAGCCAACCTGGATAAACCTT---TGGACGACAGCACGGCTCTGCTGGATGACATG
droGri2 scaffold_15245:14606496-14606752 - AGTTACAT-TTTGTATA--ACACACCTC----A----CCTGTGCTGGAAGCTAAACTCAAAAC--------------TGTTGCTGCTGCAGCTGAGCA-TTAACTAAGAAAATAAAATA-------------TCCACAAAATATAGTACTAGCTGGTATTTACTAATGTATACATATATATTCCATAGA-----C-CA------A----------------------------------------------------------------------------------------------TAT-----GGGGCATTTTGTTCACGTTTGTAATT----------------TTACATTTC-------GT---T---ATTT--------GTATGCAGCCAACATGGAGCAGCCAT---CGGATGAGCATATGGCCTTGATGGATGATTTG
droWil2 scf2_1100000004822:2394347-2394595 - ATTAAGCA-TTTGCATT----ATATTCT----C----TGGTCTTTTTTTGAGCAGCTGGAAAATATTAAG-----------TAAATAACTATTAGTAA-TGA------AAAGTAAAGAA--GAAAATAAACGTTCATA------------AATAAC-------------------------------TC-----A-AT----------------TCTCCAAGTCCTTA--------AAGCTAATTTGTG-----------------------------GGGTTTAATTTAATG-----ATGT-----ATG------------------CAA----CT------------CTAATGGAA-----------ACTTTTGTT--------TACTCCAGCCCACACAGAGCGATCTGCAAACGATGACAATGCGCCACTGCTGAACGAAATG
dp5 3:12215729-12215972 + AGACTAGT-TTTATT-GG-CACTATTTT----G----TATCCACTGAAGGAGAAACTGTAATAGATAATA-----------TATCCTTCAACTGGCAA-TTAA----TTAAATAAAACA--AAAA-TTTACCTCCGGA------------TGTTTC---------------------------------GCAAA--CGATTACA----------TAACATAATATTTA--------A---------------------------TT-------------------------------GTTCT-----CCGCCATAGCTAATAAATGTCT--------------C------TATTT--T-------GT-AAA---CTT---------TAACGCAGCCAATATGGAGCGATCGC---CGGACGACAGTGCACCTCTGTTGAACGACTTG
droPer2 scaffold_44:399200-399443 + AGACTAGT-TTTATT-GG-CACTATTTT----G----TATCCACTGAAGGAGAAACTGTAATAGATAATA-----------TATCCTTCAACTGGCAA-TTAA----TTAAATAAAACA--AAAA-TTTACCTCCGGA------------TGTTTC---------------------------------GCAAA--CGATTACA----------TAACATAATATTTA--------A---------------------------TT-------------------------------GTTCT-----CCGCCATAGCTAATACATGTCT--------------C------T-------------------A---TTTTGTAAAATTTAACGCAGCCAATATGGAGCGATCGC---CGGACGACAGTGCACCTCTGTTGAACGACTTG
droAna3 scaffold_13266:10048640-10048865 - AGTTTAAT-ATTATC-TG-AATTACTTT----G----TAACCACTGCAAAAAAATTTGTAAAA------------------CATTCTGCAGCTGGAAA-ACCA----TGAAATAAAAAA--AA-ACTTTACCTCCATA------------TATTGT-------------------------------TC-----T-CT------------------TT-------TGAAATATTTA-TATTTAATTGTTGACGGTATC-------------------------------------------------TTGCTAAACCTTC--------T--------------------------------------AAAT---CTTA--------TCCTTCAGCTAACCTGGAACATCCGT---TTGAGGACAATGCCCCTCTTCTGAACCACATG
droBip1 scf7180000396759:1765963-1766183 - AGTTTAAT-ATTATC-TG-CATTTCTTT----G----TAACGACTGCA-TAAAATTTGTAAAA------------------CATTCTGCAGCTGGCAA-ATCA----TGAAATAAAA----AAACCTATACCTCCATA------------TATAT---------------------------------------T-CT------------------TT-------TGTAATATTTT-CATTTATTAAAAGATTGTATC-------------------------------------------------TTGCTAAACCTTC--------T--------------------------------------ATAT---CTTA--------TACTTCAGCTAACATGGAACATCCGT---TTGAGGATAATGCCCCTCTTCTGAACCACATG
droKik1 scf7180000302476:3363178-3363382 - AGTTAATA-TTTACC-GG-CACTGATTT----G----TATCCTCTGAGAGAGAAACTGTAAAA------------------GATCCTGCAGCTGGCAT-TTCA----TTGAATAAAACTATAGAACTATACCTCCATA------------AACTGT-------------------------------CA-----A-CT------TACAGGCTT----G-------TGCTTTAATTT-TAAT---------------------------------------------------------------------------------------TAATTAATC------------TTGA----------------AA---CTTT--------ATTCCTAGCCAATATGGAGCAGCCGT---TCGAGGAAACTGTGGGCCTA------------
droFic1 scf7180000453948:302746-302974 - AGTTTATT-TTTATT-GG-CACCATTCT----G----TATCCTCTGCGAGGTAAACTGTAATA------------------CATCCTGCAGTTGGCAA-TTCT----TGAAATAAAACG--AAACCTATACCTTCATG------------AACTAA-------------------------------GA-----A-CC------AGAAGGATTTTCTTCGATTTCATA--------AATATTGTTTGTTAATGCTGTT--------------------------------------------GCACT---------------------TAA----CA------------CTTATT--T-------CT---T---TTTT--------GCCATCAGCTAATATGGAGCAGCCCT---TCGAGGAAAACGCTGCACTG------------
droEle1 scf7180000491347:402440-402685 - AGTTTATT-TTTATT-AG-CACTTTTCT----G----TAACCTCTGCGAGAAAATCTGTAACA-------------------ATCCTGCAGCTGGAAA-ATCT----TGAAATAAAGCG--AAACCCATACCTCGATG------------AACTGA-------------------------------AA-----G-CT------ATAAAGTTAAATTTATATTTTGCA--------A---------------------------CT-------------------------------A--TC-----TTACAAACGCTTGGAAGTTACTTACATATG------------TTAAAC--T-------CT-GAT---CTTT--------GTCTTCAGCAAATATGGAGCAACCCT---TCGAGGAAAATGCTGCCTTGCTGAACCACATG
droRho1 scf7180000780108:134183-134436 - AGTTTATT-TTTATT-AG-CACTTTTCT----G----TATCCTCTGCGAGAAAAATTGTAATA------------------CATCCTGCAGCTGGAAA-ATCT----TGAAATAAAGCG--AAACCTATACCTCCATG------------AACGGA-------------------------------AA-----A-CT------ATGAAGATTAATTT-----TTGTA--------A---------------------------CTATTATAAAAATGCCGTTTAATTTATTAATGT-----GCAAT---------------------TAATATTTA------------ATAAGC--T-------CT-GAA---CTTT--------TTCTGCAGCTAATATGGAGCAACCCT---TCGAGGAAAACGCTGCTTTATTGAACCACCTG
droBia1 scf7180000302292:2593210-2593462 + AGACTATT-TTTATT-GG-CTCCATTCT----G----TATCCCCTGCAAGAGAAACTGTAATA------------------CATCCTGCAGCTGGCAA-TTCA----TTAAATAAAACG--AAACCTATACCTCCATG------------AACTGA-------------------------------A------T-CG------ATCAGGGTTATTATACACTTTATT--------A---------------------------AT-------------------------------ACTTG-----TTAAAACGCTGTTTAGTTA-GTTCAAAATT------------ATAATA--TATTTATT--ATAC---GTTT--------TTCTACAGCCAATATGGAGCAGCCCT---TTGAGGAAAATGCTGCTCTGCTCAACCACATG
droTak1 scf7180000416016:146945-147025 - AGTTTATT-ATTATT-GG-CCCCATTCT----G----TATCCTCTGCAGGGAAAACTGTAATA------------------CATCCTGCAGCTGGTAAATTCA----TGAAATA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409672:5556514-5556770 - AGATTATT-TTTATT-GG-CACCATTCT----G----TATCCTCTGCGAGAAAATTTGTAATA------------------CATCCTGCAGATGGCAA-TTCA----TGAAATAAAACA--AAACCTATACCTCCATT------------ACTTGA-------------------------------AA-----T-CA------ATGAGGGGTATTTTTTATATCACT--------A---------------------------CT-------------------------------ATTTT-----TCAAAACGATTCTTAATTTCTTAA----GTATGTTTTAACTTTAAAAA--T-------CT-TAA---CTTT--------GTTCGCAGCCAATATGGAGCAACCCT---TCGAGGAAAACGCTGCTCTGCTTAACCACATG
dm3 chr2R:3539811-3540041 - AGTT-ACA-TTTATT-GG-CACTATTCT----G----TATCCTCTGCA-----AACTGTAACA----------------------CTGCAGCTGGCAA-TTTA----TTAAATAAAGCG--AAATCTATACCTCCACC------------AACTGA-------------------------------AA-----A-CT--------GAGGTGTTTTATATATTTTATA--------A---------------------------AT-------------------------------CTTGT-----TTGCAATGTCTTTTAATTGCGTAA----TC------------ATGATC--T-------CT-TAA---CTTT--------GTCTACAGCCAATATGGAGCAACCCT---ACGAGGAAAATGCCGCTCTGCTTAACCACA--
droSim2 2r:4381085-4381323 - dsi_27409 AGTT-ACA-TTTATT-GG-CACTATTCT----A----TATCCTCTGTA-----AACTGTAACA------------------CAATCTGCAGCTGGCAA-TTTA----TAAAATAAAGCG--AAATCTATACCTCCACC------------AACTGA-------------------------------AA-----G-CT--------GAGGTGTTTTAAATATTTTATA--------A---------------------------AT-------------------------------CTTGT-----TTGCAATGTGTTTTAATTGTGTAATAAATC------------ATGATT--T-------CT-TAA---CTTT--------GTCTACAGCCAATATGGAGCAACCAT---ACGAGGAAAGTGCCGCTCTGCTTAACCACA--
droSec2 scaffold_1:1196784-1197022 - AGTT-ACA-TTTATG-GG-CACTATTCT----G----TATCCTCTGCA-----AACTGTAACA------------------CATTCTGCAGCTGGCAA-TTTA----TGAAATAAAGCG--AAATCTATACCTCCACC------------AACTGA-------------------------------AA-----G-CT--------GAGGTGTTTTAAATATTTTATA--------A---------------------------AT-------------------------------CTTTT-----TAGCAATGTCTTTTAATTGTGTAATAAATC------------TTGACT--T-------CT-TAA---CTTT--------GTCTACAGCCAATATGGAGCAACCCT---ACGAGGAAAGTGCCGCTCTGCTTAACCACA--
droYak3 2L:16211458-16211696 - dya_333 AGTTAA-A-TTTATT-GG-CACTATTTT----G----TATCCTCTGCA-----AACTGTAACA------------------CATTATGCAGCTGGCAT-TTTA----TGAAATAAAGCG--AAAACTATACCTCCACG------------TACTAA-------------------------------GA-----G-CT--------GAGGTTTAATATATATTTTATA--------A---------------------------AA-------------------------------ATTGT-----TGGCATTGTCTTATAATTGTGTAATAAGTC------------ATGATC--T-------CT-TAA---ATTT--------GTCTACAGCCAATATGGAGCAACCCT---ACGAGGAAAGTGCCACTCTGCTTAACCACA--
droEre2 scaffold_4929:19064781-19065019 + AGTT-ACA-TTTATT-AG-CACTATTTT----G----TATCCTCTGCA-----AACTGTAACA------------------CATTCTGCAGCTGGCAA-TTTA----TAAAATAAAGCG--AAATCTATACCTCCACG------------AACTGA-------------------------------AA-----G-CT--------GAGGTTTATTATATATTTTAAA--------A---------------------------CT-------------------------------ATTCT-----AAGCAATGTCTTTTAATTCTGTAATAAATC------------ATGATC--T-------CT-TAA---CTTT--------GTCTGCAGCCAACATGGAGCAACCCT---ACGAGGAAAGTGCAGCTCTACTTAACCACA--

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
AGTTACGT-TTTATACAG-CATTTCTTT----ATTTTGCTGCGCTGTGAGC----CTTCAATT-------C--AAACTGTAACTGCTACAGCTGGGCT-TTAA----GTAAATAAAATA-------------TCCAAAATATATAGTATTCGCCAC----------------------------------------TT------TTGGAG--TATTG-------------------------------------TTTCTTGCTAGC--------------TTTTCATCT--------G------------TCT--TTGTTCATGTGTATAATG----------------CTGCATTTT-------GT-TTT---GTAT--------ATGTGCAGCCAACATGGAGCAGACGT---TGGACGACAGTGCGGCCTTGCTGGATGATATGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....................ATTTCTTT----ATTTTGCTGCGCTGTGAGC----........................................................................................................................................................................................................................................................................................................................................................................................................2713.003001200000000000000000000000000000000000000000000000000000000000
....................ATTTCTTT----ATTTTGCTGCGCTGTG...............................................................................................................................................................................................................................................................................................................................................................................................................2412.002000100000000000000000000000000001000000000000000000000000000000
......GT-TTTATACAG-CATTTCTTT----...............................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000000000000000000000000000000000000000000000000000000000000002
