ID:

dvi_6850

 Coordinate:

scaffold_12875:14359500-14359794 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.7 -12.5 -12.5

Flybase annnotation

CDS [Dvir\GJ22092-cds]; exon [dvir_GLEANR_7403:3]; CDS [Dvir\GJ22092-cds]; exon [dvir_GLEANR_7403:4]; intron [Dvir\GJ22092-in]

No Repeatable elements found

Sense Strand Reads

##################################################-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TGGACCATGACGATGATGACGATGAGGAACAGGCGCGTCACACCGAAGCCGTAAGTATTTAATGTTCTCGCTTTCAGCAATTGTTGCTTGCATTTTTGACTTTTTATTTAAATAAAATACACACTCATCTCAAATAATTTGCCGTATGCCTGCGCAGTTTTATGCCCAGTCCGTTTATGCCGCCCAACAAACCGTAAGTGCATGCATCCCACATTTGTCTTTTCCATGTGTCGTACGCTTCTGTGTTTGTTGCGCCTCTTCAGCTAATTCTTTATAAATCTGTATTATATGTCCGATTCGCTTTGTGCTTCTGCTCATATTGATTACATACATTTTTCCCTGCAGGATCAGGTTAGCTATCGCCCAGCGCCCACCGAACGCACCCCCATCCTGTC
******************************************************************************************************************************************************************************************************************************.....((((((.((((....)))).))..))))........................(((((....((((.....(((...((.((....)).))...)))......)))).......)))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060656
9x160_ovaries_total
 SRR060678
9x140_testes_total
 SRR060659
Argentina_testes_total
 SRR060681
Argx9_testes_total
 SRR060679
140x9_testes_total
 SRR060676
9xArg_ovaries_total
 SRR060683
160_testes_total
 V116
male body		 V047
embryo
 M061
embryo
 SRR060655
9x160_testes_total
 SRR060657
140_testes_total
 SRR060660
Argentina_ovaries_total
 SRR060665
9_females_carcasses_total
 SRR060670
9_testes_total
 SRR060671
9x160_males_carcasses_total
 SRR060674
9x140_ovaries_total
 SRR060677
Argx9_ovaries_total
 SRR060687
9_0-2h_embryos_total
 V053
head
 SRR060663
160_0-2h_embryos_total
 SRR060658
140_ovaries_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060675
140x9_ovaries_total
 SRR060682
9x140_0-2h_embryos_total
..............................................................................................................................................................................................................................................................................................................................ATTGATTACATACATTTTTCCCTGCAG.................................................. 27 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TCCATGTGTCGTACGCTTCT......................................................................................................................................................... 20 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................CGTACGCTTCTGTGTTTGTTG............................................................................................................................................... 21 0 1 2.00 2 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................................................TTAGCTATCGCCCAGCGCCCA...................... 21 0 1 2.00 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..........CGATGATGACGATGAGGAACAGGCGC....................................................................................................................................................................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................................................................CGCCCACCGAGCGCACCCCCA....... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................TGTATTATATGTCCGATTCGCT............................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................................................CCAGCGCCCACCGAACGCACCC.......... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................GATGAGGAACAGGCGCGTCAC.................................................................................................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................................CATTTTTCCCTGCAGGATCAG............................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TTCCATGTGTCGTACGCTTCT......................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................GCCTCGTCATCTAATTCTT........................................................................................................................... 19 2 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
TGGACCATGACGATGATGACGA..................................................................................................................................................................................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........CGATGATGACGATGAGGAACAGGCG........................................................................................................................................................................................................................................................................................................................................................................ 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............TGATGACGATGAGGAACAGT.......................................................................................................................................................................................................................................................................................................................................................................... 20 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................................................GTTAGCTATCGCCCAGCGCCC....................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................GTTTGTTGCGCCTCTTCA..................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................AGTCGCTTTGTGCTTCTGCTC............................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................AAATAGTTTGCCGTATGCCTG................................................................................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................TGTTCTCGCTTTCAGCAATTG........................................................................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TTGTCTTTTCCATGTGTCGTA................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................CGCTTTCAGCAATTGTTGCTT.................................................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........ACGATGATGACGATGAGGAAC............................................................................................................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................................................................CACCGAACGCACCCCCATCCT... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............GATGACGATGAGGAACAG........................................................................................................................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................TATGTCCGATTGGCTTTGTCC....................................................................................... 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................................TGATCAGGTTAGCTATCGCCC.............................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................................CGATCAGGTTAGCTATCGCC............................... 20 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................................................TTAGCTATCGCCCCGCGCCCA...................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................AACAAACCGTAAGTGCATGCA............................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................................................TTTTTCCCTGCAGGATCGGGT.......................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................................................AGCTATCGCCCAGCGCCCACCGAACG............... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................TGACGATGAGGAACAGGCGCG...................................................................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................TTTATGCCGCCCAACAAACCG......................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........CGATGATGACGATGAGGA............................................................................................................................................................................................................................................................................................................................................................................... 18 0 4 0.50 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0
