dvi_6727

CDS [Dvir\GJ22015-cds]; exon [dvir_GLEANR_7330:1]; intron [Dvir\GJ22015-in]; Antisense to intron [Dvir\GJ20328-in]

Name	Class	Family	Strand
DMR_DV	Unknown	Unknown	-
Helitron-1N1_DVir	RC	Helitron	+

Species	Coordinate	ID	Alignment
droVir3	scaffold_12875:13658177-13658427 +	dvi_6727	CCGCGAGGAGATATGACCTTC--------------------------CAAATCATCAC-----------------GATTTTTTTAAAATCGAGGTCGGTGCGAAAATCGAAACTTTTTCGATGATTTTTTTTAATATCTCGGGTAATAGCTCCGCGCGG-------------------------AGATATGACGTTCCAAAACGACAT---------------------------------------------------------AACTCCGC-----------------------GCGGA----------------ACATTTAAGAGCTATAGAATTG-AAATT-TTAGATGTAGGTGCTCCTAGTGCCTGC---GCGGATCGAGTTTGTTT--CCTATAATCGATAA--CTTACTCCGTTTC
droMoj3	scaffold_6473:15838366-15838468 -		GCAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTTAAGAGCTAAAGACTTG-AAATTTATTGTCTTGGGATCGCATATTGCACGC---GCAAATCAAGTTTGTTC--CCAAAAATCGATAA--CT-ACTCCAGTTG
droGri2	scaffold_14853:7867907-7868036 -		GGA------GATATCTC---------------------------------------------------------------------------------------------------------------------------------------CA---------------------------------------------AGCACACAG---------------------------------------------------------ATCTCA---------------------------GA-----------------GACTTTAAGAGCTAGAGACTTC-AAATT-TGGAATATAGGTTCTCGTATACCAGGC---GCAGATCAAGTTTGCTTTATTTTTTATCGATAA--CTGCCTCCGTTTC
droWil2	scf2_1100000004954:5113830-5113968 +		TCGCGCGGAGATATGTCGTTC--------------------------C------GCAG----ATCACCGGCGA----------------------------------TGA--------------TATAAT-AATAAACCCCAATAATAATTTCGCGCGGAGATATGTCGTTTTTCTAACGGCGGAGATATGACGTTTTGAAACGACAT---------------------------------------------------------ATCTCCGA-----------------------GCAGA--------------------------------------------------------------------------------T----------------------------------------CA
dp5	Unknown_group_95:17651-17756 +		CCGCGCGGAGATATGTCGTCT--------------------------CAAAACGTCAT----AAC-------------------------------------------------------------------------------------TCCGCGCGGAGATATGTCGTTTGTGGAACGGCGGAGATATGTCGTTTCAAAACGTCAT---------------------------------------------------------ATCTCCGC-----------------------GCGGA---------------------------------------------------------------------------------------------------------------------------
droPer2	scaffold_271:5968-6100 +		CCGCGCGAAGATATGACGTTT--------------------------TGAAACGACAT----ATCTCCGCCGTTCC--------------------------ACAAACGA----------------------------------CATATCTCTGCGCGG-------------------------AGCTATGACGTTTTGAGACGACAT---------------------------------------------------------ATCTCCGA-----------------------GCGGA-----------------------------------------------------------------------------------AGTATGTCG--CTTTAAAATTACATAATT-----------
droAna3	scaffold_13099:1568163-1568231 +		AA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-TTATATGTAGACTTCTATAATACCCAC---GCAGATCAAGTTTCTTT--TTTATTTT--------TTTGCCGGGCTCC
droBip1	scf7180000394710:176-296 +		ATTT----------AACATTC--------------------------CGAAG--TAAT----C-------------------------------------------------------------------------------------A--------------------------------------------TTGATATAGCCATGT---------------------------------------------------------CCGTCCGT-----------------------CCGA-----------------GACTATAAGAGCTATAGCTATA-AGATT-TGGGATAGGGACTCCTATAGGACCCAC---GCAGTGGAAGTTTGTTT--C----------------------------
droKik1	scf7180000299869:103-315 +		CCGCGCGGAGCTATGTCGCTT--------------------------TAAAGCGACAT----ATCTCCGCCGAACT--------------------------ACAAACGA----------------------------------CATATCTCCGCGCGG-------------------------AGTTATGTCGTTTGCAAGCGACAT---------------------------------------------------------ATCTCCGCCAAACTACTAACGACATACAGTGGCGAACTTAATTTTTGCCACC-GTTT-------------TTCT-TCATT-TAACATAGAA---------ATATTTAC---TTGAATCAAATTTGATT--TAAATATT--------TT-GATCAATTTC
droEle1	scf7180000490968:30176-30278 +		TTATTTTAATTTCTG------------------------------------GCGTAAT----T-------------------------------------------------------------------------------------TTTCCGTCTTT-------------------------AGATTTGTCGTTTCAAAA-------------------------------------------------------------------------------------------------------------------GACTCCGAGTTCAAAAGATTTCGAAACTCTTTGGTATGGGTTC---------------------------------------------CAGC-----------TGTA
droRho1	scf7180000778200:8987-9108 +		CCGCGCGAAATTATTTCGTTT--------------------------TTAAAGGTCCT----ATC-------------------------------------------------------------------------------------TCCGCCCGGAGATGTGTCGTTTGCAGAAGCGCGGAGATATGCCGTTTTGAGACGACAT---------------------------------------------------------AACTCCC---------------------------------------------------------------------------------------------------CC---GCTGATCAACGC-----------------GGAG-----------TTAT
droBia1	scf7180000299101:14139-14252 +		CCGCGCGGAGTTATGTCGCTTT-------------------------TAAAACGACATATGTATCTCCGCTGACCA--------------------------AAAAGCGA----------------------------------CATATTTCCGCGCGG-------------------------AGATATGACGTTTCAAGACGACAT---------------------------------------------------------ATCTCCGC-----------------------GCGGA------------------------------------------------------------------------------------------------------------------------GTA
droTak1	scf7180000410441:34-171 -		TCGCGCGGAGATATGTCGTTT--------------------------TTAAACGTCAT----ATC-------------------------------------------------------------------------------------TCCGCGCGGAGATAAGTCGTTTGTAGAAGGGCGGAGCTCTGCGTTTTTAAAACGACAT---------------------------------------------------------ATCTCCCC-----------------------GCGAA-----------------GTTTTAAAAGCTACAAAGTTT-TTTTT-TTATAT------------------------------------------------------------------------
droEug1	scf7180000408477:1685-1780 +		CGGAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATAAGCGATAGAAAGTTC-GAATT-TAGCATGTAGGTTTTCATGATGCTCCCAATGCGAATTCTTTTTTTTC--CGATTAAGCCATAG-----------TTTA
droYak3	v2_chrUn_1329:7100-7166 -		TCGCGAGGACACATTTCGTTA--------------------------C-------------------CCCCTACCAATTATCCAAA----------------------------------------------------------AATCATTCTGGATGGAGA-------------------------------------AAACGAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2	scaffold_4690:18024964-18025142 +		CCGCGCGGAGATATGTCGTTTTTAGTTTGACGGAAATATATCGTTTTTAAAGCGACAT----AAC-------------------------------------------------------------------------------------TCCACCA------------------------------------------ATAAGAAA-AGGACGGAGATATGTCGAGTTTAGTTCGCCGAGGATATGTCGATTCAAAAACGACATATTTCCGA-----------------------A---------------------AACCTATTAGCGACATACAAA-TTAAT-ATAAGTGTGG-------------------------------------------------------------------G

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droVir3

CCGCGAGGAGATATGACCTTC--------------------------CAAATCATCAC-----------------GATTTTTTTAAAATCGAGGTCGGTGCGAAAATCGAAACTTTTTCGATGATTTTTTTTAATATCTCGGGTAATAGCTCCGCGCGG-------------------------AGATATGACGTTCCAAAACGACAT---------------------------------------------------------AACTCCGC-----------------------GCGGA----------------ACATTTAAGAGCTATAGAATTG-AAATT-TTAGATGTAGGTGCTCCTAGTGCCTGC---GCGGATCGAGTTTGTTT--CCTATAATCGATAA--CTTACTCCGTTTC	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
...........................................................................................................................................................................................................................................................................................................................................TAGAATTG-AAATT-TTAGATGTAGGT..................................................................	25	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................TCCAAAACGACAT---------------------------------------------------------AACTCCGC-----------------------G...............................................................................................................................	22	20	0.40	8	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................TAGTGCCTGC---GCGGATCGAGTTTGTT................................	26	8	0.25	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................AAATCGAGGTCGGTGCGAAAAT.............................................................................................................................................................................................................................................................................................................................	22	20	0.25	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................AAATCGAGGTCGGTGCGAAAATCGAAA........................................................................................................................................................................................................................................................................................................................	27	20	0.20	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................TAATATCTCGGGTAATAGCTCCGCGCGG-------------------------................................................................................................................................................................................................................................................	28	20	0.20	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................CTAGTGCCTGC---GCGGATCG........................................	19	12	0.17	2	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................TTAGATGTAGGTGCTCCTAGTGCC......................................................	24	20	0.15	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0
..........................................................................................................................................................................................................................................................................................................................................................TTAGATGTAGGTGCTCCTAGTGC.......................................................	23	20	0.15	3	0	0	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................TTG-AAATT-TTAGATGTAGGTGCTCC.............................................................	25	20	0.15	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................TCCGCGCGG-------------------------AGATATGACGTT....................................................................................................................................................................................................................................	21	20	0.15	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................TCCTAGTGCCTGC---GCGGATCGAGTTT...................................	26	9	0.11	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................GGTGCTCCTAGTGCCTGC---GCGG............................................	22	10	0.10	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................ATATCTCGGGTAATAGCTCC...............................................................................................................................................................................................................................................................................	20	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................AAACGACAT---------------------------------------------------------AACTCCGC-----------------------GCGGA----------------A..........................................................................................................	23	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................TAGATGTAGGTGCTCCTAGTGC.......................................................	22	20	0.10	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................TTAAAATCGAGGTCGGTGCGA.................................................................................................................................................................................................................................................................................................................................	21	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................TCCTAGTGCCTGC---GCGGATCGAGT.....................................	24	10	0.10	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................AACGACAT---------------------------------------------------------AACTCCGC-----------------------GCGGA----------------...........................................................................................................	21	20	0.10	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................TGCTCCTAGTGCCTGC---GCGGA...........................................	21	11	0.09	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................TCCTAGTGCCTGC---GCGGATCGAG......................................	23	12	0.08	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................CCTGC---GCGGATCGAGTTTGTT................................	21	13	0.08	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
........................................................................................................................................................................................................................................................................................................................................................................................................T--CCTATAATCGATAA--CTTACTCCGTTT.	27	13	0.08	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................CTATAATCGATAA--CTTACTCCGTTT.	25	13	0.08	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................CTGC---GCGGATCGAGTTTG..................................	18	14	0.07	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................TGCCTGC---GCGGATCGAGT.....................................	18	15	0.07	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................ATCGAGTTTGTTT--CCTATAATCGATAA--.............	27	16	0.06	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................AGTTTGTTT--CCTATAATCGATAA--CT...........	25	16	0.06	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................ATCGAGTTTGTTT--CCTATAATCG...................	23	17	0.06	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................ATCGAGTTTGTTT--CCTATAATCGAT.................	25	17	0.06	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................CGAGTTTGTTT--CCTATAATCGATAA--C............	26	17	0.06	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................CGAGTTTGTTT--CCTATAA......................	18	19	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................TTAAAATCGAGGTCGGTGC...................................................................................................................................................................................................................................................................................................................................	19	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................TAATAGCTCCGCGCGG-------------------------AGATAT..........................................................................................................................................................................................................................................	22	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........ATATGACCTTC--------------------------CAAATCATCAC-----------------.............................................................................................................................................................................................................................................................................................................................................................	22	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................TTG-AAATT-TTAGATGTAGGTG.................................................................	21	20	0.05	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................AATATCTCGGGTAATAGCTCCGCGCG..........................................................................................................................................................................................................................................................................	26	20	0.05	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................GTAATAGCTCCGCGCGG-------------------------AGAT............................................................................................................................................................................................................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................T-TTAGATGTAGGTGCTCCTAGTGC.......................................................	24	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................TAAAATCGAGGTCGGTGCGAAAATCGA..........................................................................................................................................................................................................................................................................................................................	27	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................TTTTTTTAATATCTCGGGT........................................................................................................................................................................................................................................................................................	19	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................ATAATCGATAA--CTTACTCCGT...	21	20	0.05	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................TGATTTTTTTTAATATCTCGGGTA.......................................................................................................................................................................................................................................................................................	24	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................TT-TTAGATGTAGGTGCTCCTAGTGC.......................................................	25	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................G-AAATT-TTAGATGTAGGT..................................................................	18	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................TTTTTTTAATATCTCGGGTAATAGCTCC...............................................................................................................................................................................................................................................................................	28	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................AAATCGAGGTCGGTGCGAAAATC............................................................................................................................................................................................................................................................................................................................	23	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................AATATCTCGGGTAATAGCTCC...............................................................................................................................................................................................................................................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................TTAAAATCGAGGTCGGTGCGAAAATCG...........................................................................................................................................................................................................................................................................................................................	27	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................ATGTAGGTGCTCCTAGTGCCT.....................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................ATT-TTAGATGTAGGTGCTCCTAGTGC.......................................................	26	20	0.05	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................ATT-TTAGATGTAGGTGCTCCTAGTGCC......................................................	27	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

GCAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTTAAGAGCTAAAGACTTG-AAATTTATTGTCTTGGGATCGCATATTGCACGC---GCAAATCAAGTTTGTTC--CCAAAAATCGATAA--CT-ACTCCAGTTG	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
No Reads

droGri2

GGA------GATATCTC---------------------------------------------------------------------------------------------------------------------------------------CA---------------------------------------------AGCACACAG---------------------------------------------------------ATCTCA---------------------------GA-----------------GACTTTAAGAGCTAGAGACTTC-AAATT-TGGAATATAGGTTCTCGTATACCAGGC---GCAGATCAAGTTTGCTTTATTTTTTATCGATAA--CTGCCTCCGTTTC	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
No Reads

droWil2

TCGCGCGGAGATATGTCGTTC--------------------------C------GCAG----ATCACCGGCGA----------------------------------TGA--------------TATAAT-AATAAACCCCAATAATAATTTCGCGCGGAGATATGTCGTTTTTCTAACGGCGGAGATATGACGTTTTGAAACGACAT---------------------------------------------------------ATCTCCGA-----------------------GCAGA--------------------------------------------------------------------------------T----------------------------------------CA	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
...........TATGTCGTTC--------------------------C------GCAG----ATCACCGGCGA----------------------------------.............................................................................................................................................................................................................................................................................................................................	26	10	0.60	6	0	2	0	4	0
..................................................................................................................................................TAATTTCGCGCGGAGATATGTCG...............................................................................................................................................................................................................................................................	23	20	0.15	3	0	1	0	0	2
..................TTC--------------------------C------GCAG----ATCACCGGCGA----------------------------------TG...........................................................................................................................................................................................................................................................................................................................	21	9	0.11	1	0	0	0	1	0
...................................................................................................................................................AATTTCGCGCGGAGATATGTCG...............................................................................................................................................................................................................................................................	22	20	0.10	2	0	0	1	1	0
...............................................................................................................................................TAATAATTTCGCGCGGAGATATGTCGT..............................................................................................................................................................................................................................................................	27	10	0.10	1	0	1	0	0	0
...........TATGTCGTTC--------------------------C------GCAG----ATCACCGGCG................................................................................................................................................................................................................................................................................................................................................................	25	10	0.10	1	0	0	0	1	0
...............TCGTTC--------------------------C------GCAG----ATCACCGGCGA----------------------------------.............................................................................................................................................................................................................................................................................................................................	22	10	0.10	1	0	1	0	0	0
.....................................................................................................................................TAAACCCCAATAATAATTTCGCGCGG.........................................................................................................................................................................................................................................................................	26	10	0.10	1	0	0	0	1	0
...........TATGTCGTTC--------------------------C------GCAG----ATCACCGG..................................................................................................................................................................................................................................................................................................................................................................	23	11	0.09	1	0	1	0	0	0
....GCGGAGATATGTCGTTC--------------------------C------..................................................................................................................................................................................................................................................................................................................................................................................	18	12	0.08	1	0	1	0	0	0
..........ATATGTCGTTC--------------------------C------GCAG----ATCAC.....................................................................................................................................................................................................................................................................................................................................................................	21	12	0.08	1	0	0	0	1	0
.........................................................................................................................................................................TTTTTCTAACGGCGGAGATAT..........................................................................................................................................................................................................................................	21	20	0.05	1	0	1	0	0	0
TCGCGCGGAGATATGTCGTT....................................................................................................................................................................................................................................................................................................................................................................................................................	20	20	0.05	1	0	1	0	0	0
..................................................................................................................................................TAATTTCGCGCGGAGATATGTCGTTTA...........................................................................................................................................................................................................................................................	27	20	0.05	1	0	0	1	0	0
.....................................................................................................................................................TTTCGCGCGGAGATATGTCG...............................................................................................................................................................................................................................................................	20	20	0.05	1	0	0	0	0	1
..................................................................................................................................................TAATTTCGCGCGGAGATATGTCGTTT............................................................................................................................................................................................................................................................	26	20	0.05	1	0	0	0	1	0
..................................................................................................................................................................................CGGCGGAGATATGACGTTTTGAAACGAC..........................................................................................................................................................................................................................	28	20	0.05	1	1	0	0	0	0
.......................................................................................................................................................TCGCGCGGAGATATGTCGTTT............................................................................................................................................................................................................................................................	21	20	0.05	1	0	0	0	0	1
................................................................................................................................................................................................CGTTTTGAAACGACAT---------------------------------------------------------ATCTCCG........................................................................................................................................................	23	20	0.05	1	0	1	0	0	0
.....................................................................................................................................................TTTCGCGCGGAGATATGTCGG..............................................................................................................................................................................................................................................................	21	20	0.05	1	1	0	0	0	0

