ID:

dvi_6658

 Coordinate:

scaffold_12875:13332023-13332173 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-23.1 -23.1 -22.3

Flybase annnotation

CDS [Dvir\GJ21988-cds]; exon [dvir_GLEANR_7305:2]; intron [Dvir\GJ21988-in]

Repeatable elements

NameClassFamilyStrand
(TC)nSimple_repeatSimple_repeat+
mature
star
  1. scaffold_12758:789591-789609 +
  2. scaffold_12822:813236-813254 +
  3. scaffold_12822:1083596-1083614 +
  4. scaffold_12823:1739455-1739473 +
  5. scaffold_12823:1944455-1944473 +
  6. scaffold_12875:4120634-4120652 +
  7. scaffold_12875:11571103-11571121 +
  8. dvi_6658  scaffold_12875:13332132-13332150 +
  9. scaffold_12928:517755-517773 +
  10. scaffold_12928:4100691-4100709 +
  11. scaffold_12963:1092749-1092767 +
  12. scaffold_12963:4031570-4031588 +
  13. scaffold_12963:4988773-4988791 +
  14. scaffold_13042:2059287-2059305 +
  15. scaffold_13042:5040613-5040631 +
  16. scaffold_13047:15207037-15207055 +
  17. scaffold_13049:3481115-3481133 +
  18. scaffold_13049:8366622-8366640 +
  19. scaffold_13049:18285488-18285506 +
  20. scaffold_13246:1926720-1926738 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------#############-------------------------------------
CCTGGGTAGCCAAGTATAAAGTGAATGATTCAGCACGGCAGCTGGAACAGTACCAGTTGGCCAACGGGCAGGATTACGTGCAGCGCGTAAGTTTCAAGATCAGCCAAATGTTGACTCATTCTGCTTGAGGAAGGGCGTTCATTTTATCCAGATCCAACTAATCTCTCTCTCTCTCTCTCTCTCTCTTCGTCTTGCTTCCAGGTGGCGAGCTTAAGGGAATCCCAATAGCAAAGGAGCCATAAGGATTAGGA
***********************************************************......(((..((((...(((.(((((.....(((((((..(((...((((......))))))))))))))....))))))))...))))...))).......................************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 V116
male body		 SRR060667
160_females_carcasses_total
 SRR060665
9_females_carcasses_total
 SRR060671
9x160_males_carcasses_total
 SRR060672
9x160_females_carcasses_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060666
160_males_carcasses_total
 SRR060680
 9xArg_testes_total
 SRR060681
Argx9_testes_total
 SRR060687
9_0-2h_embryos_total
 GSM1528803
follicle cells		 V053
head
 SRR060686
Argx9_0-2h_embryos_total
 SRR060689
160x9_testes_total
........................................................................................................................................................................................................................GAATCCCAATAGCAAAGGAGCCA............ 23 0 1 3.00 3 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................GCCAACGGGCAGGATTACGTG........................................................................................................................................................................... 21 0 1 2.00 2 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................................................AGCAAAGGAGCCATTAGGA...... 19 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................GTGGCGAGCTTAAGGGAATCCCAATA........................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................GTGACGAGCTTAAGGGAATCCCAATA........................ 26 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
................................................................................................................................................................................................................GCTTAAGGGAATCCCAATAG....................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................ATGCTGACTCATTCTGCTTGA........................................................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................CATGTGGCGAGCTTAAGGGA................................. 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GGAATCCCGATGGCAAAGGAGCCA............ 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................GCAAAGGAGCCATAAGGATTAGGA 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................AGCAAAGGAGCCATAAGGATTAGG. 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................GTGGCGAGCTTAAGGGAATCCCAAT......................... 25 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................................ATAGCAAAGGAGCCATAAGG....... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................AAAGGAGCCATAAGGATTAGGA 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................TGAGTAAGGGCGTCCACTTTAT........................................................................................................ 