ID:

dvi_6840

 Coordinate:

scaffold_12875:14264346-14264496 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [Dvir\GJ22087-cds]; exon [dvir_GLEANR_7399:2]; intron [Dvir\GJ22087-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CCTTCAGCAGAGCCCGGCGCCCACCAAGCCGAGCCGACAGAAGGCGTCGCGTAAGTTCAAATAACAATTACTGCAGCTGCTGTTGCACTACAGCTGCCTGCCGCAACTGGCGACCAGGACAGCGAAGACGCCGGCGCTGCTCCGACTGACCCTGCAACTGGATAGCGACAACGAATCCGAATTCGTGCCGGAGCCGGTGCACGTCTAAGCCCAAGTACAAGTACAGTAAAACCTACAAAATGCTGTAAAAA
*****************************************************************************************.((((.(((.(((((..((((...))))....))).....)).)))))))...........***************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060664
9_males_carcasses_total
 SRR060667
160_females_carcasses_total
 SRR060679
140x9_testes_total
 M061
embryo
 SRR060668
160x9_males_carcasses_total
 SRR060671
9x160_males_carcasses_total
 SRR060672
9x160_females_carcasses_total
 SRR1106729
mixed whole adult body
 V047
embryo
 SRR060685
9xArg_0-2h_embryos_total
 SRR060666
160_males_carcasses_total
 SRR060682
9x140_0-2h_embryos_total
 V053
head
............................................................................................................................AAGACGCCGGCGCTGCTCCGACTGAC..................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........GAGCCCGGCGCCCACCAAGC.............................................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................CGGCGCTGCTCCGACTGACCCTGCAACT............................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................AATTCGTGCCGGAGCCGGTGCACGTC.............................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................ACAGCTGCCTGCCGCAACTGGCGACC........................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................CCGGCGCTGCTCCGACTGACC.................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................TTACTGCAGCTGCTGTTGCA.................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................TAGCGACAACGAATCCGAATT.................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................ACTGCAGCTGCTGTTGCCCTACCGC............................................................................................................................................................. 25 2 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
......................................................................................................................................................................................................................GTACAAGTACAGTAAAACC.................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................AAGACGCCGGCGCTGCTCCGACT........................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................GCTCCGACTGACCCTGCAACTGGATAGC..................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................GAAGGCGTCGCGTAAGTTCGAA.............................................................................................................................................................................................. 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................GACCAGGACAGCGAAGAC.......................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................CTGTTGCACTACAGCTGCCTGCCGC................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................AGCGACAACGAATCCGAATTCGTGCC.............................................................. 26 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................................CAAGTACAAGTACAGTAAAACCTACA.............. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................GTACAAGTACAGTAAAACCTA................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................AGTACAGTAAAACCGACAAAATGCCGT..... 27 2 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................AACTGGCGACCAGGACAGC................................................................................................................................ 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................AAGTACAAGTACAGTAAAACCTACA.............. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................TGCAACTGGATAGCGACAAC............................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................AAGCCCAAGTACAAGTACAGTAAAACC.................. 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................GACGCCGGCGCTGCTCCGACT........................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................ATAACAATTACTGCAGCTGCTGTT....................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................CAACTGGATAGCGACAACG.............................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................TGCAACTGGATAGCGACAACGAATCCG........................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................GCAACTGGATAGCGACAACG.............................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................GTACAAGTACAGTAAAACCTACA.............. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................ACTGGATAGCGACAACGAA............................................................................ 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................TGCAACTGGATAGCGACAACGA............................................................................. 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................CAAGTACAGTAAAACCTACA.............. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................TGCAACTGGATAGCGACAACGAATCCGA....................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CAAGTACAAGTACAGTAAAACC.................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CAAGTACAAGTACAGTAAAACCTA................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................GACTGACCCTGCAACTGGAT........................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................AGCGAAGACGCCGGCGCTGCTCCGCCT........................................................................................................ 27 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................TAGCGAAAGCGAGTCCGAAT..................................................................... 20 3 12 0.33 4 0 0 0 0 0 0 0 0 0 0 2 1 1 0
........................................................................................................................................................................................GTGGCGGAGCCGGTGCGCGTT.............................................. 21 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................CTGAACGGACAGAAGGCGT............................................................................................................................................................................................................ 19 3 15 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1
..................................................................................................................................................................TAGCGAAATCGAGTCCGAA...................................................................... 19 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

GGAAGTCGTCTCGGGCCGCGGGTGGTTCGGCTCGGCTGTCTTCCGCAGCGCATTCAAGTTTATTGTTAATGACGTCGACGACAACGTGATGTCGACGGACGGCGTTGACCGCTGGTCCTGTCGCTTCTGCGGCCGCGACGAGGCTGACTGGGACGTTGACCTATCGCTGTTGCTTAGGCTTAAGCACGGCCTCGGCCACGTGCAGATTCGGGTTCATGTTCATGTCATTTTGGATGTTTTACGACATTTTT
*****************************************************************************************************.((((.(((.(((((..((((...))))....))).....)).)))))))...........***************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M027
male body		 GSM1528803
follicle cells		 V047
embryo
 M047
female body
 V053
head
 SRR060684
140x9_0-2h_embryos_total
..........................................................................................................................................................................TGGTGAGTCTTAAGCACGGC............................................................. 20 3 5 0.20 1 1 0 0 0 0 0
..........................................................................................................................................................................TGGTTAGGCTTAAGCAAG............................................................... 18 2 9 0.11 1 0 1 0 0 0 0
.................................................................TTAATGTCGTCGACGACAA....................................................................................................................................................................... 19 1 9 0.11 1 0 0 1 0 0 0
.........................................................................................................................................................................TCGCTAAGGCTGAAGCACG............................................................... 19 3 20 0.10 2 1 0 0 0 0 1
..................................................................TAATGTCGTCGACGACAA....................................................................................................................................................................... 18 1 10 0.10 1 0 0 0 1 0 0
..........................................................................................................................................................................TGCTGAGGCCTAAGCATG............................................................... 18 3 18 0.06 1 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12875:14264296-14264546 + dvi_6840 CCT----------------------TCAG------------C----AGAGCCCG----------GCG-------------CCCACCAAGCCGAGCCGACAGAAGGCGTCGCGTAAGTTCAAATAACAATTACTGCAGCTGCTGTTGCACTACAGCTGCCTGCCGCAACTGGCGACCAGGACAGCGAAGA---CGCCGGCGCTGC---TCCGAC--------------------------------------------------------TGACCCTGCAACTGGATAGCGACAACGAATCCGAATT-CGTGCCGG---AGCCGGTGCACGTCTAAGCCCA---AGTAC------AAGT-ACAGT-----------------------------------AAAACCTACA---------------------------------AAATGCTGTAAAAA---------
droMoj3 scaffold_6496:9711884-9712150 + CCT----------------------GCAG------------C----AGAATGCG----------GCA-------------CCCACCAAGCCGAGCAGGCAGAAGGCGTCGCGTAAGTTTAAATAACAATTACTGCAACTGCTGATGCACTACAGCTGCCTGCCGCAACTGGCGACGAGGACAG---------------CGCTGC---TCCGAT----------------------------------TCAC----CCTGCGA------CTGGATGGCGA------------CAACGAATCTGAACATCT-GCCGG---AGCCGGTGCATGTCTAGGCCCAGCAAG--TAC----AACT-ACAGTAGAGCCCTAATCATA------------------------------------------ACAAAAGTAAAACGACA-AGAAAATGCTGTACAAA---------