......................................................................................................................................................................................................................................................................................................................................................................................................................AGACGT---TGGACGACAGTGCGG.................2111.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................CT--------G------------TCT--TTGTTCATGTGTAT......................................................................................................................2011.001000000000000000000000000100000000000000000000000000000000000000
............ATACAG-CATTTCTTT----ATTTTGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
................................................................................AACTGCTACAGCTGGGCT-............................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................CT--TTGTTCATGTGTATAATG----------------..................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000100
............................................................................................................................................................................................................................................................................................CATCT--------G------------TCT--TTGTTCATGTGT........................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................TTCGCCAC----------------------------------------TT------TTGGAG--TATTG-------------------------------------TTTC.............................................................................................................................................................................................2511.001000000000000000000000000100000000000000000000000000000000000000
...................CATTTCTTT----ATTTTGCTGCGCTGTGAGC----........................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000000010
...........................................................................................CTGGGCT-TTAA----GTAAATAA............................................................................................................................................................................................................................................................................................................................................1911.001000000000000000010000000000000000000000000000000000000000000000
......................TTCTTT----ATTTTGCTGCGCTGTGAG.............................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000100000000000000000000000
..........................TT----ATTTTGCTGCGCTGTGA..............................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000010000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................AGACGT---TGGACGACAGTGCGGCCTT.............2511.001100000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................AGACGT---TGGACGACAGTGC...................1911.001000000000000010000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGTGCGGCCTTGCTGGATG.....2111.001100000000000000000000000000000000000000000000000000000000000000
................................................................................AACTGCTACAGCTGGGCT-TTAA----....................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000010000000000000000000000000000000000000000
.......................................................................................ACAGCTGGGCT-TTAA----GTA.................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000001000000000000000000000000000000000000
.......................................................CTTCAATT-------C--AAACTGTAACTGCTAC......................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000010000000000000000000000000000000000000
...........................................................................................................................................................C----------------------------------------TT------TTGGAG--TATTG-------------------------------------TTTCTTG..........................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................GCTGGGCT-TTAA----GTAAATAAAATA-------------TCC........................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000010000000000000000000000000000
..........................................GCTGTGAGC----CTTCAATT-------C--AAACTGT...............................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000001000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................ATGGAGCAGACGT---TGGACGA.........................2011.001000000000000000000000000000000000000000000000000000000000000010
..............................................................T-------C--AAACTGTAACTGCTACAGCTGGGCC-............................................................................................................................................................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGACGT---TGGACGACAG......................1911.001010000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................GCAGACGT---TGGACGACAGTGC...................2111.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................TGTAACTGCTACAGCTGGGCT-............................................................................................................................................................................................................................................................................................................................................................2111.001000000000100000000000000000000000000000000000000000000000000000
.................................TTTTGCTGCGCTGTGAGC----C.......................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000001000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................T-------GT-TTT---GTAT--------ATGTGCAGCC...................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................TGTAACTGCTACAGCTGGGCT-T...........................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000001000
............................................................................CTGTAACTGCTACAGCTGGGCT-............................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................T--TTGTTCATGTGTATAATG----------------..................................................................................................1911.001000000010000000000000000000000000000000000000000000000000000000
.........................................................................................AGCTGGGCT-TTAA----GTAAATAAA...........................................................................................................................................................................................................................................................................................................................................2211.001000000000000010000000000000000000000000000000000000000000000000
.....................................GCTGCGCTGTGAGC----CTTCAATT-------.........................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000001000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGTGCGGCCTTGCTGGAT......2011.001000000000000000000000100000000000000000000000000000000000000000
....................................................................................................................................................TTCGCCAC----------------------------------------TT------TTGGAG--TATTG-------------------------------------TTTCT............................................................................................................................................................................................2611.001000000000000000000000000000000001000000000000000000000000000000
.............................................GTGAGC----CTTCAATT-------C--AAAC..................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000010000000000000000000000000000000000000000000000000
..........................TT----ATTTTGCTGCGCTGTGAAA----........................................................................................................................................................................................................................................................................................................................................................................................................2170.141001000000000000000000000000000000000000000000000000000000000000
droMoj3
AGTTTACGTTTTATACATCCTCAATTCTCTTTCGTTTGCTGCGCTGTGAGC----CTTTAAGT-------CTGCAACTGTAACTGCTCCAGCTGGGCA-ATCA----GTAAATAAAAGA-------------TCCAAAATATATAGTATACACCAT-------------------------------TA-----TACC-------GGGGGCTTTGATTGCCTT--------------TCTTTCATT-----------------------------------------------------------------GATG-CGTTTATCTGTGTAATT----------------TTGCATTTC-----------AC---TTTTGTC----TACACGCAGCCAACCTGGATAAACCTT---TGGACGACAGCACGGCTCTGCTGGATGACATGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................................................................................AACTGCTCCAGCTGGGCA-ATCA----GTA.................................................................................................................................................................................................................................................................................................................................................2512.002200000
...................................TTGCTGCGCTGTGAGC----CTT.....................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
........................................................................................................................................................................................................................TTGCCTT--------------TCTTTCATT-----------------------------------------------------------------GATG-C..................................................................................................................................2111.001100000