22 3 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................AAGGAGCCATAAGGATTAGGA 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................GAATCCCAATAGCAAAGG................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................TAGCAAAGGAGCCATAAGG....... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................GTGCAGCGCGTAAGTTTCAAGATCAGC................................................................................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................ATGTGGCGAGCTTAAGGGAATCCCAATA........................ 28 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................GAATCCCAATAGCAAAGGAGC.............. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................TAGCAAAGGAGCCATAAGGATTAGGA 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................GGCGAGCTTAAGGGAATCCCAATA........................ 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................GTGGCGAGCTTAACCGAAT............................... 19 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.........CGGAGTATAACGTGAATGAT.............................................................................................................................................................................................................................. 20 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.....................................................................................................................................................................................................TCATGTGGCGAGCTTAAG.................................... 18 2 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................ACGGCAGTTTGAACAGTACA..................................................................................................................................................................................................... 20 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...................................................................................................................................................................................................TATCATGTGGCGAGCTTAAG.................................... 20 3 8 0.13 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................GTTGCAAGATCACCCAAAAG............................................................................................................................................. 20 3 9 0.11 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..TGGGTAGCCACGTATGGA....................................................................................................................................................................................................................................... 18 3 15 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
...............................................................................................................................................................AATCTCTCTCTCTCTCTCT......................................................................... 19 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.CTGGGTAGCTATGTATGAA....................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................GCTTAAGGGAATCCCAATGGG...................... 21 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

GGACCCATCGGTTCATATTTCACTTACTAAGTCGTGCCGTCGACCTTGTCATGGTCAACCGGTTGCCCGTCCTAATGCACGTCGCGCATTCAAAGTTCTAGTCGGTTTACAACTGAGTAAGACGAACTCCTTCCCGCAAGTAAAATAGGTCTAGGTTGATTAGAGAGAGAGAGAGAGAGAGAGAGAAGCAGAACGAAGGTCCACCGCTCGAATTCCCTTAGGGTTATCGTTTCCTCGGTATTCCTAATCCT
*************************************************************************......(((..((((...(((.(((((.....(((((((..(((...((((......))))))))))))))....))))))))...))))...))).......................*********************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528803
follicle cells		 V116
male body		 SRR060667
160_females_carcasses_total
 SRR060679
140x9_testes_total
 SRR060675
140x9_ovaries_total
..................................................................................................................................................................................................................................TCGATTCCTTGGTATTCC....... 18 2 7 0.29 2 2 0 0 0 0
