ID:

dvi_69

 Coordinate:

scaffold_12928:1264110-1264171 -

 Confidence:

Known Ortholog

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

TTCATGTGGTGTCGCTTTCAAGAGCAGCTCGCGCTTCTGCCCTACGCACGAGTTCCACTAATCAAGTTTTGAGCGGATTCGAAAGTCGAAAACTTGACACGTTGAGCTCGTCCGTGGGGCGGCATTCAAGCCAGAAGAGCACAAAATAACGATCAAGTGTAA
***********************************.((((((((((.((((((((.((...(((((((((..((..........))..)))))))))...)).)))))))).))))))))))....************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR060664
9_males_carcasses_total
 V053
head
 M028
head
 SRR060667
160_females_carcasses_total
 SRR060671
9x160_males_carcasses_total
 SRR060672
9x160_females_carcasses_total
 SRR060668
160x9_males_carcasses_total
 SRR060665
9_females_carcasses_total
 M047
female body
 SRR060669
160x9_females_carcasses_total
 SRR060666
160_males_carcasses_total
 SRR060678
9x140_testes_total
 V116
male body		 M027
male body		 SRR060655
9x160_testes_total
 SRR060670
9_testes_total
 M061
embryo
 SRR060680
 9xArg_testes_total
 SRR060679
140x9_testes_total
 SRR060689
160x9_testes_total
 SRR060681
Argx9_testes_total
 SRR1106730
embryo_16-30h
 SRR060659
Argentina_testes_total
 SRR1106729
mixed whole adult body
 SRR060656
9x160_ovaries_total
 V047
embryo
 SRR060683
160_testes_total
 SRR060654
160x9_ovaries_total
 SRR060676
9xArg_ovaries_total
 SRR060677
Argx9_ovaries_total
..........................................................................................AACTTGACACGTTGAGCTCGT................................................... 21 0 1 252.00 252 43 31 78 10 14 6 10 6 7 4 1 8 7 6 0 1 1 1 1 3 3 2 2 2 2 0 0 1 1 1
..................................................AGTTCCACTAATCAAGTTTTG........................................................................................... 21 0 1 217.00 217 21 59 2 17 19 16 19 10 32 10 8 0 2 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0
..................................................AGTTCCACTAATCAAGTTTTGA.......................................................................................... 22 0 1 210.00 210 50 42 0 24 9 17 18 27 0 11 10 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................AAAACTTGACACGTTGAGCTCG.................................................... 22 0 1 110.00 110 23 8 19 12 8 7 6 10 5 7 0 0 2 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................AAACTTGACACGTTGAGCTCG.................................................... 21 0 1 97.00 97 25 3 19 6 12 6 10 6 0 2 2 0 0 0 4 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................AAACTTGACACGTTGAGCTCGT................................................... 22 0 1 38.00 38 16 2 4 1 5 4 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................AACTTGACACGTTGAGCTCGTT.................................................. 22 1 1 37.00 37 8 4 4 3 2 1 0 0 2 0 0 2 3 0 0 2 1 2 1 0 0 0 0 0 1 1 0 0 0 0
..........................................................................................AACTTGACACGTTGAGCTCG.................................................... 20 0 1 30.00 30 3 4 2 1 1 0 0 1 0 0 0 3 0 2 3 1 0 1 2 0 2 2 1 0 0 0 1 0 0 0
..................................................AGTTCCACTAATCAAGTTTT............................................................................................ 20 0 1 16.00 16 2 6 0 1 0 0 1 1 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................GAGTTCCACTAATCAAGTTTT............................................................................................ 21 0 1 14.00 14 2 3 0 2 2 0 0 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................AAAACTTGACACGTTGAGCTC..................................................... 21 0 1 13.00 13 0 2 2 0 3 0 0 4 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AACTTGACACGTTGAGCTCGG................................................... 21 1 1 10.00 10 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AGTTCCACTAATCAAGTTTTGAG......................................................................................... 23 0 1 9.00 9 4 0 0 2 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................GAAAACTTGACACGTTGAGCTCG.................................................... 23 0 1 7.00 7 1 1 0 0 1 0 3 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AACTTGACACGTTGAGCTCGC................................................... 21 1 1 7.00 7 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AACTTGACACGTTGAGCTCGTTT................................................. 23 2 1 6.00 6 1 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................AGTTCCACTAATCAAGTTT............................................................................................. 19 0 1 5.00 5 0 2 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AACTTGACACGTTGAGCTCGTA.................................................. 22 1 1 5.00 5 1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AACTTGACACGTTGAGCTCGTC.................................................. 22 0 1 4.00 4 0 0 0 0 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................AAACTTGACACGTTGAGCTC..................................................... 