ID:

dvi_6689

 Coordinate:

scaffold_12875:13454616-13454873 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-65.1 -65.1 -65.1

Flybase annnotation

CDS [Dvir\GJ21998-cds]; CDS [Dvir\GJ21998-cds]; exon [dvir_GLEANR_7314:4]; exon [dvir_GLEANR_7314:3]; intron [Dvir\GJ21998-in]

No Repeatable elements found

Sense Strand Reads

##################################################------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CCAGATCGATCGTATTGTTCCTGTGCTGATAGTCACTTTCATTGGGCTTGGTGAGTCACAATATTGTTTCCCATTGGGGAACTCAATGCAATCTTAATTTTGCACTCACACAGCCAAGTGCACATGTGTACACATACTCATACGTATCTGTCATACTGATAGCCTGCTTTGACGGCTCTGTGTACACATGTATTACAGCCGCTGCTTATCGTGCGCTTATTGTTATATATACAACTGTATATACACACATGCACATATATGTGTTCCTTGTATACTGTACTAACTGCGCATTGCTTGTTCTCTTTTAGGCTTGCATATCTACATTTATTGCGGCATCTATTCGCTGTTCAAGCAGATT
**************************************************(((((..........(((((((...)))))))....(((((........))))))))))((((.((((((((((((((((((((...(((...(((.((((((...))))))..)))..)))......))))))))))))......((((((........))).)))........(((((((....))))))).(((((((......))))))).....((((...))))....))))).))).))))..........************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060679
140x9_testes_total
 SRR060681
Argx9_testes_total
 SRR060665
9_females_carcasses_total
 M027
male body		 M028
head
 SRR060684
140x9_0-2h_embryos_total
 V116
male body		 V053
head
 SRR060656
9x160_ovaries_total
 SRR060657
140_testes_total
 SRR060667
160_females_carcasses_total
 SRR060668
160x9_males_carcasses_total
 SRR060671
9x160_males_carcasses_total
 SRR060673
9_ovaries_total
 SRR060674
9x140_ovaries_total
 SRR060678
9x140_testes_total
 SRR060683
160_testes_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060689
160x9_testes_total
 SRR060685
9xArg_0-2h_embryos_total
 V047
embryo
 SRR1106729
mixed whole adult body
 SRR060670
9_testes_total
....ATCGATCGTATTGTTCCTGTGCT........................................................................................................................................................................................................................................................................................................................................... 23 0 1 2.00 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................CCTGTGCTGATAGTCACTTT............................................................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........CGTATTGTTCCTGTGCTGAT........................................................................................................................................................................................................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............ATTGTTCCTGTGCTGATAGTC.................................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...........GTATTGTTCCTGTGCTGATAG...................................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................TGATAGTCACTTTCATTGG......................................................................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................GTCACTTTCATTGGGCTT..................................................................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................ATATCTACATTTATTGCGGC........................ 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.CAGATCGATCGTATTGTT................................................................................................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................TAGTCACTTTCATTGGGCTTG.................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................TACATTTATTGCGGCATCTATTCGCT............. 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......GATCGTATTGTTCCTGTGCT........................................................................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................................ATCTACATTTATTGCGGC........................ 18 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................TTACAGCCGCTGCTTATCGTG................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........CGTATTGTTCCTGTGCTGATAGT..................................................................................................................................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........TCGTATTGTTCCTGTGCTGAT........................................................................................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
............TATTGTTCCTGTGCTGATAGTCACTT................................................................................................................................................................................................................................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................GTCACTTTCATTGGGCTTGGCTTG............................................................................................................................................................................................................................................................................................................... 24 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...GATCGATCGTATTGTTCCTGTGCT........................................................................................................................................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...........................GATAGTCACTTTCATTGGGCT...................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
................................................................................................................................................................................................................................................................................TACTGTATTAACTCCCCATT.................................................................. 20 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................CTACATTTATTGCGGCATC..................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................TTGCATATCAATACTTATTGCG.......................... 22 3 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................GTGCTGATAGTCACTTTCATTGGGC....................................................................................................................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................GTGCTGATAGTCACTTTCAT............................................................................................................................................................................................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................AGTCACTTTCATTGGGCTTG.................................................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................ATTACAGCCGCTGCTTATCGT.................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................TGTTCTCTTTTAGGCTTGCATATCTAC.................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....TCGATCGTATTGTTCCTGT.............................................................................................................................................................................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................TGTGCTGATAGTCACTTTCATTGGGCT...................................................................................................................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................ATTGCGGCATCTATTCGCTGTTC......... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................CATATCTACATTTATTGCGGCA....................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................CCTGTGCTGATAGTCACTTTCATTG.......................................................................................................................................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........ATCGTATTGTTCCTGTGCTGA......................................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................AGTCACTTTCATTGGGCT...................................................................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..AGATCGATCGTATTGTTCCTG............................................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........CGTATTGTTCCTGTGCTGATA....................................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................GGTCTTGGCGTGTCACAATATTGTT.................................................................................................................................................................................................................................................................................................. 25 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....TCGATCGTATTGTTCCTGTGCTGATAG...................................................................................................................................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TACGGCCGGTGCTTTTCGTG................................................................................................................................................. 20 3 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................GCCTGATCTGACGGCTCGGT................................................................................................................................................................................. 20 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..........................................................................................................................................................AATGACAGCCTGCTTTGA.......................................................................................................................................................................................... 18 2 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..............................................................................................................................................................................................TATTACAGCCGGTGC......................................................................................................................................................... 15 1 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.................................CACTTTCATTGGGCTTGGCT................................................................................................................................................................................................................................................................................................................. 20 2 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................AGCCGATGCTGATCGTGC................................................................................................................................................ 18 2 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.............................................................................................................................TTGTACACACACTCAAACGTAT................................................................................................................................................................................................................... 22 3 9 0.11 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................ACAGCCGCTGCTGAGCGTG................................................................................................................................................. 19 2 11 0.09 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