.......................................................................................................................................................................................AGAAGCAGCATGAAGGTAC................................................. 19 3 6 0.17 1 0 1 0 0 0
..................................................ATGGTGAACCGGTTTCCCG...................................................................................................................................................................................... 19 2 9 0.11 1 0 0 1 0 0
..............................................................................................................................................................................GAGAGAGAGAGAAGCAGAGCG........................................................ 21 1 16 0.06 1 0 0 0 1 0
......................................GTCGAACTCTTCATGGTCA.................................................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12875:13331973-13332223 + dvi_6658 CCTGGGTA---------------GCCA---------------------------AGTATA---AAGTGAATGATTCAGCACGGCAGCTGGAACAGTACCAGTTGGCCAACGGGCAGGATT--A---CGTGCAGCGC---GTAAGTTTCAAGATCAGCCA----------AA-T-GTTGACTCATTCTGC---------------TTGAGGA----------------------------------------------AGGGCGTTC-ATTTTATCC--AG----ATCCAACTAATCTCTCTCTCTCTCTCTCTCTCTCTTC-----GTCTTGCTTCCAGGTGGCGAGCTTAAGGGAA--TCCCAATA------------------------GCA---------------------AAGGAGCCATAAGGATTAGGA-------------------
droMoj3 scaffold_6496:20628341-20628643 + GCTGATCTGAA-------GTC--------------------------------AAGTATA---AAGTGCGTGATTCAGCAGCGCAGTGAA-ACAGTTTCAACTGGCCAACGGGCAG---G--A---TTGGTAGCAGCGCGTAAG-------CTCCGATATGGAAC---TAA-CCATGA-TTCATTCAGCTTAGAATAGTTTCATCTCTATTACTCTTCATATCATCATTGCCCGGAGTTGACCCCGTACTCTATATATAATTCCAT-TCCTTAT--ATGAT---TCATAACTAATG------------------ATCTTTA-----TTTTGC-TTTCAGGTGGCGGGCTTAAAGACG--AT-------------AT--------TCCAGCAGCA---------------------AGC-----GAAGCCAT----------ATTACAATAGGATA
droGri2 scaffold_15245:7019964-7020205 - GCTGGGCT---------------GGCCGCTG----------------------AAGTATA---AAGTGCGTGATTCAGCACAGCAGCTGCAACAGTCACAGTTTACCAACGGGCAGGGCAAGATTACATGCAG-----CGTAAGTTTGAAGATTAGATC----------AA---GTTGGATTATTGTAT---------------CTCTAAT----------------------------------------------TAAATATTT-ACCTTAT--GTAAA---TC-AAACTAAT---------------TATCTTTTTCT-----ATATTATTTACAGGTGGCGGGCTTGAAGTTAAAAC--------------C--------CCGAAAATCT---------------------GGC-----ATATCATTTAGAA-------------------
dp5 3:17485125-17485398 + ACTGGGTGTGA-------GCCATCGCATATGAGAGGCCACCATACAAGTATACGAGTATA---AAGTGCGTGATTCAGTGGAGCAGCTGGGGCAGTTACCGTCGAAC-------AGGGCA--G---GAAACAGCACGCTGTAAG-------ATCCGCAAACGAAACTCTCGCAAAATG-----------------------------------------------------------------------------------------------CTT---T---GGACCTATTGGACC---AC------TAA--CTGATTTCAT---ATCTCA-TTTCAGGTGGCGCGCTTGAAGATATATTCCTACGTATGTGGAT--------CTGTACGATATTTTGTCAGCATTGCCGTAACGTT-----GGATAAGTT-----------------------
droPer2 scaffold_31:306202-306453 - ACTGGGTGTGA-------GCCATCGCATATGAGAGGCCACCATACAAATATACGAGTATA---AAGTGCGTGATTCAGTGGAGCAGCTGGGGCAGTTACCGTCGAAC-------AGGGCA--G---GAAACAGCACGCTGTAAG-------ATCCGCAAACGAAACTCTCGCAAAATG-----------------------------------------------------------------------------------------------CTT---T---GGACCAATTGGACC---AC------TAA--CTGATTTCAT---ATCTCA-TTTCAGGTGGCGCGCTTGAAGATATATTCCTACGTATGTGGAT--------CTGTACGAAA---------------------T----------TTTGTCAGCA-------------------
droAna3 scaffold_13266:6739022-6739070 - -------------------------------------------------------GTATA---AAGTGCGTGATTCAGTGGAGCAGCTGG-CCAGTAGCAGCTGGAC-------A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396423:286209-286273 - CCTTGGTG---------------GTCAGGTC------------------------GTATA---AAGTGCGTGATTCAGTGGAGCAGCTGG-CCAGTAGCAGCTGGAC-------A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302476:2377994-2378226 - CCTGGGCTTGGGGCGTGGGCCTTGGCCGGTC------------------------ATATA---AAGTGCGTGATTCAGCGGAGCAGCTGGGGCAGTAACCATTGGGC-------TCTCCG--A---CATCCAGCACGCTGTAAG-------ATCCGCGGACGCGT---TG-----------------------------------------------------------------------------------------------------------------ACCACAACTGATGCAATAA------CTTCTCTGGTTTC-----GCTTTG-TTACAGGTGGCGCGCTTGAAGATT--ACCAGACGAGTGTGGAT--------CTGAGCAGCAGTGTG-------------------CCGCCGCCAGCATAGCCA-------------------