20 0 1 4.00 4 2 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AGTTCCACTAATCACGTTTTG........................................................................................... 21 1 1 4.00 4 0 1 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................AAAACTTGACACGTTGAGCTCGT................................................... 23 0 1 4.00 4 1 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................GTTCCACTAATCAAGTTTTG........................................................................................... 20 0 1 4.00 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................GAGTTCCACTAATCAAGTTT............................................................................................. 20 0 1 4.00 4 0 1 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AACTTGACACGTTGAGCTCGTCC................................................. 23 0 1 3.00 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0
..................................................AGTTCCACTAATCAAGTTTTT........................................................................................... 21 1 1 3.00 3 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AGCTTGACACGTTGAGCTCGT................................................... 21 1 1 3.00 3 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AGTTCCACTAATCAAGTTTTGT.......................................................................................... 22 1 1 3.00 3 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CGTTCCACTAATCAAGTTTTG........................................................................................... 21 1 1 3.00 3 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................ACTTGACACGTTGAGCTCGT................................................... 20 0 1 2.00 2 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................AAAGTCGAAAACTTGACACGTTGAGCT...................................................... 27 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................AAACTTGACACGTTGAGCTCGTT.................................................. 23 1 1 2.00 2 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................AAAACTTGACACGTTGAGCTCT.................................................... 22 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................GAAAACTTGACACGTTGAGCT...................................................... 21 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................GAGCGTATTCGAAAGTCGAA........................................................................ 20 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................CAGTTCCACTAATCAAGTTTTGA.......................................................................................... 23 1 1 2.00 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AGTTCCACTAATCACGTTTTGA.......................................................................................... 22 1 1 2.00 2 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AGTACCACTAATCAAGTTTTGA.......................................................................................... 22 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CGTTCCACTAATCAAGTTTTGA.......................................................................................... 22 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AGTTCCACAAATCAAGATTTGA.......................................................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................CACTTGACACGTTGAGCACGT................................................... 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................AACTTGACCCGTTGAGCTCGT................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................AAACTCGACACGTTGAGCTCG.................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................AAACATGACACGTTGAGCTCG.................................................... 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................AAAACTTGACACGTTGAGCTCA.................................................... 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................GAGCGGATTCGAAAGTCG.......................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AACTTGACACGTTGAGCTT..................................................... 19 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................GTTCCACTAATCAAGTTTTGA.......................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................ACTTGACACGTTGAGCTCG.................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GGTTCCACTAATCAAGTTTTGA.......................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AACTTGACACGTTCAGCTCGT................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AACTTGACACGTTGCGATCGT................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................CAACTTGACACGTTGAGCTCGT................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................AAACTTGACACGTTGACCTCGC................