GGTCTAGCTAGCATAACAAGGACACGACTATCAGTGAAAGTAACCCGAACCACTCAGTGTTATAACAAAGGGTAACCCCTTGAGTTACGTTAGAATTAAAACGTGAGTGTGTCGGTTCACGTGTACACATGTGTATGAGTATGCATAGACAGTATGACTATCGGACGAAACTGCCGAGACACATGTGTACATAATGTCGGCGACGAATAGCACGCGAATAACAATATATATGTTGACATATATGTGTGTACGTGTATATACACAAGGAACATATGACATGATTGACGCGTAACGAACAAGAGAAAATCCGAACGTATAGATGTAAATAACGCCGTAGATAAGCGACAAGTTCGTCTAA
**************************************************(((((..........(((((((...)))))))....(((((........))))))))))((((.((((((((((((((((((((...(((...(((.((((((...))))))..)))..)))......))))))))))))......((((((........))).)))........(((((((....))))))).(((((((......))))))).....((((...))))....))))).))).))))..........************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528803
follicle cells		 V116
male body		 SRR060662
9x160_0-2h_embryos_total
 M047
female body
 V053
head
 SRR060686
Argx9_0-2h_embryos_total
 M027
male body		 SRR060658
140_ovaries_total
 SRR060676
9xArg_ovaries_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060687
9_0-2h_embryos_total
 SRR060672
9x160_females_carcasses_total
 SRR060663
160_0-2h_embryos_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060679
140x9_testes_total
 V047
embryo
 SRR060681
Argx9_testes_total
...........................................................................................................................................................................................TGCATAATGGCGCCGACGA........................................................................................................................................................ 19 3 20 8.15 163 0 57 22 7 2 19 0 0 0 17 14 8 0 6 6 2 2 0 1
.......................................................................................................TGAGTCTGTCGGTTC................................................................................................................................................................................................................................................ 15 1 14 7.36 103 103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................GTGAGTCTGTCGGTTC................................................................................................................................................................................................................................................ 16 1 7 1.57 11 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................GGTAACCCCTTGAGTTACGTT........................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................GGTGTATATACAAAAGGAACGT...................................................................................... 22 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........AGCATAACAAGGACACGACTATCAG.................................................................................................................................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TGAGTGTGTCGGTTC................................................................................................................................................................................................................................................ 15 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..TCTAGCTAGCATAACAAGGAC............................................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................GTACACATGTGTATGAGT.......................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................CGGACGAAACTTGCGAGA................................................................................................................................................................................... 18 2 3 0.67 2 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................................CGGACGAAACTGGCGAGAT.................................................................................................................................................................................. 19 2 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................CGGACGAAACAGGCGAGAC.................................................................................................................................................................................. 19 2 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................GAATAGGAGGCGAATAAC........................................................................................................................................ 18 2 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................ATGTTAGCAGATATGTGTGTACGT......................................................................................................... 24 3 6 0.17 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................GTTAGTGTGTCGGTTC................................................................................................................................................................................................................................................ 16 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................AGCAGGCGAATAACTATA.................................................................................................................................... 18 2 7 0.14 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TTAGTGTGTCGGTTC................................................................................................................................................................................................................................................ 15 1 18 0.11 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TCAGTGTGTCGGTTC................................................................................................................................................................................................................................................ 15 1 19 0.11 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................GAAAAGGACGCGAATAACTA...................................................................................................................................... 20 3 20 0.10 2 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0
..........................................................................................................................................................................................ATACATAATGGCGCCGACGA........................................................................................................................................................ 20 3 10 0.10 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................CGGACGAAACTTCTGAGA................................................................................................................................................................................... 18 2 13 0.08 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................CACGAGAATCACAATATACA................................................................................................................................ 20 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
...........................................................................................................................................................................................................................AAAAATATATATGTCGACAT....................................................................................................................... 20 2 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...................................................................................................AAGGTGAGTATGTCGGGTC................................................................................................................................................................................................................................................ 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12875:13454566-13454923 + dvi_6689 CCAGATCGATCG---TATTGTTCCTGTGCTG------------------ATAGTCACTTTCATTGGGCTTGGTGAGTCA------------CAATATTGT---------------TTCCCATTGGGGAACTCAATGCAATCTTAATTTTGCACTCACACAGCCAAGTGCACATG---T---------------GTACACATAC--T----CATA--CGTA--T-------------CTGTCATAC-TGATAGCCTGCTTTGAC-------------------------------------------------------------------------GGCTCTGTGTACAC-------AT---GT--------------A-----------TTA-----------C-AGCCG-----CTGCTTATCGTGCGCTTAT------------------TGTTATATATACAACTGT--------------------ATAT----------ACACACATGCACATATA------TGTGTTC------------------------------CTTGTAT-----ACT--GTACTAACTGCGCA--------------------T--T-GC-TT----GTTCTCT-----TTTAGGCTTGCATATCTACATTTATTGCGGCATCTATTCGCTGTTCAAGCAGATT
droMoj3 scaffold_6496:6892463-6892797 + CGAGTTCGGA---------------------AGCGTTCTAGCTGCTTTGATACCCACTGCTCTTATACTAGGTGAGTCA------------CACTTG------------------------GTTGGGATATTGATGTAAATT-----TA-----------------------------GCAT-----------A----CAT--TCAAACA--TACG--AA--C-------AT---T--G-CAATTCTGA--------TTACAAGGCTTTGGTAGTCTTCTTATCTTACTCACGC-----------------------------------------------AT-ACACAT---GCACATACCGAGGAAACACCCTTTATATATTTTTATTTT------------------------------------------------------------------------------------------------------T----------ATACATATACATATAC------TTGAATTC-----------------------TTGGAATTTCGTAT-----ACA--TTGCTAATTGCGCC--------------------T--T-GG-TT----TCTCATTTCTGTTTTAGCTTTGCAAATCTACATTTATATGGGAATCTACTCGCTGTTCAAGCAAATT