droGri2 scaffold_15245:14236202-14236475 + CCT----------------------GCAA------------C----CGAATGCC----------ACG-------------CCCACAAAGCCGAGCCGCCAGAAGGCGTCGCGTAAATTTAAATAACAATTACTGCAGCTGCTGTTGCACTACAGCTGCCTGCCGCAACTGGCGACCAGGTCAGCAAAGATGAGGCCAACCCTGC---TCCGAC----------------------------------TGAC----CCTGCAA------CTGG------ACAACG-------------------AATCCGAGCCGG---AACCCGTGCATGTCTAAGCCTA---AGTACAAATCCAACT-ACAA--CAATACCAACACAA---TTTAATACTAA----GAAAAAAGTACAA---------------------------------AATGCTGTAAAAA---------
droWil2 scf2_1100000004514:124476-124698 - C----------------------------------AT---------------------------C-----C---------ACCTCCAAGGCAAACCGTCAACGAACGCTGCGTAAGTTTAAATAGCAATTACTTAAACTGCTCCTGCACTACAGCTGTCTGCCGCATCTGGCCAA-------------------------------------GATGTCCAATCATCGGCTGAAATTGCTGGAGCAAGAGAC--------------------------------------------------------ATTACCGG---AGGCAGTTCATGTCTAAGGAA----AA--CAAAGCAAACA-AAAA--AAGGGCCAACC--------------------CAAAGAAAGTACAAA-----AC----------------------------GCAACGAGAA---------
dp5 3:3568266-3568560 + CCCAGACAGCAGAGACGTCGAGCCAGCAGCACATCACCATGCAGC-AGCAGCCGGGAAACAGTGG-----CAGCTCCAGT---AACAAGGCCAGCCGCCAGCGGGCGGTGCGTAAGTTTAAATAGCAATTACTGAACCTGCTGATGCACTACAGCTGCCTGCCACACCTGGCGTGTC-------------------------GG---CCCA----------------------------------------------GGCGG------TTGCAACTGCATTTGG-------------------ATCCCGAGCCCC---AACCCGTGCACGTCTAAGCA--GGAAA--CAGAGC----TGAAAA--GAGGGCCCACCCCA------------------------------------------ACGAACAGGAACGGATA-ACTAAATGGAA------TTACATCGA
droPer2 scaffold_2:3756993-3757253 + C----------------------------------ACCATGCAGC-AGCAGCCGGGCAACAGTGG-----CAGCTCCAGT---AACAAGGCCAGCCGCCAGCGGGCGGTGCGTAAGTTTAAATAGCAATTACTGAACCTGCTGATGCACTACAGCTGCCTGCCACACCTGGCGTGTC-------------------------GG---CCCA----------------------------------------------GGCGG------TTGCAACTGCATTTGG-------------------ATCCCGAGCCCC---AACCCGTGCACGTCTAAGCA--GGAAA--CAGAGC----TGAAAA--GAGGGCCCACCCCA------------------------------------------ACGAAAAGGAACGGATA-ACTAAATGGAA------TTGAATCGA
droAna3 scaffold_13266:4876874-4877009 + C----------------------------------ACATTGCCAGCTGGAAAC-CGAAACGGAAG--CGGAAGCTCAAACGTCTCCAAGAACGGCAAACAGAGAGCCGGCCGCAAGCTCAAATAGCAATTACTGAACCTGCTGATGCACTACAGCTGCCTGCCACACCTGGCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000395751:675409-675544 + C----------------------------------ACATTGCCAGCTGGAAAC-CGAAGCGGAAG--CGGAAGCTCAAACGTCTCCAAGAACGGCAAACAGAGAGCCGGCCGCAAGCTGAAATAGCAATTACTGAACCTGCTGATGCACTACAGCTGCCTGCCACACCTGGCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302682:168444-168710 - ATG----------------------GCAG---------------------------------CAG-----C---------GTCTCCAAGAACGGCAAACAGAAGTCCGCCCGCAAGCTCAAATAGCAATTACTGAACCTGCTGATGCACTACAGCTGCCTGCCGCACCTGGCGTGTG-------------------------GC---TCCAAA---------TGGCGTCCCAAATAC-------------CTATACCGACAG------CTGGAACCCAAATTGG-------------------AGAGCGAGCCCC---AACCTGTCCACGTGTAACAA----------------------------AACCC-------GGAGATTGACAAG-GAATAAGCGAGAGTACAAAAAAACGCATA-------TGCAACGAAACGGAGAATGCTGTAAT---T-----AA
droFic1 scf7180000453811:182200-182403 - C----------------------------------AGGTTGCCGGCAGGAAGC-GGAAGTGGCGG-----C---------GTCTCGAAGAACGGCAAACAGAGGTCCGCCCGCAAGTTCAAATAGCAATTACTGCAGCTGCTGATGCACTACAGCTGCCTGCCACACCTGGCATTCG-------------------------GT---TGCAAG----------------------------------TCGCATTACCGGCAG------CTGGCAACCAATCTGG-------------------ACCATGAACCCCCTGAACCCGTGCACGTCTAAACCC----------------------------------------A-------------------------------------------------------------------------------------
droEle1 scf7180000491232:287948-288207 - C----------------------------------ACGTTGCCGGCAGGAAGT-GGAAACGGAGG-----C---------GTCTCCAAGAACAGCAAACAGCGGTCCGCCCGCAAGTTCAAATAGCAATTACTGAAGCTGCTGATGCACTACAGCTGCCTGCCACACCTGGCGTGTC-------------------------GC---TCCAAG----------------------------------TTGTATTACCGGCGG------CTGGAACCGAATCTGG-------------------ATACCGAACCCC---AACCCGTGCACGTCTAAACCC---------------------------------------GGCGATTAATTGACAAATCCAAGAAAGTACAAA-----GCGTA--------GCAACGAT-----GAATGCTGTAGAAG---------
droRho1 scf7180000780219:66346-66595 + C--------------------------------------TGCCGGCTGGAAGC-GGAA------A-----C---------GTCTCCAAGAACAGCAAACAGAGGTCCGCCCGCAAGTTCAAATAGCAATTAATGAAGCTGCTGATGCACTACAGCTGCCTGCCACACCTGGCGTGTC-------------------------GC---CCCAAG----------------------------------TCGCATTACCGGCGG------CTGGAACCGAATGTGG-------------------ATACCGAACCCC---AACCCGTGCACGTCTAACCC----------------------------------------GGCGATTGATTGACAAATCCAAGAAAGTACAAA-----GCGTA-------TGCAACGAC-----GAATGCTGTAAAAA---------
droBia1 scf7180000302143:1326017-1326283 - ACA----------------------GCAGCACATCACATTGCCGGCCGGAAGC-GGAAACAACAG--CGGC---------GTCTCCAAGAACGGCAAACAAAGGTCGGGCCGCAAGTTCAAATAGCAATTACTGAACCTGCTGATGCACTACAGCTGCCTGCCACACCTGGCGTGTG-------------------------GC---TGCAGGTCG-------------------------------TCGCACTACCGGCGGATGCAGCTGGATCCCCCTCTGG-------------------AGACCGAACCCC---AACCCGTGCACGTCTAGCCC----------------------------------------GACGATTGATAGACAGATCCAAGAAAGTACAA----------------------------------ATGCTGTATAAA---------
droTak1 scf7180000410787:53902-54092 - GCA----------------------GCAG---------------------------------CAA-----C---------GTCTCCAAGAACAACAAACAGAAGTCCGCCCGCAAGTTCAAATAGCAATTATTGAACCTGCTGATGCACTACAGCTGCCTGCCACACCTGGCGTGTG-------------------------GCAGCTGCAGGTCG-------------------------------CTGTACTACCGGCGGCTGCCACTGGAACCCCATCTGG-------------------ATACCGAACCCC---AACCCGTGCACGTCTAACCC-------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409474:848152-848411 - C----------------------------------ACGATGCCGACTGGAAGC-GGAAACGGCAA-----C---------GTCTCCAAGAACGGCAAGCAGAGGTCCTCCCGCAAGTTCAAATAGCAATTACTGAACCTGCTGATGCACTACAGCTGCCTGCCACACCTGGCGTGTC-------------------------GC---TGTAAG----------------------------------TCGCAATATCGGCGG------CTGGAACCGAATCTGG-------------------ATACCGAACCCC---AACCCGTACACGTCTAACGC----------------------------------------GGCGATTGATAGACAGATCCACGAAAGTACAAA-----GCGAA-------TGCAACGAA-----TTATGCTGTAAAAA---------
dm3 chr2R:17098042-17098250 + G-------------------------------------------------------------CAG-----C---------GTCTCCAAGAGCGGCAAACAGAGGTCCGCACGCAAGTTCAAATAGCAATTACTGAAGCTGCTGATGCACTACAGCTGCCTGCCACACCTGGCGTGCC-------------------------GC---TGCAAG----------------------------------TCGCAGTATCGGCGG------CTGGAACCCAATCTGG-------------------ATACCGAACCCC---AACCCGTCCACGTCTAAACCC---------------------------------------GACGATTGATAGACAGATCCGAGGAAGTACAAA-----GC-----------------------------------------------
droSim2 2r:17652912-17653084 + G-------------------------------------------------------------CAG-----C---------GTCTCCAAGAGCGGCAAACAGAGGTCCGCCCGCAAGTTCAAATAGCAATTACTGAAGCTGCTGATGCACTACAGCTGCCTGCCACACCTGGCGTGCC-------------------------GC---TGCAAG----------------------------------TCGCAGTACCGGCGG------CTGGAACCCAATCTGG-------------------ATACCGAACCCC---AACCCGTCCACGTCTAACCC-------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_9:424214-424386 + G-------------------------------------------------------------CAG-----C---------GTCTCCAAGAGCGGCAAACAGAGGTCCGCCCGCAAGTTCAAATAGCAATTACTGCAGCTGCTGATGCACTACAGCTGCCTGCCACACCTGGCGTGCC-------------------------GC---TGCAAG----------------------------------TCGCAGTACCGGCGG------CTGGAACCCAATCTGG-------------------ATACCGAACCCC---AACCCGTCCACGTCTAACCC-------------------------------------------------------------------------------------------------------------------------------
droYak3 2R:12098075-12098334 - C----------------------------------AGGATGCAGCCAGGCGGC-GGAAATGGCAG-----C---------GTCTCCAAGAGCGGCAAACAGAGGTCCGCCCGCAAGTTCAAATAGCAATTACTGAAGCTGCTGATGCACTACAGCTGCCTGCCACACCTGGCGTGCC-------------------------GC---TGCAAG----------------------------------TCGCAGTACCGGCGG------CTGGAACCCAATCTGG-------------------ATACCGAACCCC---AACCCGTACACGTCTAACCC----------------------------------------GACGATTGATAGACAGATCCGAGGACGTACAAA-----GCGTA-------TGCCACGTT-----AAATGCTGTACAAA---------
droEre2 scaffold_4845:11240574-11240835 + C----------------------------------AGGATGCAGCCAGGCGGA-GGAAATGACGG-----C---------GTATCCAAGGGCGGCAAACAGCGGTCCGCCCGCAAGTTCAAATAGCAATTACTGAAGCTGCTGATGCACTACAGCTGCCTGCCACACCTGGCGTGCC-------------------------GC---TGCAAG----------------------------------TCGCAGTACCGGCGG------CTGGAACCCAATCTGG-------------------ATACCGAACCCC---AACCCGTCCACGTCTAACCC----------------------------------------GACGATTGATAGACAGATCCGAGAAAGTACAAA-----GCGTA-------GGCCACGAT-----AAATGCTGTACAAATT-------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
CCT----------------------TCAG------------C----AGAGCCCG----------GCG-------------CCCACCAAGCCGAGCCGACAGAAGGCGTCGCGTAAGTTCAAATAACAATTACTGCAGCTGCTGTTGCACTACAGCTGCCTGCCGCAACTGGCGACCAGGACAGCGAAGA---CGCCGGCGCTGC---TCCGAC--------------------------------------------------------TGACCCTGCAACTGGATAGCGACAACGAATCCGAATT-CGTGCCGG---AGCCGGTGCACGTCTAAGCCCA---AGTAC------AAGT-ACAGT-----------------------------------AAAACCTACA---------------------------------AAATGCTGTAAAAA---------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................................................................................................................................................................................AAGA---CGCCGGCGCTGC---TCCGAC--------------------------------------------------------TGAC................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
...............................................GAGCCCG----------GCG-------------CCCACCAAGC.......................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000100000000000000000000000000000000000000000000