.......................................................CTTTAAGT-------CTGCAACTGTAACT...........................................................................................................................................................................................................................................................................................................................................................................2211.001100000
...........................................................AAGT-------CTGCAACTGTAACTGCT........................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...TTACGTTTTATACATCCTCAATTCT...................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
..................................TTTGCTGCGCTGTGAGC----CTT.....................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
............................CTTTCGTTTGCTGCGCTGTGAG.............................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000
...TTACGTTTTATACATCCTCAATTCTC..................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
................................................................................AACTGCTCCAGCTGGGCA-ATCA----GTAAAT..............................................................................................................................................................................................................................................................................................................................................2811.001100000
droGri2
AGTTACAT-TTTGTATA--ACACACCTC----A----CCTGTGCTGGAAGCTAAACTCAAAAC--------------TGTTGCTGCTGCAGCTGAGCA-TTAACTAAGAAAATAAAATA-------------TCCACAAAATATAGTACTAGCTGGTATTTACTAATGTATACATATATATTCCATAGA-----C-CA------A----------------------------------------------------------------------------------------------TAT-----GGGGCATTTTGTTCACGTTTGTAATT----------------TTACATTTC-------GT---T---ATTT--------GTATGCAGCCAACATGGAGCAGCCAT---CGGATGAGCATATGGCCTTGATGGATGATTTGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..........TTGTATA--ACACACCTC----A----CCTGTGC...................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110
..........................TC----A----CCTGTGCTGGAAGCTAAA........................................................................................................................................................................................................................................................................................................................................................................................................2111.00110
.........................................................................................................................................AAAATATAGTACTAGCTG....................................................................................................................................................................................................................................................................................................1811.00110
................................A----CCTGTGCTGGAAGCTAAACTCA....................................................................................................................................................................................................................................................................................................................................................................................................2311.00101
...................ACACACCTC----A----CCTGTGCTG.................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110
droWil2
ATTAAGCA-TTTGCATT----ATATTCT----C----TGGTCTTTTTTTGAGCAGCTGGAAAATATTAAG-----------TAAATAACTATTAGTAA-TGA------AAAGTAAAGAA--GAAAATAAACGTTCATA------------AATAAC-------------------------------TC-----A-AT----------------TCTCCAAGTCCTTA--------AAGCTAATTTGTG-----------------------------GGGTTTAATTTAATG-----ATGT-----ATG------------------CAA----CT------------CTAATGGAA-----------ACTTTTGTT--------TACTCCAGCCCACACAGAGCGATCTGCAAACGATGACAATGCGCCACTGCTGAACGAAATGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................................................................................................................................................................................................................................................................................................................................................................................................CCACACAGAGCGATCTGCAAACGAT...........................2511.00100010
.....................................................................................................................................TCATA------------AATAAC-------------------------------TC-----A-AT----------------TCTCC....................................................................................................................................................................................................................................2111.00101000
..................................................................................................................................................................................................................................................................................................ATG-----ATGT-----ATG------------------CAA----CT------------CTAATGGAA-----------AC............................................................................2611.00100010
..........................................................................................................................................................................................................................................................................................................................................A----CT------------CTAATGGAA-----------ACTTTTGTT--------T............................................................2211.00100010
...............................................................................................TAA-TGA------AAAGTAAAGAA--GA....................................................................................................................................................................................................................................................................................................................................1920.50100010
.......A-TTTGCATT----ATATTCT----C----TGGT......................................................................................................................................................................................................................................................................................................................................................................................................................2120.50100010
.................................................................................................A-TGA------AAAGTAAAGAA--GAAAAT................................................................................................................................................................................................................................................................................................................................2120.50100010
...................................................................................AATAACTATTAGTAA-TGA------AAAGT..............................................................................................................................................................................................................................................................................................................................................2320.50100100
dp5
AGACTAGT-TTTATT-GG-CACTATTTT----G----TATCCACTGAAGGAGAAACTGTAATAGATAATA-----------TATCCTTCAACTGGCAA-TTAA----TTAAATAAAACA--AAAA-TTTACCTCCGGA------------TGTTTC---------------------------------GCAAA--CGATTACA----------TAACATAATATTTA--------A---------------------------TT-------------------------------GTTCT-----CCGCCATAGCTAATAAATGTCT--------------C------TATTT--T-------GT-AAA---CTT---------TAACGCAGCCAATATGGAGCGATCGC---CGGACGACAGTGCACCTCTGTTGAACGACTTGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................................GAGAAACTGTAATAGATAATA-----------TATCCTT.......................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGCACCTCTGTTGAACGAC...2111.0010100000000
................................................................................................................................TACCTCCGGA------------TGTTTC---------------------------------GCAAA--CG.........................................................................................................................................................................................................................................................2311.0010100000000
....................................................................TA-----------TATCCTTCAACTGGCAA-TT..........................................................................................................................................................................................................................................................................................................................................................2111.0010000010000
......................TATTTT----G----TATCCACTGAAGGA............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...........................................................................................................................................................C---------------------------------GCAAA--CGATTACA----------TAACATA..................................................................................................................................................................................................................................2111.0010100000000