droGri2 scaffold_15245:17775539-17775878 - GATAGGC------------------------AACGCTTTTCCCGCCCTGATTTTGAGTTTACTTGCACTTGGTGAGTCA------------CGGTCTCCTCCCCTCTTCACTCCACTCCCATTGGAGAAATCAATGTGTATTC--------------------GATTGCACAGCACACACA--TGTGCACTTTGTA----------TACG--TATG--TA--------------------TGTATGTAT---------------------------------------------------------------------------------------GCATGTGTTTACTT-------GCCG-GC--------------TCTTTTGCAAATATA-----------TACATACATA-TGTATTTACTGTTCAATAC----------------------------------------------------------------------------------------------------------------------------ATATAAACTCGTACAGT--ACG--AAACTAACTGCGCATTTCCTTGCGCCATCTCTCTC-------TC----GTTCTCG-----TTCAGCCTTACAAATCTACATTTACTATGGCATCTACTCGCTGTTCAAGCAGATT
droWil2 scf2_1100000004909:10245273-10245464 - TGCATAC------------------------------------------------------------------------------------------------------------------------------------ATAC----------------AGCCAAACATTCATA---T---------------CCATACACAC--T----CACA--CAT-----------------------------G--------------------------------------------TATGTACATACATATGTGTGAGTGTTTGTGCGGGTGTGTGTGTGTGTGTGTCAATTT-------TTTG---------------------------------------------------------------------------------TTCTTTTT----GTTTTAGTTTTAGTTGGGTGTATGTATGCATGATCATATAC----------ATATACATATGTGTATA------T--------------------------------------------------G--AC-TTAAGTTCACA----------------------------------------------------------------------------------------TC---------AC
dp5 3:2516682-2517087 - TGAGGCTATTGG---TTCTAGTCCAGTAGCTGAGGCTCTTTCTGTAGTCTTCGTTTCTGGCGGTCTTGTCGGTATGTAAGGC-GTGAATCACGCTCTG----------------------------------GATGCGCATAC--------------------ACTTGCACATC---T---------------GCAACGATAC--A----CATA--CATA--T-------------ATGCTATAATTGG---------------------------------------------------------------------------------------AAATGG-TCTACAA-------AA---AA--------------AATGTTGTGAAATTC-----------C-AACCGCTAGACCGCTTATCGGTCGCTTTTCTATATACTGTATAC----GTTCTATACACGATTGC--------------------ATGTACATATGTATATGTATGTACATATAC------ATGTATTCATGCATACACTTCCCATTTAAACAGAAAAATCCCTA-AGCACACA--GCTTTAAATGCGTA--------------------T--T-G--TT----CTTTGTT------CCAGTGCTTTGGTGGTACCTCTACTACGGCATCTACTCGCTGTTCAAGCACATC
droPer2 scaffold_2:2705768-2706168 - TGAGGCTATTGG---TTCTAGTCCAGTAGCTGAGGCTCTTTCTGTAGTCTTCGTTTCTGGCGGTCTTGTCGGTATGTAAAGC-GTGAATCACGCTCTG----------------------------------GATGCGCATAC--------------------ACTTGCACATC---T---------------GCAACGATAC--A----CATA--CATA--T-------------ATGCTATAATTGG---------------------------------------------------------------------------------------AAATGG-TCTACAA-------AA----A--------------AATGTTGTGAAATTC-----------C-AACCGCTAGACCGCTTATCGGTCGCTTTTCTGTATACTGTATAC----GTTCTATACACGATTGC--------------------ATGT----------ACACATATGTACATATGTATATATGTATTCATGCATACACTTCCCATTTAAACAGAAAAATCCCTA-AGCACACA--GCTTTAATTGCGTA--------------------T--T-G--TT----CTTTGTT------CCAGTGCTTTGGTGGTACCTCTACTACGGCATCTACTCGCTGTTCAAGCACATC
droAna3 scaffold_13266:17628150-17628438 + CC----------------------CTTCTTCGATGCGCTGCCCGTGATCCTTCTATCGGTGGCTCTGTTCGGTGAGTTGCAA-ATGAGTCATCAC-----------TGCTCT--------------------C---------T--------------------GCTT-------------------------------GGTG------CA--AATATAGA--C-------------AGCGTGTTCTTGG---------------------------------------------------------------------------------------TAATGGG-ATACAT---ACACATTGCCCGCAGTCGTTGTTTATTTATTGTGAAATTACTGTGTATGGGGGGATCCACACTGCTCTTATCGCTCTGCAA---------------------------------TTA-----------------------------------------------------------------------------------------------------------------ATCTGTTTTTGTT--------------------T--C-CT-TT----ATTTTCC------GCAGTTCTCGGATGGTATTTGTACTATGGAATCTACTCGCTTTTCAAGCAAATT
droBip1 scf7180000396735:890154-890259 + AC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTGCTTATCGCTCAACAAT-------TA-------------------------------------------------------------------------------------------------------------------------------------------ATCTG----TTTT--------------------T--T-TT-TCGCTTATTTTCC------GCAGTTCTGGGATGGTATTTGTACTATGGCATCTACTCGCTTTTCAAGCAAATT
droKik1 scf7180000302682:436983-437038 - T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T------TTAGCTCTCAGCGTGTATCTGTACTATGGCATCTATTCGCTCTACAAGCAGCTT
droFic1 scf7180000454044:501036-501077 - AT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATCTGTACTATGGTGTTTACTCGCTCTTCAAGAAGATC
droEle1 scf7180000491228:232754-233034 + CC------------------------------------TACCGGTCATCTTGCTCTCTCTGTCCATGCTCGGTAAGTTAAAC-GTGACTCAT-------------------------------------------------CC--------------------GCTTTAATCAAATATATAT-----------A----TAT--GTG-----AGA--CATA--T-------------TTTATCTGTGTGC---------------------------------------------------------------------------------------CAATGGGTATACAC-------AG---CC--------------TTTGTGGCGAAATTG-----------TGAATCCCCATTGCGCTTATCGTTCGGGCGT-------TTT----TGATCGTTCAG----TAATTAT--------------------A-------------------------------------------------------------------------CTCAGAC-----ACG--GTGATGACTGTTCT--------------------C--T-AT-TT----GTTTGTT------TCAGTGCTCGCCTGGTATCTCTACTACGGCATCTACTCGCTCTTCAAGCAGATC
droRho1 scf7180000766409:28608-28931 + CCAGATCATCGAATCCTCGATGCCCTTCATGAGTGCCCTGCCAGCTATCTTGCTCTCTGTGTTCATGCTGGGTAAGTTTAAC-GTGACTCAT-------------------------------------------------CC--------------------GCCTCCATAAAATATATAC-----------A----CAT--TTGTACA--TATG--TA---------------T--G-TATTGCTGG---------------------------------------------------------------------------------------AAATGAGTCTACAC-------AG---TC--------------TTTGTGGCGAAATTG-----------TGAATCCCCAGTGCGCTTATCGCTTGGTGCTTGGTCGTCTG----TGATCGTCGTG----TAATTGC--------------------A-------------------------------------------------------------------------CTCGGAC-----ACG--ATGCTGATTGTTCT--------------------C--T-AT-TT----GCTTGTT------TCAGTGCTCGGCTGGTATCTGTACTATGGAATCTACTCGCTCTTCAAACAGATC
droBia1 scf7180000302292:1658283-1658596 + TCGGATCCTCGG--------TGCCCTTCCTGAACGCCCTGCCAGTTATTTTGCTCTCTGTGCTGGTTCTTGGTAAGATTTAC-GTGACTCAG-------------------------------------------------CC--------------------ACATGCATATCATATATGT-----------G----CAT--GGCCACATATA--CATA--C-------------GCCCTGCTTCTGG---------------------------------------------------------------------------------------AAATGGGTATACAC-------AG---CT--------------CTTGTTGTGAAATTG-----------TGGATCCCCACTGCGCTTATCGCTCGGCGGT-------CGG----GGATCATTCTG----TAATTAG--------------------A-------------------------------------------------------------------------CTCGGAC-----ATG--GTGCTTATTGTTCT--------------------C--C-AT-TT----GCTCGTT------TCAGTGCTCGGATGGTATCTCTACTATGGCATCTACTCGCTCTTCAAGCAGATC
droTak1 scf7180000415991:164160-164469 - TCGGATCCGCGA--------TGCCCTTCATGAGCGCCCTACCCATTTTATTGATCTCGGTGTCTGTTCTCCGTAAGTTTTTCAGTGACTCAT-------------------------------------------------TC--------------------TCTTGTATACCACAT---------------GTATTGATAT--A--CA--TATA--TATACAAAG--------A--ACTGATTCTGG---------------------------------------------------------------------------------------AAATGTGTATACAC-------AT---TA--------------ATTGTTGTGAAATTG-----------TGAATCC--------CTTATCGCGCGGGGCT-------GTG----TGATCTTACTG----TAATTAC--------------------C-------------------------------------------------------------------------ATCGGAC-----ACGCCGAGCTGATTGTTCT--------------------C--C-AT-TT----GCTCATT------TCAGTGCTCAGCTGGTATCTGTACTACGGGATCTACTCGCTCTTCAAGCAGATC
droEug1 scf7180000409663:617656-617977 + CCAGAT---------------GCCCTTCTTAAGCGCAGTTCCAATTATCTTAATCTCGGTGGGAATTCTTGGTAAG--------TGACTCAT-------------------------------------------------TC--------------------ACTTGCACATCGTATACACAAGTTTTTCTTGTATGTATAT--G--CA--CGTACATA--GTATGTACATT--AGCGTTGTATCTGG---------------------------------------------------------------------------------------AAATGGGTATATAC-------AG----C--------------CTTGTTGTGAAATTG-----------TGGTTCCCCAATGCGCTTATCGCTTGTTGCT-------CTG----CGATCGTTTTG----TAATTGG--------------------A-------------------------------------------------------------------------CTCAGAC-----ATG--ATGTTAATT-TTTT--------------------C--T-AT-TT----GTTCGTT------TCAGTGCTCACATGGTATCTGTACTACGGCATCTACTCGCTCTTCAAGCAGATC
dm3 chr2R:14721240-14721537 - CCAGATCATCGG---AAATACATCTTTCCTGAGCGCTCTTCCAATCATTTTCGTGGATGTTGGCCTGCTCTGTAAG--------TGACTCACCAC-----------T----------------------------------------TC--------------------------------------------------------ATACA--TACA--TA---------------A--GCTCTATCTGG---------------------------------------------------------------------------------------AAATGGGTATACACAATACACACTGGCC--------------GTTGTTGCGAAATTG-----------TGGATCCCCATTGCGCTTATCGCTCGACGGT-------CTG----CGATCGTTCTA----TAATTGC--------------------G-------------------------------------------------------------------------CTTGGGC-----ACG--ATGCTTATTTTTCT--------------------C--C-AT-TC----GCTCGTT-----TTCAGTGCTGACCTGGTATCTCTACTACGGCATCTACTCGCTCTTCAAGCAGATC
droSim2 2r:15369635-15369927 - dsi_21576 CCAAGTCATCGG---AAGTACACCCTTCCTGAGCGCTCTTCCAATCATTTTGGTGGATGTGGGCCTGCTCGGTAAG--------TGAATCACCAC-----------T----------------------------------------TC--------------------------------------------------------GTACA--TACA--TA---------------A--GCTCTATCTGG---------------------------------------------------------------------------------------AAATGGGTATACAC-------ACTGTCC--------------GTTGTTGCGAAATTG-----------TGGATCCCCATTTCGCTTATCGCTCGGCGGT-------TTG----CGATCGTTCCG----TAATTGC--------------------G-------------------------------------------------------------------------CTGGTAC-----ACG--ATGCTTATTTTTCT--------------------CTCGTTT-TC----GCTCGTT------TCAGTGCTGACCTGGTATCTCTACTACGGCATCTACTCGCTCTTCAAGCAGATC
droSec2 scaffold_1:12229382-12229670 - CCAAGTCATCGG---AAGTACACCCTTCCTGAGCGCTCTTCCACTCATTTTGGTGGATGTGGGCCTGCTCGGTAAG--------TGAATCACCAC-----------T----------------------------------------TC--------------------------------------------------------ATACA--TACA--TA---------------A--GCTCTATCTGG---------------------------------------------------------------------------------------A-ATGTGTATACAC-------ACTGGCC--------------GTTGTTGCGAAATTG-----------TGGATCCCCATTTTGCTTATCGCTCGACGGT-------TTG----CGATCGTTCTG----TAATTGC--------------------G-------------------------------------------------------------------------TTGGTAC-----ACG--ATGCTTATTTTTCT--------------------C--C-AT-TC----GCTCGTT------TCAGTGCTGACCTGGTATCTCTACTACGGCATCTACTCGCTCTTCAAGCAGATC
droYak3 2R:14474136-14474439 + CCAGGTCATCGA---AACTACGCCATTCGTGGGCGCCCTTCCGATCATTTTGGTGGATGTGGGCCTGCTTGGTAAG--------TGAATCACCGCTTT----------------------------------CTT----------------------------------------------------------------------GTGCA--TACA--TA--C-------GCTGCA--GCTATATCTGG---------------------------------------------------------------------------------------AAATGGGTATACAC-------ATTCTCT--------------GTTATTGCGAAATTG-----------TTCATCCCCATTGCGCTTATCGCTCAACGGC-------TTG----CGATCGTACAG----TAATTGC--------------------A-------------------------------------------------------------------------CTTGGAC-----ACG--ATGCTAATGTATCA--------------------C--C-ATTTCACCATCTCGTT------TCAGTGCTGAGCTGGTATCTGTACTACGGCATCTACTCGCTCTTCAAGCAGATC