dp5

CCGCGCGGAGATATGTCGTCT--------------------------CAAAACGTCAT----AAC-------------------------------------------------------------------------------------TCCGCGCGGAGATATGTCGTTTGTGGAACGGCGGAGATATGTCGTTTCAAAACGTCAT---------------------------------------------------------ATCTCCGC-----------------------GCGGA---------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
..............................................................................................................................................................GAGATATGTCGTTTGTGGAAC.....................................................................................................................................................................................................................................................	21	3	767.00	2301	0	232	0	0	0	0	2	1863	203	1
..............................................................................................................................................................GAGATATGTCGTTTGTGGAACG....................................................................................................................................................................................................................................................	22	3	661.00	1983	0	69	0	0	0	0	0	1856	58	0
.............................................................................................................................................................GGAGATATGTCGTTTGTGGAA......................................................................................................................................................................................................................................................	21	3	534.00	1602	0	27	0	0	0	0	0	1503	71	1
...............................................................................................................................................................AGATATGTCGTTTGTGGAACG....................................................................................................................................................................................................................................................	21	3	509.67	1529	0	110	0	0	0	0	0	1403	16	0
...............................................................................................................................................................AGATATGTCGTTTGTGGAACGG...................................................................................................................................................................................................................................................	22	3	487.33	1462	0	210	0	0	0	0	0	1235	17	0
...............................................................................................................................................................AGATATGTCGTTTGTGGAAC.....................................................................................................................................................................................................................................................	20	3	439.00	1317	0	156	0	0	0	0	0	1113	48	0
..............................................................................................................................................................GAGATATGTCGTTTGTGGAACGG...................................................................................................................................................................................................................................................	23	3	393.33	1180	0	44	0	0	0	0	0	1100	36	0
................................................................................................................................................................GATATGTCGTTTGTGGAACGG...................................................................................................................................................................................................................................................	21	3	144.33	433	0	104	0	0	0	0	4	318	7	0
..............................................................................................................................................................GAGATATGTCGTTTGTGGAA......................................................................................................................................................................................................................................................	20	3	98.00	294	0	21	0	0	0	0	0	222	50	1
.................................................AAACGTCAT----AAC-------------------------------------------------------------------------------------TCCGCGCGG.........................................................................................................................................................................................................................................................................	21	2	97.00	194	0	136	0	0	0	0	0	58	0	0
.......................................................................................................................................................................CGTTTGTGGAACGGCGGAGA.............................................................................................................................................................................................................................................	20	3	61.33	184	0	47	0	0	0	1	0	134	2	0
...........................................................................................................................................................GCGGAGATATGTCGTTTGTGG........................................................................................................................................................................................................................................................	21	5	56.00	280	0	21	0	0	0	0	0	239	20	0
.............................................................................................................................................................GGAGATATGTCGTTTGTGGA.......................................................................................................................................................................................................................................................	20	6	52.00	312	0	18	0	0	0	0	0	260	34	0
......................................................................................................................................................................TCGTTTGTGGAACGGCGGAGA.............................................................................................................................................................................................................................................	21	3	51.00	153	0	39	0	0	0	0	0	114	0	0
...............................................................................................................................................................AGATATGTCGTTTGTGGAA......................................................................................................................................................................................................................................................	19	3	46.33	139	0	24	0	0	0	0	0	92	23	0
.......................................................................................................................................................................CGTTTGTGGAACGGCGGAG..............................................................................................................................................................................................................................................	19	3	45.33	136	0	26	0	0	0	0	0	104	6	0
...............................................................................................................................................................AGATATGTCGTTTGTGGAACGGT..................................................................................................................................................................................................................................................	23	3	36.67	110	0	4	0	0	0	0	0	94	12	0
......................................................................................................................................................................TCGTTTGTGGAACGGCGGAG..............................................................................................................................................................................................................................................	20	3	31.00	93	0	21	0	0	0	0	0	68	4	0
.................................................................................................................................................................ATATGTCGTTTGTGGAACGG...................................................................................................................................................................................................................................................	20	3	30.00	90	0	21	0	0	0	0	0	69	0	0
................................................................................................................................................................GATATGTCGTTTGTGGAACG....................................................................................................................................................................................................................................................	20	3	28.00	84	0	20	0	0	0	0	0	59	5	0
........................................................................................................................................................................GTTTGTGGAACGGCGGAGA.............................................................................................................................................................................................................................................	19	3	27.33	82	0	22	0	0	0	0	0	59	1	0
.............................................................................................................................................................GGAGATATGTCGTTTGTGGAAA.....................................................................................................................................................................................................................................................	22	3	26.67	80	0	1	0	0	0	0	0	78	1	0
................................................AAAACGTCAT----AAC-------------------------------------------------------------------------------------TCCGCGCG..........................................................................................................................................................................................................................................................................	21	2	25.50	51	0	37	0	0	0	0	1	13	0	0
.......................................................................................................................................................................CGTTTGTGGAACGGCGGAGATA...........................................................................................................................................................................................................................................	22	3	20.67	62	0	8	0	0	0	0	0	54	0	0
...............................................................................................................................................................AGATATGTCGTTTGTGGAACGT...................................................................................................................................................................................................................................................	22	3	20.00	60	0	1	0	0	0	0	0	56	3	0
..................................................AACGTCAT----AAC-------------------------------------------------------------------------------------TCCGCGCGGA........................................................................................................................................................................................................................................................................	21	2	18.50	37	0	18	0	0	0	0	0	19	0	0
.................................................................................................................................................................ATATGTCGTTTGTGGAACGGC..................................................................................................................................................................................................................................................	21	3	17.67	53	0	11	0	0	0	0	0	42	0	0
...............................................................AC-------------------------------------------------------------------------------------TCCGCGCGGAGATATGTCG...............................................................................................................................................................................................................................................................	21	2	16.50	33	0	15	0	0	0	0	0	18	0	0
.......................................................................................................................................................................CGTTTGTGGAACGGCGGAGAT............................................................................................................................................................................................................................................	21	3	16.33	49	0	27	0	0	0	0	1	21	0	0
......................................................................................................................................................................TCGTTTGTGGAACGGCGGA...............................................................................................................................................................................................................................................	19	3	16.33	49	0	12	0	0	0	0	0	31	6	0
............................................................................................................................................................CGGAGATATGTCGTTTGTGGA.......................................................................................................................................................................................................................................................	21	6	15.67	94	0	4	0	0	0	0	0	79	11	0
..............................................................................................................................................................GAGATATGTCGTTTGTGGAACGGT..................................................................................................................................................................................................................................................	24	3	15.33	46	0	1	0	0	0	0	0	43	2	0
.........................................................T----AAC-------------------------------------------------------------------------------------TCCGCGCGGAGATATG..................................................................................................................................................................................................................................................................	20	2	11.00	22	0	21	1	0	0	0	0	0	0	0
..................................................AACGTCAT----AAC-------------------------------------------------------------------------------------TCCGCGCGG.........................................................................................................................................................................................................................................................................	20	2	10.50	21	0	17	0	0	0	0	0	4	0	0
........................................................................................................................................................................GTTTGTGGAACGGCGGAGAT............................................................................................................................................................................................................................................	20	3	10.00	30	0	16	0	0	0	0	0	13	1	0
.......................................................................................................................................................................CGTTTGTGGAACGGCGGA...............................................................................................................................................................................................................................................	18	3	9.67	29	0	18	0	0	0	1	0	10	0	0
................................................................................................................................................................GATATGTCGTTTGTGGAAC.....................................................................................................................................................................................................................................................	19	3	9.67	29	0	10	0	0	0	1	0	18	0	0
..........................................................................................................................................................CGCGGAGATATGTCGTTTGTGG........................................................................................................................................................................................................................................................	22	5	8.20	41	0	6	0	0	0	0	0	35	0	0
.......................................................................................................................................................................CGTTTGTGGAACGGCGGAGT.............................................................................................................................................................................................................................................	20	3	7.33	22	0	14	0	0	0	1	1	4	2	0
.............................................................................................................................................................GGAGATATGTCGTTTGTGGAG......................................................................................................................................................................................................................................................	21	6	7.33	44	0	2	0	0	0	0	0	41	1	0
...............................................................................................................................................................AGATATGTCGTTTGTGGAACGGTT.................................................................................................................................................................................................................................................	24	3	7.00	21	0	0	0	0	0	0	0	20	1	0
..............................................................................................................................................................GAGATATGTCGTTTGTGGA.......................................................................................................................................................................................................................................................	19	6	6.83	41	0	8	0	0	0	0	0	28	5	0
.................................................................................................................................................................ATATGTCGTTTGTGGAACG....................................................................................................................................................................................................................................................	19	3	6.33	19	0	7	0	0	0	0	0	12	0	0
..................................................................................................................................................................TATGTCGTTTGTGGAACGGC..................................................................................................................................................................................................................................................	20	3	6.00	18	0	13	0	0	0	0	0	5	0	0
........................................................................................................................................................................GTTTGTGGAACGGCGGAGATA...........................................................................................................................................................................................................................................	21	3	5.67	17	0	8	0	0	0	0	0	9	0	0
..........ATATGTCGTCT--------------------------CAAAACGTCA...............................................................................................................................................................................................................................................................................................................................................................................	21	2	5.50	11	0	5	0	0	0	0	0	6	0	0
................................................AAAACGTCAT----AAC-------------------------------------------------------------------------------------TCCGCGCC..........................................................................................................................................................................................................................................................................	21	2	5.50	11	0	4	0	0	0	0	0	7	0	0
...................................................ACGTCAT----AAC-------------------------------------------------------------------------------------TCCGCGCGGA........................................................................................................................................................................................................................................................................	20	2	5.50	11	0	11	0	0	0	0	0	0	0	0
..............................................................................................................................................................GAGATATGTCGTTTGTGGAACT....................................................................................................................................................................................................................................................	22	3	5.33	16	0	0	0	0	0	0	0	14	2	0
........................................................................................................................................................................GTTTGTGGAACGGCGGAG..............................................................................................................................................................................................................................................	18	3	5.33	16	0	6	0	0	0	0	0	8	2	0
.......................................................................................................................................................................CGTTTGTGGAACGGCGGAGATT...........................................................................................................................................................................................................................................	22	3	5.00	15	0	5	0	0	0	0	0	10	0	0
.......................................................................................................................................................................CGTTTGTGGAACGGCGGAGAC............................................................................................................................................................................................................................................	21	3	4.67	14	0	0	0	0	0	0	0	14	0	0
............................................................................................................................................................CGGAGATATGTCGTTTGTGG........................................................................................................................................................................................................................................................	20	6	4.67	28	0	5	0	0	0	0	0	15	8	0
.............................................................................................................................................................GGAGATATGTCGTTTGTGG........................................................................................................................................................................................................................................................	19	6	4.50	27	0	3	0	0	0	0	0	11	13	0
........AGATATGTCGTCT--------------------------CAAAACGTC................................................................................................................................................................................................................................................................................................................................................................................	22	2	4.50	9	0	6	0	0	0	0	1	2	0	0
................................................................................................................................................................GATATGTCGTTTGTGGAACGGT..................................................................................................................................................................................................................................................	22	3	4.33	13	0	0	0	0	0	0	0	11	2	0
..............................................................................................................................................................GAGATATGTCGTTTGTGGAACC....................................................................................................................................................................................................................................................	22	3	4.33	13	0	1	0	0	0	0	0	11	1	0
........................................................................................................................................................................GTTTGTGGAACGGCGGAGATT...........................................................................................................................................................................................................................................	21	3	4.33	13	0	10	0	0	0	0	0	2	1	0
...............................................................................................................................................................AGATATGTCGTTTGTGGA.......................................................................................................................................................................................................................................................	18	6	4.33	26	0	7	0	0	0	0	0	17	2	0
...................................................ACGTCAT----AAC-------------------------------------------------------------------------------------TCCGCGCGGAG.......................................................................................................................................................................................................................................................................	21	2	4.00	8	0	4	0	0	0	0	0	4	0	0
..............................................................................................................................................................GAGATATGTCGTTTGTGGAACGGC..................................................................................................................................................................................................................................................	24	3	4.00	12	0	1	0	0	0	0	0	10	1	0
...............................................CAAAACGTCAT----AAC-------------------------------------------------------------------------------------TCCGCGC...........................................................................................................................................................................................................................................................................	21	2	4.00	8	0	2	0	0	0	0	0	5	1	0
..................................................................................................................................................................TATGTCGTTTGTGGAACGG...................................................................................................................................................................................................................................................	19	3	3.67	11	0	3	0	0	0	0	0	8	0	0
..............................................................................................................................................................GAGATATGTCGTTTGTGGAACA....................................................................................................................................................................................................................................................	22	3	3.67	11	0	0	0	0	0	0	0	11	0	0
.........................................................T----AAC-------------------------------------------------------------------------------------TCCGCGCGGAGATATGT.................................................................................................................................................................................................................................................................	21	2	3.50	7	0	3	0	0	0	0	0	4	0	0
..........ATATGTCGTCT--------------------------CAAAACGTCAT----..........................................................................................................................................................................................................................................................................................................................................................................	22	2	3.50	7	0	3	0	0	0	0	0	4	0	0
.................................................AAACGTCAT----AAC-------------------------------------------------------------------------------------TCCGCGCGGT........................................................................................................................................................................................................................................................................	22	2	3.50	7	0	4	0	0	0	0	0	3	0	0
..................................................AACGTCAT----AAC-------------------------------------------------------------------------------------TCCGCGCGGTT.......................................................................................................................................................................................................................................................................	22	2	3.50	7	0	5	0	0	0	0	0	2	0	0
.................................................AAACGTCAT----AAC-------------------------------------------------------------------------------------TCCGCGCGC.........................................................................................................................................................................................................................................................................	21	2	3.50	7	0	4	0	0	0	0	0	3	0	0
..................................................................................................................................................................TATGTCGTTTGTGGAACGGCGT................................................................................................................................................................................................................................................	22	3	3.33	10	0	0	0	0	0	0	0	10	0	0
...............................................................................................................................................................AGATATGTCGTTTGTGGAACT....................................................................................................................................................................................................................................................	21	3	3.33	10	0	2	0	0	0	0	0	7	1	0
..............................................................................................................................................................GAGATATGTCGTTTGTGG........................................................................................................................................................................................................................................................	18	6	3.33	20	0	3	0	0	0	0	0	17	0	0
.................................................AAACGTCAT----AAC-------------------------------------------------------------------------------------TCCGCGCG..........................................................................................................................................................................................................................................................................	20	2	3.00	6	0	6	0	0	0	0	0	0	0	0
.................................................AAACGTCAT----AAC-------------------------------------------------------------------------------------TCCGCGCGT.........................................................................................................................................................................................................................................................................	21	2	3.00	6	0	6	0	0	0	0	0	0	0	0
........AGATATGTCGTCT--------------------------CAAAACGT.................................................................................................................................................................................................................................................................................................................................................................................	21	2	3.00	6	0	5	0	0	0	0	1	0	0	0
...............................................................................................................................................................AGATATGTCGTTTGTGGAACGTT..................................................................................................................................................................................................................................................	23	3	3.00	9	0	0	0	0	0	0	0	9	0	0
...................................................................................................................................................................ATGTCGTTTGTGGAACGGCGG................................................................................................................................................................................................................................................	21	3	2.67	8	0	5	0	0	0	0	0	3	0	0
.............................................................................................................................................................GGAGATATGTCGTTTGTGGAAT.....................................................................................................................................................................................................................................................	22	3	2.67	8	0	0	0	0	0	0	0	8	0	0
.........................................................T----AAC-------------------------------------------------------------------------------------TCCGCGCGGAGATATGTC................................................................................................................................................................................................................................................................	22	2	2.50	5	0	4	0	0	0	0	1	0	0	0
................................................AAAACGTCAT----AAC-------------------------------------------------------------------------------------TCCGCGCT..........................................................................................................................................................................................................................................................................	21	2	2.50	5	0	3	0	0	0	0	0	2	0	0
...............................................................AC-------------------------------------------------------------------------------------TCCGCGCGGAGATATGTCGT..............................................................................................................................................................................................................................................................	22	2	2.50	5	0	5	0	0	0	0	0	0	0	0
....................................................CGTCAT----AAC-------------------------------------------------------------------------------------TCCGCGCGGAG.......................................................................................................................................................................................................................................................................	20	2	2.50	5	0	5	0	0	0	0	0	0	0	0
.................................................................................................................................................................ATATGTCGTTTGTGGAACGT...................................................................................................................................................................................................................................................	20	3	2.33	7	0	0	0	0	0	0	0	7	0	0
....................................................................................................................................................................TGTCGTTTGTGGAACGGCGG................................................................................................................................................................................................................................................	20	3	2.33	7	0	7	0	0	0	0	0	0	0	0
..............................................................................................................................................................GAGATATGTCGTTTGTGGAAA.....................................................................................................................................................................................................................................................	21	3	2.33	7	0	0	0	0	0	0	0	5	2	0
....................................................................................................................................................................................................TCAAAACGTCAT---------------------------------------------------------ATCTCCGC-----------------------GCGG............................................................................................................................	24	4	2.00	8	0	8	0	0	0	0	0	0	0	0
......................................................................................................................................................................TCGTTTGTGGAACGGCGGAGAT............................................................................................................................................................................................................................................	22	3	2.00	6	0	3	0	0	0	0	0	3	0	0
..............................................................................................................................................................GAGATATGTCGTTTGTGGAACGGA..................................................................................................................................................................................................................................................	24	3	2.00	6	0	0	0	0	0	0	0	6	0	0
....................................................CGTCAT----AAC-------------------------------------------------------------------------------------TCCGCGCGGAGA......................................................................................................................................................................................................................................................................	21	2	2.00	4	0	4	0	0	0	0	0	0	0	0
.......................................................................................................................................................CCGCGCGGAGATATGTCGTTT............................................................................................................................................................................................................................................................	21	14	2.00	28	0	26	0	0	0	0	2	0	0	0
.........GATATGTCGTCT--------------------------CAAAACGTC................................................................................................................................................................................................................................................................................................................................................................................	21	2	2.00	4	0	4	0	0	0	0	0	0	0	0
.........................................................................................................................................................................TTTGTGGAACGGCGGAGATA...........................................................................................................................................................................................................................................	20	3	2.00	6	0	5	0	0	0	0	0	1	0	0
...................................................ACGTCAT----AAC-------------------------------------------------------------------------------------TCCGCGCGG.........................................................................................................................................................................................................................................................................	19	2	2.00	4	0	4	0	0	0	0	0	0	0	0
.......................................................................................................................................................................CGTTTGTGGAACGGCGGT...............................................................................................................................................................................................................................................	18	3	2.00	6	0	5	0	0	0	0	0	1	0	0
...............................................................................................................................................................AGATATGTCGTTTGTGGAACA....................................................................................................................................................................................................................................................	21	3	2.00	6	0	0	0	0	0	0	0	6	0	0
..................................................AACGTCAT----AAC-------------------------------------------------------------------------------------TCCGCGCGGT........................................................................................................................................................................................................................................................................	21	2	2.00	4	0	3	0	0	0	0	0	1	0	0
.......................................................................................................................................................................CGTTTGTGGAACGGCGGAGATAAAA........................................................................................................................................................................................................................................	25	3	2.00	6	0	0	0	0	0	0	0	6	0	0