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AGTTGCACTAATCAAGTTTTGA.......................................................................................... 22 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AACTTGACACGTTGAGCT...................................................... 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AACTTGACACGTTGAGCTCGTCT................................................. 23 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................AGCTCCACTAATCAAGTTTT............................................................................................ 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AGCTCCACTAATCAAGTTTTG........................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................AGACTTGACACGTTGAGCTCG.................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AGTTCCACTAATCAAGTTCTGAG......................................................................................... 23 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AGTTCCACTAATTAAGTTTTGAG......................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AACTTGACACGTTGTCCTCGT................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................GATTCGAAAGTCGAAAACTTGA................................................................. 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AGTGCCACTAAGCAAGTGTTGA.......................................................................................... 22 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AGTTCCACTAAGCAAGATTTG........................................................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AGTTACACTAATCAAGTTTTGA.......................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AACTTGACACGTTGAGCGCGT................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AACTTGACACGTCGAGCTCGT................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AACTTGACACGTTGAGCTCTT................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AACTTGACACGTTTAGCTCGT................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
........................................................................................AAAAATTGACACGTTGAGCTCG.................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................ATTTCCACTAATCAAGTTTTG........................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AACTTGACACGTTGAGCTCGCT.................................................. 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AACTTGACACGTTGAGCC...................................................... 18 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................AAACTTGACACGTTTAGCT...................................................... 19 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................CACTTGACACGTTGAGCTCGT................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AGTTACACTAATCAAGTTTTG........................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AGTTCCACTAAGCAAGATTTGA.......................................................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................AAACTTGACACGTTGAGCT...................................................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AGATCCACTAATCAAGTTTTGA.......................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AGTTCCACTAATCAAGTGTTGA.......................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................CGAAAACTTGACACGTTGAGC....................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AGGTCCACTAATCAAGTTTTG........................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................AAAGTCGAAAACTTGACACGTTGAGC....................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AGTGCCACTAATCAAGTTTTGA.......................................................................................... 22 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AGCTTGACACGTTGACCTCGT................................................... 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AACTTGACACGATGAGCTCGT................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................ACTTGACACGTCGAGCTCGTT.................................................. 21 2 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................CTTGACACGTTGAGCTCGTTT................................................. 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AGTTCCACTAATCACGTTTT............................................................................................ 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................AAACTTGACACTTTGAGCTCG.................................................... 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AGTTCCACTGATCATGTTTTG........................................................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AGTTCCACTAATCAGGTTTTG........................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AACTTGACACGTTGAGCTC..................