...................................................................................................................................................................................................CGGCGCTGC---TCCGAC--------------------------------------------------------TGACCCTGCAACT.......................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................AATT-CGTGCCGG---AGCCGGTGCACGTC.....................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................ACAGCTGCCTGCCGCAACTGGCGACC.................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................CCGGCGCTGC---TCCGAC--------------------------------------------------------TGACC...............................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................TTACTGCAGCTGCTGTTGCA.............................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................TAGCGACAACGAATCCGAATT-..............................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................GTAC------AAGT-ACAGT-----------------------------------AAAACC............................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................AAGA---CGCCGGCGCTGC---TCCGAC--------------------------------------------------------T...................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................GC---TCCGAC--------------------------------------------------------TGACCCTGCAACTGGATAGC................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................GACCAGGACAGCGAAGA---C................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................CTGTTGCACTACAGCTGCCTGCCGC............................................................................................................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................AGCGACAACGAATCCGAATT-CGTGCC........................................................................................................................................................2611.001000000000000000000000010000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................CA---AGTAC------AAGT-ACAGT-----------------------------------AAAACCTACA---------------------------------.......................2611.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................GTAC------AAGT-ACAGT-----------------------------------AAAACCTA..........................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................AACTGGCGACCAGGACAGC.........................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................A---AGTAC------AAGT-ACAGT-----------------------------------AAAACCTACA---------------------------------.......................2511.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TGCAACTGGATAGCGACAAC..........................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................AAGCCCA---AGTAC------AAGT-ACAGT-----------------------------------AAAACC............................................................2711.001000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................................................................GA---CGCCGGCGCTGC---TCCGAC--------------------------------------------------------T...................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................ATAACAATTACTGCAGCTGCTGTT................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................CAACTGGATAGCGACAACG.........................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TGCAACTGGATAGCGACAACGAATCCG...................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................GCAACTGGATAGCGACAACG.........................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................GTAC------AAGT-ACAGT-----------------------------------AAAACCTACA---------------------------------.......................2311.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................ACTGGATAGCGACAACGAA.......................................................................................................................................................................1911.001000000000000001000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TGCAACTGGATAGCGACAACGA........................................................................................................................................................................2211.001000000000000001000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................C------AAGT-ACAGT-----------------------------------AAAACCTACA---------------------------------.......................2011.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TGCAACTGGATAGCGACAACGAATCCGA..................................................................................................................................................................2811.001000000000000001000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................CA---AGTAC------AAGT-ACAGT-----------------------------------AAAACC............................................................2211.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................CA---AGTAC------AAGT-ACAGT-----------------------------------AAAACCTA..........................................................2411.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................GAC--------------------------------------------------------TGACCCTGCAACTGGAT...................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
CCT----------------------GCAG------------C----AGAATGCG----------GCA-------------CCCACCAAGCCGAGCAGGCAGAAGGCGTCGCGTAAGTTTAAATAACAATTACTGCAACTGCTGATGCACTACAGCTGCCTGCCGCAACTGGCGACGAGGACAG---------------CGCTGC---TCCGAT----------------------------------TCAC----CCTGCGA------CTGGATGGCGA------------CAACGAATCTGAACATCT-GCCGG---AGCCGGTGCATGTCTAGGCCCAGCAAG--TAC----AACT-ACAGTAGAGCCCTAATCATA------------------------------------------ACAAAAGTAAAACGACA-AGAAAATGCTGTACAAA---------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................................................................................................................................................................................................................................GCGA------CTGGATGGCGA------------CAACG.........................................................................................................................................................................2014.004000004
.......................................................................................................................................................................................................................................................................................................................................................................ACAGTAGAGCCCTAATCATA------------------------------------------ACA.........................................2312.002001001
.......................................................................................................................................................CAGCTGCCTGCCGCAACT........................................................................................................................................................................................................................................................................................................1811.001100000
.....................................................................................................................................................................AACTGGCGACGAGGACAG---------------C..........................................................................................................................................................................................................................................................................1911.001000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................AGTAAAACGACA-AGAAAATGCTGTACA...........2711.001100000
..............................................................................................................................................................................................................................................................................GGATGGCGA------------CAACGAATCT....................................................................................................................................................................1911.001100000
...............................................................................................................................................................................................................................................................................................................................GCCGGTGCATGTCTAGGCCCA.............................................................................................................................2111.001100000
................................................................................................................................................................................AGGACAG---------------CGCTGC---TCCGAT----------------------------------TCAC----CCT...............................................................................................................................................................................................................2611.001100000
................................................................................................................................................................................................................................................................................................................CATCT-GCCGG---AGCCGGTGCA.........................................................................................................................................2011.001000100
....................................................................................................................................................................................................................................................................................................................T-GCCGG---AGCCGGTGCATGTCTAGGCC...............................................................................................................................2611.001000100
.................................................................................................................................................................................................................................................................................TGGCGA------------CAACGAATCTGAACA...............................................................................................................................................................2111.001100000
.................................................................................................................................................................................................................................................................................................................ATCT-GCCGG---AGCCGGTGCA.........................................................................................................................................1911.001100000
................................................................................................................................................................................................................................................................CTGCGA------CTGGATGGCGA------------CA............................................................................................................................................................................1911.001100000
...........................................................................................................................................................................................................................................................................................................CTGAACATCT-GCCGG---AGCCGGTGC..........................................................................................................................................2411.001100000