............................................................................................................................A-TTTACCTCCGGA------------TGTTTC---------------------------------GC................................................................................................................................................................................................................................................................2111.0010100000000
..........................TT----G----TATCCACTGAAGGAGAAACTGTA...................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000001000
...........................................................................................................................AA-TTTACCTCCGGA------------TGTTTC---------------------------------GC................................................................................................................................................................................................................................................................2211.0010100000000
.........TTTATT-GG-CACTATTTT----G----TATCCACT..................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................CGGACGACAGTGCACCTCTGTTGAAC......2611.0010100000000
...............................................................................................................................TTACCTCCGGA------------TGTTTC---------------------------------GCAA..............................................................................................................................................................................................................................................................2111.0010000001000
.......................................................................................................................................................................................................................................................................................................................CATAGCTAATAAATGTCT--------------C------TA...............................................................................................2111.0010100000000
...............................................AGGAGAAACTGTAATAGATA............................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100000
............................................................................................................................................................................................................................................................................................................................................................................................................AATATGGAGCGATCGC---CGGACGACA.......................2511.0010100000000
droPer2
AGACTAGT-TTTATT-GG-CACTATTTT----G----TATCCACTGAAGGAGAAACTGTAATAGATAATA-----------TATCCTTCAACTGGCAA-TTAA----TTAAATAAAACA--AAAA-TTTACCTCCGGA------------TGTTTC---------------------------------GCAAA--CGATTACA----------TAACATAATATTTA--------A---------------------------TT-------------------------------GTTCT-----CCGCCATAGCTAATACATGTCT--------------C------T-------------------A---TTTTGTAAAATTTAACGCAGCCAATATGGAGCGATCGC---CGGACGACAGTGCACCTCTGTTGAACGACTTGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................................................................................................................................................................................................................................................................................................................................................................................................AACGCAGCCAATATGGAGCC........................................2011.001000010
...................................................................................................................................................................................................................................................................................................................................................................................................................AGCGATCGC---CGGACGACAGTG....................2111.001000001
.............................................GAAGGAGAAACTGTAATAG...............................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...................CACTATTTT----G----TATCCACTGAA...............................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCACCTCTGTTGAACGACT..2111.001000001
droAna3
AGTTTAAT-ATTATC-TG-AATTACTTT----G----TAACCACTGCAAAAAAATTTGTAAAA------------------CATTCTGCAGCTGGAAA-ACCA----TGAAATAAAAAA--AA-ACTTTACCTCCATA------------TATTGT-------------------------------TC-----T-CT------------------TT-------TGAAATATTTA-TATTTAATTGTTGACGGTATC-------------------------------------------------TTGCTAAACCTTC--------T--------------------------------------AAAT---CTTA--------TCCTTCAGCTAACCTGGAACATCCGT---TTGAGGACAATGCCCCTCTTCTGAACCACATGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........................................................AAAA------------------CATTCTGCAGCTGGAAA-ACC.........................................................................................................................................................................................................................................................................................................................................................2412.002011000
.......................................................TTGTAAAA------------------CATTCTGCAGCTG.................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...................................................AAATTTGTAAAA------------------CATTCTGCAGCTGGA...............................................................................................................................................................................................................................................................................................................................................................2711.001010000
.................................................................................CATTCTGCAGCTGGAAA-AC..........................................................................................................................................................................................................................................................................................................................................................1911.001000100
...................................................................................TTCTGCAGCTGGAAA-ACC.........................................................................................................................................................................................................................................................................................................................................................1811.001010000
droBip1
AGTTTAAT-ATTATC-TG-CATTTCTTT----G----TAACGACTGCA-TAAAATTTGTAAAA------------------CATTCTGCAGCTGGCAA-ATCA----TGAAATAAAA----AAACCTATACCTCCATA------------TATAT---------------------------------------T-CT------------------TT-------TGTAATATTTT-CATTTATTAAAAGATTGTATC-------------------------------------------------TTGCTAAACCTTC--------T--------------------------------------ATAT---CTTA--------TACTTCAGCTAACATGGAACATCCGT---TTGAGGATAATGCCCCTCTTCTGAACCACATGSizeHit CountTotal NormTotal
No Reads
droKik1
AGTTAATA-TTTACC-GG-CACTGATTT----G----TATCCTCTGAGAGAGAAACTGTAAAA------------------GATCCTGCAGCTGGCAT-TTCA----TTGAATAAAACTATAGAACTATACCTCCATA------------AACTGT-------------------------------CA-----A-CT------TACAGGCTT----G-------TGCTTTAATTT-TAAT---------------------------------------------------------------------------------------TAATTAATC------------TTGA----------------AA---CTTT--------ATTCCTAGCCAATATGGAGCAGCCGT---TCGAGGAAACTGTGGGCCTA------------SizeHit CountTotal NormTotal
No Reads
droFic1
AGTTTATT-TTTATT-GG-CACCATTCT----G----TATCCTCTGCGAGGTAAACTGTAATA------------------CATCCTGCAGTTGGCAA-TTCT----TGAAATAAAACG--AAACCTATACCTTCATG------------AACTAA-------------------------------GA-----A-CC------AGAAGGATTTTCTTCGATTTCATA--------AATATTGTTTGTTAATGCTGTT--------------------------------------------GCACT---------------------TAA----CA------------CTTATT--T-------CT---T---TTTT--------GCCATCAGCTAATATGGAGCAGCCCT---TCGAGGAAAACGCTGCACTG------------SizeHit CountTotal NormTotal
No Reads
droEle1
AGTTTATT-TTTATT-AG-CACTTTTCT----G----TAACCTCTGCGAGAAAATCTGTAACA-------------------ATCCTGCAGCTGGAAA-ATCT----TGAAATAAAGCG--AAACCCATACCTCGATG------------AACTGA-------------------------------AA-----G-CT------ATAAAGTTAAATTTATATTTTGCA--------A---------------------------CT-------------------------------A--TC-----TTACAAACGCTTGGAAGTTACTTACATATG------------TTAAAC--T-------CT-GAT---CTTT--------GTCTTCAGCAAATATGGAGCAACCCT---TCGAGGAAAATGCTGCCTTGCTGAACCACATGSizeHit CountTotal NormTotal
No Reads
droRho1
AGTTTATT-TTTATT-AG-CACTTTTCT----G----TATCCTCTGCGAGAAAAATTGTAATA------------------CATCCTGCAGCTGGAAA-ATCT----TGAAATAAAGCG--AAACCTATACCTCCATG------------AACGGA-------------------------------AA-----A-CT------ATGAAGATTAATTT-----TTGTA--------A---------------------------CTATTATAAAAATGCCGTTTAATTTATTAATGT-----GCAAT---------------------TAATATTTA------------ATAAGC--T-------CT-GAA---CTTT--------TTCTGCAGCTAATATGGAGCAACCCT---TCGAGGAAAACGCTGCTTTATTGAACCACCTGSizeHit CountTotal NormTotal
No Reads
droBia1
AGACTATT-TTTATT-GG-CTCCATTCT----G----TATCCCCTGCAAGAGAAACTGTAATA------------------CATCCTGCAGCTGGCAA-TTCA----TTAAATAAAACG--AAACCTATACCTCCATG------------AACTGA-------------------------------A------T-CG------ATCAGGGTTATTATACACTTTATT--------A---------------------------AT-------------------------------ACTTG-----TTAAAACGCTGTTTAGTTA-GTTCAAAATT------------ATAATA--TATTTATT--ATAC---GTTT--------TTCTACAGCCAATATGGAGCAGCCCT---TTGAGGAAAATGCTGCTCTGCTCAACCACATGSizeHit CountTotal NormTotal
No Reads
droTak1
AGTTTATT-ATTATT-GG-CCCCATTCT----G----TATCCTCTGCAGGGAAAACTGTAATA------------------CATCCTGCAGCTGGTAAATTCA----TGAAATA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
AGATTATT-TTTATT-GG-CACCATTCT----G----TATCCTCTGCGAGAAAATTTGTAATA------------------CATCCTGCAGATGGCAA-TTCA----TGAAATAAAACA--AAACCTATACCTCCATT------------ACTTGA-------------------------------AA-----T-CA------ATGAGGGGTATTTTTTATATCACT--------A---------------------------CT-------------------------------ATTTT-----TCAAAACGATTCTTAATTTCTTAA----GTATGTTTTAACTTTAAAAA--T-------CT-TAA---CTTT--------GTTCGCAGCCAATATGGAGCAACCCT---TCGAGGAAAACGCTGCTCTGCTTAACCACATGSizeHit CountTotal NormTotal