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AGTTCGACTAATCAAGTTTT............................................................................................ 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................AAACTTGACACGTTGAGCTCGA................................................... 22 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................GAGTTGCACTAATCAAGTTT............................................................................................. 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................ACCTTGACACGTTGAGCTCGTT.................................................. 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................AAACTTGACACGTTGAGCTCGTTTT................................................ 25 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................ACTTGACACGTTGAGCTCGTC.................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AGTTCCACTACTCAAGTTTTG........................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AGTTCCACTAAGCAAGTTTTGA.......................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AGGTCCACTAATCATGTTTTG........................................................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AGATCCACTAATCAAGTTTTG........................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AGTTCCACTAATCAAGTCTTG........................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................AAAACTTGACACGTTGAGCTCGG................................................... 23 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AACTTGGCACGTTGAGCTCGT................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AGTTCCACTAATCCAGTTTTG........................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AACTTGACACGTTAGGCTCGT................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AACTTGACACGTTGAGTTCGT................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................GAGTTCCACTAATCAAGTT.............................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TGTTCCACTAATCAAGTTTTGA.......................................................................................... 22 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AGTTCCACTAATCAAGTTTTAA.......................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................AAACTTGACACGTTGCGCCCGT................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AGTTCCACTACTCAAGTTTTGA.......................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................GAGTTCCACTAATCAAATTTT............................................................................................ 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................GAGTTCCACTAATCAAGTTTTG........................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AGTTCCACTAATCCCGTTTTG........................................................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................ATACTTGACACGTTGAGCTCG.................................................... 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AGTACCACTAATCAAGTTTTG........................................................................................... 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AGTTCCACTAATCACGTTTTGT.......................................................................................... 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AGTTCCACTAATAAAGTTTCG........................................................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................AAACTTGACACGTTGAGCTCT.................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................CGAGTTCCACTAATCAAGTTT............................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................GGAAACTTGACACGTTGAGCTC..................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AACTTGACACGTTGAGCTCGTCA................................................. 23 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AGTTCCGCTAATCAAGTTTTG........................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................GAGTTGCCCTAATCAAGTTT............................................................................................. 20 2 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AACTTGACAGGTTGTGCTCCT................................................... 21 3 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AGGTCCACTGATCAAGTTTCG........................................................................................... 21 3 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AGCTCCACTAACCTAGTTTTG........................................................................................... 21 3 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AGTTCCACTAATCAACCGTTG........................................................................................... 21 3 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................AAATATTGAGCGGATTCG................................................................................. 18 2 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