droEre2 scaffold_4845:8913342-8913612 - CC-----------------------TTCCCGAACGCCCTTCCACTCCTGTTTGTAATTGTGGGCCTGCTCGGTAAG--------TGAATCACCAC-------------------------------------------------------------------------------------------------------GATA------CA--TATATATA--C------------A--TCTATATCTGG---------------------------------------------------------------------------------------AAATGGGTATACAC-------ATTGTTG--------------GTTGTTGCGAACTTG-----------TGGATCCCCATTGCGCTTATCGCTCAACGGT-------CTG----CGATCGTAACG----TAATTAC--------------------A-------------------------------------------------------------------------CTCGGAC-----ACG--ATGCTAAGTTTTCT--------------------C--C-AT-TT----GCTCGTT------TCAGTGCTGAGCTGGTATCTTTACTACGGCATCTACTCGCTCTTCAAGCAGATC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
CCAGATCGATCG---TATTGTTCCTGTGCTG------------------ATAGTCACTTTCATTGGGCTTGGTGAGTCA------------CAATATTGT---------------TTCCCATTGGGGAACTCAATGCAATCTTAATTTTGCACTCACACAGCCAAGTGCACATG---T---------------GTACACATAC--T----CATA--CGTA--T-------------CTGTCATAC-TGATAGCCTGCTTTGAC-------------------------------------------------------------------------GGCTCTGTGTACAC-------AT---GT--------------A-----------TTA-----------C-AGCCG-----CTGCTTATCGTGCGCTTAT------------------TGTTATATATACAACTGT--------------------ATAT----------ACACACATGCACATATA------TGTGTTC------------------------------CTTGTAT-----ACT--GTACTAACTGCGCA--------------------T--T-GC-TT----GTTCTCT-----TTTAGGCTTGCATATCTACATTTATTGCGGCATCTATTCGCTGTTCAAGCAGATTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....ATCGATCG---TATTGTTCCTGTGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002001000000000000100000000000000000000000000000000000000000000000
......................CCTGTGCTG------------------ATAGTCACTTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000100000000000000000000000000000000000000000
..........CG---TATTGTTCCTGTGCTG------------------AT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
................ATTGTTCCTGTGCTG------------------ATAGTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
...........G---TATTGTTCCTGTGCTG------------------ATAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
.............................TG------------------ATAGTCACTTTCATTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
....................................................GTCACTTTCATTGGGCTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCTACATTTATTGCGGC........................2011.001010000000000000000000000000000000000000000000000000000000000000
.CAGATCGATCG---TATTGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000010000000000000000000000000000000000000000000000000000000
..................................................TAGTCACTTTCATTGGGCTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACATTTATTGCGGCATCTATTCGCT.............2611.001000000000000000000000000000000010000000000000000000000000000000
.......GATCG---TATTGTTCCTGTGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTACATTTATTGCGGC........................1811.001000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................TTA-----------C-AGCCG-----CTGCTTATCGTG.............................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..........CG---TATTGTTCCTGTGCTG------------------ATAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.........TCG---TATTGTTCCTGTGCTG------------------AT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000100000000000000000000000000
...............TATTGTTCCTGTGCTG------------------ATAGTCACTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000001000000000000000000000000000000000
...GATCGATCG---TATTGTTCCTGTGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000100000000000000000000000000000
..............................G------------------ATAGTCACTTTCATTGGGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000100000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACATTTATTGCGGCATC.....................1911.001001000000000000000000000000000000000000000000000000000000000000
.........................GTGCTG------------------ATAGTCACTTTCATTGGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000000000000000000000000000000000000000000000000000000000000
.........................GTGCTG------------------ATAGTCACTTTCAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
...................................................AGTCACTTTCATTGGGCTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................A-----------TTA-----------C-AGCCG-----CTGCTTATCGT..............................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T----GTTCTCT-----TTTAGGCTTGCATATCTAC....................................2711.001001000000000000000000000000000000000000000000000000000000000000
.....TCGATCG---TATTGTTCCTGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
........................TGTGCTG------------------ATAGTCACTTTCATTGGGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000100000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCGGCATCTATTCGCTGTTC.........2311.001000000000000000000000000100000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATATCTACATTTATTGCGGCA.......................2211.001000000000000000000000000000000010000000000000000000000000000000
......................CCTGTGCTG------------------ATAGTCACTTTCATTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000001000000000000000000000000000000000
........ATCG---TATTGTTCCTGTGCTG------------------A.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000000000000000000000000000000000000000000000000000000000000
...................................................AGTCACTTTCATTGGGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000001000000000000000000000000000000000
..AGATCGATCG---TATTGTTCCTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
..........CG---TATTGTTCCTGTGCTG------------------ATA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000100000000000000000000000000000000000000000000
.....TCGATCG---TATTGTTCCTGTGCTG------------------ATAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000001000000000000000000000000000000000000000
......................................................CACTTTCATTGGGCTTGGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2070.141000000000000000000000000000000010000000000000000000000000000000
droMoj3
CGAGTTCGGA---------------------AGCGTTCTAGCTGCTTTGATACCCACTGCTCTTATACTAGGTGAGTCA------------CACTTG------------------------GTTGGGATATTGATGTAAATT-----TA-----------------------------GCAT-----------A----CAT--TCAAACA--TACG--AA--C-------AT---T--G-CAATTCTGA--------TTACAAGGCTTTGGTAGTCTTCTTATCTTACTCACGC-----------------------------------------------AT-ACACAT---GCACATACCGAGGAAACACCCTTTATATATTTTTATTTT------------------------------------------------------------------------------------------------------T----------ATACATATACATATAC------TTGAATTC-----------------------TTGGAATTTCGTAT-----ACA--TTGCTAATTGCGCC--------------------T--T-GG-TT----TCTCATTTCTGTTTTAGCTTTGCAAATCTACATTTATATGGGAATCTACTCGCTGTTCAAGCAAATTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................GTTCTAGCTGCTTTGATACCCACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002200000
........................................GCTGCTTTGATACCCACTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--------------------T--T-GG-TT----TCTCATTTCTGTTTTAG..................................................2411.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGGGAATCTACTCGCTGT...........2121.002100001
....................................TCTAGCTGCTTTGATACCCACTGCTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
...GTTCGGA---------------------AGCGTTCTAGCTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
...GTTCGGA---------------------AGCGTTCTAGCTGCTTTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.GAGTTCGGA---------------------AGCGTTCTAGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTACTCGCTGTTCAAGC.....1920.501100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATGGGAATCTACTCGCTGT...........2220.501100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGGGAATCTACTCGCT.............1920.501100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCTACATTTATATGGGA........................2020.501100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATATGGGAATCTACTCGCTGTTCA........2620.501000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTTGCAAATCTACATT.................................1920.501100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATATGGGAATCTACTCGCT.............2120.501100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATATGGGAATCTACTCGCTGTTCAAG......2820.501000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGGAATCTACTCGCTGTTCAAGC.....2620.501100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTATATGGGAATCTACTC................2020.501100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATGGGAATCTACTCGCTGTTCA........2520.501100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGGAATCTACTCGCTGTT..........2120.501100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATCTACTCGCTGTTCAAGC.....2120.501100000
droGri2
GATAGGC------------------------AACGCTTTTCCCGCCCTGATTTTGAGTTTACTTGCACTTGGTGAGTCA------------CGGTCTCCTCCCCTCTTCACTCCACTCCCATTGGAGAAATCAATGTGTATTC--------------------GATTGCACAGCACACACA--TGTGCACTTTGTA----------TACG--TATG--TA--------------------TGTATGTAT---------------------------------------------------------------------------------------GCATGTGTTTACTT-------GCCG-GC--------------TCTTTTGCAAATATA-----------TACATACATA-TGTATTTACTGTTCAATAC----------------------------------------------------------------------------------------------------------------------------ATATAAACTCGTACAGT--ACG--AAACTAACTGCGCATTTCCTTGCGCCATCTCTCTC-------TC----GTTCTCG-----TTCAGCCTTACAAATCTACATTTACTATGGCATCTACTCGCTGTTCAAGCAGATTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
....................................TTTTCCCGCCCTGATTTTGAGTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCATCTACTCGCTGTTCAAGCA....2311.00110
.......................................TCCCGCCCTGATTTTGAGTTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110
......C------------------------AACGCTTTTCCCGCCCTGATTTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110
...............................AACGCTTTTCCCGCCCTGATTTTGAGTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00110
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATGGCATCTACTCGCTGTTCAAGCA....2711.00110
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTATGGCATCTACTCGCTGTT..........2211.00110
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTATGGCATCTACTCGCTGTTCA........2411.00110
....................................TTTTCCCGCCCTGATTTTGAGTTTACTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00110
...................................CTTTTCCCGCCCTGATTTTGAGTTTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGCATCTACTCGCTGTTCA........2211.00110