.............................................................................................................................................................GGAGATATGTCGTTTGTGGAC......................................................................................................................................................................................................................................................	21	6	1.83	11	0	0	0	0	0	0	0	11	0	0
........................................................................................................................................................................GTTTGTGGAACGGCGGAGT.............................................................................................................................................................................................................................................	19	3	1.67	5	0	5	0	0	0	0	0	0	0	0
........................................................................................................................................................................GTTTGTGGAACGGCGGA...............................................................................................................................................................................................................................................	17	3	1.67	5	0	0	0	0	0	0	0	5	0	0
................................................................................................................................................................GATATGTCGTTTGTGGAA......................................................................................................................................................................................................................................................	18	3	1.67	5	0	2	0	0	0	0	0	2	1	0
................................................................................................................................................................GATATGTCGTTTGTGGAACGGTT.................................................................................................................................................................................................................................................	23	3	1.67	5	0	1	0	0	0	0	0	4	0	0
..............................................................................................................................................................GAGATATGTCGTTTGTGGAACGGTT.................................................................................................................................................................................................................................................	25	3	1.67	5	0	0	0	0	0	0	0	5	0	0
..............................................................................................................................................................GAGATATGTCGTTTGTGGAACGGCGGAG..............................................................................................................................................................................................................................................	28	3	1.67	5	0	0	0	0	0	0	0	5	0	0
....................................................CGTCAT----AAC-------------------------------------------------------------------------------------TCCGCGCGGA........................................................................................................................................................................................................................................................................	19	2	1.50	3	0	3	0	0	0	0	0	0	0	0
...............................................................AC-------------------------------------------------------------------------------------TCCGCGCGGAGATATGTC................................................................................................................................................................................................................................................................	20	2	1.50	3	0	3	0	0	0	0	0	0	0	0
.......................................................................................................................................................................CGTTTGTGGAACGGCGGAGATAA..........................................................................................................................................................................................................................................	23	3	1.33	4	0	0	0	0	0	0	0	4	0	0
..............................................................................................................................................................GAGATATGTCGTTTGTGGAACGCTC.................................................................................................................................................................................................................................................	25	3	1.33	4	0	0	0	0	0	0	0	4	0	0
.........................................................................................................................................................................TTTGTGGAACGGCGGAGAT............................................................................................................................................................................................................................................	19	3	1.33	4	0	2	0	0	0	0	0	2	0	0
......................................................................................................................................................................TCGTTTGTGGAACGGCGGAGAC............................................................................................................................................................................................................................................	22	3	1.33	4	0	0	0	0	0	0	0	4	0	0
.................................................................................................................................................................ATATGTCGTTTGTGGAAC.....................................................................................................................................................................................................................................................	18	3	1.33	4	0	3	0	0	0	0	0	0	1	0
...............................................................................................................................................................AGATATGTCGTTTGTGG........................................................................................................................................................................................................................................................	17	6	1.33	8	0	0	0	0	0	0	0	8	0	0
.....................................................................................................................................................................GTCGTTTGTGGAACGGCGGAG..............................................................................................................................................................................................................................................	21	3	1.33	4	0	2	0	0	0	0	0	2	0	0
..............................................................................................................................................................GAGATATGTCGTTTGTGGAACGT...................................................................................................................................................................................................................................................	23	3	1.33	4	0	0	0	0	0	0	0	4	0	0
...............................................................................................................................................................AGATATGTCGTTTGTGGAACGGA..................................................................................................................................................................................................................................................	23	3	1.33	4	0	1	0	0	0	0	0	3	0	0
..............................................................................................................................................................GAGATATGTCGTTTGTGGAACGC...................................................................................................................................................................................................................................................	23	3	1.33	4	0	0	0	0	0	0	0	4	0	0
...............................................................................................................................................................AGATATGTCGTTTGTGGAAA.....................................................................................................................................................................................................................................................	20	3	1.33	4	0	1	0	0	0	0	0	2	1	0
.......................................................................................................................................................................CGTTTGTGGAACGGCGGAGAA............................................................................................................................................................................................................................................	21	3	1.33	4	0	3	0	0	0	0	0	1	0	0
......................................................................................................................................................................TCGTTTGTGGAACGGCGG................................................................................................................................................................................................................................................	18	3	1.33	4	0	3	0	0	0	0	0	0	1	0
................................................................................................................................................................GATATGTCGTTTGTGGAACGGC..................................................................................................................................................................................................................................................	22	3	1.33	4	0	1	0	0	0	0	0	2	0	1
...............................................................................................................................................................AGATATGTCGTTTGTGGAG......................................................................................................................................................................................................................................................	19	6	1.17	7	0	0	0	0	0	0	0	7	0	0
..........................................................................................................................................................CGCGGAGATATGTCGTTTGTG.........................................................................................................................................................................................................................................................	21	13	1.08	14	0	4	0	0	0	0	1	9	0	0
......................................................................................................................................................TCCGCGCGGAGATATGTCGTT.............................................................................................................................................................................................................................................................	21	14	1.00	14	0	12	0	0	0	0	1	1	0	0
..............................................................................................................................................................GAGATATGTCGTTTGTGGAACTA...................................................................................................................................................................................................................................................	23	3	1.00	3	0	0	0	0	0	0	0	3	0	0
.................................................................................................................................................................ATATGTCGTTTGTGGAACGTT..................................................................................................................................................................................................................................................	21	3	1.00	3	0	0	0	0	0	0	0	1	2	0
.....................................................GTCAT----AAC-------------------------------------------------------------------------------------TCCGCGCGGAG.......................................................................................................................................................................................................................................................................	19	2	1.00	2	0	2	0	0	0	0	0	0	0	0
...CGCGGAGATATGTCGTCT--------------------------CAAAACG..................................................................................................................................................................................................................................................................................................................................................................................	25	2	1.00	2	0	2	0	0	0	0	0	0	0	0
................................................................................................................................................................GATATGTCGTTTGTGGAACGT...................................................................................................................................................................................................................................................	21	3	1.00	3	0	0	0	0	0	0	0	1	2	0
........................................................................................................................................................................GTTTGTGGAACGGCGGAGAA............................................................................................................................................................................................................................................	20	3	1.00	3	0	3	0	0	0	0	0	0	0	0
......................................................................................................................................................................TCGTTTGTGGAACGGCGGT...............................................................................................................................................................................................................................................	19	3	1.00	3	0	0	0	0	0	0	0	3	0	0
...............................................................................................................................................................AGATATGTCGTTTGTGGAACGGTA.................................................................................................................................................................................................................................................	24	3	1.00	3	0	0	0	0	0	0	0	3	0	0
.........................................................................................................................................................................TTTGTGGAACGGCGGAGA.............................................................................................................................................................................................................................................	18	3	1.00	3	0	3	0	0	0	0	0	0	0	0
................................................AAAACGTCAT----AAC-------------------------------------------------------------------------------------TCCGCGC...........................................................................................................................................................................................................................................................................	20	2	1.00	2	0	1	0	0	0	0	0	1	0	0
............................................................................................................................................................CGGAGATATGTCGTTTGTGGAA......................................................................................................................................................................................................................................................	22	3	1.00	3	0	0	0	0	0	0	0	3	0	0
..................................................AACGTCAT----AAC-------------------------------------------------------------------------------------TCCGCGCG..........................................................................................................................................................................................................................................................................	19	2	1.00	2	0	2	0	0	0	0	0	0	0	0
.............................................................................................................................................................GGAGATATGTCGTTTGTGGAAG.....................................................................................................................................................................................................................................................	22	3	1.00	3	0	0	0	0	0	0	0	3	0	0
..........ATATGTCGTCT--------------------------CAAAACGT.................................................................................................................................................................................................................................................................................................................................................................................	19	2	1.00	2	0	0	0	0	0	0	0	2	0	0
...............................................................................................................................................................AGATATGTCGTTTGTGGAACTC...................................................................................................................................................................................................................................................	22	3	1.00	3	0	0	0	0	0	0	0	3	0	0
...................................................................................................................................................................................................TTCAAAACGTCAT---------------------------------------------------------ATCTCCGC-----------------------G...............................................................................................................................	22	4	1.00	4	0	4	0	0	0	0	0	0	0	0
..................................................AACGTCAT----AAC-------------------------------------------------------------------------------------TCCGCGCGGTTT......................................................................................................................................................................................................................................................................	23	2	1.00	2	0	2	0	0	0	0	0	0	0	0
..........................................................................................................................................................................TTGTGGAACGGCGGAGATATGTAA......................................................................................................................................................................................................................................	24	3	1.00	3	0	0	0	0	0	0	0	3	0	0
.........................................................................................................................................................................TTTGTGGAACGGCGGAGATAT..........................................................................................................................................................................................................................................	21	3	1.00	3	0	2	0	0	0	0	0	1	0	0
.............................................................................................................................................................GGAGATATGTCGTTTGTGGAACG....................................................................................................................................................................................................................................................	23	3	1.00	3	0	0	0	0	0	0	0	0	3	0
.............................................................................................................................................................GGAGATATGTCGTTTGTGGAACA....................................................................................................................................................................................................................................................	23	3	1.00	3	0	0	0	0	0	0	0	2	1	0
........AGATATGTCGTCT--------------------------CAAAACGTT................................................................................................................................................................................................................................................................................................................................................................................	22	2	1.00	2	0	2	0	0	0	0	0	0	0	0
...................................................ACGTCAT----AAC-------------------------------------------------------------------------------------TCCGCGCG..........................................................................................................................................................................................................................................................................	18	2	1.00	2	0	2	0	0	0	0	0	0	0	0
..............................................................AAC-------------------------------------------------------------------------------------TCCGCGCGGAGATATGTC................................................................................................................................................................................................................................................................	21	2	1.00	2	0	2	0	0	0	0	0	0	0	0
.......................................................................................................................................................................CGTTTGTGGAACGGCGGAGG.............................................................................................................................................................................................................................................	20	3	1.00	3	0	0	0	0	0	0	0	3	0	0
.........................................................T----AAC-------------------------------------------------------------------------------------TCCGCGCGGAGATATGTCGTT.............................................................................................................................................................................................................................................................	25	2	1.00	2	0	2	0	0	0	0	0	0	0	0
...............................................CAAAACGTCAT----AAC-------------------------------------------------------------------------------------TCCGCGCG..........................................................................................................................................................................................................................................................................	22	2	1.00	2	0	2	0	0	0	0	0	0	0	0
.............................................................................................................................................................GGAGATATGTCGTTTGTGGAACGGCG.................................................................................................................................................................................................................................................	26	3	1.00	3	0	0	0	0	0	0	0	0	3	0
......................................................................................................................................................................TCGTTTGTGGAACGGCGGAGT.............................................................................................................................................................................................................................................	21	3	1.00	3	0	1	0	0	0	0	0	1	1	0
..............................................................AAC-------------------------------------------------------------------------------------TCCGCGCGGAGATATG..................................................................................................................................................................................................................................................................	19	2	1.00	2	0	2	0	0	0	0	0	0	0	0
..........................................................................................................................................................CGCGGAGATATGTCGTTTGTGGAACGGC..................................................................................................................................................................................................................................................	28	3	1.00	3	0	0	0	0	0	0	0	1	2	0
..................................................AACGTCAT----AAC-------------------------------------------------------------------------------------TCCGCGCGGTA.......................................................................................................................................................................................................................................................................	22	2	1.00	2	0	2	0	0	0	0	0	0	0	0
..............................................................................................................................................................GAGATATGTCGTTTGTGGAACTC...................................................................................................................................................................................................................................................	23	3	1.00	3	0	0	0	0	0	0	0	3	0	0
.............TGTCGTCT--------------------------CAAAACGTCAT----AAC-------------------------------------------------------------------------------------T.................................................................................................................................................................................................................................................................................	23	2	1.00	2	0	2	0	0	0	0	0	0	0	0
.................................................AAACGTCAT----AAC-------------------------------------------------------------------------------------TCCGCGCC..........................................................................................................................................................................................................................................................................	20	2	1.00	2	0	2	0	0	0	0	0	0	0	0
....................................................................................................................................................................TGTCGTTTGTGGAACGGCGGA...............................................................................................................................................................................................................................................	21	3	1.00	3	0	1	0	0	0	0	0	2	0	0
..................................................................................................................................................................................................TTTCAAAACGTCAT---------------------------------------------------------ATCTCCGC-----------------------AT..............................................................................................................................	24	4	0.75	3	0	0	0	0	0	0	0	3	0	0
.......................................................................................................................................................................................................AAACGTCAT---------------------------------------------------------ATCTCCGC-----------------------GCGG............................................................................................................................	21	4	0.75	3	0	3	0	0	0	0	0	0	0	0
.............................................................................................................................................................GGAGATATGTCGTTTGTGGAACGGCGG................................................................................................................................................................................................................................................	27	3	0.67	2	0	0	0	0	0	0	0	2	0	0
.................................................................................................................................................................ATATGTCGTTTGTGGAACGGT..................................................................................................................................................................................................................................................	21	3	0.67	2	0	0	0	0	0	0	0	2	0	0
.............................................................................................................................................................GGAGATATGTCGTTTGTGGAGT.....................................................................................................................................................................................................................................................	22	6	0.67	4	0	0	0	0	0	0	0	3	1	0
..................................................................................................................................................................TATGTCGTTTGTGGAACGGCGGA...............................................................................................................................................................................................................................................	23	3	0.67	2	0	0	0	0	0	0	0	2	0	0
..................................................................................................................................................................TATGTCGTTTGTGGAACGGCG.................................................................................................................................................................................................................................................	21	3	0.67	2	0	1	0	0	0	0	0	1	0	0
...............................................................................................................................................................AGATATGTCGTTTGTGGAACCA...................................................................................................................................................................................................................................................	22	3	0.67	2	0	0	0	0	0	0	0	2	0	0
..............................................................................................................................................................GAGATATGTCGTTTGTGGAACGA...................................................................................................................................................................................................................................................	23	3	0.67	2	0	0	0	0	0	0	0	0	2	0
...............................................................................................................................................................AGATATGTCGTTTGTGGAACGA...................................................................................................................................................................................................................................................	22	3	0.67	2	0	0	0	0	0	0	0	2	0	0
......................................................................................................................................................................TCGTTTGTGGAACGGCGGAGG.............................................................................................................................................................................................................................................	21	3	0.67	2	0	0	0	0	0	0	0	2	0	0
.......................................................................................................................................................................CGTTTGTGGAACGGCGGAGC.............................................................................................................................................................................................................................................	20	3	0.67	2	0	0	0	0	0	0	0	2	0	0
.............................................................................................................................................................GGAGATATGTCGTTTGTGGAATT....................................................................................................................................................................................................................................................	23	3	0.67	2	0	0	0	0	0	0	0	0	2	0
........................................................................................................................................................................GTTTGTGGAACGGCGGAGGA............................................................................................................................................................................................................................................	20	3	0.67	2	0	0	0	0	0	0	0	2	0	0
............................................................................................................................................................................GTGGAACGGCGGAGATATGTC.......................................................................................................................................................................................................................................	21	3	0.67	2	0	2	0	0	0	0	0	0	0	0
..........................................................................................................................................................................TTGTGGAACGGCGGAGATA...........................................................................................................................................................................................................................................	19	3	0.67	2	0	2	0	0	0	0	0	0	0	0
...............................................................................................................................................................AGATATGTCGTTTGTGGAACGGAAA................................................................................................................................................................................................................................................	25	3	0.67	2	0	0	0	0	0	0	0	2	0	0
...........................................................................................................................................................................TGTGGAACGGCGGAGATATGT........................................................................................................................................................................................................................................	21	3	0.67	2	0	0	0	0	0	0	0	2	0	0
.............................................................................................................................................................GGAGATATGTCGTTTGTGGAACGGC..................................................................................................................................................................................................................................................	25	3	0.67	2	0	0	0	0	0	0	0	0	2	0
........................................................................................................................................................................GTTTGTGGAACGGCGGAA..............................................................................................................................................................................................................................................	18	3	0.67	2	0	2	0	0	0	0	0	0	0	0
..............................................................................................................................................................GAGATATGTCGTTTGTGGAG......................................................................................................................................................................................................................................................	20	6	0.67	4	0	0	0	0	0	0	0	1	3	0
...............................................................................................................................................................AGATATGTCGTTTGTGGAACGGC..................................................................................................................................................................................................................................................	23	3	0.67	2	0	1	0	0	0	0	0	1	0	0
...........................................................................................................................................................GCGGAGATATGTCGTTTGTG.........................................................................................................................................................................................................................................................	20	13	0.54	7	0	4	0	0	0	0	0	2	1	0
.........................................................T----AAC-------------------------------------------------------------------------------------TCCGCGCGGAGATATGTCGTTTG...........................................................................................................................................................................................................................................................	27	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..................................................AACGTCAT----AAC-------------------------------------------------------------------------------------TCCGCGCGGAG.......................................................................................................................................................................................................................................................................	22	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..................................................AACGTCAT----AAC-------------------------------------------------------------------------------------TCCGCGCGGTC.......................................................................................................................................................................................................................................................................	22	2	0.50	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................TCAAAACGTCAT---------------------------------------------------------ATCTCCGC-----------------------GCGGA---------------------------------------------------------------------------------------------------------------------------	25	4	0.50	2	0	2	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................CAAAACGTCAT---------------------------------------------------------ATCTCCGC-----------------------GCGG............................................................................................................................	23	4	0.50	2	0	2	0	0	0	0	0	0	0	0
...CGCGGAGATATGTCGTCT--------------------------CAAAACGTC................................................................................................................................................................................................................................................................................................................................................................................	27	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...............TCGTCT--------------------------CAAAACGTCAT----AAC-------------------------------------------------------------------------------------TCCGCGC...........................................................................................................................................................................................................................................................................	27	2	0.50	1	0	1	0	0	0	0	0	0	0	0
................................................................C-------------------------------------------------------------------------------------TCCGCGCGGAGATATGTCGT..............................................................................................................................................................................................................................................................	21	16	0.50	8	0	7	0	0	0	0	0	1	0	0
............................................................................................................................................................................GTGGAACGGCGGAGATATGTCGTT....................................................................................................................................................................................................................................	24	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................TGTGGAACGGCGGAGATATGTCGTT....................................................................................................................................................................................................................................	25	2	0.50	1	0	0	0	0	0	0	1	0	0	0
.........GATATGTCGTCT--------------------------CAAAACGT.................................................................................................................................................................................................................................................................................................................................................................................	20	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..................................................AACGTCAT----AAC-------------------------------------------------------------------------------------TCCGCGCGT.........................................................................................................................................................................................................................................................................	20	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.........................................................T----AAC-------------------------------------------------------------------------------------TCCGCGCGGAGATATGTCT...............................................................................................................................................................................................................................................................	23	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..................................................AACGTCAT----AAC-------------------------------------------------------------------------------------TCCGCGCGGAC.......................................................................................................................................................................................................................................................................	22	2	0.50	1	0	1	0	0	0	0	0	0	0	0