droFic1 scf7180000453851:1249188-1249435 - TCTGGGCGTGG-------ACCTTGCCAGGTG------------------------GTATA---AATTGCGTGATTCAGTGGAGCAGCTGG-GCAGTGACCATTGAGC-------AATCTG--A---CTCTCAGCACGCCGTAAG-------ATCCGCATTCGCGT---TTG-TCATTA-----------------------------------------------------------------------------------------------CCA--AA---ACCACAACTAATGCAATAC------CATCTCGTGTTTC-----GTTTCG-TTTTAGGTGGCGCGCCTGAAGATT--TCCAGACGATTGTGGAT--------CGGAGCATCA---------------------GTC-----GAATGAGTCGTGATCCGTATCTGAATC-GAAA
droEle1 scf7180000491201:850080-850315 + TCTGGGCGTGG-------ATCTGGCCAGGGGGT------------------ATGGGTATA---AAGTGCGTGATTCAGTGGAGCAGCTGG-TCAGTAACCATTGGGC-------AATCAT--A---CTCTCAGCACGCTGTAAG-------ATCCGCAGTCGGGC---TTA-AAATCA-----------------------------------------------------------------------------------------------CCA--AA---ACCGCAACTGATGCAATAC------CATCTCTCGTTTC-----GATTCG-TTTTAGGTGGCGCGCTTGAAGAAT--ACCAGACTATTGTGGAT--------CGGAGCATCA---------------------TTT-----GGATGAGTCGTGA-------------------
droRho1 scf7180000773652:126843-127080 + TCTGGGCGTGG-------GCCTTGCCAGGTC------------------------GTATA---AAGTGCGTGACTCAGTGGAGCAGCTGG-GCAGTAACCATTGGGC-------AATCAG--A---CTCTCAGCACGCTGTAAG-------ATTCGCAGTCTGGT---TAA-TATGTA-----------------------------------------------------------------------------------------------CCA--AA---ACCACAACTGATGCAATAT------CATCTCTTCTTTC-----ATCTCG-ATTTAGGTGGCGCGCTTGAAGAAT--ACCAGACGATTGTGGATTTGTGGATCGGAGCATCA---------------------GTC-----GGATGAGTCGAGA-------------------
droBia1 scf7180000301506:1704781-1705033 - GCTGGGCGTGG-------GCCTTGCCAGGTGCTG------------------GCGGTATA---AAGTGCGTGAGTCAGTGGAGCAGCTGG-GCAGTAACCATTGGGC-------ATTCCG--A---CTCTCAGCACGCTGTAAG-------ATCCGCAATCGCGT---TTA-TAATTC---------------------------------------------------------------------------------CTTCGTTAACCG--CCAGAAAACCACCACAACTGATGCAATAC------CATCTCGGGTTTC-----GTTTCG-TTTTAGGTGGCGCGCTTGAAGATT--ACCAGACGAGTGTGGAT--------CCGAGCATCA---------------------ACC-----GGATGAGTCGCGA-------------------
droTak1 scf7180000411009:58143-58371 - TCTGGGCGTGG-------GCCTTGCCAGGTG------------------------GTATA---AAGTGCGTGAGTCAGGG-GGCAGCTGG-TCAGTTACCATTGGGC-------ATTCCG--A---CTCTCAGCACGCCGTAAG-------ATCCTCAATCGCGT---GAA-TAATTA-----------------------------------------------------------------------------------------------CCA--GA---ATCGCAACTGATGCAATAC------CATCACTCGTTTC-----GCTTCG-TTTTAGGTGGCGCGCCTGAAGATT--ACCAGACCATTGTGGAT--------CCGAGCATCA---------------------ACC-----GGATGAGTCGGGA-------------------
droEug1 scf7180000409183:677983-678223 + TCTGGGCGTGG-------GCCTTGCCAGGTGGTAGACT--CAT----------ACGTATA---AAGTGCGTGATTCAGTGGACCAGCTGG-GCAGTTACCATTGGGC-------ATTCCG--A---CTCTCAGCACGCAGTAAG-------ATCCGCAATCGCGG---TTA-TAGTTA-----------------------------------------------------------------------------------------------CCA---A---ACAACAACTGATGCAATAC------CATCTCTTGTTTC-----GTCTCG-TTTTAGGTGGCGCGCTTGAAGATT--ACCAGACGATTGTGGAT--------CGGAGCATCA---------------------GTC-----GGATGAGTCGTGA-------------------
dm3 chr2R:5028921-5028999 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTCGTTTC-----ATTTCG-TTTAAGGTGGCGCGCTTGAAGATT--AACAGATGATTGTGGAT--------CGGAGCACCA---------------------GTC-----GGATGAGTC-----------------------
droSim2 2r:5838430-5838664 + dsi_1104 TCTGGGCGTGG-------GCCTTGCCAGGTGGT----------------------GTGTACATAAGTGCGTGATTCAGTGGAGCAGCTGG-GCAGTTACCATTGGGC-------ACTC---------TCTCAGCACGCTGTAAG-------ATCCGCGATCGCGG---TAG-AAATTG-----------------------------------------------------------------------------------------------CCA---T---ACCACAATTGATGCAATAA------CAACTCTCGTTTCATTTCGTTTCG-TTTAAGGTGGCGCGCTTGAAGATT--ACCAGACGATTGTGGAT--------CGGAGCACCA---------------------GTC-----GGATGAGTCGCGA-------------------
droSec2 scaffold_1:2667856-2668091 + TCTGGGCGTGG-------GCCTTGCCAGGTGGT----------------------GTGTACATAAGTGCGTGATTCAGTGGAGCAGCTGG-GCAGTTACCATTGGGC-------ACTC---------TCTCAGCACGCTGTAAG-------ATCCGCGATCGCGG---TAGCAAATTG-----------------------------------------------------------------------------------------------CCA---T---ACCACAATTGATGCAATAA------CAACTCTCGTTTCATTTCGTTTCG-TTTAAGGTGGCGCGCTTGAAGATT--ACCAGACGATTGTGGAT--------CGGAGCACCA---------------------GTC-----GGATGAGTCGCGA-------------------
droYak3 2L:17690555-17690781 + TCTGGGCGTGG-------GCCTTGCCAGGTG------------------------GTGTACATAAGTGCGTGATTCAGTGGAGCAGCTGG-GCAGTTACCATTGAGC-------ACTC---------TCTCAACACGCTGTAAG-------ATCCGCTATAGCGT---TAA-T-ATTA-----------------------------------------------------------------------------------------------CCT---T---ACCACAACAGATGCAATAA------CATCTCTTGTTTG-----ATTTCA-TTTAAGGTGGCGTGCTTGAAGATT--ACCATATGATTGTGGAT--------CGGAGCACCA---------------------GTC-----GGATGAGTCGCGA-------------------