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATGGCATCTACTCGCTGT...........2011.00110
droWil2
TGCATAC------------------------------------------------------------------------------------------------------------------------------------ATAC----------------AGCCAAACATTCATA---T---------------CCATACACAC--T----CACA--CAT-----------------------------G--------------------------------------------TATGTACATACATATGTGTGAGTGTTTGTGCGGGTGTGTGTGTGTGTGTGTCAATTT-------TTTG---------------------------------------------------------------------------------TTCTTTTT----GTTTTAGTTTTAGTTGGGTGTATGTATGCATGATCATATAC----------ATATACATATGTGTATA------T--------------------------------------------------G--AC-TTAAGTTCACA----------------------------------------------------------------------------------------TC---------ACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................................................................................................................................................................................................................................................................................................ATACATATGTGTGAGTGT...........................................................................................................................................................................................................................................................................................................................................................................................1830.33100010
..................................................................................................................................................................................................CATACACAC--T----CACA--CAT-----------------------------G--------------------------------------------T...................................................................................................................................................................................................................................................................................................................................................................................................................1930.33100001
dp5
TGAGGCTATTGG---TTCTAGTCCAGTAGCTGAGGCTCTTTCTGTAGTCTTCGTTTCTGGCGGTCTTGTCGGTATGTAAGGC-GTGAATCACGCTCTG----------------------------------GATGCGCATAC--------------------ACTTGCACATC---T---------------GCAACGATAC--A----CATA--CATA--T-------------ATGCTATAATTGG---------------------------------------------------------------------------------------AAATGG-TCTACAA-------AA---AA--------------AATGTTGTGAAATTC-----------C-AACCGCTAGACCGCTTATCGGTCGCTTTTCTATATACTGTATAC----GTTCTATACACGATTGC--------------------ATGTACATATGTATATGTATGTACATATAC------ATGTATTCATGCATACACTTCCCATTTAAACAGAAAAATCCCTA-AGCACACA--GCTTTAAATGCGTA--------------------T--T-G--TT----CTTTGTT------CCAGTGCTTTGGTGGTACCTCTACTACGGCATCTACTCGCTGTTCAAGCACATCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTACCTCTACTACGGC........................2017.0070700000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTACTCGCTGTTCAAGCAC...2115.0050500000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTACTCGCTGTTCAAGCA....2013.0030300000000
.....................................CTTTCTGTAGTCTTCGTTTCTGGCGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030300000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................ACCGCTAGACCGCTTATCGGT.............................................................................................................................................................................................................................................................................2112.0020200000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTACCTCTACTACGGC........................1912.0020200000000
.....................................CTTTCTGTAGTCTTCGTTTCTGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020200000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTACTCGCTGTTCAAGC.....1912.0020200000000
.........................GTAGCTGAGGCTCTTTCTGTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020200000000
...................................................CGTTTCTGGCGGTCTTGTCGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020100001000
.........................GTAGCTGAGGCTCTTTCTGTAGTCTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
...........................AGCTGAGGCTCTTTCTGTAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
....................GTCCAGTAGCTGAGGCTCTTTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
...........G---TTCTAGTCCAGTAGCTGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.............................CTGAGGCTCTTTCTGTAGTCTTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCTCTACTACGGCATCTACTCGC..............2511.0010100000000
.............................................AGTCTTCGTTTCTGGCGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------------------T--T-G--TT----CTTTGTT------CCAGTGCT..............................................2111.0010100000000
.................................................TTCGTTTCTGGCGGTCTTGTCGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGGCATCTACTCGCTGTTCAAGCACA..2811.0010100000000
..............................................GTCTTCGTTTCTGGCGGTCTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGTGGTACCTCTACTACGGC........................2411.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................AA---AA--------------AATGTTGTGAAATTC-----------C-...................................................................................................................................................................................................................................................................................................2011.0010100000000
...............TTCTAGTCCAGTAGCTGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
...........G---TTCTAGTCCAGTAGCTGAGGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000001000
.....................................CTTTCTGTAGTCTTCGTTTCTGGCGGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000001000
..................TAGTCCAGTAGCTGAGGCTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000000
.......................................................................................................................................................................................................ATAC--A----CATA--CATA--T-------------ATGCTAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
................TCTAGTCCAGTAGCTGAGGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...........G---TTCTAGTCCAGTAGCTGAGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
................................................CTTCGTTTCTGGCGGTCTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
...........................AGCTGAGGCTCTTTCTGTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.......................................TTCTGTAGTCTTCGTTTCTGGCGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACTACGGCATCTACTCGC..............2011.0010100000000
..................TAGTCCAGTAGCTGAGGCTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTCTACTACGGCATCTACTCGCT.............2511.0010100000000
.....................................CTTTCTGTAGTCTTCGTTTCTGGCGGTCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010010000000
....................GTCCAGTAGCTGAGGCTCTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000000
..............................................GTCTTCGTTTCTGGCGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT----CTTTGTT------CCAGTGCTTTGG..........................................2111.0010100000000
.....................................CTTTCTGTAGTCTTCGTTTCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
................................................CTTCGTTTCTGGCGGTCTTGTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACCTCTACTACGGCATCTACTCG...............2511.0010100000000
..........................TAGCTGAGGCTCTTTCTGTAGTCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.................CTAGTCCAGTAGCTGAGGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
............................................TAGTCTTCGTTTCTGGCGGTCTTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.....................................CTTTCTGTAGTCTTCGTTTCTGGCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
............................GCTGAGGCTCTTTCTGTAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
....................GTCCAGTAGCTGAGGCTCTTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...................AGTCCAGTAGCTGAGGCTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTACTACGGCATCTACTCG...............2111.0010100000000
..........GG---TTCTAGTCCAGTAGCTGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.........................GTAGCTGAGGCTCTTTCTGTAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGC--------------------ATGTACATATGTATATG.............................................................................................................................................................................................2211.0010100000000
...................AGTCCAGTAGCTGAGGCTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
droPer2
TGAGGCTATTGG---TTCTAGTCCAGTAGCTGAGGCTCTTTCTGTAGTCTTCGTTTCTGGCGGTCTTGTCGGTATGTAAAGC-GTGAATCACGCTCTG----------------------------------GATGCGCATAC--------------------ACTTGCACATC---T---------------GCAACGATAC--A----CATA--CATA--T-------------ATGCTATAATTGG---------------------------------------------------------------------------------------AAATGG-TCTACAA-------AA----A--------------AATGTTGTGAAATTC-----------C-AACCGCTAGACCGCTTATCGGTCGCTTTTCTGTATACTGTATAC----GTTCTATACACGATTGC--------------------ATGT----------ACACATATGTACATATGTATATATGTATTCATGCATACACTTCCCATTTAAACAGAAAAATCCCTA-AGCACACA--GCTTTAATTGCGTA--------------------T--T-G--TT----CTTTGTT------CCAGTGCTTTGGTGGTACCTCTACTACGGCATCTACTCGCTGTTCAAGCACATCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTGGTGGTACCTCTACTACGGC........................2513.003030000
.................................GGCTCTTTCTGTAGTCTTCGTTTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002020000
.....................................................................................GAATCACGCTCTG----------------------------------GATGCGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002200000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTACCTCTACTACGGC........................2012.002020000
...............TTCTAGTCCAGTAGCTGAGGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.........................GTAGCTGAGGCTCTTTCTGTAGTCTTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