droPer2

CCGCGCGAAGATATGACGTTT--------------------------TGAAACGACAT----ATCTCCGCCGTTCC--------------------------ACAAACGA----------------------------------CATATCTCTGCGCGG-------------------------AGCTATGACGTTTTGAGACGACAT---------------------------------------------------------ATCTCCGA-----------------------GCGGA-----------------------------------------------------------------------------------AGTATGTCG--CTTTAAAATTACATAATT-----------	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
No Reads

droAna3

AA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-TTATATGTAGACTTCTATAATACCCAC---GCAGATCAAGTTTCTTT--TTTATTTT--------TTTGCCGGGCTCC	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
..............................................................................................................................................................................................................................................................................................................................................................................TACCCAC---GCAGATCAAGTTTCTTT--TTTAA........................	29	1	1.00	1	1	0	0	0	0	0

droBip1

ATTT----------AACATTC--------------------------CGAAG--TAAT----C-------------------------------------------------------------------------------------A--------------------------------------------TTGATATAGCCATGT---------------------------------------------------------CCGTCCGT-----------------------CCGA-----------------GACTATAAGAGCTATAGCTATA-AGATT-TGGGATAGGGACTCCTATAGGACCCAC---GCAGTGGAAGTTTGTTT--C----------------------------	Size	Hit Count	Total Norm	Total
No Reads

droKik1

CCGCGCGGAGCTATGTCGCTT--------------------------TAAAGCGACAT----ATCTCCGCCGAACT--------------------------ACAAACGA----------------------------------CATATCTCCGCGCGG-------------------------AGTTATGTCGTTTGCAAGCGACAT---------------------------------------------------------ATCTCCGCCAAACTACTAACGACATACAGTGGCGAACTTAATTTTTGCCACC-GTTT-------------TTCT-TCATT-TAACATAGAA---------ATATTTAC---TTGAATCAAATTTGATT--TAAATATT--------TT-GATCAATTTC	Size	Hit Count	Total Norm	Total
No Reads

droEle1

TTATTTTAATTTCTG------------------------------------GCGTAAT----T-------------------------------------------------------------------------------------TTTCCGTCTTT-------------------------AGATTTGTCGTTTCAAAA-------------------------------------------------------------------------------------------------------------------GACTCCGAGTTCAAAAGATTTCGAAACTCTTTGGTATGGGTTC---------------------------------------------CAGC-----------TGTA	Size	Hit Count	Total Norm	Total
No Reads

droRho1

CCGCGCGAAATTATTTCGTTT--------------------------TTAAAGGTCCT----ATC-------------------------------------------------------------------------------------TCCGCCCGGAGATGTGTCGTTTGCAGAAGCGCGGAGATATGCCGTTTTGAGACGACAT---------------------------------------------------------AACTCCC---------------------------------------------------------------------------------------------------CC---GCTGATCAACGC-----------------GGAG-----------TTAT	Size	Hit Count	Total Norm	Total
No Reads

droBia1

CCGCGCGGAGTTATGTCGCTTT-------------------------TAAAACGACATATGTATCTCCGCTGACCA--------------------------AAAAGCGA----------------------------------CATATTTCCGCGCGG-------------------------AGATATGACGTTTCAAGACGACAT---------------------------------------------------------ATCTCCGC-----------------------GCGGA------------------------------------------------------------------------------------------------------------------------GTA	Size	Hit Count	Total Norm	Total
No Reads

droTak1

TCGCGCGGAGATATGTCGTTT--------------------------TTAAACGTCAT----ATC-------------------------------------------------------------------------------------TCCGCGCGGAGATAAGTCGTTTGTAGAAGGGCGGAGCTCTGCGTTTTTAAAACGACAT---------------------------------------------------------ATCTCCCC-----------------------GCGAA-----------------GTTTTAAAAGCTACAAAGTTT-TTTTT-TTATAT------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droEug1

CGGAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATAAGCGATAGAAAGTTC-GAATT-TAGCATGTAGGTTTTCATGATGCTCCCAATGCGAATTCTTTTTTTTC--CGATTAAGCCATAG-----------TTTA	Size	Hit Count	Total Norm	Total
No Reads

droYak3

TCGCGAGGACACATTTCGTTA--------------------------C-------------------CCCCTACCAATTATCCAAA----------------------------------------------------------AATCATTCTGGATGGAGA-------------------------------------AAACGAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Size