...............................................................................................................................................................................................................TCCGAT----------------------------------TCAC----CCTGCGA------CTGGATGG.............................................................................................................................................................................................2511.001000010
....................................................................................................................................................................................................................................................................................................................T-GCCGG---AGCCGGTGCATGTCTAGGCCC..............................................................................................................................2711.001100000
.....................................................................................................................................................................AACTGGCGACGAGGACAG---------------CGCTGC---TCC...............................................................................................................................................................................................................................................................2711.001000001
.......................................................................................................................................................................................................................................................................................................................................................AG--TAC----AACT-ACAGTAGAGCCCT.............................................................................................2211.001100000
...................................................................................................AGAAGGCGTCGCGTAAGTTTAAATA.....................................................................................................................................................................................................................................................................................................................................................2511.001100000
...............................................................................................................................ATTACTGCAACTGCTGATGCACT...........................................................................................................................................................................................................................................................................................................................2311.001100000
.....................................................................................................................................................TACAGCTGCCTGCCGCAACTGGCGACG.................................................................................................................................................................................................................................................................................................2711.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................TA------------------------------------------ACAAAAGTAAAACGACA-..........................1911.001100000
....................................................................................................GAAGGCGTCGCGTAAGTTTAAATA.....................................................................................................................................................................................................................................................................................................................................................2411.001000001
................................................................................................................................................................................................................................................................CTGCGA------CTGGATGGCGA------------CAAC..........................................................................................................................................................................2111.001100000
.................................................................................................................................................................................................................................................................TGCGA------CTGGATGGCGA------------CAACGA........................................................................................................................................................................2211.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................GACA-AGAAAATGCTGTACA...........1911.001100000
..........................................................................................................GTCGCGTAAGTTTAAATAACA..................................................................................................................................................................................................................................................................................................................................................2111.001000001
.................................................................................................................................TACTGCAACTGCTGATGCA.............................................................................................................................................................................................................................................................................................................................1911.001100000
.....................................................................................................................................................................................................................................................................A------CTGGATGGCGA------------CAACGAATCTG...................................................................................................................................................................2311.001100000
...........................AG------------C----AGAATGCG----------GCA-------------CCCACCA..........................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
................................................................................................GGCAGAAGGCGTCGCGTAAGTTTAAATA.....................................................................................................................................................................................................................................................................................................................................................2811.001000001
....................................................................................................................................................................................................................................................................................................................T-GCCGG---AGCCGGTGCATGTCT....................................................................................................................................2111.001100000
.........................................................................................................................................................................GGCGACGAGGACAG---------------CGCTGC---TCCGA.............................................................................................................................................................................................................................................................2511.001000001
..........................................................................................................................................................................................................................................................................................................TCTGAACATCT-GCCGG---AGC................................................................................................................................................1911.001100000
.....................................................................................................................................................TACAGCTGCCTGCCGCAACTGGC.....................................................................................................................................................................................................................................................................................................2311.001100000
....................................................................................................................................................................................................................................................................................................................................................GCAAG--TAC----AACT-ACAGTAGAGCCC..............................................................................................2411.001000001
............................................................................................................................................................................................................................................................................................................TGAACATCT-GCCGG---AGCCGGTGCAT........................................................................................................................................2511.001100000
.......................................................................................................................................................................................................................................................................................................................................................................ACAGTAGAGCCCTAATCATA------------------------------------------AC..........................................2211.001100000
.........................................................................................CCGAGCAGGCAGAAGGCGTCGCGTA...............................................................................................................................................................................................................................................................................................................................................................2511.001100000