..GACCGGGACGATGATGACGGT.................................................................................................................................................................................................................................................................................................................................................................................... 21 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TTTGTCTTTTCGAAGTGTGG.................................................................................................................................................................. 20 3 15 0.33 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 2 1 0
................TGACGGTGAAGAACAGGC......................................................................................................................................................................................................................................................................................................................................................................... 18 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.....................................................................................................................................................................................................................TTTGTCTTTTCGAAGTGT.................................................................................................................................................................... 18 2 13 0.15 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.............................................................................................................................................................................................................ATTCCACATTTGTCCTTTC........................................................................................................................................................................... 19 2 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.....................................................................................................................................................................................................................TTTGTCTTTTCGAAGTGTGGT................................................................................................................................................................. 21 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.......TGACGATGATGACGATGA.................................................................................................................................................................................................................................................................................................................................................................................. 18 0 8 0.13 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........CGATTATGACGATGAGGA............................................................................................................................................................................................................................................................................................................................................................................... 18 1 8 0.13 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................GGTGAGGAACAGGCTGGT..................................................................................................................................................................................................................................................................................................................................................................... 18 3 20 0.10 2 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......TGGCGATGGTGACGATGAGG................................................................................................................................................................................................................................................................................................................................................................................ 20 2 11 0.09 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........ACAATTCTGACGATGAGGAA.............................................................................................................................................................................................................................................................................................................................................................................. 20 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................CGCTTTGTGCTCCTGCTA............................................................................... 18 2 17 0.06 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................CAATTTGCCGTATGCCTGAC................................................................................................................................................................................................................................................. 20 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........GACGACGATGACGATGAGGAAGA............................................................................................................................................................................................................................................................................................................................................................................ 23 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TGGCTGCGCAGTTTTATG....................................................................................................................................................................................................................................... 18 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
........................................CACCGAAGCCGTTACAATT................................................................................................................................................................................................................................................................................................................................................ 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
...........GATGATGAGGCTGAGGAACC............................................................................................................................................................................................................................................................................................................................................................................ 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

ACCTGGTACTGCTACTACTGCTACTCCTTGTCCGCGCAGTGTGGCTTCGGCATTCATAAATTACAAGAGCGAAAGTCGTTAACAACGAACGTAAAAACTGAAAAATAAATTTATTTTATGTGTGAGTAGAGTTTATTAAACGGCATACGGACGCGTCAAAATACGGGTCAGGCAAATACGGCGGGTTGTTTGGCATTCACGTACGTAGGGTGTAAACAGAAAAGGTACACAGCATGCGAAGACACAAACAACGCGGAGAAGTCGATTAAGAAATATTTAGACATAATATACAGGCTAAGCGAAACACGAAGACGAGTATAACTAATGTATGTAAAAAGGGACGTCCTAGTCCAATCGATAGCGGGTCGCGGGTGGCTTGCGTGGGGGTAGGACAG
**************************************************.....((((((.((((....)))).))..))))........................(((((....((((.....(((...((.((....)).))...)))......)))).......)))))****************************************************************************************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V116
male body		 SRR060679
140x9_testes_total
 SRR060659
Argentina_testes_total
 SRR060675
140x9_ovaries_total
 SRR060688
160_ovaries_total
 M028
head
 SRR060658
140_ovaries_total
 M047
female body
 SRR060673
9_ovaries_total
 SRR060676
9xArg_ovaries_total
 SRR060678
9x140_testes_total
 SRR060680
 9xArg_testes_total
 SRR060683
160_testes_total
 SRR060689
160x9_testes_total
 V053
head
 SRR060682
9x140_0-2h_embryos_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060687
9_0-2h_embryos_total
 SRR060672
9x160_females_carcasses_total
 M027
male body		 SRR060667
160_females_carcasses_total
 SRR060666
160_males_carcasses_total
 SRR060686
Argx9_0-2h_embryos_total