No Reads
dm3
AGTT-ACA-TTTATT-GG-CACTATTCT----G----TATCCTCTGCA-----AACTGTAACA----------------------CTGCAGCTGGCAA-TTTA----TTAAATAAAGCG--AAATCTATACCTCCACC------------AACTGA-------------------------------AA-----A-CT--------GAGGTGTTTTATATATTTTATA--------A---------------------------AT-------------------------------CTTGT-----TTGCAATGTCTTTTAATTGCGTAA----TC------------ATGATC--T-------CT-TAA---CTTT--------GTCTACAGCCAATATGGAGCAACCCT---ACGAGGAAAATGCCGCTCTGCTTAACCACA--SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............T-GG-CACTATTCT----G----TATCCTCTGCA-----AA........................................................................................................................................................................................................................................................................................................................................................................................................26113.001300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................CCCT---ACGAGGAAAATGCCGCT...............2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................AAATCTATACCTCCACC------------AACTGA-------------------------------AA-----.............................................................................................................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................AACA----------------------CTGCAGCTGGCAA-TTTA----TT..................................................................................................................................................................................................................................................................................................................................................2315.0050000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TCT----G----TATCCTCTGCA-----AACTGTAACA----------------------CT........................................................................................................................................................................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000002000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................ACCCT---ACGAGGAAAATGCCGCTCT.............2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TT-GG-CACTATTCT----G----TATCCTCTGCA-----..........................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................TTA----TTAAATAAAGCG--AAATCTATACC...........................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..............................................................A----------------------CTGCAGCTGGCAA-TTTA----TT..................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................TATCCTCTGCA-----AACTGTAACA----------------------CTGC......................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................AACTGTAACA----------------------CTGCAGCTGGCAA-TT..........................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................CG--AAATCTATACCTCCACC------------AA.......................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................ATCTATACCTCCACC------------AACTGA-------------------------------AA-----A-A..........................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGCAACCCT---ACGAGGAAAATGC...................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000001000000000000000000000
...........................................................................................................TTAAATAAAGCG--AAATCTATACC...........................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................GTAACA----------------------CTGCAGCTGGCA..............................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................AAATCTATACCTCCACC------------AACTGA-------------------------------....................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................GCAA-TTTA----TTAAATAAAGCG--AAATCT................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................CAA-TTTA----TTAAATAAAGCG--AAATCT................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................A-----AACTGTAACA----------------------CTGCAGCTGGC...............................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................ATGGAGCAACCCT---ACGAGGA.........................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000010000000000000000000000000000
.......................................TCCTCTGCA-----AACTGTAACA----------------------CTG.......................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................ATATGGAGCAACCCT---ACGAGG..........................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000010
....................................................................................................TTA----TTAAATAAAGCG--AAATCTATA.............................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TCT----G----TATCCTCTGCA-----AACTGTAACA----------------------C.........................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................TCTGCA-----AACTGTAACA----------------------CTGCAGCTGG................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................ATAAAGCG--AAATCTATACCTCCACC------------.........................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............T-GG-CACTATTCT----G----TATCCTCTGCA-----..........................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CTATTCT----G----TATCCTCTGCA-----A.........................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TATTCT----G----TATCCTCTGCA-----AACTGT....................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................TGCA-----AACTGTAACA----------------------CTGCAGCTGG................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................TCCACC------------AACTGA-------------------------------AA-----A-CT--------GAGGTGTTTTA......................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................TA----TTAAATAAAGCG--AAATCTATACC...........................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.....................................................AACTGTAACA----------------------CTGCAGCTGGCAA-TTTA----....................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......A-TTTATT-GG-CACTATTCT----G----TATCCTCTG.................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGCAACCCT---ACGAGGAAA.......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
........................................................TGTAACA----------------------CTGCAGCTGGC...............................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
....................................................................................................TTA----TTAAATAAAGCG--AAATCTATACCTC.........................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...........................T----G----TATCCTCTGCA-----AACTGTAACA----------------------CTGC......................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................AAATCTATACCTCCACC------------AACTG....................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................CCACC------------AACTGA-------------------------------AA-----A-CT--------GA...............................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................ACC------------AACTGA-------------------------------AA-----A-CT--------GAGGTGT..........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....ACA-TTTATT-GG-CACTATTCT----G----TATCC.....................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TT-GG-CACTATTCT----G----TATCCTC...................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................TCTGCA-----AACTGTAACA----------------------CTGCAGCTGGCAA-............................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................GCA-----AACTGTAACA----------------------CTGCAGCTGGCAA-TT..........................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................TTA----TTAAATAAAGCG--AAATC.................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................ACCCT---ACGAGGAAAATGCCGCTCTG............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................AATATGGAGCAACCCT---ACGAGGAAG.......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TT-GG-CACTATTCT----G----TATCCTCTG.................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................AAAGCG--AAATCTATACCTC.........................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................AATAAAGCG--AAATCTATACCTCCA.......................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