TTACACTTGATCGTTATTTTGTGCTCTTCTGGCTTGAATGCCGCCCCACGGACGAGCTCAACGTGTCAAGTTTTCGACTTTCGAATCCGCTCAAAACTTGATTAGTGGAACTCGTGCGTAGGGCAGAAGCGCGAGCTGCTCTTGAAAGCGACACCACATGAA
************************************....((((((((((.((((((((.((...(((((((((..((..........))..)))))))))...)).)))))))).)))))))))).*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060665
9_females_carcasses_total
 V053
head
 SRR060689
160x9_testes_total
 SRR060657
140_testes_total
 SRR060671
9x160_males_carcasses_total
................................................................................................CTTGATTAGTGGAACTCGTGCGTAGGGCA..................................... 29 0 1 1.00 1 1 0 0 0 0
...CGCTTGATCTTTATTTTGTCC.......................................................................................................................................... 21 3 3 0.33 1 0 1 0 0 0
...........................................................................................................GAACTCTTGAGTAGGGCGG.................................... 19 3 10 0.30 3 0 0 3 0 0
.........................................................................................TTCAAAACGTGGTTAGTGGA..................................................... 20 3 4 0.25 1 0 0 0 1 0
...CGCTTCATCGTTATTTTGTTC.......................................................................................................................................... 21 3 4 0.25 1 0 1 0 0 0
...............................................................TGTGAAGTTTTCGTCTTTC................................................................................ 19 2 8 0.13 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12928:1264060-1264221 - dvi_69 TTCAT-----GTGGTGTCGCTTTCAAGAG-C-AGCTCG--CGCTTCTGCCCTACGCACGAGTTCCACTAATCAAGTTTTGAGCGG--ATTCGAAAGTCGAAAACTTGACACGTTGAGCTCGTCCGTGGGGCGGCATTCAA-------GCCAGAAGAGC--ACA--------------AAATAACGATCAAGTGTAA
droMoj3 scaffold_6473:13724318-13724399 + dmo_81 ---------------------------------------------CTGTCCTACGAGCGAGTTCCACTAATCAAGTTTTGAG--T--GTTCGAAAATCAAAAACTTGACACGTTGAGCTCGTCTGTGTGGC-----------------------------------------------------------------
droGri2 scaffold_15203:8445728-8445859 + dgr_54 ATTC-----GGTTTGTTCTTTTAC-AGCAGTGCATCCG--GGTGTCTGCCACACTTACGAGTTCCACTATTCAAGTTTTGAG--CGTATT-TGAAATCAAAAACTTGACACGTTGAGCTCGTGTGTGCGTTGCG----------------GAA--------------------------------------ATCAA
droWil2 scf2_1100000004909:12029396-12029483 + dwi_49 T-------------------------------------------CCTGTCCTACGCATGAGTTCCACTAAGCAAGTTTTGGGCAT--ATTTCAAAAACAAAAACTTGACACGTTGAGCTCGTCTGTGTGACAG---------------------------------------------------------------
dp5 XL_group3a:1977513-1977624 - dps-mir-969 ATAATTCCTG-----G------------AAGCCATCTA--GGAGCCTGTTCTACGTGCGAGTTCCACCATGCAAGTTTTGAG--CGTATA-TGAATCCAAAAACTTGACACGTTGAGCTCGTGCGTGGTGCAGC--------------------------------------------------------------
droPer2 scaffold_11:2701266-2701377 + dpe_84 ATAATTCCTG-----G------------AAGCCATCTA--GGAGCCTGTTCTACGTGCGAGTTCCACCATGCAAGTTTTGAG--CGTATA-TGAATCCAAAAACTTGACACGTTGAGCTCGTGCGTGGTGCAGC--------------------------------------------------------------
droAna3 scaffold_13335:1607990-1608077 - dan_60 T-------------------------------------------TCTGTTTTACGTGCGAGTTCCACTAAGCAAGTTTTGAGAAT--TTTTTAAAAACAAAAACTTGACACGTTGAGCTCGTCCGTGGGGCAG---------------------------------------------------------------
droBip1 scf7180000395454:59943-60030 + T-------------------------------------------TCTGTTTTACGTGCGAGTTCCACTAAGCAAGTTTTGAGAAT--TTTTTAAAAACAAAAACTTGACACGTTGAGCTCGTCCGTGGGGCAG---------------------------------------------------------------
droKik1 scf7180000302696:1720111-1720193 + --------------------------------------------TCTGAGCTACGCGCGAGTTCCACTAAGCAAGTTTTGAGAAT--ATTTC-AATACAAAAACTTGACACGTTGAGCTCGTTTGTGGGG------------------------------------------------------------------
droFic1 scf7180000453872:337535-337622 - ---------------------------------------------CTGTTCTACGTGCGAGTTCCACTAGGCAAGTTTTGAGATCGTTTTTAAAAAACAAAAACTTGACACGTTGAGCTCGTTCGTGGGATGG---------------------------------------------------------------
droEle1 scf7180000491193:225600-225709 + CACG-----GGT----------------A-ATCTCCCAAAAATCTCTGTCCTACGTACGAGTTCCACTAAGCAAGTTTTGAGATCGTT-TTTAAAAACAAAAACTTGACACGTTGAGCTCGTTCGTGGGATGG---------------------------------------------------------------
droRho1 scf7180000779986:498546-498691 - --------------------------------------------TCTGTCCTACGTACGAGTTCCACTAAGCAAGTTTTGAGATC--GTTTTAAATACAAAAACTTGACACGTTGAGCTCGTTTGTGGGACGGGCT----ACTTCAATTCAAAAGAATATTCGAAATAAACCAAGAAAATTAATGAGTTTTTGTAA
droBia1 scf7180000301760:584988-585074 - ---------------------------------------------CTGTGCCACGTCCGAGTTCCACTAAGCAAGTTTTGAGATC--GTTTTAAATACTAAAACTTGACACGTTGAGCTCGTTTGTGGCTTGGC--------------------------------------------------------------
droTak1 scf7180000415843:458201-458325 - --------------------------------------------TCTGTCCTACGTGCGAGTTCCACTAAGCAAGTTTTGAGATC--GTTTTAAAAACAAAAACTTGACACGTTGAGCTCGTTCGTGGAATGGCGCCCAA-------CTTCAAAGA----AAA--------------GACTGATAATAAAATACAA