...........................................................................................................................................................................................................CGTAGGGTGTAAACAGAAAAG........................................................................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................GAAGAAGTCGATTAAGAGA.......................................................................................................................... 19 2 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................TATGTGTGAGTAGAGTTTATT.................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................GCGAAAGTCGTTAACAACGAA.................................................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................ACGGGTCAGGCAAATACGGC..................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................................GGGACGTCCTAGTCCAATCGA..................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................GGTACACAGCATGCGAAGAC........................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................CAATGTATGTAAAAAGGGACG.................................................... 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................GACACAGACAACGCGGAGGAG...................................................................................................................................... 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................CACAGCGTGCGAAGACACAAA................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................TTATTTTGTGTGTGAGTAGAG........................................................................................................................................................................................................................................................................ 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................GTGTGAGTAGAGTTTATTAAA............................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................CTCAGCATGCGGAGACACAAAC.................................................................................................................................................. 22 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................................................GGTCGCGGGTGGCTTGCGTG............ 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................CGGCGGGTTGTTTGGCATTCA.................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................AAATACGGCGGGTTGTTTGGCAT....................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................GCGGGTTGTTTGGCATTCA.................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................CGTACGTAAGGTGTAAACAGG............................................................................................................................................................................... 21 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................GGAGGAGTCGATTAAGAAATA........................................................................................................................ 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................................................ATCGATAGCGGGTCGCGGGTG..................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................................................................GGGTCGCGGGTGGCTTGCGT............. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................GCGGAGAAGTCGATTACGAAAAT........................................................................................................................ 23 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................AGGTGTAAACAGAAAAGGTAC....................................................................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................ACAAGAGCGAAAGTCGTTA.......................................................................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................AAAGGGACGTCCTAGTCCAAT........................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................................CGTCCTAGTCCAATCGATAGC................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..TTGGTACTGCTACTACTGCTAC................................................................................................................................................................................................................................................................................................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................TTTGGCATTCACGTACGTAAG.......................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................TCGTTTTAGAAATACTTAGACA................................................................................................................ 22 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................ATGTAAGAACGGACGTGCTAG.............................................. 21 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................ACGAAGACGAGTATAACCGA...................................................................... 20 2 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................ACGTTTGGTCTAAACAGAAA............................................................................................................................................................................. 20 3 20 0.25 5 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 1 1
...........................................................................................................................................................................................GTTTGGCAGTCACCTACGTC............................................................................................................................................................................................ 20 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
................................................................................................................................................................................................................................................................AGAAGCCGATTAAGAAAGA........................................................................................................................ 19 2 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................TGTAAGAACGGACGTGCTAG.............................................. 20 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.....................................................................................................................................................................................................................................................................................................................................................CGTTCTAGTCCAATCGGCA................................... 19 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..............................................................................................................................................................................................................................................................GCAGAAGTCCATTAAGAA........................................................................................................................... 18 2 11 0.09 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................GATGGTACTCAGCATGCG............................................................................................................................................................. 18 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................TCATAGCACGGGTCAGGC.............................................................................................................................................................................................................................. 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12875:14359450-14359844 + dvi_6850 TG--G---ACCATGACGATGAT------GACGATGAGGAACAGGCGCGTCACACCGAAGCCGTAAGTATTTAATGTTCTCGCTTTCAGCAATT-----------------------------------------GTTG--------------------------CTTGCATTT--T-TGACTTTTT-ATTTAAATAAAATACACA---CTCATCTCAA--ATAATTTGCCGTATGC-CTGC-GCAGTTTTATGCCCAGTCCGTTTATGCCGCCCAACAAACCGTAAGTGCATGCATC----------CCACAT-T-TGTCTT-TT-----------------------------------------------------CCATGTGTC-----GT--ACGCTTCTGTGTTTGTTGCGCC--TCTTCA--G-------------CTA---AT----TCTTTATAAATCTGTAT-TATAT-----GTCCGA---------T-TCGCTTTGTGCTT-CTGCTCATA----TTGA-TTACATACATTT----T--TC----------------------------------------CCTGCAGGATCAGGTTAGCTATCGCCCAGCGCCCACCGAACGCACCCCCATCCTGTC
droMoj3 scaffold_6496:9820636-9821035 + dmo_1065 CG--G---ACAACGACGATGATGCCGACAATGATGAGGAGCAAGCGCGTCGCAGCGAAGCTGTGAGTATACCTGGCTTTTGTGC-------------T-------------------------CTTCCAATTTCA--GC------------------------TATTGCATTT--TATGATTTCG-----------------------CTCATCTAAT--ATAATTCGA----CGCACGGC--CAGTTTTATGCACAGTCCTTTTATGCCGTACCGCAAACCGTAAGTGCATGTCTATCG-------AGT-GCTA-TGTCCT----------------------------------------------------------TTCTAATCGCTAGT-------TTTGTACGTGTGCCGCT--TCTTAACTGCTTACTGTATTTGCTGTAGAATATATATATATAAATCTGTGTATATAT-----G---------------------------------------------------------TTA---------ATTATATTATTTTGATACGCTCATTAACAATTTTATTATCCACGCAGGATCAGGTCAGCTTTCGTTCACCGGCCACTGAGCGTACGCCCATTCTGGC