Hit Count

Total Norm

Total

M026
Head

M043
Female-body

M056
Embryo

V046
Embryo

V052
Head

V058
Head

V120
Male-body

SRR1275488
Male larvae

SRR1275486
Male prepupae

SRR1275484
Male prepupae

GSM1528802
follicle cells

No Reads

droEre2

CCGCGCGGAGATATGTCGTTTTTAGTTTGACGGAAATATATCGTTTTTAAAGCGACAT----AAC-------------------------------------------------------------------------------------TCCACCA------------------------------------------ATAAGAAA-AGGACGGAGATATGTCGAGTTTAGTTCGCCGAGGATATGTCGATTCAAAAACGACATATTTCCGA-----------------------A---------------------AACCTATTAGCGACATACAAA-TTAAT-ATAAGTGTGG-------------------------------------------------------------------G	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
..........................................................................................................................................................................................................................TATGTCGAGTTTAGTTCGCCGAGGA.....................................................................................................................................................................................	25	1	437.00	437	49	0	0	0	3	0	385
......................................TATCGTTTTTAAAGCGACAT----AAC-------------------------------------------------------------------------------------TCC...............................................................................................................................................................................................................................................................................	26	1	355.00	355	2	0	0	0	0	0	353
..........................................................................................................................................................................................................................TATGTCGAGTTTAGTTCGCCGAGGATA...................................................................................................................................................................................	27	1	249.00	249	29	0	0	0	5	0	215
............................................................................................................................................................................................................................TGTCGAGTTTAGTTCGCCGAGGATA...................................................................................................................................................................................	25	1	85.00	85	13	0	0	0	0	0	72
....................................................................................................................................................................................................................................TTAGTTCGCCGAGGATATGTCGAT............................................................................................................................................................................	24	1	76.00	76	25	0	0	0	15	0	36
..........................................................................................................................................................................................................................TATGTCGAGTTTAGTTCGCCGAGGAT....................................................................................................................................................................................	26	1	76.00	76	7	0	0	0	0	0	69
........................................................................................................................................................................................................................................................................TATTTCCGA-----------------------A---------------------AACCTATTAGCGACA...........................................................................................	25	1	67.00	67	32	0	0	0	0	0	35
.....................TTAGTTTGACGGAAATATATCGTTTT.........................................................................................................................................................................................................................................................................................................................................................................................	26	1	64.00	64	4	0	0	0	1	0	59
........................................................................................................................................................................................................TAAGAAA-AGGACGGAGATATGTCGAGT....................................................................................................................................................................................................	27	1	47.00	47	20	0	0	0	4	0	23
......................................................................................................................................................TCCACCA------------------------------------------ATAAGAAA-AGGACGGAGA..............................................................................................................................................................................................................	25	1	46.00	46	33	0	0	0	4	0	9
....................................TATATCGTTTTTAAAGCGACAT----AAC-------------------------------------------------------------------------------------TCC...............................................................................................................................................................................................................................................................................	28	1	36.00	36	0	0	0	0	0	0	36
...............................................TAAAGCGACAT----AAC-------------------------------------------------------------------------------------TCCACCA------------------------------------------ATAAGA...........................................................................................................................................................................................................................	27	1	30.00	30	27	0	0	0	1	0	2
.....................................................................................................................................................................................................................................TAGTTCGCCGAGGATATGTCGAT............................................................................................................................................................................	23	1	25.00	25	9	0	0	0	0	0	16
..........................................................................................................................................................................................................................TATGTCGAGTTTAGTTCGCCGAGG......................................................................................................................................................................................	24	1	25.00	25	10	0	0	0	0	0	15
............................................................................................................................................................................................................................TGTCGAGTTTAGTTCGCCGAGGAT....................................................................................................................................................................................	24	1	24.00	24	0	0	0	0	0	0	24
.....................................................................................................................................................................................................................................TAGTTCGCCGAGGATATGTCGATT...........................................................................................................................................................................	24	1	23.00	23	3	0	0	0	0	0	20
.......................................ATCGTTTTTAAAGCGACAT----AAC-------------------------------------------------------------------------------------TCC...............................................................................................................................................................................................................................................................................	25	1	22.00	22	2	0	0	0	0	0	20
...............................................TAAAGCGACAT----AAC-------------------------------------------------------------------------------------TCCACCA------------------------------------------ATAAGAA..........................................................................................................................................................................................................................	28	1	20.00	20	16	0	0	0	1	0	3
...........................................................................................................................................................................................................................ATGTCGAGTTTAGTTCGCCGAGGA.....................................................................................................................................................................................	24	1	18.00	18	4	0	0	0	0	0	14
........................................................................................................................................................................................................................................TTCGCCGAGGATATGTCGATTCAAAAACGA..................................................................................................................................................................	30	1	16.00	16	0	0	0	0	0	0	16
....................................................................................................................................................................................................................................TTAGTTCGCCGAGGATATGTCGA.............................................................................................................................................................................	23	1	16.00	16	2	0	0	0	1	0	13
........................................................................................................................................................................................................................................................................TATTTCCGA-----------------------A---------------------AACCTATTAGCGACATAC........................................................................................	28	1	16.00	16	1	0	0	0	0	0	15
............................................................................................................................................................................................................................................................TCAAAAACGACATATTTCCGA-----------------------A---------------------AACC......................................................................................................	26	1	15.00	15	15	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................TCCGA-----------------------A---------------------AACCTATTAGCGACATACAAA-T...................................................................................	28	1	15.00	15	9	0	0	0	0	0	6
...CGCGGAGATATGTCGTTTTTAGTT.............................................................................................................................................................................................................................................................................................................................................................................................................	24	2	11.50	23	0	0	0	0	0	0	23
.CGCGCGGAGATATGTCGTTTTTAGTT.............................................................................................................................................................................................................................................................................................................................................................................................................	26	2	11.50	23	8	0	0	0	0	0	15
................................................................................................................................................................................................................................GAGTTTAGTTCGCCGAGGATATGTCGA.............................................................................................................................................................................	27	1	11.00	11	0	0	0	0	0	0	11
...................................................................................................................................................................................................................................TTTAGTTCGCCGAGGATATGTCGAT............................................................................................................................................................................	25	1	11.00	11	6	0	0	0	2	1	2
........................................................................................................................................................................................................................GATATGTCGAGTTTAGTTCGCCGAGGA.....................................................................................................................................................................................	27	1	11.00	11	2	0	0	0	1	0	8
.............................................TTTAAAGCGACAT----AAC-------------------------------------------------------------------------------------TCCACCA------------------------------------------ATAAGA...........................................................................................................................................................................................................................	29	1	10.00	10	8	0	0	0	0	0	2
.........................................................................................................................................................ACCA------------------------------------------ATAAGAAA-AGGACGGAGATATG..........................................................................................................................................................................................................	26	1	10.00	10	6	0	0	0	2	0	2
.........................................................T----AAC-------------------------------------------------------------------------------------TCCACCA------------------------------------------ATAAGAAA-AGGACGGA................................................................................................................................................................................................................	27	1	10.00	10	10	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................TTCAAAAACGACATATTTCCGA-----------------------A---------------------AACC......................................................................................................	27	1	9.00	9	9	0	0	0	0	0	0
........................................................................................................................................................................................................TAAGAAA-AGGACGGAGATATGTCGAGTTT..................................................................................................................................................................................................	29	1	9.00	9	0	0	0	0	0	0	9
.........................................................................................................................................................................................................AAGAAA-AGGACGGAGATATGTCGAGT....................................................................................................................................................................................................	26	1	9.00	9	1	0	0	0	1	0	7
.......................................................................................................................................................................................................ATAAGAAA-AGGACGGAGATATGTCG.......................................................................................................................................................................................................	25	1	9.00	9	0	0	0	0	0	0	9
..............................................TTAAAGCGACAT----AAC-------------------------------------------------------------------------------------TCCACCA------------------------------------------ATAAGA...........................................................................................................................................................................................................................	28	1	9.00	9	8	0	0	0	0	0	1
...........................................................................................................................................................................................................................................................................TTCCGA-----------------------A---------------------AACCTATTAGCGACATACA.......................................................................................	26	1	9.00	9	0	0	0	0	0	0	9
........................................................................................................................................................................................................................................TTCGCCGAGGATATGTCGATTCAAAAAC....................................................................................................................................................................	28	1	9.00	9	9	0	0	0	0	0	0
......................TAGTTTGACGGAAATATATCGTTTT.........................................................................................................................................................................................................................................................................................................................................................................................	25	1	9.00	9	1	0	0	0	2	0	6
.......................................................................................................................................................CCACCA------------------------------------------ATAAGAAA-AGGACGGAGA..............................................................................................................................................................................................................	24	1	9.00	9	9	0	0	0	0	0	0
.......................................................................................................................................................CCACCA------------------------------------------ATAAGAAA-AGGACGGAGATA............................................................................................................................................................................................................	26	1	8.00	8	1	0	0	0	0	0	7
..........................................................................................................................................................................................................................TATGTCGAGTTTAGTTCGCCGAG.......................................................................................................................................................................................	23	1	8.00	8	0	0	0	0	0	0	8
....................................................................................................................................................................................................................................TTAGTTCGCCGAGGATATGTCGATT...........................................................................................................................................................................	25	1	8.00	8	2	0	0	0	0	0	6
..............................................................................................................................................................................................................................TCGAGTTTAGTTCGCCGAGGATATGT................................................................................................................................................................................	26	1	8.00	8	0	0	0	0	0	0	8
....................TTTAGTTTGACGGAAATATATCGTTTT.........................................................................................................................................................................................................................................................................................................................................................................................	27	1	8.00	8	1	0	0	0	1	0	6
................................................AAAGCGACAT----AAC-------------------------------------------------------------------------------------TCCACCA------------------------------------------ATAAGA...........................................................................................................................................................................................................................	26	1	8.00	8	8	0	0	0	0	0	0
.............................................................................................................................................................................................................................GTCGAGTTTAGTTCGCCGAGGATA...................................................................................................................................................................................	24	1	8.00	8	1	0	0	0	0	0	7
.....................................................................................................................................................................................................................................................................................................................................TAGCGACATACAAA-TTAAT-ATAAGTGT......................................................................	27	1	8.00	8	5	0	0	0	0	0	3
.....................TTAGTTTGACGGAAATATATCGTT...........................................................................................................................................................................................................................................................................................................................................................................................	24	1	7.00	7	5	0	0	0	2	0	0
......................................................................................................................................................TCCACCA------------------------------------------ATAAGAAA-AGGACGGAGATA............................................................................................................................................................................................................	27	1	7.00	7	1	0	0	0	0	1	5
........................................................................................................................................................................................................TAAGAAA-AGGACGGAGATATGTCGAG.....................................................................................................................................................................................................	26	1	7.00	7	5	0	0	0	0	0	2
..................................................................................................................................................................................................................................GTTTAGTTCGCCGAGGATATG.................................................................................................................................................................................	21	1	7.00	7	0	0	0	0	0	0	7
.....................................................................................................................................................................................................................................................TGTCGATTCAAAAACGACATATTTCC.........................................................................................................................................................	26	2	6.50	13	0	0	0	0	0	0	13
........................................................................................................................................................CACCA------------------------------------------ATAAGAAA-AGGACGGAGA..............................................................................................................................................................................................................	23	1	6.00	6	3	0	0	0	0	0	3
..........................................................................................................................................................................................................................................CGCCGAGGATATGTCGATTCAAAAACGA..................................................................................................................................................................	28	1	6.00	6	2	0	0	0	0	0	4
........................................................................................................................................................................................................................................................................TATTTCCGA-----------------------A---------------------AACCTATTAGCGACATA.........................................................................................	27	1	6.00	6	1	0	0	0	0	0	5
..........................................................................................................................................................................................................................................................................TTTCCGA-----------------------A---------------------AACCTATTAGCGACATA.........................................................................................	25	1	6.00	6	0	0	0	0	0	0	6
...........................................................................................................................................................................................................................................................................TTCCGA-----------------------A---------------------AACCTATTAGCGACATA.........................................................................................	24	1	6.00	6	0	0	0	0	0	0	6
.CGCGCGGAGATATGTCGTTTTTAGT..............................................................................................................................................................................................................................................................................................................................................................................................................	25	2	6.00	12	3	0	0	0	1	0	8
...........................................................................................................................................................................................................................................................TTCAAAAACGACATATTTCCGA-----------------------A---------------------AACCTA....................................................................................................	29	1	6.00	6	6	0	0	0	0	0	0
..................TTTTTAGTTTGACGGAAATATATCGTTTT.........................................................................................................................................................................................................................................................................................................................................................................................	29	1	6.00	6	0	0	0	0	0	0	6
..........................................................................................................................................................................................................................TATGTCGAGTTTAGTTCGCCGAGGAA....................................................................................................................................................................................	26	1	6.00	6	0	0	0	0	0	0	6
.............................................TTTAAAGCGACAT----AAC-------------------------------------------------------------------------------------TCCACCA------------------------------------------A................................................................................................................................................................................................................................	24	1	6.00	6	6	0	0	0	0	0	0
............................................................................................................................................................................................................................TGTCGAGTTTAGTTCGCCGAGGATATG.................................................................................................................................................................................	27	1	6.00	6	6	0	0	0	0	0	0
...............................................................................................................................................................................................................................CGAGTTTAGTTCGCCGAGGATATG.................................................................................................................................................................................	24	1	6.00	6	1	0	0	0	0	0	5
....................................................................................................................................................................................................................................................................................................................................TTAGCGACATACAAA-TTAAT-ATAAGTG.......................................................................	27	1	6.00	6	4	0	0	0	0	0	2
......................................TATCGTTTTTAAAGCGACAT----AAC-------------------------------------------------------------------------------------TCCAC.............................................................................................................................................................................................................................................................................	28	1	5.00	5	4	0	0	0	0	0	1
..................................................................................................................................................................................................................................................................................................................................TATTAGCGACATACAAA-TTAAT-ATAAG.........................................................................	27	1	5.00	5	3	0	0	0	2	0	0
.............TGTCGTTTTTAGTTTGACGGAAATA..................................................................................................................................................................................................................................................................................................................................................................................................	25	1	5.00	5	5	0	0	0	0	0	0
....................................................................................................................................................................................................................................TTAGTTCGCCGAGGATATGTCGATTC..........................................................................................................................................................................	26	1	5.00	5	1	0	0	0	4	0	0
..................TTTTTAGTTTGACGGAAATATATCGT............................................................................................................................................................................................................................................................................................................................................................................................	26	1	5.00	5	2	0	0	0	0	0	3
.....................................................................................................................................................................................................................................TAGTTCGCCGAGGATATGTCGATTC..........................................................................................................................................................................	25	1	5.00	5	4	0	0	0	1	0	0
..........................................................................................................................................................................................................................................................................TTTCCGA-----------------------A---------------------AACCTATTAGCGACATACA.......................................................................................	27	1	5.00	5	1	0	0	0	0	0	4
..................................................................................................................................................................................................................................................................................................................................TATTAGCGACATACAAA-TTAAT-A.............................................................................	23	1	5.00	5	5	0	0	0	0	0	0
......................................TATCGTTTTTAAAGCGACAT----AAC-------------------------------------------------------------------------------------..................................................................................................................................................................................................................................................................................	23	1	5.00	5	0	0	0	0	0	0	5
.........................................................T----AAC-------------------------------------------------------------------------------------TCCACCA------------------------------------------ATAAGAAA-AGGACG..................................................................................................................................................................................................................	25	1	5.00	5	5	0	0	0	0	0	0
.........................................................T----AAC-------------------------------------------------------------------------------------TCCACCA------------------------------------------ATAAGAAA-AGGACGG.................................................................................................................................................................................................................	26	1	5.00	5	5	0	0	0	0	0	0
..................TTTTTAGTTTGACGGAAATATATCGTT...........................................................................................................................................................................................................................................................................................................................................................................................	27	1	5.00	5	2	0	0	0	1	0	2
.........................................................................................................................................................ACCA------------------------------------------ATAAGAAA-AGGACGGAGATATGT.........................................................................................................................................................................................................	27	1	5.00	5	5	0	0	0	0	0	0
........................................................................................................................................................................................................................................TTCGCCGAGGATATGTCGATTCAAA.......................................................................................................................................................................	25	1	5.00	5	5	0	0	0	0	0	0
......................................TATCGTTTTTAAAGCGACAT----AAC-------------------------------------------------------------------------------------TC................................................................................................................................................................................................................................................................................	25	1	4.00	4	4	0	0	0	0	0	0
....................................................................................................................................................................................................................................TTAGTTCGCCGAGGATATGTCGATTCA.........................................................................................................................................................................	27	1	4.00	4	2	0	0	0	1	0	1
........................................................................................................................................................................................................TAAGAAA-AGGACGGAGATATGTCGAGTT...................................................................................................................................................................................................	28	1	4.00	4	3	0	0	0	1	0	0
...........................TGACGGAAATATATCGTTTTTAAAGCGAC................................................................................................................................................................................................................................................................................................................................................................................	29	1	4.00	4	0	0	0	0	0	0	4
...........................................................................................................................................................................................................................................................................TTCCGA-----------------------A---------------------AACCTATTAGCGACATACAAA-T...................................................................................	29	1	4.00	4	2	0	0	0	0	0	2
.........................................................................................................................................................................................................................................................................ATTTCCGA-----------------------A---------------------AACCTATTAGCGACA...........................................................................................	24	1	4.00	4	4	0	0	0	0	0	0
........................................................................................................................................................................................................................GATATGTCGAGTTTAGTTCGCCGAGG......................................................................................................................................................................................	26	1	4.00	4	4	0	0	0	0	0	0
....................................................................................................................................................................................................................................TTAGTTCGCCGAGGATATGTCGATTCAA........................................................................................................................................................................	28	1	4.00	4	1	0	0	0	0	0	3
............................................................................................................................................................................................................................TGTCGAGTTTAGTTCGCCGAGGA.....................................................................................................................................................................................	23	1	4.00	4	1	0	0	0	0	0	3
........................................................................................................................................................CACCA------------------------------------------ATAAGAAA-AGGACGGAGATATG..........................................................................................................................................................................................................	27	1	4.00	4	4	0	0	0	0	0	0
............................................................................................................................................................................................................................................................TCAAAAACGACATATTTCCGA-----------------------A---------------------AACCTA....................................................................................................	28	1	4.00	4	4	0	0	0	0	0	0