droEug1 scf7180000408176:664491-664622 - --------------------------------------------TCTGTTCTACGTGCGAGTTCCACTAAGCAAGTTTTGAGATCGTTTTTTAAAAACAAAAACTTGACACGTTGAGCTCGTTCGTGGGATGGACT----TCATCAGCTTGAAAGCCTGCTTAAAATAAACTAAG----------------AATGA
dm3 chrX:18018386-18018480 + dme-mir-969 C----------------------------------CCA--AGTCTCTGTCCTACGTCCGAGTTCCACTAAGCAAGTTTTGAGATC--GTTTTAAAAACAAAAACTTGACACGTTGAGCTCGTTCGTGGGATGG---------------------------------------------------------------
droSim3 chrU_M_7032:242-353 + GTG---------------GCGTTCGGGGA-A-TCCCCA--AGTCTCTGTCCTACGTCCGAGTTCCACTAAGCAAGTTTTGAGATC--GTTTTAAAAACAAAAACTTGACACGTTGAGCTCGTTCGTGGGATGG---------------------------------------------------------------
droSec2 scaffold_8:326568-326679 + dse_88 GTG---------------GCGTTCGAGGA-A-TCCCCA--AGTCTCTGTCCTACGTCCGAGTTCCACTAAGCAAGTTTTGAGATC--GTTTTAAAAACAAAAACTTGACACGTTGAGCTCGTTCGTGGGATGG---------------------------------------------------------------
droYak3 X:16642326-16642414 + dya_48 C------------------------------------------CTCTGTCCTACGTCCGAGTTCCACTAAGCAAGTTTTGAGATC--GTTTTAAAAACAAAAACTTGACACGTTGAGCTCGTTTGTGGGATGG---------------------------------------------------------------
droEre2 scaffold_4690:8345996-8346128 + der_63 GTCAT-----GAG---TTGCGTTTGGGAA-G-TTCCCA--AATCTCTGTCCTACGTCCGAGTTCCACTAAGCAAGTTTTGAGATC--GTTTTAAAAACAAAAACTTGACACGTTGAGCTCGTTCGTGGGATGGATT----ACTGC----CGAAAG-----------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TTCAT-----GTGGTGTCGCTTTCAAGAG-C-AGCTCG--CGCTTCTGCCCTACGCACGAGTTCCACTAATCAAGTTTTGAGCGG--ATTCGAAAGTCGAAAACTTGACACGTTGAGCTCGTCCGTGGGGCGGCATTCAA-------GCCAGAAGAGC--ACA--------------AAATAACGATCAAGTGTAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body
.....................................................................................................AACTTGACACGTTGAGCTCGT..........................................................................211252.0025267871102002000043611010411460001181130000000300000000000000000220317
...........................................................AGTTCCACTAATCAAGTTTTG....................................................................................................................211217.0021702320000000000021108171910019160000000000000000000000000000000000101592
...........................................................AGTTCCACTAATCAAGTTTTGA...................................................................................................................221210.002100000000000000050271024181109170000000100000000000000000000000000000421
...................................................................................................AAAACTTGACACGTTGAGCTCG...........................................................................221110.00110019510000000000231001267087000000010000000010000000000000000000082
....................................................................................................AAACTTGACACGTTGAGCTCG...........................................................................21197.0097019010400000000256261020126000000000000000010000000000000000000030
....................................................................................................AAACTTGACACGTTGAGCTCGT..........................................................................22138.0038040000000000001620130054000000000000000000000000000000000010020
.....................................................................................................AACTTGACACGTTGAGCTCG...........................................................................20130.003022000300010000310100110000003212010000000000000000000000002040
...........................................................AGTTCCACTAATCAAGTTTT.....................................................................................................................20116.001600400000000000210111000000000000000000000000000000000000000060
..........................................................GAGTTCCACTAATCAAGTTTT.....................................................................................................................21114.001400200000000000211201020000000000000000000000000000000000000030
...................................................................................................AAAACTTGACACGTTGAGCTC............................................................................21113.001312100000000000040000030000000000000000000000000000000000000020
...........................................................AGTTCCACTAATCAAGTTTTGAG..................................................................................................................2319.00900000000000000400200003000000000000000000000000000000000000000
..................................................................................................GAAAACTTGACACGTTGAGCTCG...........................................................................2317.00700000000000000101030010000000000000000000000000000000000000010