droEre2 scaffold_4929:17620778-17621005 - TCTGGGCGTGG-------GCCTTGCCAGGTG------------------------GTGTACATAAGTGCGTGATTCAGTGGAGCAGCTGG-GCAGTTACCATTGGGC-------ATTG---------TCTCAACACGCTGTAAG-------ATCCGCGATCGCGT---TGA-TAATTG-----------------------------------------------------------------------------------------------CTA---T---ATCACAATTGAGGCAATAA------CGTCTCTCGTTTC-----ATTTCA-TTTAAGGTGGCGCGCTTGAAGATT--ACCAGACGATTTTGGAT--------CGGAGCACCA---------------------GAC-----GGATGAGTCGCGA-------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
CCTGGGTA---------------GCCA---------------------------AGTATA---AAGTGAATGATTCAGCACGGCAGCTGGAACAGTACCAGTTGGCCAACGGGCAGGATT--A---CGTGCAGCGC---GTAAGTTTCAAGATCAGCCA----------AA-T-GTTGACTCATTCTGC---------------TTGAGGA----------------------------------------------AGGGCGTTC-ATTTTATCC--AG----ATCCAACTAATCTCTCTCTCTCTCTCTCTCTCTCTTC-----GTCTTGCTTCCAGGTGGCGAGCTTAAGGGAA--TCCCAATA------------------------GCA---------------------AAGGAGCCATAAGGATTAGGA-------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................GAA--TCCCAATA------------------------GCA---------------------AAGGAGCCA...............................2313.003000000000000000102000000000000000000000000000000000000000000000
........................................................................................................GCCAACGGGCAGGATT--A---CGTG.....................................................................................................................................................................................................................................................................................................................................2112.002000000000000000000000100000000100000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................GTGGCGAGCTTAAGGGAA--TCCCAATA------------------------................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................GCTTAAGGGAA--TCCCAATA------------------------G...............................................................2011.001000000000000000100000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................GCA---------------------AAGGAGCCATAAGGATTAGGA-------------------2411.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................A------------------------GCA---------------------AAGGAGCCATAAGGATTAGG....................2411.001000000000000000000000010000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................GTGGCGAGCTTAAGGGAA--TCCCAAT.........................................................................................2511.001000000000000000010000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................ATA------------------------GCA---------------------AAGGAGCCATAAGG..........................2011.001000000000000000000000000000000000000000000000000000000000000010
.........................................................................................................................................................................................................................................................................................................................................................................................................A---------------------AAGGAGCCATAAGGATTAGGA-------------------2211.001000000000000000000000100000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................AAGGAGCCATAAGGATTAGGA-------------------2111.001000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................................................................................................................................................................................................................................................................GAA--TCCCAATA------------------------GCA---------------------AAGG....................................1811.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TA------------------------GCA---------------------AAGGAGCCATAAGG..........................1911.001000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................................GTGCAGCGC---GTAAGTTTCAAGATCAGC..........................................................................................................................................................................................................................................................................................................2711.