.....................................................................................CAAGCCGAGCAGGCAGAAGGCGTCGC..................................................................................................................................................................................................................................................................................................................................................................2611.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAACGACA-AGAAAATGCTGTACA...........2611.001100000
.................................................................................................................................................................................................................................................................TGCGA------CTGGATGGCGA------------CAACG.........................................................................................................................................................................2111.001001000
................................................................................................................................................................................AGGACAG---------------CGCTGC---TCCGAT----------------------------------..........................................................................................................................................................................................................................1911.001100000
droGri2
CCT----------------------GCAA------------C----CGAATGCC----------ACG-------------CCCACAAAGCCGAGCCGCCAGAAGGCGTCGCGTAAATTTAAATAACAATTACTGCAGCTGCTGTTGCACTACAGCTGCCTGCCGCAACTGGCGACCAGGTCAGCAAAGATGAGGCCAACCCTGC---TCCGAC----------------------------------TGAC----CCTGCAA------CTGG------ACAACG-------------------AATCCGAGCCGG---AACCCGTGCATGTCTAAGCCTA---AGTACAAATCCAACT-ACAA--CAATACCAACACAA---TTTAATACTAA----GAAAAAAGTACAA---------------------------------AATGCTGTAAAAA---------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
C----------------------------------AT---------------------------C-----C---------ACCTCCAAGGCAAACCGTCAACGAACGCTGCGTAAGTTTAAATAGCAATTACTTAAACTGCTCCTGCACTACAGCTGTCTGCCGCATCTGGCCAA-------------------------------------GATGTCCAATCATCGGCTGAAATTGCTGGAGCAAGAGAC--------------------------------------------------------ATTACCGG---AGGCAGTTCATGTCTAAGGAA----AA--CAAAGCAAACA-AAAA--AAGGGCCAACC--------------------CAAAGAAAGTACAAA-----AC----------------------------GCAACGAGAA---------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............................................................................................................................................................................................................................ATCGGCTGAAATTGCTGGAGCAAGA.........................................................................................................................................................................................................................2511.00110000
...................................................................................................................................................ACTACAGCTGTCTGCCGCATCTGGCCA...................................................................................................................................................................................................................................................................................................2711.00100010
...........................................................................................................................................................................................................................AATCATCGGCTGAAATTGC...................................................................................................................................................................................................................................1911.00110000
........................................................................................................................................................................................................................................................................................................................................TGTCTAAGGAA----AA--CAAAGCA...............................................................................................................2011.00101000
.......................................................................................................................................................................................................................................................................................................................................................................AAAA--AAGGGCCAACC--------------------CAAAGAAAGTACA........................................................2811.00100100
...................................................................................................AACGAACGCTGCGTAAGTTTA.........................................................................................................................................................................................................................................................................................................................................................2111.00101000
dp5
CCCAGACAGCAGAGACGTCGAGCCAGCAGCACATCACCATGCAGC-AGCAGCCGGGAAACAGTGG-----CAGCTCCAGT---AACAAGGCCAGCCGCCAGCGGGCGGTGCGTAAGTTTAAATAGCAATTACTGAACCTGCTGATGCACTACAGCTGCCTGCCACACCTGGCGTGTC-------------------------GG---CCCA----------------------------------------------GGCGG------TTGCAACTGCATTTGG-------------------ATCCCGAGCCCC---AACCCGTGCACGTCTAAGCA--GGAAA--CAGAGC----TGAAAA--GAGGGCCCACCCCA------------------------------------------ACGAACAGGAACGGATA-ACTAAATGGAA------TTACATCGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................................................................................................................................................................................................................................................................CATTTGG-------------------ATCCCGAGCCCC---AACCC..............................................................................................................................................2411.0010010000000
...............................................................................................................................ATTACTGAACCTGCTGATGCACTAC.........................................................................................................................................................................................................................................................................................................................2511.0010000000010
....GACAGCAGAGACGTCGAGCCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000001000
.................................................................................................................................TACTGAACCTGCTGATGCACTACAGC......................................................................................................................................................................................................................................................................................................................2611.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGGAACGGATA-ACTAAA....................2011.0010000010000
......................CCAGCAGCACATCACCATGCAGC-AG.................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
..................................................................................................................................................................................................................A----------------------------------------------GGCGG------TTGCAACTGCATTTGG-------------------ATCCC.............................................................................................................................................................2711.0010001000000
..............................................................................................................................................................................................................................................................................................................................................................................AGGGCCCACCCCA------------------------------------------ACGAACAG....................................2111.0010100000000
...........................................................................................................................................................TGCCTGCCACACCTGGCGTG..................................................................................................................................................................................................................................................................................................2011.0010100000000
.......................................................................AGCTCCAGT---AACAAGGCCAG...................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..............................................................................................................................................................................................................................................................................................................................................AGCA--GGAAA--CAGAGC----TGAAA.......................................................................................................2011.0010100000000
droPer2
C----------------------------------ACCATGCAGC-AGCAGCCGGGCAACAGTGG-----CAGCTCCAGT---AACAAGGCCAGCCGCCAGCGGGCGGTGCGTAAGTTTAAATAGCAATTACTGAACCTGCTGATGCACTACAGCTGCCTGCCACACCTGGCGTGTC-------------------------GG---CCCA----------------------------------------------GGCGG------TTGCAACTGCATTTGG-------------------ATCCCGAGCCCC---AACCCGTGCACGTCTAAGCA--GGAAA--CAGAGC----TGAAAA--GAGGGCCCACCCCA------------------------------------------ACGAAAAGGAACGGATA-ACTAAATGGAA------TTGAATCGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................AATAGCAATTACTGAACCT......................................................................................................................................................................................................................................................................................................................................1912.002200000