...........................................................AGTTCCACTAATCAAGTTT......................................................................................................................1915.00500300000000000000000000000000000000000000000000000000000000020
.....................................................................................................AACTTGACACGTTGAGCTCGTC.........................................................................2214.00410100100000000000000000000000000000000000000000000000000001000
....................................................................................................AAACTTGACACGTTGAGCTC............................................................................2014.00401000000000000200010000000000000000000000000000000000000000000
...................................................................................................AAAACTTGACACGTTGAGCTCGT..........................................................................2314.00400000000000000100001011000000000000000000000000000000000000000
............................................................GTTCCACTAATCAAGTTTTG....................................................................................................................2014.00400400000000000000000000000000000000000000000000000000000000000
..........................................................GAGTTCCACTAATCAAGTTT......................................................................................................................2014.00400000000000000001002000000000000000000000000000000000000000010
.....................................................................................................AACTTGACACGTTGAGCTCGTCC........................................................................2313.00300000100000000000000000000000000010000010000000000000000000000
......................................................................................................ACTTGACACGTTGAGCTCGT..........................................................................2012.00200100000000000000000010000000000000000000000000000000000000000
............................................................................................AAAGTCGAAAACTTGACACGTTGAGCT.............................................................................2712.00202000000000000000000000000000000000000000000000000000000000000
..................................................................................................GAAAACTTGACACGTTGAGCT.............................................................................2112.00200000000000000000200000000000000000000000000000000000000000000
...............................................................................GAGCGG--ATTCGAAAGTCG.................................................................................................1811.00101000000000000000000000000000000000000000000000000000000000000
............................................................GTTCCACTAATCAAGTTTTGA...................................................................................................................2111.00100100000000000000000000000000000000000000000000000000000000000
......................................................................................................ACTTGACACGTTGAGCTCG...........................................................................1911.00100000000000000010000000000000000000000000000000000000000000000
.....................................................................................................AACTTGACACGTTGAGCT.............................................................................1811.00100000000000000000000001000000000000000000000000000000000000000
....................................................................................G--ATTCGAAAGTCGAAAACTTGA........................................................................................2211.00101000000000000000000000000000000000000000000000000000000000000
....................................................................................................AAACTTGACACGTTGAGCT.............................................................................1911.00100000000000000000100000000000000000000000000000000000000000000
.................................................................................................CGAAAACTTGACACGTTGAGC..............................................................................2111.00100000000000000000000000000000000000000000000000000000000000010
............................................................................................AAAGTCGAAAACTTGACACGTTGAGC..............................................................................2611.00100100000000000000000000000000000000000000000000000000000000000
.....................................................................................................AACTTGACACGTTGAGCTC............................................................................1911.00101000000000000000000000000000000000000000000000000000000000000