.........................................................................................................................................................ACCA------------------------------------------ATAAGAAA-AGGACGGAGATAT...........................................................................................................................................................................................................	25	1	3.00	3	3	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................TTAGCGACATACAAA-TTAAT-ATAAG.........................................................................	25	1	3.00	3	2	0	0	0	1	0	0
....................................................................................................................................................................................................................................................................................................................................TTAGCGACATACAAA-TTAAT-ATAAGTGT......................................................................	28	1	3.00	3	1	0	0	0	0	0	2
...............................................................................................................................................................................................................................CGAGTTTAGTTCGCCGAGGATATGT................................................................................................................................................................................	25	1	3.00	3	1	0	0	0	0	0	2
............................................................................................................................................................................................................................................................................TCCGA-----------------------A---------------------AACCTATTAGCGACA...........................................................................................	21	1	3.00	3	3	0	0	0	0	0	0
...................................................................................................................................................................................................................ACGGAGATATGTCGAGTTTAGTTCGCC..........................................................................................................................................................................................	27	1	3.00	3	3	0	0	0	0	0	0
...................................................................................................................................................................................................................................TTTAGTTCGCCGAGGATATGTCGA.............................................................................................................................................................................	24	1	3.00	3	0	0	0	0	0	0	3
.....................................................................................................................................................................................................................................................................................................................................TAGCGACATACAAA-TTAAT-ATAAGTG.......................................................................	26	1	3.00	3	2	0	0	0	1	0	0
.....................................................................................................................................................................................................................................TAGTTCGCCGAGGATATGTCGATTCAA........................................................................................................................................................................	27	1	3.00	3	0	0	0	0	0	0	3
.....................................................................................................................................................................................................................GGAGATATGTCGAGTTTAGTTCGCC..........................................................................................................................................................................................	25	1	3.00	3	3	0	0	0	0	0	0
.....................................................................................................................................................................................................................................TAGTTCGCCGAGGATATGTCGATTCA.........................................................................................................................................................................	26	1	3.00	3	3	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................TATTTCCGA-----------------------A---------------------AACCTATTAGCGAC............................................................................................	24	1	3.00	3	1	0	0	0	0	0	2
.............................................................................................................................................................................................................................................................................CCGA-----------------------A---------------------AACCTATTAGCGACATACAAA-T...................................................................................	27	1	3.00	3	0	0	0	0	0	0	3
..............................................................................................................................................................................................................A-AGGACGGAGATATGTCGAGTTTAGT...............................................................................................................................................................................................	26	1	3.00	3	3	0	0	0	0	0	0
......................................TATCGTTTTTAAAGCGACAT----AAC-------------------------------------------------------------------------------------TCCACC............................................................................................................................................................................................................................................................................	29	1	3.00	3	3	0	0	0	0	0	0
............................................................................................................................................................................................................................TGTCGAGTTTAGTTCGCCGAG.......................................................................................................................................................................................	21	1	2.00	2	0	0	0	0	0	0	2
.......................................ATCGTTTTTAAAGCGACAT----AAC-------------------------------------------------------------------------------------TCCAC.............................................................................................................................................................................................................................................................................	27	1	2.00	2	2	0	0	0	0	0	0
............................................................................................................................................................................................................................TGTCGAGTTTAGTTCGCCGAGGATAT..................................................................................................................................................................................	26	1	2.00	2	0	0	0	0	0	0	2
.............................................................................................................................................................................................................AA-AGGACGGAGATATGTCGAGTTTAGT...............................................................................................................................................................................................	27	1	2.00	2	2	0	0	0	0	0	0
......................................................................................................................................................TCCACCA------------------------------------------ATAAGAAA-AGGACGGAG...............................................................................................................................................................................................................	24	1	2.00	2	2	0	0	0	0	0	0
..........................................................................................................................................................CCA------------------------------------------ATAAGAAA-AGGACGGAGATATG..........................................................................................................................................................................................................	25	1	2.00	2	2	0	0	0	0	0	0
.............................................................................................................................................................................................................................GTCGAGTTTAGTTCGCCGAGG......................................................................................................................................................................................	21	1	2.00	2	2	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................TCCGA-----------------------A---------------------AACCTATTAGCGACATACAAA-....................................................................................	27	1	2.00	2	2	0	0	0	0	0	0
..................................................AGCGACAT----AAC-------------------------------------------------------------------------------------TCCACCA------------------------------------------ATAAGAA..........................................................................................................................................................................................................................	25	1	2.00	2	1	0	0	0	0	0	1
.....................TTAGTTTGACGGAAATATATCGTTT..........................................................................................................................................................................................................................................................................................................................................................................................	25	1	2.00	2	0	0	0	0	2	0	0
........................................................................................................................................................CACCA------------------------------------------ATAAGAAA-AGGACGGAGATA............................................................................................................................................................................................................	25	1	2.00	2	2	0	0	0	0	0	0
...........TATGTCGTTTTTAGTTTGACGGAAATA..................................................................................................................................................................................................................................................................................................................................................................................................	27	1	2.00	2	2	0	0	0	0	0	0
.....................................................................................................................................................................................................................GGAGATATGTCGAGTTTAGTTCGCCGA........................................................................................................................................................................................	27	1	2.00	2	2	0	0	0	0	0	0
..........................................................................................................................................................................................................................TATGTCGAGTTTAGTTCGCCGAGGATAT..................................................................................................................................................................................	28	1	2.00	2	1	0	0	0	1	0	0
...............................................TAAAGCGACAT----AAC-------------------------------------------------------------------------------------TCCACCA------------------------------------------AT...............................................................................................................................................................................................................................	23	1	2.00	2	2	0	0	0	0	0	0
............................................................................................................................................................................................................................TGTCGAGTTTAGTTCGCCGAGG......................................................................................................................................................................................	22	1	2.00	2	2	0	0	0	0	0	0
..........................TTGACGGAAATATATCGTTTTTAAAGCGAC................................................................................................................................................................................................................................................................................................................................................................................	30	1	2.00	2	0	0	0	0	0	0	2
.............................................................................................................................................................................................................................GTCGAGTTTAGTTCGCCGAGGATATG.................................................................................................................................................................................	26	1	2.00	2	2	0	0	0	0	0	0
..................................................................................................................................................................................................................GACGGAGATATGTCGAGTTTAGTTCGCC..........................................................................................................................................................................................	28	1	2.00	2	2	0	0	0	0	0	0
.............................................................................................................................................................................................................AA-AGGACGGAGATATGTCGAGTTTAG................................................................................................................................................................................................	26	1	2.00	2	2	0	0	0	0	0	0
.............................................TTTAAAGCGACAT----AAC-------------------------------------------------------------------------------------TCCACCA------------------------------------------ATAAG............................................................................................................................................................................................................................	28	1	2.00	2	1	0	0	0	1	0	0
...........................................TTTTTAAAGCGACAT----AAC-------------------------------------------------------------------------------------TCCACCA------------------------------------------A................................................................................................................................................................................................................................	26	1	2.00	2	2	0	0	0	0	0	0
...........................TGACGGAAATATATCGTTTTTAAAGC...................................................................................................................................................................................................................................................................................................................................................................................	26	1	2.00	2	1	0	0	0	0	0	1
............................................................................................................................................................................................................................................................TCAAAAACGACATATTTCCGA-----------------------A---------------------AACCT.....................................................................................................	27	1	2.00	2	2	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................TTCCGA-----------------------A---------------------AACCTATTAGCGACATAC........................................................................................	25	1	2.00	2	2	0	0	0	0	0	0
............................GACGGAAATATATCGTTTTTAAAGCGACA...............................................................................................................................................................................................................................................................................................................................................................................	29	1	2.00	2	2	0	0	0	0	0	0
...............................................TAAAGCGACAT----AAC-------------------------------------------------------------------------------------TCCACCA------------------------------------------ATAAG............................................................................................................................................................................................................................	26	1	2.00	2	2	0	0	0	0	0	0
.........................TTTGACGGAAATATATCGTTTTTAAAGCGAC................................................................................................................................................................................................................................................................................................................................................................................	31	1	2.00	2	0	0	0	0	0	0	2
.........................TTTGACGGAAATATATCGTTTTTAAAGC...................................................................................................................................................................................................................................................................................................................................................................................	28	1	2.00	2	0	0	0	0	0	0	2
..............................................................................................................................................................................................................A-AGGACGGAGATATGTCGAGTTTAGTT..............................................................................................................................................................................................	27	1	2.00	2	2	0	0	0	0	0	0
................................................AAAGCGACAT----AAC-------------------------------------------------------------------------------------TCCACCA------------------------------------------ATAAGAA..........................................................................................................................................................................................................................	27	1	2.00	2	2	0	0	0	0	0	0
..............................................TTAAAGCGACAT----AAC-------------------------------------------------------------------------------------TCCACCA------------------------------------------ATAAGAA..........................................................................................................................................................................................................................	29	1	2.00	2	2	0	0	0	0	0	0
...........................................................................................................................................................CA------------------------------------------ATAAGAAA-AGGACGGAGATATGTCGA......................................................................................................................................................................................................	28	1	2.00	2	2	0	0	0	0	0	0
.......GAGATATGTCGTTTTTAGTTTGACGGA......................................................................................................................................................................................................................................................................................................................................................................................................	27	1	2.00	2	1	0	0	0	1	0	0
........................................TCGTTTTTAAAGCGACAT----AAC-------------------------------------------------------------------------------------TCCACC............................................................................................................................................................................................................................................................................	27	1	2.00	2	2	0	0	0	0	0	0
.........................................................................................................................................................................................................................................TCGCCGAGGATATGTCGATTCAAAAACG...................................................................................................................................................................	28	1	2.00	2	2	0	0	0	0	0	0
..........................................................................................................................................................................................................................TATGTCGAGTTTAGTTCGCCGAGGC.....................................................................................................................................................................................	25	1	2.00	2	0	0	0	0	0	0	2
..........................TTGACGGAAATATATCGTTTTTAAAG....................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0	0
....................................TATATCGTTTTTAAAGCGACAT----AAC-------------------------------------------------------------------------------------TC................................................................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................AAAAACGACATATTTCCGA-----------------------A---------------------AACCTA....................................................................................................	26	1	1.00	1	0	0	0	0	0	0	1
..........................................................................................................................................................................................................................TATGTCGAGTTTAGTTCGCCGAGGATT...................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0	0
.........................................................................................................................................................................................................................ATATGTCGAGTTTAGTTCGCCGAGGATA...................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................ATTTCCGA-----------------------A---------------------AACCTATTAGC...............................................................................................	20	1	1.00	1	1	0	0	0	0	0	0
.................................................AAGCGACAT----AAC-------------------------------------------------------------------------------------TCCACCA------------------------------------------ATAAGAA..........................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................AGCGACATACAAA-TTAAT-ATAAGTG.......................................................................	25	1	1.00	1	1	0	0	0	0	0	0
..........................................................................................................................................................................................................................................CGCCGAGGATATGTCGATTCAAAAAC....................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0	0
..............................................................................................................................................................................................................................................GAGGATATGTCGATTCAAAAACGACA................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................TATTTCCGA-----------------------A---------------------AACCTATTAGC...............................................................................................	21	1	1.00	1	1	0	0	0	0	0	0
.........................................................................................................................................................................................................................................TCGCCGAGGATATGTCGATTCAAAAA.....................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................A-----------------------A---------------------AACCTATTAGCGACATACAAA-T...................................................................................	24	1	1.00	1	1	0	0	0	0	0	0
....................................................................................................................................................................................................................................TTAGTTCGCCGAGGATATGTCGATTCAAA.......................................................................................................................................................................	29	1	1.00	1	1	0	0	0	0	0	0
......................................................................................................................................................................................................................GAGATATGTCGAGTTTAGTTCGCCGAGG......................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0	0
........................................................................................................................................................................................................TAAGAAA-AGGACGGAGATATGTCGAGA....................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0	0
..........................................................................................................................................................CCA------------------------------------------ATAAGAAA-AGGACGGAGATAT...........................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0	0
........................................................................................................................................................................................................TAAGAAA-AGGACGGAGAA.............................................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................GCGACATACAAA-TTAAT-ATAAGTGT......................................................................	25	1	1.00	1	1	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................AACGACATATTTCCGA-----------------------A---------------------AACCTAT...................................................................................................	24	1	1.00	1	1	0	0	0	0	0	0
......................................................................................................................................................................................................................................AGTTCGCCGAGGATATGTCGAT............................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................ACGACATATTTCCGA-----------------------A---------------------AACCTATTA.................................................................................................	25	1	1.00	1	1	0	0	0	0	0	0
..............................................................................................................................................................................................................................TCGAGTTTAGTTCGCCGAGGATATGTCGA.............................................................................................................................................................................	29	1	1.00	1	0	0	0	0	0	0	1
.............................................................................................................................................................................................................................GTCGAGTTTAGTTCGCCGAGGATATGTC...............................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0	0
..............................CGGAAATATATCGTTTTTAAAGCGACA...............................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0	0
.........................................................................................................................................................................................................................................TCGCCGAGGATATGTCGATTCAAAAACGA..................................................................................................................................................................	29	1	1.00	1	1	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................TTCCGA-----------------------A---------------------AACCTATTAGCGACATACAAA-....................................................................................	28	1	1.00	1	1	0	0	0	0	0	0
....................TTTAGTTTGACGGAAATATATCGTT...........................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0	0
......................TAGTTTGACGGAAATATATCGTTTTTA.......................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	1	0	0
..........................................................................................................................................................................................................................TATGTCGAGTTTAGTTCGCCGAGT......................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	1
.........................................................T----AAC-------------------------------------------------------------------------------------TCCACCA------------------------------------------ATAAGAAA-AGGACGGAG...............................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0	0
............................................TTTTAAAGCGACAT----AAC-------------------------------------------------------------------------------------TCCACCA------------------------------------------AT...............................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0	0
.....................................................GACAT----AAC-------------------------------------------------------------------------------------TCCACCA------------------------------------------ATAAGAAA-AG......................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................CATATTTCCGA-----------------------A---------------------AACCTATTAGCGACA...........................................................................................	27	1	1.00	1	1	0	0	0	0	0	0
.............................................TTTAAAGCGACAT----AAC-------------------------------------------------------------------------------------TCCACCA------------------------------------------.................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0	0
...........TATGTCGTTTTTAGTTTGACGGA......................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	1	0	0
....................................................................................................................................................................................................................................TTAGTTCGCCGAGGATATGTCGAA............................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	1
.............TGTCGTTTTTAGTTTGACGGAAATATA................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0	0
......................................................ACAT----AAC-------------------------------------------------------------------------------------TCCACCA------------------------------------------ATAAGAAA-AGGAC...................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0	0
...............................................................AC-------------------------------------------------------------------------------------TCCACCA------------------------------------------ATAAGAAA-AGGACGGA................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0	0
......................................................................................................................................................TCCACCA------------------------------------------ATAAGAAA-AGGACGG.................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................AACGACATATTTCCGA-----------------------A---------------------AACCTATT..................................................................................................	25	1	1.00	1	1	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................GATTCAAAAACGACATATTTCCGA-----------------------................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0	0
.....................TTAGTTTGACGGAAATATATCG.............................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0
...............................................................................................................................................................................................................................CGAGTTTAGTTCGCCGAGGATATGTCGA.............................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0	0
..............................................................................................................................................................................................................A-AGGACGGAGATATGTCGAGTTTAG................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0	0
.........................................................................................................................................................................................................................................TCGCCGAGGATATGTCGATTCA.........................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0
.......................................................CAT----AAC-------------------------------------------------------------------------------------TCCACCA------------------------------------------ATAAGAAA-AGGACG..................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0	0
.........................................................T----AAC-------------------------------------------------------------------------------------TCCACCA------------------------------------------ATAAGAAA-AGG.....................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0
........................................................................................................................................................................................................................................TTCGCCGAGGATATGTCGATTCAAAAA.....................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0	0
.................................................................................................................................................................................................................................AGTTTAGTTCGCCGAGGATATGTCGAT............................................................................................................................................................................	27	1	1.00	1	0	0	0	0	1	0	0
.............................................TTTAAAGCGACAT----AAC-------------------------------------------------------------------------------------TCCACCA------------------------------------------ATA..............................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0	0
..............................................TTAAAGCGACAT----AAC-------------------------------------------------------------------------------------TCCACCA------------------------------------------A................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0	0
...................................................................................................................................................................................................................ACGGAGATATGTCGAGTTTAGTTCGCCGA........................................................................................................................................................................................	29	1	1.00	1	1	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................TTCCGA-----------------------A---------------------AACCTATTAGCGACA...........................................................................................	22	1	1.00	1	1	0	0	0	0	0	0
....................................................................................................................................................................................................................................TTAGTTCGCCGAGGATATGTCGATG...........................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0	0
....................TTTAGTTTGACGGAAATATATCGTTT..........................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	1	0	0
..................................................AGCGACAT----AAC-------------------------------------------------------------------------------------TCCACCA------------------------------------------ATAAGAAA-AG......................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................TCCGA-----------------------A---------------------AACCTATTAGCGAC............................................................................................	20	1	1.00	1	1	0	0	0	0	0	0
...............................................TAAAGCGACAT----AAC-------------------------------------------------------------------------------------TCCACCA------------------------------------------ATA..............................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................AGCGACATACAAA-TTAAT-ATAAGTGT......................................................................	26	1	1.00	1	0	0	0	0	1	0	0
.............TGTCGTTTTTAGTTTGACGGAAATAT.................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0	0
.........................................................................................................................................................................................................................................TCGCCGAGGATATGTCGATTCAAA.......................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0	0
..........................TTGACGGAAATATATCGTTTTTAAAGC...................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	1
....................................TATATCGTTTTTAAAGCGACAT----AAC-------------------------------------------------------------------------------------T.................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0	0
.....................................................GACAT----AAC-------------------------------------------------------------------------------------TCCACCA------------------------------------------ATAAGAAA-AGGACG..................................................................................................................................................................................................................	29	1	1.00	1	1	0	0	0	0	0	0
.........................................................................................................................................................................................................................................TCGCCGAGGATATGTCGATTCAAAA......................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0	0
.........................................................................................................................................................................................................................................TCGCCGAGGATATGTCGAT............................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0	0
...........TATGTCGTTTTTAGTTTGACGGAAA....................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0	0
..........................................................................................................................................................................................................................TATGTCGAGTTTAGTTCGCCGAGGT.....................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0	0
...........................................................................................................................................................CA------------------------------------------ATAAGAAA-AGGACGGAGATATGT.........................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0	0