................................................................................................GCCAGCGGGCGGTGCGTA...............................................................................................................................................................................................................................................................................................................................................................1811.001010000
................................................................................................GCCAGCGGGCGGTGCGTAAG.............................................................................................................................................................................................................................................................................................................................................................2011.001000001
...............................................................................................................................................................................................................................................................................................................................................................GC----TGAAAA--GAGGGCCCACCCC.......................................................................................2111.001000001
........................................................................................................................................................................................................................................................................................................................................................................AAA--GAGGGCCCACCCCA------------------------------------------ACG.........................................2011.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACGGATA-ACTAAATGGAA------TT.......2311.001010000
..................................................................................................................................................................................................................................................................................................................................CGTGCACGTCTAAGCA--GGAAA--C.....................................................................................................................2211.001000001
........................................GCAGC-AGCAGCCGGGCAACAGTGG-----CAGC.......................................................................................................................................................................................................................................................................................................................................................................................................2811.001000001
............................................................................................................................................................................................................................................................................................................................................................AGAGC----TGAAAA--GAGGGCCA............................................................................................1911.001000001
droAna3
C----------------------------------ACATTGCCAGCTGGAAAC-CGAAACGGAAG--CGGAAGCTCAAACGTCTCCAAGAACGGCAAACAGAGAGCCGGCCGCAAGCTCAAATAGCAATTACTGAACCTGCTGATGCACTACAGCTGCCTGCCACACCTGGCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........................................................................................................................................GCTGATGCACTACAGCTGCCTGCCACA...........................................................................................................................................................................................................................................................................................................2711.001100000
..................................................AAC-CGAAACGGAAG--CGGAAGCTCAAAC.................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
................................................................................GTCTCCAAGAACGGCAAACAGAGAGC.......................................................................................................................................................................................................................................................................................................................................................................2611.001000001
........................................GCCAGCTGGAAAC-CGAAACG....................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
....................................................................................................GAGAGCCGGCCGCAAGCTC..........................................................................................................................................................................................................................................................................................................................................................1911.001100000
................................................GAAAC-CGAAACGGAAG--CGGAAGCTCAAA..................................................................................................................................................................................................................................................................................................................................................................................................2811.001000010
..................................................................................................CAGAGAGCCGGCCGCAAGCTCA.........................................................................................................................................................................................................................................................................................................................................................2211.001000001
..............................................................................................................................................GATGCACTACAGCTGCCTGCCACAC..........................................................................................................................................................................................................................................................................................................2511.001100000
droBip1
C----------------------------------ACATTGCCAGCTGGAAAC-CGAAGCGGAAG--CGGAAGCTCAAACGTCTCCAAGAACGGCAAACAGAGAGCCGGCCGCAAGCTGAAATAGCAATTACTGAACCTGCTGATGCACTACAGCTGCCTGCCACACCTGGCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
ATG----------------------GCAG---------------------------------CAG-----C---------GTCTCCAAGAACGGCAAACAGAAGTCCGCCCGCAAGCTCAAATAGCAATTACTGAACCTGCTGATGCACTACAGCTGCCTGCCGCACCTGGCGTGTG-------------------------GC---TCCAAA---------TGGCGTCCCAAATAC-------------CTATACCGACAG------CTGGAACCCAAATTGG-------------------AGAGCGAGCCCC---AACCTGTCCACGTGTAACAA----------------------------AACCC-------GGAGATTGACAAG-GAATAAGCGAGAGTACAAAAAAACGCATA-------TGCAACGAAACGGAGAATGCTGTAAT---T-----AASizeHit CountTotal NormTotal
No Reads
droFic1
C----------------------------------AGGTTGCCGGCAGGAAGC-GGAAGTGGCGG-----C---------GTCTCGAAGAACGGCAAACAGAGGTCCGCCCGCAAGTTCAAATAGCAATTACTGCAGCTGCTGATGCACTACAGCTGCCTGCCACACCTGGCATTCG-------------------------GT---TGCAAG----------------------------------TCGCATTACCGGCAG------CTGGCAACCAATCTGG-------------------ACCATGAACCCCCTGAACCCGTGCACGTCTAAACCC----------------------------------------A-------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
C----------------------------------ACGTTGCCGGCAGGAAGT-GGAAACGGAGG-----C---------GTCTCCAAGAACAGCAAACAGCGGTCCGCCCGCAAGTTCAAATAGCAATTACTGAAGCTGCTGATGCACTACAGCTGCCTGCCACACCTGGCGTGTC-------------------------GC---TCCAAG----------------------------------TTGTATTACCGGCGG------CTGGAACCGAATCTGG-------------------ATACCGAACCCC---AACCCGTGCACGTCTAAACCC---------------------------------------GGCGATTAATTGACAAATCCAAGAAAGTACAAA-----GCGTA--------GCAACGAT-----GAATGCTGTAGAAG---------SizeHit CountTotal NormTotal
No Reads
droRho1
C--------------------------------------TGCCGGCTGGAAGC-GGAA------A-----C---------GTCTCCAAGAACAGCAAACAGAGGTCCGCCCGCAAGTTCAAATAGCAATTAATGAAGCTGCTGATGCACTACAGCTGCCTGCCACACCTGGCGTGTC-------------------------GC---CCCAAG----------------------------------TCGCATTACCGGCGG------CTGGAACCGAATGTGG-------------------ATACCGAACCCC---AACCCGTGCACGTCTAACCC----------------------------------------GGCGATTGATTGACAAATCCAAGAAAGTACAAA-----GCGTA-------TGCAACGAC-----GAATGCTGTAAAAA---------SizeHit CountTotal NormTotal
No Reads
droBia1
ACA----------------------GCAGCACATCACATTGCCGGCCGGAAGC-GGAAACAACAG--CGGC---------GTCTCCAAGAACGGCAAACAAAGGTCGGGCCGCAAGTTCAAATAGCAATTACTGAACCTGCTGATGCACTACAGCTGCCTGCCACACCTGGCGTGTG-------------------------GC---TGCAGGTCG-------------------------------TCGCACTACCGGCGGATGCAGCTGGATCCCCCTCTGG-------------------AGACCGAACCCC---AACCCGTGCACGTCTAGCCC----------------------------------------GACGATTGATAGACAGATCCAAGAAAGTACAA----------------------------------ATGCTGTATAAA---------SizeHit CountTotal NormTotal
No Reads
droTak1
GCA----------------------GCAG---------------------------------CAA-----C---------GTCTCCAAGAACAACAAACAGAAGTCCGCCCGCAAGTTCAAATAGCAATTATTGAACCTGCTGATGCACTACAGCTGCCTGCCACACCTGGCGTGTG-------------------------GCAGCTGCAGGTCG-------------------------------CTGTACTACCGGCGGCTGCCACTGGAACCCCATCTGG-------------------ATACCGAACCCC---AACCCGTGCACGTCTAACCC-------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
C----------------------------------ACGATGCCGACTGGAAGC-GGAAACGGCAA-----C---------GTCTCCAAGAACGGCAAGCAGAGGTCCTCCCGCAAGTTCAAATAGCAATTACTGAACCTGCTGATGCACTACAGCTGCCTGCCACACCTGGCGTGTC-------------------------GC---TGTAAG----------------------------------TCGCAATATCGGCGG------CTGGAACCGAATCTGG-------------------ATACCGAACCCC---AACCCGTACACGTCTAACGC----------------------------------------GGCGATTGATAGACAGATCCACGAAAGTACAAA-----GCGAA-------TGCAACGAA-----TTATGCTGTAAAAA---------SizeHit CountTotal NormTotal
No Reads
dm3