......................................................................................................ACTTGACACGTTGAGCTCGTC.........................................................................2111.00110000000000000000000000000000000000000000000000000000000000000
..........................................................GAGTTCCACTAATCAAGTT.......................................................................................................................1911.00100000000000000000000000000000000000000000000000000000000000010
..........................................................GAGTTCCACTAATCAAGTTTTG....................................................................................................................2211.00100100000000000000000000000000000000000000000000000000000000000
.........................................................CGAGTTCCACTAATCAAGTTT......................................................................................................................2111.00100000000000000000000000000000000000000000000000000000000000010
droMoj3
---------------------------------------------CTGTCCTACGAGCGAGTTCCACTAATCAAGTTTTGAG--T--GTTCGAAAATCAAAAACTTGACACGTTGAGCTCGTCTGTGTGGC-----------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		V060
Head		V110
Male-body
No Reads
droGri2
ATTC-----GGTTTGTTCTTTTAC-AGCAGTGCATCCG--GGTGTCTGCCACACTTACGAGTTCCACTATTCAAGTTTTGAG--CGTATT-TGAAATCAAAAACTTGACACGTTGAGCTCGTGTGTGCGTTGCG----------------GAA--------------------------------------ATCAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
T-------------------------------------------CCTGTCCTACGCATGAGTTCCACTAAGCAAGTTTTGGGCAT--ATTTCAAAAACAAAAACTTGACACGTTGAGCTCGTCTGTGTGACAG---------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
dp5
ATAATTCCTG-----G------------AAGCCATCTA--GGAGCCTGTTCTACGTGCGAGTTCCACCATGCAAGTTTTGAG--CGTATA-TGAATCCAAAAACTTGACACGTTGAGCTCGTGCGTGGTGCAGC--------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
ATAATTCCTG-----G------------AAGCCATCTA--GGAGCCTGTTCTACGTGCGAGTTCCACCATGCAAGTTTTGAG--CGTATA-TGAATCCAAAAACTTGACACGTTGAGCTCGTGCGTGGTGCAGC--------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
T-------------------------------------------TCTGTTTTACGTGCGAGTTCCACTAAGCAAGTTTTGAGAAT--TTTTTAAAAACAAAAACTTGACACGTTGAGCTCGTCCGTGGGGCAG---------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
T-------------------------------------------TCTGTTTTACGTGCGAGTTCCACTAAGCAAGTTTTGAGAAT--TTTTTAAAAACAAAAACTTGACACGTTGAGCTCGTCCGTGGGGCAG---------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
--------------------------------------------TCTGAGCTACGCGCGAGTTCCACTAAGCAAGTTTTGAGAAT--ATTTC-AATACAAAAACTTGACACGTTGAGCTCGTTTGTGGGG------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
---------------------------------------------CTGTTCTACGTGCGAGTTCCACTAGGCAAGTTTTGAGATCGTTTTTAAAAAACAAAAACTTGACACGTTGAGCTCGTTCGTGGGATGG---------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
CACG-----GGT----------------A-ATCTCCCAAAAATCTCTGTCCTACGTACGAGTTCCACTAAGCAAGTTTTGAGATCGTT-TTTAAAAACAAAAACTTGACACGTTGAGCTCGTTCGTGGGATGG---------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
--------------------------------------------TCTGTCCTACGTACGAGTTCCACTAAGCAAGTTTTGAGATC--GTTTTAAATACAAAAACTTGACACGTTGAGCTCGTTTGTGGGACGGGCT----ACTTCAATTCAAAAGAATATTCGAAATAAACCAAGAAAATTAATGAGTTTTTGTAASizeHit CountTotal NormTotal
No Reads
droBia1
---------------------------------------------CTGTGCCACGTCCGAGTTCCACTAAGCAAGTTTTGAGATC--GTTTTAAATACTAAAACTTGACACGTTGAGCTCGTTTGTGGCTTGGC--------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
--------------------------------------------TCTGTCCTACGTGCGAGTTCCACTAAGCAAGTTTTGAGATC--GTTTTAAAAACAAAAACTTGACACGTTGAGCTCGTTCGTGGAATGGCGCCCAA-------CTTCAAAGA----AAA--------------GACTGATAATAAAATACAASizeHit CountTotal NormTotal
No Reads
droEug1
--------------------------------------------TCTGTTCTACGTGCGAGTTCCACTAAGCAAGTTTTGAGATCGTTTTTTAAAAACAAAAACTTGACACGTTGAGCTCGTTCGTGGGATGGACT----TCATCAGCTTGAAAGCCTGCTTAAAATAAACTAAG----------------AATGASizeHit CountTotal NormTotal
No Reads
droSim3
GTG---------------GCGTTCGGGGA-A-TCCCCA--AGTCTCTGTCCTACGTCCGAGTTCCACTAAGCAAGTTTTGAGATC--GTTTTAAAAACAAAAACTTGACACGTTGAGCTCGTTCGTGGGATGG---------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droSec2
GTG---------------GCGTTCGAGGA-A-TCCCCA--AGTCTCTGTCCTACGTCCGAGTTCCACTAAGCAAGTTTTGAGATC--GTTTTAAAAACAAAAACTTGACACGTTGAGCTCGTTCGTGGGATGG---------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
C------------------------------------------CTCTGTCCTACGTCCGAGTTCCACTAAGCAAGTTTTGAGATC--GTTTTAAAAACAAAAACTTGACACGTTGAGCTCGTTTGTGGGATGG---------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body
No Reads
droEre2
GTCAT-----GAG---TTGCGTTTGGGAA-G-TTCCCA--AATCTCTGTCCTACGTCCGAGTTCCACTAAGCAAGTTTTGAGATC--GTTTTAAAAACAAAAACTTGACACGTTGAGCTCGTTCGTGGGATGGATT----ACTGC----CGAAAG-----------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		M060
Embryo		V040
Embryo		V107
Male-body		V108
Head
No Reads

Generated: 04/16/2014 at 10:13 AM