-7.8	-7.4	-6.8	-6.8

dvi_6727

scaffold_12875:13658227-13658377 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Repeatable elements

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

GGCGCTCCTCTATACTGGAAGGTTTAGTAGTGCTAAAAAAATTTTAGCTCCAGCCACGCTTTTAGCTTTGAAAAAGCTACTAAAAAAAATTATAGAGCCCATTATCGAGGCGCGCCTCTATACTGCAAGGTTTTGCTGTATTGAGGCGCGCCTTGTAAATTCTCGATATCTTAACTTTAAAATCTACATCCACGAGGATCACGGACGCGCCTAGCTCAAACAAAGGATATTAGCTATTGAATGAGGCAAAG *********************************************************......((...................(((((((((...............)))))))))...))*****************************************************************************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR060679 140x9_testes_total	SRR060684 140x9_0-2h_embryos_total	SRR060681 Argx9_testes_total	M047 female body	SRR060675 140x9_ovaries_total	SRR060678 9x140_testes_total	SRR060676 9xArg_ovaries_total	SRR060659 Argentina_testes_total	SRR060670 9_testes_total	SRR060689 160x9_testes_total	M028 head	SRR060667 160_females_carcasses_total	SRR060673 9_ovaries_total	SRR060685 9xArg_0-2h_embryos_total	SRR060687 9_0-2h_embryos_total	SRR060688 160_ovaries_total
....................................................................................................................................................................................................GATCACGGACGCGCCTAGCTCAAAC..............................	25	0	7	0.43	3	1	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................CACGGACGCGCCTAGCTCAAAC..............................	22	0	10	0.20	2	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................GGATATTAGCTATTGAATGAGGCAA..	25	0	13	0.15	2	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................TAAAATCTACATCCACGAGGATCACG................................................	26	0	20	0.15	3	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................GATCACGGACGCGCCTAGCTCAAACA.............................	26	0	7	0.14	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................GGATCACGGACGCGCCTAGCTCAAAC..............................	26	0	7	0.14	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................CGAGGCGCGCCTCTATACTGCA............................................................................................................................	22	0	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1
.....................................................................................................................................................................................................................................TTAGCTATTGAATGAGGCAAA.	21	0	20	0.10	2	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0
................................................................................................................................................................................TTAAAATCTACATCCACGAGGATCACG................................................	27	0	20	0.10	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................AAGGATATTAGCTATTGAATGAGGCAA..	27	0	13	0.08	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................CGGACGCGCCTAGCTCAAAC..............................	20	0	13	0.08	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................ATATTAGCTATTGAATGAGGCAAA.	24	0	14	0.07	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................ATATTAGCTATTGAATGAGGCAA..	23	0	14	0.07	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................ACGCGCCTAGCTCAAACAAA...........................	20	0	15	0.07	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................GCTGTTTTGAGGCGCGCCTTG................................................................................................	21	1	15	0.07	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................CTAGCTCAAACAAAGGATATTAGCTATT.............	28	0	16	0.06	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................AGCTCAAACAAAGGATATTAGCTATT.............	26	0	16	0.06	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
................................................................GCTTTGAAAAAGCTACTAAAAA.....................................................................................................................................................................	22	0	20	0.05	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................AACGAGGAACACGGACGCGC.........................................	20	2	20	0.05	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................TATTAGCTATTGAATGAGGCAA..	22	0	20	0.05	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
.............................GTGCTAAAAAAATTCTAGCTCCA.......................................................................................................................................................................................................	23	1	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
....................................................................TGAAAAAGCTACTAAAAAAA...................................................................................................................................................................	20	0	20	0.05	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
...................................TGAAAATTCTAGCTCCAGCCACGCTT..............................................................................................................................................................................................	26	3	20	0.05	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................CTAGCTCAAACAAAGGATAT.....................	20	0	20	0.05	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
................................................TCCAGCCACGCTTTTAGCTTT......................................................................................................................................................................................	21	0	20	0.05	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
......................................................................................................................................................................................................TCACGGACGCGCCTGGCTCAAACAA............................	25	1	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
..................................................................................................................................................................................AAAATCTACATCCACGAGGATCAC.................................................	24	0	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0