G-------------------------------------------------------------CAG-----C---------GTCTCCAAGAGCGGCAAACAGAGGTCCGCACGCAAGTTCAAATAGCAATTACTGAAGCTGCTGATGCACTACAGCTGCCTGCCACACCTGGCGTGCC-------------------------GC---TGCAAG----------------------------------TCGCAGTATCGGCGG------CTGGAACCCAATCTGG-------------------ATACCGAACCCC---AACCCGTCCACGTCTAAACCC---------------------------------------GACGATTGATAGACAGATCCGAGGAAGTACAAA-----GC-----------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........................................................................................................................................................................GGCGTGCC-------------------------GC---TGCAAG----------------------------------TCGCA.....................................................................................................................................................................................................................2117.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000100400000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................GGCGTGCC-------------------------GC---TGCAAG----------------------------------TCGCAGTA..................................................................................................................................................................................................................2416.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................GGCGTGCC-------------------------GC---TGCAAG----------------------------------TCGCAGTAT.................................................................................................................................................................................................................2516.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................TGCTGATGCACTACAGCTGCC..................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................TGGCGTGCC-------------------------GC---TGCAAG----------------------------------TCGCAGTA..................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..........................................................................................................................................................................................................................................................................................................................................TCTAAACCC---------------------------------------GACGATTGATAGACAGA......................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................GACGATTGATAGACAGATCCGAGGAA.............................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................CGTGCC-------------------------GC---TGCAAG----------------------------------TCGCAGTA..................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................GGCGTGCC-------------------------GC---TGCAAG----------------------------------TCGC......................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................GCTGCTGATGCACTACAGCTGCC..................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................CCTGCCACACCTGGCGTGCC-------------------------GC---TG................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................G------CTGGAACCCAATCTGG-------------------ATACC.............................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................AGCTGCTGATGCACTACAGCTGCC..................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................TGGCGTGCC-------------------------GC---TGCAAG----------------------------------TCGCAGTATCG...............................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................CCC---AACCCGTCCACGTCTAAACCC---------------------------------------.......................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................GG------CTGGAACCCAATCTTT-------------------..................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................TGATAGACAGATCCGAGGA..............................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................GTCTAAACCC---------------------------------------GACGATTGAT.............................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................CCTGGCGTGCC-------------------------GC---TGCAAG----------------------------------TCGCAGTA..................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................GTCTAAACCC---------------------------------------GACGATTGATAGA..........................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................TAGCAATTACTGAAGCTGCTGATGCAC............................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................TGGCGTGCC-------------------------GC---TGCAAG----------------------------------T.........................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................GACAGATCCGAGGAAGTAC.........................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
....................................................................................................................................TGAAGCTGCTGATGCACTACAGCT.....................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................CAATTACTGAAGCTGCTGATGCACT...........................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................CGCACGCAAGTTCAAATAGCAAT................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................TCTCCAAGAGCGGCAAACAGAGGTCC......................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................GGCGTGCC-------------------------GC---TGCAAG----------------------------------TCGCAGTATC................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................TTACTGAAGCTGCTGATGCA.............................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................GGCAAACAGAGGTCCGCA...................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................ATCTGG-------------------ATACCGAACCCC---AACCCG.............................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................TGCCACACCTGGCGTGCC-------------------------GC---TGCA..............................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................GGCGG------CTGGAACCCAATCTGA-------------------TC................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................GGCGTGCC-------------------------GC---TGCAAG----------------------------------TCGCG.....................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................GACGATTGATAGACAGATCATC.................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................TGGCGTGCC-------------------------GC---TGCAAG----------------------------------TCGCA.....................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................ACCTGGCGTGCC-------------------------GC---TGCAAG----------------------------------TCG.......................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TAGACAGATCCGAGGAAGTAC.........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................GCAAGTTCAAATAGCAATTACTGAAGC.......................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................GATAGACAGATCCGAGGAAGT...........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000
................................................................G-----C---------GTCTCCAAGAGCGGCAAACAGAGGT........................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
......................................................................................................................................AAGCTGCTGATGCACTACAGCTGCC..................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................TGGCGTGCC-------------------------GC---TGCAAG----------------------------------TCGC......................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................CAAGTTCAAATAGCAATT...............................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................CAGAGGTCCGCACGCAAGTTCAAATA.....................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................TGAAGCTGCTGATGCACTACAGCTGCT..................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TAGACAGATCCGAGGAAG............................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................AACAGAGGTCCGCACGCA...............................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................TACCGAACCCC---AACCCGTCCACGTCTAAAC................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................GCGGCAAACAGAGGTCCGCA...................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................AACCCC---AACCCGTCCACGTCTAA..................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................TGGCGTGCC-------------------------GC---TGCAAG----------------------------------TCGCAGT...................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................TGCTGATGCACTACAGCTGTG..................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................TCCACGTCTAAACCC---------------------------------------GACGATTGA..............................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................AAATAGCAATTACTGAAGCT......................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................TCGGCGG------CTGGAACCCAATCTGG-------------------ATACC.............................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................ACACCTGGCGTGCC-------------------------GC---TGCAAG----------------------------------..........................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................GCTGCTGATGCACTACAGCT.....................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................ACGATTGATAGACAGATCCGAGGAAG............................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
......................................................................................................................................................................................................................................................................................ATCTGG-------------------ATACCGAACCCC---AACCCGTC...........................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................AGCTGCTGATGCACTACA........................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................GCTGATGCACTACAGCTGCCT.................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
G-------------------------------------------------------------CAG-----C---------GTCTCCAAGAGCGGCAAACAGAGGTCCGCCCGCAAGTTCAAATAGCAATTACTGAAGCTGCTGATGCACTACAGCTGCCTGCCACACCTGGCGTGCC-------------------------GC---TGCAAG----------------------------------TCGCAGTACCGGCGG------CTGGAACCCAATCTGG-------------------ATACCGAACCCC---AACCCGTCCACGTCTAACCC-------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................................................................ATAGCAATTACTGAAGCT......................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
...............................................................................................................................................................................................................TGCAAG----------------------------------TCGCAGTACCGGCGG------CTG..................................................................................................................................................................................................2411.00100000000001000000