................................................CTTCGTTTCTGGCGGTCTTGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.......ATTGG---TTCTAGTCCAGTAGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
................TCTAGTCCAGTAGCTGAGGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
....................................TCTTTCTGTAGTCTTCGTTTCTGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTACTCGCTGTTCAAG......1811.001100000
.............................................AGTCTTCGTTTCTGGCGGTCTTGTCGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
.................CTAGTCCAGTAGCTGAGGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
...............TTCTAGTCCAGTAGCTGAGGCTCTTTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCGCTGTTCAAGCACATC2011.001010000
.....................................CTTTCTGTAGTCTTCGTTTCTGGCGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
...............TTCTAGTCCAGTAGCTGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTACTACGGCATCTACTCG...............2111.001000100
...........G---TTCTAGTCCAGTAGCTGAGGCTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTTTGGTGGTACCTCTACTACGGC........................2711.001010000
.......ATTGG---TTCTAGTCCAGTAGCTGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
.............................................AGTCTTCGTTTCTGGCGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
...........................................GTAGTCTTCGTTTCTGGCGGTCTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
..........................................TGTAGTCTTCGTTTCTGGCGGTCTTGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCTCTACTACGGCATCTACTCGCTGTT..........2911.001010000
....................................................GTTTCTGGCGGTCTTGTCGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
................................................CTTCGTTTCTGGCGGTCTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
...........................AGCTGAGGCTCTTTCTGTAGTCTTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
droAna3
CC----------------------CTTCTTCGATGCGCTGCCCGTGATCCTTCTATCGGTGGCTCTGTTCGGTGAGTTGCAA-ATGAGTCATCAC-----------TGCTCT--------------------C---------T--------------------GCTT-------------------------------GGTG------CA--AATATAGA--C-------------AGCGTGTTCTTGG---------------------------------------------------------------------------------------TAATGGG-ATACAT---ACACATTGCCCGCAGTCGTTGTTTATTTATTGTGAAATTACTGTGTATGGGGGGATCCACACTGCTCTTATCGCTCTGCAA---------------------------------TTA-----------------------------------------------------------------------------------------------------------------ATCTGTTTTTGTT--------------------T--C-CT-TT----ATTTTCC------GCAGTTCTCGGATGGTATTTGTACTATGGAATCTACTCGCTTTTCAAGCAAATTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................................GATCCTTCTATCGGTGGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.004100030
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTCGGATGGTATTTGTACTATGGA........................2713.003100020
...........................................GTGATCCTTCTATCGGTGGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000020
......................................TGCCCGTGATCCTTCTATCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000002
...........................................GTGATCCTTCTATCGGTGGCTCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
..............................................ATCCTTCTATCGGTGGCTCTGTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
..................................................TTCTATCGGTGGCTCTGTTCGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.........................................................................................................................................................................................................G------CA--AATATAGA--C-------------AGCGTGTTCTTGG---------------------------------------------------------------------------------------TA.......................................................................................................................................................................................................................................................................................................................................................................2711.001000010
..............................CGATGCGCTGCCCGTGATCCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
..................................................................................................................................................................................................................................................................................................................................................................................................GAAATTACTGTGTATGGGG....................................................................................................................................................................................................................................................................................................1911.001000001
...........................................GTGATCCTTCTATCGGTGGCTCTGTTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000010
.............................TCGATGCGCTGCCCGTGATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
............................................................................................................................................................................................................................................................................................................................................................................GCAGTCGTTGTTTATTTATTG........................................................................................................................................................................................................................................................................................................................2111.001000001
...........................................GTGATCCTTCTATCGGTGGCTCTGTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTATGGAATCTACTCGCTTTTCAAGC.....2711.001100000
........................CTTCTTCGATGCGCTGCCCGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTACTATGGAATCTACTCGCT.............2211.001000010
.............................................GATCCTTCTATCGGTGGCTCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTCGGATGGTATTTGTACT.............................2211.001000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTGTACTATGGAATCTACTC................2411.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTACTATGGAATCTACTC................2011.001000001
............................................TGATCCTTCTATCGGTGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000001
.......................................................................................................................................................................................................................................................................................................................................................................................................TACTGTGTATGGGGGGATCCA.............................................................................................................................................................................................................................................................................................2111.001100000
.........................TTCTTCGATGCGCTGCCCGTGATCCTTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
................................ATGCGCTGCCCGTGATCCTTCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTATGGAATCTACTCGCTTTTCA........2611.001000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTCGGATGGTATTTGT................................1911.001000010
...........................................GTGATCCTTCTATCGGTGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
...............................GATGCGCTGCCCGTGATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.............................................GATCCTTCTATCGGTGGCTCTGTTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGTACTATGGAATCTACTC................2211.001000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTATGGAATCTACTCGCTTTTCA........2411.001000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATTTGTACTATGGAATCTACTCGC..............2711.001100000
.C----------------------CTTCTTCGATGCGCTGCCCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGGTATTTGTACTATGGAATC.....................2411.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTACTATGGAATCTACTCGCTTTTC.........2811.001000001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTATGGAATCTACTCGCT.............2111.001000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGTACTATGGAATCTACTCGC..............2411.001000010
......................................TGCCCGTGATCCTTCTATCGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
droBip1
AC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTGCTTATCGCTCAACAAT-------TA-------------------------------------------------------------------------------------------------------------------------------------------ATCTG----TTTT--------------------T--T-TT-TCGCTTATTTTCC------GCAGTTCTGGGATGGTATTTGTACTATGGCATCTACTCGCTTTTCAAGCAAATTSizeHit CountTotal NormTotal
No Reads
droKik1
T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T------TTAGCTCTCAGCGTGTATCTGTACTATGGCATCTATTCGCTCTACAAGCAGCTTSizeHit CountTotal NormTotal
No Reads
droFic1
AT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATCTGTACTATGGTGTTTACTCGCTCTTCAAGAAGATCSizeHit CountTotal NormTotal
No Reads
droEle1
CC------------------------------------TACCGGTCATCTTGCTCTCTCTGTCCATGCTCGGTAAGTTAAAC-GTGACTCAT-------------------------------------------------CC--------------------GCTTTAATCAAATATATAT-----------A----TAT--GTG-----AGA--CATA--T-------------TTTATCTGTGTGC---------------------------------------------------------------------------------------CAATGGGTATACAC-------AG---CC--------------TTTGTGGCGAAATTG-----------TGAATCCCCATTGCGCTTATCGTTCGGGCGT-------TTT----TGATCGTTCAG----TAATTAT--------------------A-------------------------------------------------------------------------CTCAGAC-----ACG--GTGATGACTGTTCT--------------------C--T-AT-TT----GTTTGTT------TCAGTGCTCGCCTGGTATCTCTACTACGGCATCTACTCGCTCTTCAAGCAGATCSizeHit CountTotal NormTotal
No Reads
droRho1