...............................................................................................CAA-TTTA----TTAAATAAAGCG--AAAT..................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................CTGCAGCTGGCAA-TTTA----TTAAAT..............................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACCCT---ACGAGGAAAATG....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................TATCCTCTGCA-----AACTGTAACA----------------------C.........................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................CAATATGGAGCAACCCT---ACGAGGAA........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................AAGCG--AAATCTATACCTCCACC------------AAC......................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................AATATGGAGCAACCCT---ACGAGGAAA.......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................GTAACA----------------------CTGCAGCTGGCAA-TTT.........................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................TAACA----------------------CTGCAGCTGGCAC-C...........................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................TGCAGCTGGCAA-TTTA----TTAAATAA............................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................CAATATGGAGCAACCCT---ACGAGGA.........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.....................................................................................................................CG--AAATCTATACCTCCACC------------A........................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................CCT---ACGAGGAAAATGCCGCTC..............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................ATTCT----G----TATCCTCTGCA-----AACTG.....................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................CA----------------------CTGCAGCTGGCAA-TTTA----TTAAATA.............................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......A-TTTATT-GG-CACTATTCT----G----TATCCTCTGC................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................CCT---ACGAGGAAAATGCCGCTCTG............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................TATCCTCTGCA-----AACTGTAACA----------------------..........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................AATAAAGCG--AAATCTATACCTCCACC------------A........................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATGCCGCTCTGCTTAAC......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................CTCTGCA-----AACTGTAACA----------------------CTGC......................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................AA----TC------------ATGATC--T-------CT-TAA---CTTT--------GT...........................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
..........................CT----G----TATCCTCTGCA-----AACTGTAACA----------------------CT........................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................A----------------------CTGCAGCTGGCAA-TTTA----TTAAATAAAGC.........................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................ATCTATACCTCCACC------------AACTGA-------------------------------AA-----A-...........................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TTCT----G----TATCCTCTGCA-----AA........................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...........................................................................................................TTAAATAAAGCG--AAATCTATACCT..........................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
....................................................................................................................GCG--AAATCTATACCTCCACC------------AACTG....................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CACTATTCT----G----TATCCTCT..................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................A-----AACTGTAACA----------------------CTGCAGCTG.................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................CA-----AACTGTAACA----------------------CTGCAGCTGGCAA-TT..........................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CACTATTCT----G----TATCCTCTG.................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TATT-GG-CACTATTCT----G----TATCCT....................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................ATGGAGCAACCCT---ACGAGGAAA.......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
........................TTCT----G----TATCCTCTGCA-----AACT......................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................ATTCT----G----TATCCTCTGCA-----AACT......................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................ACC------------AACTGA-------------------------------AA-----A-CT--------GAGGTGTTTTA......................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................AACTGA-------------------------------AA-----A-CT--------GAGGTGTTT........................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.........................TCT----G----TATCCTCTGCA-----AACTGTAA..................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................TA----TTAAATAAAGCG--AAATCTATACCT..........................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.....................................................AACTGTAACA----------------------CTGCAGCT..................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
..............T-GG-CACTATTCT----G----TATCCTCTGCA-----AAC.......................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................A-----AACTGTAACA----------------------CTGCAGCTGGCA..............................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
AGTT-ACA-TTTATT-GG-CACTATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................TCTGCA-----AACTGTAACA----------------------CTGCAGCTGGCAA-T...........................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................AACTGTAACA----------------------CTGCAGCTGGC...............................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................CA----------------------CTGCAGCTGGCAA-TTTA----TTAAATAAAGC.........................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................AGCG--AAATCTATACCTCCACC------------AACTGA-------------------------------....................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................ACGAGGAAAATGCCGCTCTGC...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...........................................CTGCA-----AACTGTAACA----------------------CTGCAGCTGGCAA-............................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................TAAATAAAGCG--AAATCTATACCTCCA.......................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................G----TATCCTCTGCA-----AACTGTAACA----------------------CTGC......................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................GCTGGCAA-TTTA----TTAAATAAAGCG--AA....................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................ACCCT---ACGAGGAAAATGCCG.................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
...........TATT-GG-CACTATTCT----G----TATCCTC...................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................AAATAAAGCG--AAATCTATACCTCCACC------------AA.......................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................TTAAATAAAGCG--AAATCTATACCTC.........................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................CC------------AACTGA-------------------------------AA-----A-CT--------GAGGTGT..........................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................AAATAAAGCG--AAATCTATACCTCCACC------------.........................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................ATCCTCTGCA-----AACTGTAA..................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAACCCT---ACGAGGAAAATGC...................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
..............................................................A----------------------CTGCAGCTGGCAA-TTTA----TTAAAT..............................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................ACTGA-------------------------------AA-----A-CT--------GAGGTGTT.........................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.....................................................................................................................CG--AAATCTATACCTCCACC------------AACTGA-------------------------------....................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................TTAAATAAAGCG--AAATCTATACCTCCACC------------A........................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................CT---ACGAGGAAAATGCCGCTC..............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..................................................................................................................AAGCG--AAATCTATACCTCCACC------------AACTGA-------------------------------....................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................CTGCA-----AACTGTAACA----------------------CTG.......................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
............................................................ACA----------------------CTGCAGCTGGCAA-TTTA----T...................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................AACTGTAACA----------------------CTGCAGCTG.................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................CG--AAATCTATACCTCCACC------------AACTGA-------------------------------T...................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GG-CACTATTCT----G----TATCCTCTGCA-----..........................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................CC------------AACTGA-------------------------------AA-----A-CT--------GAGGTGTT.........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................AACA----------------------CTGCAGCTGGCAA-TTTA----TTAAA...............................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................TGTAACA----------------------CTGCAGCTGGT...............................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AGTT-ACA-TTTATT-GG-CACTATTCT----A----TATCCTCTGTA-----AACTGTAACA------------------CAATCTGCAGCTGGCAA-TTTA----TAAAATAAAGCG--AAATCTATACCTCCACC------------AACTGA-------------------------------AA-----G-CT--------GAGGTGTTTTAAATATTTTATA--------A---------------------------AT-------------------------------CTTGT-----TTGCAATGTGTTTTAATTGTGTAATAAATC------------ATGATT--T-------CT-TAA---CTTT--------GTCTACAGCCAATATGGAGCAACCAT---ACGAGGAAAGTGCCGCTCTGCTTAACCACA--SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................CG--AAATCTATACCTCCACC------------AACT.....................................................................................................................................................................................................................................................................................................2312.00200000200000000000
....................ACTATTCT----A----TATCCTCTGTA-----AACT......................................................................................................................................................................................................................................................................................................................................................................................................2412.00200200000000000000