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................GAA--TCCCAATA------------------------GCA---------------------AAGGAGC.................................2111.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TA------------------------GCA---------------------AAGGAGCCATAAGGATTAGGA-------------------2611.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................GGCGAGCTTAAGGGAA--TCCCAATA------------------------................................................................2411.001000000000000000000000100000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................AATCTCTCTCTCTCTCTCT................................................................................................................................................19200.051000000000000000001000000000000000000000000000000000000000000000
droMoj3
GCTGATCTGAA-------GTC--------------------------------AAGTATA---AAGTGCGTGATTCAGCAGCGCAGTGAA-ACAGTTTCAACTGGCCAACGGGCAG---G--A---TTGGTAGCAGCGCGTAAG-------CTCCGATATGGAAC---TAA-CCATGA-TTCATTCAGCTTAGAATAGTTTCATCTCTATTACTCTTCATATCATCATTGCCCGGAGTTGACCCCGTACTCTATATATAATTCCAT-TCCTTAT--ATGAT---TCATAACTAATG------------------ATCTTTA-----TTTTGC-TTTCAGGTGGCGGGCTTAAAGACG--AT-------------AT--------TCCAGCAGCA---------------------AGC-----GAAGCCAT----------ATTACAATAGGATASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................................................................................................................................................................................................................................................................................................................................................................................GCAGCA---------------------AGC-----GAAGCCAT----------AT............1911.001000100
....................................................................................................ACTGGCCAACGGGCAG---G--A---T........................................................................................................................................................................................................................................................................................................................................1911.001100000
............................................................................................................................................................................................................................................................................................................................................................TTAAAGACG--AT-------------AT--------TCCAGCAGCA---------------------AGC-----GA..............................2811.001000001
droGri2
GCTGGGCT---------------GGCCGCTG----------------------AAGTATA---AAGTGCGTGATTCAGCACAGCAGCTGCAACAGTCACAGTTTACCAACGGGCAGGGCAAGATTACATGCAG-----CGTAAGTTTGAAGATTAGATC----------AA---GTTGGATTATTGTAT---------------CTCTAAT----------------------------------------------TAAATATTT-ACCTTAT--GTAAA---TC-AAACTAAT---------------TATCTTTTTCT-----ATATTATTTACAGGTGGCGGGCTTGAAGTTAAAAC--------------C--------CCGAAAATCT---------------------GGC-----ATATCATTTAGAA-------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
dp5
ACTGGGTGTGA-------GCCATCGCATATGAGAGGCCACCATACAAGTATACGAGTATA---AAGTGCGTGATTCAGTGGAGCAGCTGGGGCAGTTACCGTCGAAC-------AGGGCA--G---GAAACAGCACGCTGTAAG-------ATCCGCAAACGAAACTCTCGCAAAATG-----------------------------------------------------------------------------------------------CTT---T---GGACCTATTGGACC---AC------TAA--CTGATTTCAT---ATCTCA-TTTCAGGTGGCGCGCTTGAAGATATATTCCTACGTATGTGGAT--------CTGTACGATATTTTGTCAGCATTGCCGTAACGTT-----GGATAAGTT-----------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........................................................................................GCAGTTACCGTCGAAC-------AGGGCA--G---GAAA.....................................................................................................................................................................................................................................................................................................................................2711.0010000001000