droGri2 scaffold_15245:14342788-14343219 + CG--G---AAAACGGTGATGAT------GATGATGAGGAACAGGCGCGCCACAGCGAAGCCGTGAGTATTTCTAC--------------------------------------T----CAT--TTACCCAATCCA---------------------------GTTTTGCATTT--T-TGATTTCTTCAACTAAATTAAACACACAATACTCATTCAAACCAAAATTTGGCGTATGCTCG--CGCAGTTTTTTAGCCATTCCGGTTATGCTGAATATCAAACCGTAAGTGCATGCATC-C--------AGC-AAAT-TGCTTTTTCCCGTGTGTTATACGCTCTCCTCTCTCTTTCTCTCTCTCTCTATTTGTGTTGTGTGGTATCCTAGACAGT--TCTCTTTTCTACAAATATTAAT--ATAT--------------------AT---------------------GT--A----T--------------ATCCATT-TAATATTGACCTAGTTACTTATA----TT---AATTGTATATTTCT-A---------------------------------------------ACTGCAGGATCAAGTCAGCTATAGACCCTTGCCCACTGAGCGCACCCCCATCCTGAC
droWil2 scf2_1100000004513:14223-14300 + CA--G---AGAACAATGA---C------AATGATGAGGAGGAAGCACGTCATAATGCAAGTGTAAGTAACTTTAACTTATATTTTTAGCAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 3:3640267-3640645 + AG--G---AGCAT---------------GGCGACGAGGAGCAAGTGCGCCACAACGATGCCGTAAGTATTCCCT---------TTCGGCAATTATGCTGATTCAAGCGAGAACCAATGGC-CTCCTCCGCATGTT-----CAGATAGTCCGAATTC-CCTATTTTTGGAGAAT--T-TAATTTCTT-AAGTGTATCC-----AT------------------GTTCGCGTGTTTGCTCGGCTGTAGTTGGTAGTCATGCCTGGGTATGGCATTTCGGAAACCGTAAGTGCATGATTC----------AGT-GT-T-TGCTTTCCC------------------------------------------------------------------TAA--TGGCTTCTGTAATATTTGCGCGCTTTGAC-----------------CCAC-GAA--------------------------TATCCA------C------------------------------GAATCAATCAATAATCGAATCTTTCC-TA--CT----------------------------------------CTTGCAGG---AAATCAGCTACAGATCGACACCAACGGAGCGCACACCAATCTTGGC
droPer2 scaffold_2:3830507-3830884 + AG--G---AGCAT---------------GGCGACGAGGAGCAAGTGCGCCACAACGATGCCGTAAGTATTCCCT---------TTCGGCAATTATCCTGATTCAAGCGAGAACCAATAGC-CTCCTCCGCATGTT-----CAGATAGTCCGAATTC-CCTATTTTTGGAGATT--T-TAATTTCTT-AAGTGTATCC-----AT------------------GTTCGCGTGTTTGCTCGGCTGTAGTTGGTAGTCATGCCTGGGTATGGCATTTCGGAAACCGTAAGTGCATGATTC----------AGT-GT-T-TGCTTTCCC------------------------------------------------------------------TAA--TGGCTTCTGTAATATTTGCGCGCTTTGAC-----------------CCAC-AAA--------------------------TATCCA------C------------------------------GAATCAATCAA-AATCGAATCTTTCC-TA--CT----------------------------------------CTTGCAGG---AAATCAGCTACAGATCGACGCCAACGGAACGCACACCAATCTTGGC
droAna3 scaffold_13266:4971049-4971404 + AG--G---AGCAG---------------GATGACGAGGAACAGGTGCGCCACCAAGATGCCGTAAGTATCTGTTAC---AGTTCCC-----------TA------------ATC----GCC--GTT--------GTAGCTCC-TGCATCC-GCCTCCCCATTTCTTTGCAATT--T-TAATTTCAA-AATTATCCTC-----AC--------------------------ATTTTCCCGGCCATAGTTGGTGGCCAGTACGGGGTACGGCTACTCGGAAATCGTAAGTGCAATCATA----------TCT-GT-T-TGGTTTTTG-----------------------------------------------------AGGGTTGCAGTCCAGTCTTTGCTTTTGTATAATTCGCGCT--TAAC--------------------AC---------------------GT--G----T-----------GTCCTTGTTT-T----------------------GAAAAGAA-AAACTAACTATTTC-TA--TT----------------------------------------TCTGCAGG---AGATCAGCTACAGATCACCGCCCACCGAGCGCACTCCGATCCTCTC
droBip1 scf7180000395751:780901-781259 + AG--G---AGCAC---------------GACGACGAGGAACAGGTGCGCCACCAAGATGCGGTAAGTATCGGTTCC---AGTTC-T-----------CG------------ATC-CT-G---------GCACTCTTAGCTCCT-GCTTCC-GCGCCCCCATT-CTTTGCAATT--T-TAATCCCCA-AATTATCCTC-----GA--------------------------ATTCTCCCGGCCGTAGTGTGTGGTCAGTACGGGGCACGGCTACTCGGAAATCGTAAGTGCTATCATA----------TCT-GT-T-TGGTTTTTG-----------------------------------------------------GAGGTTGCTGTCCAGTCCCTGCTTTTGTAATATTCGCGCT--TCCAC----------------------AC------------------CT--G----------------CCCCTGGGTTTT----------------------GGAAAGAA-AATCTCACTTGTTTCTG--TT----------------------------------------CCTACAGG---AGATCAACTACCGATCACCGCCCACCGAGCGCACTCCCATCCTGGC
droKik1 scf7180000302682:51931-52297 - AG--G---AGGATCATGG---G------GATGATGAAGAGCAAATACGACACAATGATGCTGTGAGTATGAAGGGTAGCAGTGC-T-----------C---------------CTATGGCGCTCTTTTGTAT----TA--------------------TTTTATGTTGCTGTT--G-TGATTTCTT-AACTAAACTA-----AC------------------GT-------TTTGCTCGGCCTTAGTGTGTGGTCAGTTTGGGTTACGGCTCTTCGGAAACTGTAAGTGCATGAAAT-CGTGGAATCTCTCAG-CTTGCTTTGTC-------------------------------------------------------GATTATT-----TA--TGGCTTTTGTACATTTGGCGCT--TTGATATAG-------------CTAT-AAA--------------------------TGCTTA------TT-TTTTAGG-G----------------------TAAATGAG-TAACAAAATTTT-G-TAC-TT----------------------------------------TTTGCAGG---AAATCAACTACAGATCGGCACCCACCGAACGCACTCCCATTCTGGC
droFic1 scf7180000453811:98007-98345 - AG--G---AGCAG---------------GACGACGAGGAGCAGGTGCGCCACAACGATGCCGTAAGTATCAGTTTC---CGTTT-T-----------TA------------ATT----GAT--GTTCCGCATGCGG------------CC-GTCTTCCCATTATGCTGGGATT--T-TAATTTCTA-AGA---AA------------------------------------CTTGCTCGGCCGTAGTATGTAGTCAATTTGGGGTACGACTCTTCGGAAACCGTAAGTGCATGACTT----------TCT-GT-T-TGCTTTTTA-----------------------------------------------------CGTTGTGCTGGTCAGT--TCGCTTGTGTAAATATTGCGCT--TAGC-------------------------------------------AT--G----------------GATTTTCCCT-C----------------------AAAACGGA-ACACTTATTTGTCT-TA--CA----------------------------------------TTTTTAGG---AAATCAATTATAGATCGGTGCCCACCGAGCGCACTCCAATCCTGGC
droEle1 scf7180000491232:205592-205933 - AG--G---AGCAG---------------GACGACGAGGAGCAGGTGCGCCACAACGATGCCGTAAGTATCAGTTGC---AATTC-T-----------TG------------ATT----GAT--GTTCCGCATGCAGCGT--------------------ATTATGTTGCAACTATA-TAATTTCTA-AAACGTAC------------------------------------ATTGCTCGGCCGTAGTGTGTGGTCAGTTTGGGGTACGACTCTTCCGAAACCGTAAGTGCATGACAG----------TCT-GT-T-TGCTTTTCA-----------------------------------------------------CGGTGTGTTGGCCACT--CCGCTTGTGTACATTTCGCGCT--TTTGC------------------------------------------CC--A----------------GTCCCCAATT-T----------------------GCAACAAA-AGACTTATTTTA---------ATTTCACTAT------------------------------TTTGTAGG---AAATCAACTATAGATCGGCGCCCACCGAGCGTACTCCAATCCTCAC
droRho1 scf7180000780265:201167-201502 - AT--GACGAACAG---------------GACGACGAAGAGCAAGTGCGCCACAACGATGCCGTAAGTATCAGTTTC---AGTTT-T-----------TG------------AAA----AAT--ATTCCGCATGCGGCGT--------------------ATTATATAGCGACT--A-TAATTTCTA-AAACGTAC------------------------------------TTTGCTTGGCCGTAGTTTGTGGTCAGTTTTGGGTACGACTCTTCGGAAACCGTAAGTGCATGACTG----------TCT-TT-T-TGCTTTTCA-----------------------------------------------------CGTTGTGTTGGCCAGT--TCGCTTGTGTAAATTTCGCGCT--TTC---------------------------------------------C--G----------------ACCCTTGACT-T----------------------CAAACGAA-AGTCTCATTTGTTT-AA--CT----------------------------------------TTTGCAGG---AAATCAACTATAGATCGGCGCCCACCGAGCGTACTCCTATCCTCAC
droBia1 scf7180000302143:1237128-1237482 - AG--G---AACCG---------------GATGACGAGGAGCAGGTGCGCCACAACGATGCCGTAAGTATCAGTTCC---AGTTT-C-----------TG------------ATT----GGT--GTTCCGCATGCGAAGTACATTACACTCGGTCTCCCCATTATGTTCCGCTT--T-TGATTTCAA-AAACGTAC------------------------------------TTTGCTCGGCGGTAGTTTGTGGTCAAATTGGGGTACGACTCTTCGGAAACCGTAAGTGCATGATTG----------TAT-GT-T-TGCTTGTCT-----------------------------------------------------AGTTCTGTTGGCCACT--TCGCTTGTGTAAATCTCGCGCT--TTGC-------------------------------------------TC--G----------------GCTCTCAATT-T----------------------TAAGTAGA-AGGCTCATTTGACA-CA--AT----------------------------------------TTTGCAGG---AAATCAACTATAGGCCGACGCCCACCGAACGCACACCAATTCTTCC
droTak1 scf7180000415722:53873-54218 + AG--G---AACAG---------------GACGACGAGGAGCAGGTGCGCCACAACGATGCCGTAAGTATCAATTCC---ACTTT-T-----------CCA---C-------ATT----GAT--GTTCCGCATGCGAAGTACATTACACTCGGTCTCCCCATTATGTTGCGATT--T-TGATTTCTA-AAACGTAC------------------------------------TTTGCTCGGCGGTAGTTTGTGGTCAGTTTGGGGTACGAGTCGCCGGAAACCGTAAGTGCATGACTT------------------------TCCT-----------------------------------------------------TCTTGTGTTGGCCAGT--TCGCTTGTGTAAATTTCGCGCT--TTTC-------------------------------------------TC--G----------------TCTCTCAATT-G----------------------TAAATAGA-ATACTGATTTGTCT-CA--TG----------------------------------------CTTGCAGG---AAATCAACTACAGATCGGCGCCCACCGAGCGCACTCCAATCCTTGC
droEug1 scf7180000409474:771154-771517 - CGATGACGAACAG---------------GATGACGAGGAGCAGGTGCGCCACAACGATGCCGTAAGTATTACTTGC---AGTTTTT-------AT--TT------------ATT----GAT--GTTCTGCGTGCGGTGTATATTACCTATGGTCTCTCCATTATGTTGCGATT--T-TGATTTCTA-AAACGTAC------------------------------------TTTGCTCGGTCGTAGTTTGTGGTCAAAATGGGGTACGACTCTTCGGAAACCGTAAGTGCATGAATA----------TAT-GT-T-TGCTTTTCT-----------------------------------------------------CGTTGTGTTGGCCAAT-ATTGCTTGTGTACATTTTGCGCT--GTTC-------------------------------------------TT--T----------------GCCCTTGGTT-T----------------------TAAATAGA-AAGCTCATGTGTTT-CT--CT----------------------------------------TTTGCAGG---AAATCAACTACAGATCGGCGCCCACCGAGCGTACTCCAATCCTTTC