CCAGATCATCGAATCCTCGATGCCCTTCATGAGTGCCCTGCCAGCTATCTTGCTCTCTGTGTTCATGCTGGGTAAGTTTAAC-GTGACTCAT-------------------------------------------------CC--------------------GCCTCCATAAAATATATAC-----------A----CAT--TTGTACA--TATG--TA---------------T--G-TATTGCTGG---------------------------------------------------------------------------------------AAATGAGTCTACAC-------AG---TC--------------TTTGTGGCGAAATTG-----------TGAATCCCCAGTGCGCTTATCGCTTGGTGCTTGGTCGTCTG----TGATCGTCGTG----TAATTGC--------------------A-------------------------------------------------------------------------CTCGGAC-----ACG--ATGCTGATTGTTCT--------------------C--T-AT-TT----GCTTGTT------TCAGTGCTCGGCTGGTATCTGTACTATGGAATCTACTCGCTCTTCAAACAGATCSizeHit CountTotal NormTotal
No Reads
droBia1
TCGGATCCTCGG--------TGCCCTTCCTGAACGCCCTGCCAGTTATTTTGCTCTCTGTGCTGGTTCTTGGTAAGATTTAC-GTGACTCAG-------------------------------------------------CC--------------------ACATGCATATCATATATGT-----------G----CAT--GGCCACATATA--CATA--C-------------GCCCTGCTTCTGG---------------------------------------------------------------------------------------AAATGGGTATACAC-------AG---CT--------------CTTGTTGTGAAATTG-----------TGGATCCCCACTGCGCTTATCGCTCGGCGGT-------CGG----GGATCATTCTG----TAATTAG--------------------A-------------------------------------------------------------------------CTCGGAC-----ATG--GTGCTTATTGTTCT--------------------C--C-AT-TT----GCTCGTT------TCAGTGCTCGGATGGTATCTCTACTATGGCATCTACTCGCTCTTCAAGCAGATCSizeHit CountTotal NormTotal
No Reads
droTak1
TCGGATCCGCGA--------TGCCCTTCATGAGCGCCCTACCCATTTTATTGATCTCGGTGTCTGTTCTCCGTAAGTTTTTCAGTGACTCAT-------------------------------------------------TC--------------------TCTTGTATACCACAT---------------GTATTGATAT--A--CA--TATA--TATACAAAG--------A--ACTGATTCTGG---------------------------------------------------------------------------------------AAATGTGTATACAC-------AT---TA--------------ATTGTTGTGAAATTG-----------TGAATCC--------CTTATCGCGCGGGGCT-------GTG----TGATCTTACTG----TAATTAC--------------------C-------------------------------------------------------------------------ATCGGAC-----ACGCCGAGCTGATTGTTCT--------------------C--C-AT-TT----GCTCATT------TCAGTGCTCAGCTGGTATCTGTACTACGGGATCTACTCGCTCTTCAAGCAGATCSizeHit CountTotal NormTotal
No Reads
droEug1
CCAGAT---------------GCCCTTCTTAAGCGCAGTTCCAATTATCTTAATCTCGGTGGGAATTCTTGGTAAG--------TGACTCAT-------------------------------------------------TC--------------------ACTTGCACATCGTATACACAAGTTTTTCTTGTATGTATAT--G--CA--CGTACATA--GTATGTACATT--AGCGTTGTATCTGG---------------------------------------------------------------------------------------AAATGGGTATATAC-------AG----C--------------CTTGTTGTGAAATTG-----------TGGTTCCCCAATGCGCTTATCGCTTGTTGCT-------CTG----CGATCGTTTTG----TAATTGG--------------------A-------------------------------------------------------------------------CTCAGAC-----ATG--ATGTTAATT-TTTT--------------------C--T-AT-TT----GTTCGTT------TCAGTGCTCACATGGTATCTGTACTACGGCATCTACTCGCTCTTCAAGCAGATCSizeHit CountTotal NormTotal
No Reads
dm3
CCAGATCATCGG---AAATACATCTTTCCTGAGCGCTCTTCCAATCATTTTCGTGGATGTTGGCCTGCTCTGTAAG--------TGACTCACCAC-----------T----------------------------------------TC--------------------------------------------------------ATACA--TACA--TA---------------A--GCTCTATCTGG---------------------------------------------------------------------------------------AAATGGGTATACACAATACACACTGGCC--------------GTTGTTGCGAAATTG-----------TGGATCCCCATTGCGCTTATCGCTCGACGGT-------CTG----CGATCGTTCTA----TAATTGC--------------------G-------------------------------------------------------------------------CTTGGGC-----ACG--ATGCTTATTTTTCT--------------------C--C-AT-TC----GCTCGTT-----TTCAGTGCTGACCTGGTATCTCTACTACGGCATCTACTCGCTCTTCAAGCAGATCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACCTGGTATCTCTACTACGA.........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..AGATCATCGG---AAATACATCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........G---AAATACATCTTTCCTGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCATCTACTCGCTCTTCAAGCAGA..2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................TGGATGTTGGCCTGCTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................ATACATCTTTCCTGAGCGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGGTATCTCTACTACGGCAT......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTGGTATCTCTACTACGGCATCTAC..................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGCTCGACGGT-------CTG----CGATC...................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCTTATCGCTCGACGGT-------C..............................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
........................................................................................................................................................................................................................................................................................................................................................ATACACAATACACACTGGCC--------------...............................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TCTTTCCTGAGCGCTCTTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TCGG---AAATACATCTTTCCTGAGCGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTACTACGGCATCTACTCGCTCTT..........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................ATCTTTCCTGAGCGCTCTTCCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGGTATCTCTACTACGGCATCTAC..................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TATCGCTCGACGGT-------CTG----CGATCGT.................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACCTGGTATCTCTACTACGGCAT......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................TTGTTGCGAAATTG-----------TGGATC...............................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
......................TCTTTCCTGAGCGCTCTTCCAATCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................ACATCTTTCCTGAGCGCTCTTCCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.................ATACATCTTTCCTGAGCGCTCTTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTCTA----TAATTGC--------------------G-------------------------------------------------------------------------CTTGGGC-----........................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTCGACGGT-------CTG----CGATCGTTC...............................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
CCAGATCATCGG---AAATACATC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................TTTCCTGAGCGCTCTTCCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-TC----GCTCGTT-----TTCAGTG................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGACCTGGTATCTCTAG..............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................CCTGCTCTGTAAG--------TGACTCACCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................CGTGGATGTTGGCCTGCTCTTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............AAATACATCTTTCCTGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCTACTACGGCATCT....................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................GGT-------CTG----CGATCGTTCTA----TAATTGC--------------------G-------------------------------------------------------------------------C...................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..............................................ATTTTCGTGGATGTTGGCCTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
droSim2
CCAAGTCATCGG---AAGTACACCCTTCCTGAGCGCTCTTCCAATCATTTTGGTGGATGTGGGCCTGCTCGGTAAG--------TGAATCACCAC-----------T----------------------------------------TC--------------------------------------------------------GTACA--TACA--TA---------------A--GCTCTATCTGG---------------------------------------------------------------------------------------AAATGGGTATACAC-------ACTGTCC--------------GTTGTTGCGAAATTG-----------TGGATCCCCATTTCGCTTATCGCTCGGCGGT-------TTG----CGATCGTTCCG----TAATTGC--------------------G-------------------------------------------------------------------------CTGGTAC-----ACG--ATGCTTATTTTTCT--------------------CTCGTTT-TC----GCTCGTT------TCAGTGCTGACCTGGTATCTCTACTACGGCATCTACTCGCTCTTCAAGCAGATCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTACTACGGCATCTACTCGCTC............2513.00300000000010011000
........................................CCAATCATTTTGGTGGATGTGGGCCTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00202000000000000000
...............................................TTTTGGTGGATGTGGGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00220000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGGCATCTACTCGCTCTTCAAGCAGA..2812.00200000002000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCTACTACGGCATCTACTCGCTC............2611.00100000000000010000
......................CCCTTCCTGAGCGCTCTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010000000000000
......CATCGG---AAGTACACCCTTCCTGAGCGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000000000
..........................................AATCATTTTGGTGGATGTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100001000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTACTCGCTCTTCAAGCA....1911.00100000100000000000
..AAGTCATCGG---AAGTACACCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGGCATCTACTCGCTCTTCAAGCAA...2711.00100000000000010000
.............................................CATTTTGGTGGATGTGGGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000001000
.................GTACACCCTTCCTGAGCGCTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
..........................................................................................................T----------------------------------------TC--------------------------------------------------------GTACA--TACA--TA---------------A--GCTCTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGTATCTCTACTACGGCATCTA...................2411.00110000000000000000
................AGTACACCCTTCCTGAGCGCTCTTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000001000000000
...................................................GGTGGATGTGGGCCTGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010000000000000
.............................TGAGCGCTCTTCCAATCATTTTGGTGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
..........................TCCTGAGCGCTCTTCCAATCATTTTGGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTCTACTACGGCATCTA...................2111.00110000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTACTACGGCATCTACTCGCTCTT..........2711.00100000000001000000
................AGTACACCCTTCCTGAGCGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
droSec2