..................................................................................................................AGGGCA--G---GAAACAGCACG..............................................................................................................................................................................................................................................................................................................................1811.0010000100000
................................................................................................................................................................................................................................................................................................................................................................................................................CAGCATTGCCGTAACGTT-----GG..............................2011.0010100000000
..TGGGTGTGA-------GCCATCGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010000
.......................................................................................................................................................................................................................................................................................................................................TCTCA-TTTCAGGTGGCGCGCTTGAA......................................................................................................2511.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................GATATTTTGTCAGCATTGCC.............................................2011.0010010000000
..............................................................................................................................................................................................................................................................................................................................................................GAAGATATATTCCTACGTATGTGGAT--------C......................................................................2711.0010100000000
................................................................AGTGCGTGATTCAGTGGAGCA..................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................ATTTTGTCAGCATTGCCGTAAC........................................2211.0010100000000
..................................................................................................................................................................................................................................................................................TT---T---GGACCTATTGGACC---AC------TAA--CTGAC.........................................................................................................................................2711.0010010000000
droPer2
ACTGGGTGTGA-------GCCATCGCATATGAGAGGCCACCATACAAATATACGAGTATA---AAGTGCGTGATTCAGTGGAGCAGCTGGGGCAGTTACCGTCGAAC-------AGGGCA--G---GAAACAGCACGCTGTAAG-------ATCCGCAAACGAAACTCTCGCAAAATG-----------------------------------------------------------------------------------------------CTT---T---GGACCAATTGGACC---AC------TAA--CTGATTTCAT---ATCTCA-TTTCAGGTGGCGCGCTTGAAGATATATTCCTACGTATGTGGAT--------CTGTACGAAA---------------------T----------TTTGTCAGCA-------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................................................AGTTACCGTCGAAC-------AGGGCA--G---GA.......................................................................................................................................................................................................................................................................................................................................2311.001010000
..............................................................................................GTTACCGTCGAAC-------AGGGCA--G---GAAA.....................................................................................................................................................................................................................................................................................................................................2411.001010000