.........................................................GTAACA------------------CAATCTGCAGCT..................................................................................................................................................................................................................................................................................................................................................................1812.00200200000000000000
...........................................................AACA------------------CAATCTGCAGCTGGC...............................................................................................................................................................................................................................................................................................................................................................1912.00201010000000000000
.........................................................GTAACA------------------CAATCTGCAGCTG.................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000000000
..........................................................TAACA------------------CAATCTGCAGCTG.................................................................................................................................................................................................................................................................................................................................................................1811.00100010000000000000
.............................................GTA-----AACTGTAACA------------------CAATCTGCAGCTGGC...............................................................................................................................................................................................................................................................................................................................................................2811.00101000000000000000
.....................CTATTCT----A----TATCCTCTGTA-----..........................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010000000000000
...........................................CTGTA-----AACTGTAACA------------------CAATCT........................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
..................................................................................AATCTGCAGCTGGCAA-TTT.........................................................................................................................................................................................................................................................................................................................................................1911.00100000000000100000
............................................TGTA-----AACTGTAACA------------------CAATCTGCA.....................................................................................................................................................................................................................................................................................................................................................................2311.00100000000100000000
.................G-CACTATTCT----A----TATCCTCTGTA-----AACTG.....................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000000000
.GTT-ACA-TTTATT-GG-CACT........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
...........TATT-GG-CACTATTCT----A----TATCCTCTGTA-----A.........................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................T---ACGAGGAAAGTGCCGCTCTGCTTA........2511.00100000001000000000
.........................TCT----A----TATCCTCTGTA-----AACT......................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000000000
droSec2
AGTT-ACA-TTTATG-GG-CACTATTCT----G----TATCCTCTGCA-----AACTGTAACA------------------CATTCTGCAGCTGGCAA-TTTA----TGAAATAAAGCG--AAATCTATACCTCCACC------------AACTGA-------------------------------AA-----G-CT--------GAGGTGTTTTAAATATTTTATA--------A---------------------------AT-------------------------------CTTTT-----TAGCAATGTCTTTTAATTGTGTAATAAATC------------TTGACT--T-------CT-TAA---CTTT--------GTCTACAGCCAATATGGAGCAACCCT---ACGAGGAAAGTGCCGCTCTGCTTAACCACA--SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................CTGTAACA------------------CATTCTGCAGCTGGCAA-TT..........................................................................................................................................................................................................................................................................................................................................................2711.0010010
...........................................................AACA------------------CATTCTGCAGCTGGC...............................................................................................................................................................................................................................................................................................................................................................1911.0010010
.....................CTATTCT----G----TATCCTCTGCA-----AACTGT....................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100
.......A-TTTATG-GG-CACTATTCT----G----..........................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
.......................................TCCTCTGCA-----AACTGTAACA------------------CATTCTGCA.....................................................................................................................................................................................................................................................................................................................................................................2811.0011000
....................ACTATTCT----G----TATCCTCTGCA-----AAC.......................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000
.............................................................................................................AAATAAAGCG--AAATCTATACCTCCACC------------.........................................................................................................................................................................................................................................................................................................2711.0010010
............ATG-GG-CACTATTCT----G----TATCCTCTGC................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000
......................................................ACTGTAACA------------------CATTCTGCAGCTG.................................................................................................................................................................................................................................................................................................................................................................2211.0011000
.......A-TTTATG-GG-CACTATTCT----G----T.........................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
.......................................................................................................................................................................................................................................................................................................................................................................................................................ACCCT---ACGAGGAAAGTGCCGC................2111.0010001
...............................................A-----AACTGTAACA------------------CATTCTGCAGCTGG................................................................................................................................................................................................................................................................................................................................................................2511.0011000
.....................................TATCCTCTGCA-----AACTGTAACA------------------CATTCTGC......................................................................................................................................................................................................................................................................................................................................................................2911.0011000
droYak3
AGTTAA-A-TTTATT-GG-CACTATTTT----G----TATCCTCTGCA-----AACTGTAACA------------------CATTATGCAGCTGGCAT-TTTA----TGAAATAAAGCG--AAAACTATACCTCCACG------------TACTAA-------------------------------GA-----G-CT--------GAGGTTTAATATATATTTTATA--------A---------------------------AA-------------------------------ATTGT-----TGGCATTGTCTTATAATTGTGTAATAAGTC------------ATGATC--T-------CT-TAA---ATTT--------GTCTACAGCCAATATGGAGCAACCCT---ACGAGGAAAGTGCCACTCTGCTTAACCACA--SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................TTT----G----TATCCTCTGCA-----AACT......................................................................................................................................................................................................................................................................................................................................................................................................1915.00531100000000
..............................................................................................................................TATACCTCCACG------------TACTAA-------------------------------G...................................................................................................................................................................................................................................................................1911.00101000000000