dm3 chr2R:17171576-17171933 + TG--G---AACAG---------------GACGACGAGGAGCAGGTGCGCCATAACGATGCGGTAAGTATCAGATTC---AGATTTT-----------TC------------ATT----GAT--GTTCCGCATGCGATGTACATTACACCCGGTCTC-CCAATATGTTGCAATT--A-TGATTTCAA-AAACGTAC------------------------------------TTTGCTCGGCGTTAGTGTGTGATCAGTTTTGGGTACGAAACTTCGAGAACTGTAAGTGCATGACTA----------TTT-CC-A-TGGTTTTCT-----------------------------------------------------TGTTATGTCTGCCATT-TTTGCTTATGTAAATCTTGCGCT--TTGC-------------------------------------------AC--G----------------CCACTCCATT-T----------------------TAAATAGT-TTAAAAATTCGTCT-TATTTT----------------------------------------ATTTTAGG---AAATCAACTATAGATCTGCTCCCACCGAACGTACTCCAATCCTTCC
droSim2 2r:17726016-17726371 + dsi_29037 TG--G---AACAG---------------GACGACGAGGAGCAAGTGCGCCACAACGATGCGGTAAGTATCAGATTC---AGGTTTT-----------TT------------ATT----GAT--GTTCCGCATGCGAAGTACATTACACCCGGTCTC-CCAATATGTTGCAATT--A-TGAATTCAA-AAACGTAC------------------------------------TTTGCTCGGCGTTAGTGTGTGATCAGTTTTGGGTACGACACTTCGAGAACTGTAAGTGCATGACTA----------TTT-CT-A-TGGTTTCCA-----------------------------------------------------TCTTATGTCTGCCATT--TTGCTTGTGTAAATCTTGCGCT--TTGA-------------------------------------------AT--G----------------ACACTCAATA-T----------------------TAAATAGT-TAAATAATTCGTCT-TAT-TT----------------------------------------ATTTTAGG---AAATTAACTATAGATCGGCTCCCACCGAGCGTACTCCAATCCTTCC
droSec2 scaffold_9:501419-501774 + TG--G---AACAG---------------GACGACGAGGAGCAGGTGCGCCACAACGATGCGGTAAGTATCAGATTC---AGGTTTT-----------TT------------ATT----GAT--GTTCCGCATGCGAAGTACATTACACCCGGTCTC-CCAATATGTTGCAATT--A-TGAATTAAA-AAACGTAC------------------------------------TTTGCTCGGCGTTAGTGTGTGATCAGTTTTGGGTACGACACTTGGAGAACTGTAAGTGCATGACTA----------TTT-CT-A-TGGTTTCCT-----------------------------------------------------TCTTATGTCTGCCATT--TTGCTTGTGTAAATCTTGCGCT--TTGA-------------------------------------------AT--G----------------ACACTCCATT-T----------------------TAAATAGT-TAAATAAATGGACA-TAT-TT----------------------------------------ATTTTAGG---AAATTAACTATAGATCGGTTCCCACCGAGCGTACTCCAATCCTTCC
droYak3 2R:12016440-12016796 - AG--G---AACAG---------------GATGACGAGGAGCAGGTGCGCCACAACGATGCCGTAAGTATCAGATTC---AGGCT-T-----------TT------------ATT----GAT--GTTCCGCATGCGAAGTACATTACACCCGGTCTCCCCATTATGTTGCAATT--A-TGATTTCTA-AAACTTAC------------------------------------TTTGCACGGCGTTAGTATGTGATCAATTTTGGGTACGACACTTCGAAAACTGTAAGTGCACGACTA----------TAT-GT-T-TGGCTTCCT-----------------------------------------------------TGTTATGTCTGCCAGT--TTGCTTGTGTAAATTTCGCGCTATTT-A-------------------------------------------AC--A----------------CTTCTCGATG-T----------------------TAAATGGC-TTAATAATTCGTCG-TAT-TC----------------------------------------ATTTTAGG---AAATCAACTATAGATCGGCGCCCACCGAGCGTACTCCAATCCTTCC
droEre2 scaffold_4845:11315601-11315955 + AG--G---AACAG---------------GATGACGAGGAGCAGGGGCGACACAACGATGCCGTAAGTATCAGATTC---AGGTT-T-----------TT------------ATT----GAT--GTTCCGCATGCGAAGTACATTACACCCGGTCTCCCCATTATGTTGCAAAT--T-TGATTTCTA-AAACGTAC------------------------------------TTTGCACGGCGTTAGTATGTGGTCAATTTTGGGTACGGCACTTCGAAAACTGTAAGTGCAATACTA----------TAT-GT-T-TGGCTTCC------------------------------------------------------TGTTCTGTCTGCCAGT--TTGCTTGTGTAAATTTCGCGCT--TTGC-------------------------------------------CC--G----------------CTTCTCGCTT-T----------------------TAAATGGT-TTACTAATTCGTCG-TAT-TT----------------------------------------ATTTTAGG---AAATTAACTATAGATCGGCGCCCACCGAGCGCACTCCAATCCTTTC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TG--G---ACCATGACGATGAT------GACGATGAGGAACAGGCGCGTCACACCGAAGCCGTAAGTATTTAATGTTCTCGCTTTCAGCAATT-----------------------------------------GTTG--------------------------CTTGCATTT--T-TGACTTTTT-ATTTAAATAAAATACACA---CTCATCTCAA--ATAATTTGCCGTATGC-CTGC-GCAGTTTTATGCCCAGTCCGTTTATGCCGCCCAACAAACCGTAAGTGCATGCATC----------CCACAT-T-TGTCTT-TT-----------------------------------------------------CCATGTGTC-----GT--ACGCTTCTGTGTTTGTTGCGCC--TCTTCA--G-------------CTA---AT----TCTTTATAAATCTGTAT-TATAT-----GTCCGA---------T-TCGCTTTGTGCTT-CTGCTCATA----TTGA-TTACATACATTT----T--TC----------------------------------------CCTGCAGGATCAGGTTAGCTATCGCCCAGCGCCCACCGAACGCACCCCCATCCTGTCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----TTGA-TTACATACATTT----T--TC----------------------------------------CCTGCAG..................................................2712.002000000000000000000000000000020000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................T-----------------------------------------------------CCATGTGTC-----GT--ACGCTTCT.....................................................................................................................................................................................................................................................2012.002000000200000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................C-----GT--ACGCTTCTGTGTTTGTTG...........................................................................................................................................................................................................................................2112.002000001000000000000000000001000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGCTATCGCCCAGCGCCCA......................2112.002000000100000000000000000000100000000000000000000000000000000000
...............CGATGAT------GACGATGAGGAACAGGCGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000100000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAT-TATAT-----GTCCGA---------T-TCGCT.................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGCGCCCACCGAACGCACCC..........2211.001000000000000000100000000000000000000000000000000000000000000000
...............................GATGAGGAACAGGCGCGTCAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000010000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTT----T--TC----------------------------------------CCTGCAGGATCAG............................................2111.001000000000000000000000000000000000000000000000000000000000000010
...................................................................................................................................................................................................................................................................................................................................TT-----------------------------------------------------CCATGTGTC-----GT--ACGCTTCT.....................................................................................................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
TG--G---ACCATGACGATGAT------GACGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
...............CGATGAT------GACGATGAGGAACAGGCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000001000
..................TGAT------GACGATGAGGAACAGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000010000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAGCTATCGCCCAGCGCCC.......................2111.001000000000000000000000100000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGTTGCGCC--TCTTCA--.............................................................................................................................................................................................................................1811.001000000000000000000000000001000000000000000000000000000000000000
.........................................................................TGTTCTCGCTTTCAGCAATT-----------------------------------------G..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................T-TGTCTT-TT-----------------------------------------------------CCATGTGTC-----GT--A............................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................CGCTTTCAGCAATT-----------------------------------------GTTG--------------------------CTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
..............ACGATGAT------GACGATGAGGAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000100000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCGAACGCACCCCCATCCT...2111.001000000000000000000000000000010000000000000000000000000000000000
...................GAT------GACGATGAGGAACAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000010000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................AACAAACCGTAAGTGCATGCA..................................................................................................................................................................................................................................................................................................................................................................2111.001000000000100000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTATCGCCCAGCGCCCACCGAACG...............2611.001001000000000000000000000000000000000000000000000000000000000000
.....................T------GACGATGAGGAACAGGCGCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
......................................................................................................................................................................................................................................................................TTTATGCCGCCCAACAAACCG..............................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
...............CGATGAT------GACGATGAGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1840.502000000000001010000000000000000000000000000000000000000000000000
............TGACGATGAT------GACGATGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1880.131000000000000000000000000000001000000000000000000000000000000000
droMoj3
CG--G---ACAACGACGATGATGCCGACAATGATGAGGAGCAAGCGCGTCGCAGCGAAGCTGTGAGTATACCTGGCTTTTGTGC-------------T-------------------------CTTCCAATTTCA--GC------------------------TATTGCATTT--TATGATTTCG-----------------------CTCATCTAAT--ATAATTCGA----CGCACGGC--CAGTTTTATGCACAGTCCTTTTATGCCGTACCGCAAACCGTAAGTGCATGTCTATCG-------AGT-GCTA-TGTCCT----------------------------------------------------------TTCTAATCGCTAGT-------TTTGTACGTGTGCCGCT--TCTTAACTGCTTACTGTATTTGCTGTAGAATATATATATATAAATCTGTGTATATAT-----G---------------------------------------------------------TTA---------ATTATATTATTTTGATACGCTCATTAACAATTTTATTATCCACGCAGGATCAGGTCAGCTTTCGTTCACCGGCCACTGAGCGTACGCCCATTCTGGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................................................TACCTGGCTTTTGTGC-------------T-------------------------CTTCCAATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTCGTTCACCGGCCAC.....................1811.001100000
.......................................GCAAGCGCGTCGCAGCGAAGCTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACTGAGCGTACGCCCATTCTGG.2411.001000001
....................................GGAGCAAGCGCGTCGCAGCGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTCGTTCACCGGCCACTGAGCGT..............2611.001100000
....................ATGCCGACAATGATGAGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
.......................................GCAAGCGCGTCGCAGCGAAGCTGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
...............................GATGAGGAGCAAGCGCGTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGCGTACGCCCATTCTGG.2111.001000001
....................................................................TACCTGGCTTTTGTGC-------------T-------------------------CTTCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
........................................CAAGCGCGTCGCAGCGAAGCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
droGri2
CG--G---AAAACGGTGATGAT------GATGATGAGGAACAGGCGCGCCACAGCGAAGCCGTGAGTATTTCTAC--------------------------------------T----CAT--TTACCCAATCCA---------------------------GTTTTGCATTT--T-TGATTTCTTCAACTAAATTAAACACACAATACTCATTCAAACCAAAATTTGGCGTATGCTCG--CGCAGTTTTTTAGCCATTCCGGTTATGCTGAATATCAAACCGTAAGTGCATGCATC-C--------AGC-AAAT-TGCTTTTTCCCGTGTGTTATACGCTCTCCTCTCTCTTTCTCTCTCTCTCTATTTGTGTTGTGTGGTATCCTAGACAGT--TCTCTTTTCTACAAATATTAAT--ATAT--------------------AT---------------------GT--A----T--------------ATCCATT-TAATATTGACCTAGTTACTTATA----TT---AATTGTATATTTCT-A---------------------------------------------ACTGCAGGATCAAGTCAGCTATAGACCCTTGCCCACTGAGCGCACCCCCATCCTGACSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
CA--G---AGAACAATGA---C------AATGATGAGGAGGAAGCACGTCATAATGCAAGTGTAAGTAACTTTAACTTATATTTTTAGCAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................C------AATGATGAGGAGGAAGCAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
..............ATGA---C------AATGATGAGGAGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
....G---AGAACAATGA---C------AATGATGAGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
............................AATGATGAGGAGGAAGCACGTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
dp5
AG--G---AGCAT---------------GGCGACGAGGAGCAAGTGCGCCACAACGATGCCGTAAGTATTCCCT---------TTCGGCAATTATGCTGATTCAAGCGAGAACCAATGGC-CTCCTCCGCATGTT-----CAGATAGTCCGAATTC-CCTATTTTTGGAGAAT--T-TAATTTCTT-AAGTGTATCC-----AT------------------GTTCGCGTGTTTGCTCGGCTGTAGTTGGTAGTCATGCCTGGGTATGGCATTTCGGAAACCGTAAGTGCATGATTC----------AGT-GT-T-TGCTTTCCC------------------------------------------------------------------TAA--TGGCTTCTGTAATATTTGCGCGCTTTGAC-----------------CCAC-GAA--------------------------TATCCA------C------------------------------GAATCAATCAATAATCGAATCTTTCC-TA--CT----------------------------------------CTTGCAGG---AAATCAGCTACAGATCGACACCAACGGAGCGCACACCAATCTTGGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............................................................................................................................................................................................................................................................................GCATTTCGGAAACCGTAAGTG........................................................................................................................................................................................................................................................................................................................................................................2111.0010000001000
..................................GAGGAGCAAGTGCGCCACAACGATGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCTACAGATCGACACCAACGGA..................2611.0010100000000
...............................................................AAGTATTCCCT---------TTCGGCAATT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCAACGGAGCGCACACCAA.......2111.0010100000000
...............................GACGAGGAGCAAGTGCGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGAGCGCACACCAATCTTG..2111.0010100000000
......................................................................................................................................................................................................................................................................GGTATGGCATTTCGGAAACC...............................................................................................................................................................................................................................................................................................................................................................................2011.0010010000000
droPer2
AG--G---AGCAT---------------GGCGACGAGGAGCAAGTGCGCCACAACGATGCCGTAAGTATTCCCT---------TTCGGCAATTATCCTGATTCAAGCGAGAACCAATAGC-CTCCTCCGCATGTT-----CAGATAGTCCGAATTC-CCTATTTTTGGAGATT--T-TAATTTCTT-AAGTGTATCC-----AT------------------GTTCGCGTGTTTGCTCGGCTGTAGTTGGTAGTCATGCCTGGGTATGGCATTTCGGAAACCGTAAGTGCATGATTC----------AGT-GT-T-TGCTTTCCC------------------------------------------------------------------TAA--TGGCTTCTGTAATATTTGCGCGCTTTGAC-----------------CCAC-AAA--------------------------TATCCA------C------------------------------GAATCAATCAA-AATCGAATCTTTCC-TA--CT----------------------------------------CTTGCAGG---AAATCAGCTACAGATCGACGCCAACGGAACGCACACCAATCTTGGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACAGATCGACGCCAACG....................1912.002200000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTACAGATCGACGCC........................1812.002200000
.............................GCGACGAGGAGCAAGTGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
.........................................AAGTGCGCCACAACGATGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000
droAna3
AG--G---AGCAG---------------GATGACGAGGAACAGGTGCGCCACCAAGATGCCGTAAGTATCTGTTAC---AGTTCCC-----------TA------------ATC----GCC--GTT--------GTAGCTCC-TGCATCC-GCCTCCCCATTTCTTTGCAATT--T-TAATTTCAA-AATTATCCTC-----AC--------------------------ATTTTCCCGGCCATAGTTGGTGGCCAGTACGGGGTACGGCTACTCGGAAATCGTAAGTGCAATCATA----------TCT-GT-T-TGGTTTTTG-----------------------------------------------------AGGGTTGCAGTCCAGTCTTTGCTTTTGTATAATTCGCGCT--TAAC--------------------AC---------------------GT--G----T-----------GTCCTTGTTT-T----------------------GAAAAGAA-AAACTAACTATTTC-TA--TT----------------------------------------TCTGCAGG---AGATCAGCTACAGATCACCGCCCACCGAGCGCACTCCGATCCTCTCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................TGACGAGGAACAGGTGCGCCACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.......................................ACAGGTGCGCCACCAAGATGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTACAGATCACCGCCCACCGAGCGCAC............2911.001100000
.............................................................................................................................T--------GTAGCTCC-TGCATCC-GCCTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
..............................TGACGAGGAACAGGTGCGCCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
........AGCAG---------------GATGACGAGGAACAGGTGCGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCACCGCCCACCGAGCGCACTC..........2411.001010000
..........CAG---------------GATGACGAGGAACAGGTGCGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
droBip1
AG--G---AGCAC---------------GACGACGAGGAACAGGTGCGCCACCAAGATGCGGTAAGTATCGGTTCC---AGTTC-T-----------CG------------ATC-CT-G---------GCACTCTTAGCTCCT-GCTTCC-GCGCCCCCATT-CTTTGCAATT--T-TAATCCCCA-AATTATCCTC-----GA--------------------------ATTCTCCCGGCCGTAGTGTGTGGTCAGTACGGGGCACGGCTACTCGGAAATCGTAAGTGCTATCATA----------TCT-GT-T-TGGTTTTTG-----------------------------------------------------GAGGTTGCTGTCCAGTCCCTGCTTTTGTAATATTCGCGCT--TCCAC----------------------AC------------------CT--G----------------CCCCTGGGTTTT----------------------GGAAAGAA-AATCTCACTTGTTTCTG--TT----------------------------------------CCTACAGG---AGATCAACTACCGATCACCGCCCACCGAGCGCACTCCCATCCTGGCSizeHit CountTotal NormTotal
No Reads
droKik1
AG--G---AGGATCATGG---G------GATGATGAAGAGCAAATACGACACAATGATGCTGTGAGTATGAAGGGTAGCAGTGC-T-----------C---------------CTATGGCGCTCTTTTGTAT----TA--------------------TTTTATGTTGCTGTT--G-TGATTTCTT-AACTAAACTA-----AC------------------GT-------TTTGCTCGGCCTTAGTGTGTGGTCAGTTTGGGTTACGGCTCTTCGGAAACTGTAAGTGCATGAAAT-CGTGGAATCTCTCAG-CTTGCTTTGTC-------------------------------------------------------GATTATT-----TA--TGGCTTTTGTACATTTGGCGCT--TTGATATAG-------------CTAT-AAA--------------------------TGCTTA------TT-TTTTAGG-G----------------------TAAATGAG-TAACAAAATTTT-G-TAC-TT----------------------------------------TTTGCAGG---AAATCAACTACAGATCGGCACCCACCGAACGCACTCCCATTCTGGCSizeHit CountTotal NormTotal
No Reads
droFic1
AG--G---AGCAG---------------GACGACGAGGAGCAGGTGCGCCACAACGATGCCGTAAGTATCAGTTTC---CGTTT-T-----------TA------------ATT----GAT--GTTCCGCATGCGG------------CC-GTCTTCCCATTATGCTGGGATT--T-TAATTTCTA-AGA---AA------------------------------------CTTGCTCGGCCGTAGTATGTAGTCAATTTGGGGTACGACTCTTCGGAAACCGTAAGTGCATGACTT----------TCT-GT-T-TGCTTTTTA-----------------------------------------------------CGTTGTGCTGGTCAGT--TCGCTTGTGTAAATATTGCGCT--TAGC-------------------------------------------AT--G----------------GATTTTCCCT-C----------------------AAAACGGA-ACACTTATTTGTCT-TA--CA----------------------------------------TTTTTAGG---AAATCAATTATAGATCGGTGCCCACCGAGCGCACTCCAATCCTGGCSizeHit CountTotal NormTotal
No Reads
droEle1
AG--G---AGCAG---------------GACGACGAGGAGCAGGTGCGCCACAACGATGCCGTAAGTATCAGTTGC---AATTC-T-----------TG------------ATT----GAT--GTTCCGCATGCAGCGT--------------------ATTATGTTGCAACTATA-TAATTTCTA-AAACGTAC------------------------------------ATTGCTCGGCCGTAGTGTGTGGTCAGTTTGGGGTACGACTCTTCCGAAACCGTAAGTGCATGACAG----------TCT-GT-T-TGCTTTTCA-----------------------------------------------------CGGTGTGTTGGCCACT--CCGCTTGTGTACATTTCGCGCT--TTTGC------------------------------------------CC--A----------------GTCCCCAATT-T----------------------GCAACAAA-AGACTTATTTTA---------ATTTCACTAT------------------------------TTTGTAGG---AAATCAACTATAGATCGGCGCCCACCGAGCGTACTCCAATCCTCACSizeHit CountTotal NormTotal
No Reads
droRho1
AT--GACGAACAG---------------GACGACGAAGAGCAAGTGCGCCACAACGATGCCGTAAGTATCAGTTTC---AGTTT-T-----------TG------------AAA----AAT--ATTCCGCATGCGGCGT--------------------ATTATATAGCGACT--A-TAATTTCTA-AAACGTAC------------------------------------TTTGCTTGGCCGTAGTTTGTGGTCAGTTTTGGGTACGACTCTTCGGAAACCGTAAGTGCATGACTG----------TCT-TT-T-TGCTTTTCA-----------------------------------------------------CGTTGTGTTGGCCAGT--TCGCTTGTGTAAATTTCGCGCT--TTC---------------------------------------------C--G----------------ACCCTTGACT-T----------------------CAAACGAA-AGTCTCATTTGTTT-AA--CT----------------------------------------TTTGCAGG---AAATCAACTATAGATCGGCGCCCACCGAGCGTACTCCTATCCTCACSizeHit CountTotal NormTotal
No Reads
droBia1
AG--G---AACCG---------------GATGACGAGGAGCAGGTGCGCCACAACGATGCCGTAAGTATCAGTTCC---AGTTT-C-----------TG------------ATT----GGT--GTTCCGCATGCGAAGTACATTACACTCGGTCTCCCCATTATGTTCCGCTT--T-TGATTTCAA-AAACGTAC------------------------------------TTTGCTCGGCGGTAGTTTGTGGTCAAATTGGGGTACGACTCTTCGGAAACCGTAAGTGCATGATTG----------TAT-GT-T-TGCTTGTCT-----------------------------------------------------AGTTCTGTTGGCCACT--TCGCTTGTGTAAATCTCGCGCT--TTGC-------------------------------------------TC--G----------------GCTCTCAATT-T----------------------TAAGTAGA-AGGCTCATTTGACA-CA--AT----------------------------------------TTTGCAGG---AAATCAACTATAGGCCGACGCCCACCGAACGCACACCAATTCTTCCSizeHit CountTotal NormTotal
No Reads
droTak1
AG--G---AACAG---------------GACGACGAGGAGCAGGTGCGCCACAACGATGCCGTAAGTATCAATTCC---ACTTT-T-----------CCA---C-------ATT----GAT--GTTCCGCATGCGAAGTACATTACACTCGGTCTCCCCATTATGTTGCGATT--T-TGATTTCTA-AAACGTAC------------------------------------TTTGCTCGGCGGTAGTTTGTGGTCAGTTTGGGGTACGAGTCGCCGGAAACCGTAAGTGCATGACTT------------------------TCCT-----------------------------------------------------TCTTGTGTTGGCCAGT--TCGCTTGTGTAAATTTCGCGCT--TTTC-------------------------------------------TC--G----------------TCTCTCAATT-G----------------------TAAATAGA-ATACTGATTTGTCT-CA--TG----------------------------------------CTTGCAGG---AAATCAACTACAGATCGGCGCCCACCGAGCGCACTCCAATCCTTGCSizeHit CountTotal NormTotal
No Reads
droEug1
CGATGACGAACAG---------------GATGACGAGGAGCAGGTGCGCCACAACGATGCCGTAAGTATTACTTGC---AGTTTTT-------AT--TT------------ATT----GAT--GTTCTGCGTGCGGTGTATATTACCTATGGTCTCTCCATTATGTTGCGATT--T-TGATTTCTA-AAACGTAC------------------------------------TTTGCTCGGTCGTAGTTTGTGGTCAAAATGGGGTACGACTCTTCGGAAACCGTAAGTGCATGAATA----------TAT-GT-T-TGCTTTTCT-----------------------------------------------------CGTTGTGTTGGCCAAT-ATTGCTTGTGTACATTTTGCGCT--GTTC-------------------------------------------TT--T----------------GCCCTTGGTT-T----------------------TAAATAGA-AAGCTCATGTGTTT-CT--CT----------------------------------------TTTGCAGG---AAATCAACTACAGATCGGCGCCCACCGAGCGTACTCCAATCCTTTCSizeHit CountTotal NormTotal
No Reads
dm3
TG--G---AACAG---------------GACGACGAGGAGCAGGTGCGCCATAACGATGCGGTAAGTATCAGATTC---AGATTTT-----------TC------------ATT----GAT--GTTCCGCATGCGATGTACATTACACCCGGTCTC-CCAATATGTTGCAATT--A-TGATTTCAA-AAACGTAC------------------------------------TTTGCTCGGCGTTAGTGTGTGATCAGTTTTGGGTACGAAACTTCGAGAACTGTAAGTGCATGACTA----------TTT-CC-A-TGGTTTTCT-----------------------------------------------------TGTTATGTCTGCCATT-TTTGCTTATGTAAATCTTGCGCT--TTGC-------------------------------------------AC--G----------------CCACTCCATT-T----------------------TAAATAGT-TTAAAAATTCGTCT-TATTTT----------------------------------------ATTTTAGG---AAATCAACTATAGATCTGCTCCCACCGAACGTACTCCAATCCTTCCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............G---------------GACGACGAGGAGCAGGTGCGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
........AACAG---------------GACGACGAGGAGCAGGTGCGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000100000
...........................................GTGCGCCATAACGATGCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................GAGGAGCAGGTGCGCCATAACGATGCGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........AACAG---------------GACGACGAGGAGCAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........AG---------------GACGACGAGGAGCAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTATAGATCTGCTCCCACCGAACGT..............2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....G---AACAG---------------GACGACGAGGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TGGTTTTCT-----------------------------------------------------TGTTATGTCTG....................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTCCCACCGAACGTACTCCAA.......2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............G---------------GACGACGAGGAGCAGGTGCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTGCTCCCACCGAACGTAC............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................GAGGAGCAGGTGCGCCATAACGATGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCCACCGAACGTACTCCA........2111.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................TGCGCCATAACGATGCGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....G---AACAG---------------GACGACGAGGAGCAGGTGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
............G---------------GACGACGAGGAGCAGGTGCGCCATA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
............G---------------GACGACGAGGAGCAGGTGCGCCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
............................GACGACGAGGAGCAGGTGCGCCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................AGCAGGTGCGCCATAACG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCGAACGTACTCCAATCC....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.G--G---AACAG---------------GACGACGAGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........ACAG---------------GACGACGAGGAGCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
........AACAG---------------GACGACGAGGAGCAGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
...........................................GTGCGCCATAACGATGCGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........AG---------------GACGACGAGGAGCAGGTGCGCCATAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
........AACAG---------------GACGACGAGGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............G---------------GACGACGAGGAGCAGGTGCGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.........................................AGGTGCGCCATAACGATGCGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
............................GACGACGAGGAGCAGGTGCGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................GTAC------------------------------------TTTGCTCGGCGTTAGTG.................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..........CAG---------------GACGACGAGGAGCAGGTGCGCCATAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TG--G---AACAG---------------GACGACGAGGAGCAGGTGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
TG--G---AACAG---------------GACGACGAGGAGCATC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TG--G---AACAG---------------GACGACGAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.......................................GCAGGTGCGCCATAACGATGCGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................TTTGCTCGGCGTTAGTGTGTG.............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................TGCGATGTACATTACACGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-T----------------------TAAATAGT-TTAAAAA...............................................................................................................1740.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TG--G---AACAG---------------GACGACGAGGAGCAAGTGCGCCACAACGATGCGGTAAGTATCAGATTC---AGGTTTT-----------TT------------ATT----GAT--GTTCCGCATGCGAAGTACATTACACCCGGTCTC-CCAATATGTTGCAATT--A-TGAATTCAA-AAACGTAC------------------------------------TTTGCTCGGCGTTAGTGTGTGATCAGTTTTGGGTACGACACTTCGAGAACTGTAAGTGCATGACTA----------TTT-CT-A-TGGTTTCCA-----------------------------------------------------TCTTATGTCTGCCATT--TTGCTTGTGTAAATCTTGCGCT--TTGA-------------------------------------------AT--G----------------ACACTCAATA-T----------------------TAAATAGT-TAAATAATTCGTCT-TAT-TT----------------------------------------ATTTTAGG---AAATTAACTATAGATCGGCTCCCACCGAGCGTACTCCAATCCTTCCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................................................................AATTCAA-AAACGTAC------------------------------------TTTGCTCGGCG.......................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110000000000000000
..............................................................................................................................................................................................................................................................................ACTTCGAGAACTGTAAGTGCA......................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
....G---AACAG---------------GACGACGAGGAGCAAGTGCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000000010000
TG--G---AACAG---------------GACGACGAGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000000001000
...............................GACGAGGAGCAAGTGCGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000001000000
droSec2
TG--G---AACAG---------------GACGACGAGGAGCAGGTGCGCCACAACGATGCGGTAAGTATCAGATTC---AGGTTTT-----------TT------------ATT----GAT--GTTCCGCATGCGAAGTACATTACACCCGGTCTC-CCAATATGTTGCAATT--A-TGAATTAAA-AAACGTAC------------------------------------TTTGCTCGGCGTTAGTGTGTGATCAGTTTTGGGTACGACACTTGGAGAACTGTAAGTGCATGACTA----------TTT-CT-A-TGGTTTCCT-----------------------------------------------------TCTTATGTCTGCCATT--TTGCTTGTGTAAATCTTGCGCT--TTGA-------------------------------------------AT--G----------------ACACTCCATT-T----------------------TAAATAGT-TAAATAAATGGACA-TAT-TT----------------------------------------ATTTTAGG---AAATTAACTATAGATCGGTTCCCACCGAGCGTACTCCAATCCTTCCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTCCCACCGAGCGTACTCC.........2111.0010010
........................................CAGGTGCGCCACAACGATGCGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
...................................AGGAGCAGGTGCGCCACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
droYak3
AG--G---AACAG---------------GATGACGAGGAGCAGGTGCGCCACAACGATGCCGTAAGTATCAGATTC---AGGCT-T-----------TT------------ATT----GAT--GTTCCGCATGCGAAGTACATTACACCCGGTCTCCCCATTATGTTGCAATT--A-TGATTTCTA-AAACTTAC------------------------------------TTTGCACGGCGTTAGTATGTGATCAATTTTGGGTACGACACTTCGAAAACTGTAAGTGCACGACTA----------TAT-GT-T-TGGCTTCCT-----------------------------------------------------TGTTATGTCTGCCAGT--TTGCTTGTGTAAATTTCGCGCTATTT-A-------------------------------------------AC--A----------------CTTCTCGATG-T----------------------TAAATGGC-TTAATAATTCGTCG-TAT-TC----------------------------------------ATTTTAGG---AAATCAACTATAGATCGGCGCCCACCGAGCGTACTCCAATCCTTCCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATCGGCGCCCACCGAGCGTACTCC.........26110.0010000000000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGCCCACCGAGCGTACTCCAATCC....2611.00101000000000
..............................TGACGAGGAGCAGGTGCGCCACAACGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
.G--G---AACAG---------------GATGACGAGGAGCAGGTGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
...........AG---------------GATGACGAGGAGCAGGTGCGCCAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCAACTATAGATCGGCGC.........................2011.00100100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGCGCCCACCGAGCGTACTCCAATCC....2811.00101000000000
.............................ATGACGAGGAGCAGGTGCGCCACAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAATTCGTCG-TAT-TC----------------------------------------ATTTTAGA---..............................................2511.00101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC--A----------------CTTCTCGATG-T----------------------TAAATGGC-......................................................................................................................2211.00100100000000
..................................................................................................................................................................................................................................................................TTTGGGTACGACACTTCGA....................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
............................................................................................................................................................................................................................................................ATCAATTTTGGGTACGACACT........................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
droEre2
AG--G---AACAG---------------GATGACGAGGAGCAGGGGCGACACAACGATGCCGTAAGTATCAGATTC---AGGTT-T-----------TT------------ATT----GAT--GTTCCGCATGCGAAGTACATTACACCCGGTCTCCCCATTATGTTGCAAAT--T-TGATTTCTA-AAACGTAC------------------------------------TTTGCACGGCGTTAGTATGTGGTCAATTTTGGGTACGGCACTTCGAAAACTGTAAGTGCAATACTA----------TAT-GT-T-TGGCTTCC------------------------------------------------------TGTTCTGTCTGCCAGT--TTGCTTGTGTAAATTTCGCGCT--TTGC-------------------------------------------CC--G----------------CTTCTCGCTT-T----------------------TAAATGGT-TTACTAATTCGTCG-TAT-TT----------------------------------------ATTTTAGG---AAATTAACTATAGATCGGCGCCCACCGAGCGCACTCCAATCCTTTCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............................GACGAGGAGCAGGGGCGACACAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAGATCGGCGCCCACCGAGCGCAC............2611.0011000000
..........CAG---------------GATGACGAGGAGCAGGGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACTATAGATCGGCGCCCACCG...................2311.0011000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAGATCGGCGCCCACCGAGCGCA.............2511.0011000000
.......................................................................................................................................................................................................................................TTTGCACGGCGTTAGTATGTGGTCA.........................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGATCGGCGCCCACCGAGCGCACTCC.........2711.0011000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGATCGGCGCCCACCGAGCGCAC............2411.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCACCGAGCGCACTCCA........1911.0010000100

Generated: 05/17/2015 at 03:29 AM