.....................................................................................CAAGAGCGGCAAACAGAGGTC.......................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
droSec2
G-------------------------------------------------------------CAG-----C---------GTCTCCAAGAGCGGCAAACAGAGGTCCGCCCGCAAGTTCAAATAGCAATTACTGCAGCTGCTGATGCACTACAGCTGCCTGCCACACCTGGCGTGCC-------------------------GC---TGCAAG----------------------------------TCGCAGTACCGGCGG------CTGGAACCCAATCTGG-------------------ATACCGAACCCC---AACCCGTCCACGTCTAACCC-------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................................................................................................................TACTGCAGCTGCTGATGCACTA..........................................................................................................................................................................................................................................................................................................................2211.0011000
droYak3
C----------------------------------AGGATGCAGCCAGGCGGC-GGAAATGGCAG-----C---------GTCTCCAAGAGCGGCAAACAGAGGTCCGCCCGCAAGTTCAAATAGCAATTACTGAAGCTGCTGATGCACTACAGCTGCCTGCCACACCTGGCGTGCC-------------------------GC---TGCAAG----------------------------------TCGCAGTACCGGCGG------CTGGAACCCAATCTGG-------------------ATACCGAACCCC---AACCCGTACACGTCTAACCC----------------------------------------GACGATTGATAGACAGATCCGAGGACGTACAAA-----GCGTA-------TGCCACGTT-----AAATGCTGTACAAA---------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................GACGATTGATAGACAGATCC...................................................................2011.00100000100000
......................................ATGCAGCCAGGCGGC-GGAAATGGCA.................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................GAGGACGTACAAA-----GCGTA-------T....................................1911.00100000010000
...........................................GCCAGGCGGC-GGAAATGGCAG-----C---------GTCTCCA..........................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000
..............................................................................................................................................................................................................................................................................................................................AACCCGTACACGTCTAACCC----------------------------------------GACG...................................................................................2411.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................GTACAAA-----GCGTA-------TGCCACG..............................1911.00100001000000
.............................................................................................................................................................................................................................................................................................................................................................................................GATTGATAGACAGATCCGAGGAC.............................................................2311.00110000000000
droEre2
C----------------------------------AGGATGCAGCCAGGCGGA-GGAAATGACGG-----C---------GTATCCAAGGGCGGCAAACAGCGGTCCGCCCGCAAGTTCAAATAGCAATTACTGAAGCTGCTGATGCACTACAGCTGCCTGCCACACCTGGCGTGCC-------------------------GC---TGCAAG----------------------------------TCGCAGTACCGGCGG------CTGGAACCCAATCTGG-------------------ATACCGAACCCC---AACCCGTCCACGTCTAACCC----------------------------------------GACGATTGATAGACAGATCCGAGAAAGTACAAA-----GCGTA-------GGCCACGAT-----AAATGCTGTACAAATT-------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................GATGCAGCCAGGCGGA-GGAAATG....................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
.........................................................................................................................................CTGCTGATGCACTACAGCTGCC..................................................................................................................................................................................................................................................................................................................2211.0011000000
.........................................................................................GGCGGCAAACAGCGGTCCG.....................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
.........................................................................................................................................................................................................................................................................................................................CC---AACCCGTCCACGTCTAACCC----------------------------------------G......................................................................................2311.0010000010
........................................................................................................................................................................TGGCGTGCC-------------------------GC---TGCAAG----------------------------------TCGCA.....................................................................................................................................................................................................................2211.0011000000
..................................................................................................................................................................................................................................................................................................................CCGAACCCC---AACCCGTCCACGTCTAACCC----------------------------------------.......................................................................................2911.0011000000
........................................................................................................................................................................TGGCGTGCC-------------------------GC---TGCAAG----------------------------------TCGC......................................................................................................................................................................................................................2111.0010000010
.................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTACAAA-----GCGTA-------GGCC.................................1911.0010000100
......................................................................................................................................................................................................................................................................................ATCTGG-------------------ATACCGAACCCC---A..................................................................................................................................................1911.0010000010
..........................................................................................................................................................................................................................................................................................................................................................................................GACGATTGATAGACAGATCC...................................................................2011.0010000100
...............................................................................................................................................................................................................................................................................................................................ACCCGTCCACGTCTAACCC----------------------------------------.......................................................................................1911.0010000010
...............................................................................................................................................................TGCCACACCTGGCGTGCC-------------------------GC---..................................................................................................................................................................................................................................................................2011.0011000000
...........................................................................................................................................................................................................................................................................................................................................CTAACCC----------------------------------------GACGATTGATAGACAG.......................................................................2311.0010000100
..........................................................................................................................................................................................................................................................................................................................................................................................GACGATTGATAGACAGATCCGAGAA..............................................................2511.0010000010
.............................................................ACGG-----C---------GTATCCAAGGGCGGCAAAC..............................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
........................................................................................GGGCGGCAAACAGCGGTC.......................................................................................................................................................................................................................................................................................................................................................................1811.0010001000
.................................................................................................................................................................................................................................................................................................................................................C----------------------------------------GACGATTGATAGACAGATCC...................................................................2111.0010000010

Generated: 05/16/2015 at 11:50 PM