................................................................................................................................TACCTCCACG------------TACTAA-------------------------------GA-----G-CT--------G................................................................................................................................................................................................................................................2211.00110000000000
........................................................TGTAACA------------------CATTATGCAGCTG.................................................................................................................................................................................................................................................................................................................................................................2011.00110000000000
.......................ATTTT----G----TATCCTCTGCA-----AACT......................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000
.........................................................GTAACA------------------CATTATGCAGCTGGCAT-TT..........................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
............................................................................................................................ACTATACCTCCACG------------TACTAA-------------------------------GA-----G-C..........................................................................................................................................................................................................................................................2411.00100000010000
....................ACTATTTT----G----TATCCTCTGCA-----AAC.......................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000000000
.......................................................................................................................................ACG------------TACTAA-------------------------------GA-----G-CT--------GAGGT............................................................................................................................................................................................................................................1911.00100000010000
....................ACTATTTT----G----TATCCTCTGCA-----AACT......................................................................................................................................................................................................................................................................................................................................................................................................2411.00110000000000
..............................................................................................................................TATACCTCCACG------------TACTAA-------------------------------GA-----G-CT--------GA...............................................................................................................................................................................................................................................2511.00101000000000
.........................................................GTAACA------------------CATTATGCAGCTGGC...............................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
...............................................................................................................................ATACCTCCACG------------TACTAA-------------------------------GA-----G-CT--------GAGGT............................................................................................................................................................................................................................................2711.00100000010000
......................................................................................................................................CACG------------TACTAA-------------------------------GA-----G-CT--------GAGGT............................................................................................................................................................................................................................................2011.00100000010000
...................CACTATTTT----G----TATCCTCTGCA-----..........................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
droEre2
AGTT-ACA-TTTATT-AG-CACTATTTT----G----TATCCTCTGCA-----AACTGTAACA------------------CATTCTGCAGCTGGCAA-TTTA----TAAAATAAAGCG--AAATCTATACCTCCACG------------AACTGA-------------------------------AA-----G-CT--------GAGGTTTATTATATATTTTAAA--------A---------------------------CT-------------------------------ATTCT-----AAGCAATGTCTTTTAATTCTGTAATAAATC------------ATGATC--T-------CT-TAA---CTTT--------GTCTGCAGCCAACATGGAGCAACCCT---ACGAGGAAAGTGCAGCTCTACTTAACCACA--SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................................GTAACA------------------CATTCTGCAGCTGGC...............................................................................................................................................................................................................................................................................................................................................................2112.0021000010
.............................................GCA-----AACTGTAACA------------------CATTCTGC......................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
......................................................................................................................................................................................................................................................................................................................................................................................................................AACCCT---ACGAGGAAAGTGCAGCTC..............2411.0010010000
......................................................ACTGTAACA------------------CATTCTGCAGCTGGC...............................................................................................................................................................................................................................................................................................................................................................2411.0011000000
...T-ACA-TTTATT-AG-CACTATTT....................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001000
...............................................................................................................ATAAAGCG--AAATCTATACCTCCACG------------AAAA.....................................................................................................................................................................................................................................................................................................2911.0010000100
...............................................................................................................ATAAAGCG--AAATCTATACCTCCACG------------AT.......................................................................................................................................................................................................................................................................................................2711.0010000100
..............................................................................................................................................................................................................................................................................................................................................................................................................CATGGAGCAACCCT---ACGAGGAAAGT.....................2511.0010000100
.........................TTT----G----TATCCTCTGCA-----AACTGTAACA------------------CA............................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
.........................................................GTAACA------------------CATTCTGCAGCTGG................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
...............................................................................................................ATAAAGCG--AAATCTATACCTCCAC......................................................................................................................................................................................................................................................................................................................2411.0010100000
....................................................................................................................................................................................................................................................................................................................................................................................................................GCAACCCT---ACGAGGAAAGT.....................1911.0010001000
.........................................................GTAACA------------------CATTCTGCAGCTGGCA..............................................................................................................................................................................................................................................................................................................................................................2211.0010001000
...............................................A-----AACTGTAACA------------------CATTCTGCAGCTGGC...............................................................................................................................................................................................................................................................................................................................................................2611.0010100000

Generated: 05/17/2015 at 04:22 AM