CCAAGTCATCGG---AAGTACACCCTTCCTGAGCGCTCTTCCACTCATTTTGGTGGATGTGGGCCTGCTCGGTAAG--------TGAATCACCAC-----------T----------------------------------------TC--------------------------------------------------------ATACA--TACA--TA---------------A--GCTCTATCTGG---------------------------------------------------------------------------------------A-ATGTGTATACAC-------ACTGGCC--------------GTTGTTGCGAAATTG-----------TGGATCCCCATTTTGCTTATCGCTCGACGGT-------TTG----CGATCGTTCTG----TAATTGC--------------------G-------------------------------------------------------------------------TTGGTAC-----ACG--ATGCTTATTTTTCT--------------------C--C-AT-TC----GCTCGTT------TCAGTGCTGACCTGGTATCTCTACTACGGCATCTACTCGCTCTTCAAGCAGATCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................GGTGGATGTGGGCCTGCTCGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
....................CACCCTTCCTGAGCGCTCTTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
.........................................................................................................................................................................................................................................................................................................................................................................GCC--------------GTTGTTGCGAAATTG-----------TGGATCCCCA...........................................................................................................................................................................................................................................................................................2811.0010100
...........................................................TGGGCCTGCTCGGTAAG--------TGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
.........................................CACTCATTTTGGTGGATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001
.................GTACACCCTTCCTGAGCGCTCTTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100
..............................................ATTTTGGTGGATGTGGGCCTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
.............................................CATTTTGGTGGATGTGGGCCTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
...........................................CTCATTTTGGTGGATGTGGGCCTGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000
...................................................GGTGGATGTGGGCCTGCTCGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
..AAGTCATCGG---AAGTACACCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
...........................CCTGAGCGCTCTTCCACTCATTTTGGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCATCTACTCGCTCTTC.........1911.0010001
...........................................................TGGGCCTGCTCGGTAAG--------TGAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTACGGCATCTACTCGCTCTTCAAGC.....2811.0011000
...AGTCATCGG---AAGTACACCCTTCCTGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100
.................................................TTGGTGGATGTGGGCCTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001
...................ACACCCTTCCTGAGCGCTCTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
..............................................ATTTTGGTGGATGTGGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
...................ACACCCTTCCTGAGCGCTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
droYak3
CCAGGTCATCGA---AACTACGCCATTCGTGGGCGCCCTTCCGATCATTTTGGTGGATGTGGGCCTGCTTGGTAAG--------TGAATCACCGCTTT----------------------------------CTT----------------------------------------------------------------------GTGCA--TACA--TA--C-------GCTGCA--GCTATATCTGG---------------------------------------------------------------------------------------AAATGGGTATACAC-------ATTCTCT--------------GTTATTGCGAAATTG-----------TTCATCCCCATTGCGCTTATCGCTCAACGGC-------TTG----CGATCGTACAG----TAATTGC--------------------A-------------------------------------------------------------------------CTTGGAC-----ACG--ATGCTAATGTATCA--------------------C--C-ATTTCACCATCTCGTT------TCAGTGCTGAGCTGGTATCTGTACTACGGCATCTACTCGCTCTTCAAGCAGATCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................CATTTTGGTGGATGTGGGCCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.00300000030000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTACGGCATCTACTCGCTCTTCA........2612.00200000000002
..............................................ATTTTGGTGGATGTGGGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200000020000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCTGTACTACGGCATCTA...................2011.00101000000000
...........................................ATCATTTTGGTGGATGTGGGCCTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
..............................................ATTTTGGTGGATGTGGGCCTGCTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
.....................GCCATTCGTGGGCGCCCTTCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTACTACGGCATCTACTCGCTC............2511.00101000000000
..........................................GATCATTTTGGTGGATGTGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
........TCGA---AACTACGCCATTCGTGGGCGCCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTACGGCATCTACTCGCT.............1911.00101000000000
......CATCGA---AACTACGCCATTCGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTGAGCTGGTATCTGTACTACGGC........................2711.00100000010000
..............................GGGCGCCCTTCCGATCATTTTGGTGGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGGCATCTACTCGCTCTTCAAGCA....2711.00101000000000
..............................................ATTTTGGTGGATGTGGGCCTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.............................................CATTTTGGTGGATGTGGGCCTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
.......................................TCCGATCATTTTGGTGGATGTGGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
......CATCGA---AACTACGCCATTCGTGGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGTACTACGGCATCTA...................1911.00101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGTACTACGGCATCTACTC................2211.00101000000000
..........................................GATCATTTTGGTGGATGTGGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTACTACGGCATCTACTC................2011.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTACTACGGCATCTAC..................1911.00110000000000
.........................................CGATCATTTTGGTGGATGTGGGCCTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGTACTACGGCATCTACTCG...............2311.00101000000000
...GGTCATCGA---AACTACGCCATTCGTGGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000
.............................................CATTTTGGTGGATGTGGGCCTGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
.................................CGCCCTTCCGATCATTTTGGTGGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGGTATCTGTACTACGG.........................2011.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTACGGCATCTACTCGCT.............2111.00101000000000
..........................................GATCATTTTGGTGGATGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100001000000
droEre2
CC-----------------------TTCCCGAACGCCCTTCCACTCCTGTTTGTAATTGTGGGCCTGCTCGGTAAG--------TGAATCACCAC-------------------------------------------------------------------------------------------------------GATA------CA--TATATATA--C------------A--TCTATATCTGG---------------------------------------------------------------------------------------AAATGGGTATACAC-------ATTGTTG--------------GTTGTTGCGAACTTG-----------TGGATCCCCATTGCGCTTATCGCTCAACGGT-------CTG----CGATCGTAACG----TAATTAC--------------------A-------------------------------------------------------------------------CTCGGAC-----ACG--ATGCTAAGTTTTCT--------------------C--C-AT-TT----GCTCGTT------TCAGTGCTGAGCTGGTATCTTTACTACGGCATCTACTCGCTCTTCAAGCAGATCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTGAGCTGGTATCTTTACTACGGC........................2713.0032000010
..............................GAACGCCCTTCCACTCCTGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTACGGCATCTACTCGCTCTTCAAGC.....2711.0011000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTACTCGCTCTTCAAGCAGATC2311.0010000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGGCATCTACTCGCTCTTCAA.......2411.0011000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGAGCTGGTATCTTTACTAC...........................2211.0010010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCT--------------------C--C-AT-TT----GCTCGTT------TCAG..................................................2211.0011000000
...........................................CTCCTGTTTGTAATTGTGGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
.....................................CTTCCACTCCTGTTTGTAATTGTGGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTACGGCATCTACTCGCTCTTCAAGC.....2811.0011000000
CC-----------------------TTCCCGAACGCCCTTCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
.......................................TCCACTCCTGTTTGTAATTGTGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGGCATCTACTCGCT.............1811.0010000010
...........................................CTCCTGTTTGTAATTGTGGGCCTGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACTACGGCATCTACTCGCT.............2111.0011000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCTGGTATCTTTACTAC...........................2011.0010000100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTTTACTACGGCATCTACTCG...............2311.0011000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATCTTTACTACGGCATCTACT.................2411.0011000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGGCATCTACTCGCTCTTC.........2111.0011000000
...........................CCCGAACGCCCTTCCACTCCTGTTTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAC--------------------A-------------------------------------------------------------------------CTCGGAC-----ACG--ATGCTAA............................................................................................................2111.0011000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTATCTTTACTACGGCATCTACTCGC..............2811.0011000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGCTGGTATCTTTACTACGGC........................2411.0010000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGTATCTTTACTACGGCATCT....................2311.0010000100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTACTCGCTCTTCAAGCAGAT.2311.0011000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGCATCTACTCGCTCTTCA........2111.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCATCTACTCGCTCTTCAAGCAG...2411.0011000000
..............................................CTGTTTGTAATTGTGGGCCTGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
................................................GTTTGTAATTGTGGGCCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
..........................TCCCGAACGCCCTTCCACTCCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000

Generated: 05/16/2015 at 08:57 PM