.....................................................................................................................................................................................................................................................................................................................................................................TATTCCTACGTATGTGGAT--------CTGTACGA...............................................................2711.001100000
....................................................................................................................................................................................................................................................................................................................................................................ATATTCCTACGTATGTGGAT--------.......................................................................2011.001010000
.................................................................................................................................ACAGCACGCTGTAAG-------ATCCG...........................................................................................................................................................................................................................................................................................................2011.001100000
droAna3
-------------------------------------------------------GTATA---AAGTGCGTGATTCAGTGGAGCAGCTGG-CCAGTAGCAGCTGGAC-------A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................ATA---AAGTGCGTGATTCAGTGG......................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.................................................................GTGCGTGATTCAGTGGAGCAG.................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...........................................................A---AAGTGCGTGATTCAGTGGAGCAGC................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
droBip1
CCTTGGTG---------------GTCAGGTC------------------------GTATA---AAGTGCGTGATTCAGTGGAGCAGCTGG-CCAGTAGCAGCTGGAC-------A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
CCTGGGCTTGGGGCGTGGGCCTTGGCCGGTC------------------------ATATA---AAGTGCGTGATTCAGCGGAGCAGCTGGGGCAGTAACCATTGGGC-------TCTCCG--A---CATCCAGCACGCTGTAAG-------ATCCGCGGACGCGT---TG-----------------------------------------------------------------------------------------------------------------ACCACAACTGATGCAATAA------CTTCTCTGGTTTC-----GCTTTG-TTACAGGTGGCGCGCTTGAAGATT--ACCAGACGAGTGTGGAT--------CTGAGCAGCAGTGTG-------------------CCGCCGCCAGCATAGCCA-------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TCTGGGCGTGG-------ACCTTGCCAGGTG------------------------GTATA---AATTGCGTGATTCAGTGGAGCAGCTGG-GCAGTGACCATTGAGC-------AATCTG--A---CTCTCAGCACGCCGTAAG-------ATCCGCATTCGCGT---TTG-TCATTA-----------------------------------------------------------------------------------------------CCA--AA---ACCACAACTAATGCAATAC------CATCTCGTGTTTC-----GTTTCG-TTTTAGGTGGCGCGCCTGAAGATT--TCCAGACGATTGTGGAT--------CGGAGCATCA---------------------GTC-----GAATGAGTCGTGATCCGTATCTGAATC-GAAASizeHit CountTotal NormTotal
No Reads
droEle1
TCTGGGCGTGG-------ATCTGGCCAGGGGGT------------------ATGGGTATA---AAGTGCGTGATTCAGTGGAGCAGCTGG-TCAGTAACCATTGGGC-------AATCAT--A---CTCTCAGCACGCTGTAAG-------ATCCGCAGTCGGGC---TTA-AAATCA-----------------------------------------------------------------------------------------------CCA--AA---ACCGCAACTGATGCAATAC------CATCTCTCGTTTC-----GATTCG-TTTTAGGTGGCGCGCTTGAAGAAT--ACCAGACTATTGTGGAT--------CGGAGCATCA---------------------TTT-----GGATGAGTCGTGA-------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TCTGGGCGTGG-------GCCTTGCCAGGTC------------------------GTATA---AAGTGCGTGACTCAGTGGAGCAGCTGG-GCAGTAACCATTGGGC-------AATCAG--A---CTCTCAGCACGCTGTAAG-------ATTCGCAGTCTGGT---TAA-TATGTA-----------------------------------------------------------------------------------------------CCA--AA---ACCACAACTGATGCAATAT------CATCTCTTCTTTC-----ATCTCG-ATTTAGGTGGCGCGCTTGAAGAAT--ACCAGACGATTGTGGATTTGTGGATCGGAGCATCA---------------------GTC-----GGATGAGTCGAGA-------------------SizeHit CountTotal NormTotal
No Reads
droBia1
GCTGGGCGTGG-------GCCTTGCCAGGTGCTG------------------GCGGTATA---AAGTGCGTGAGTCAGTGGAGCAGCTGG-GCAGTAACCATTGGGC-------ATTCCG--A---CTCTCAGCACGCTGTAAG-------ATCCGCAATCGCGT---TTA-TAATTC---------------------------------------------------------------------------------CTTCGTTAACCG--CCAGAAAACCACCACAACTGATGCAATAC------CATCTCGGGTTTC-----GTTTCG-TTTTAGGTGGCGCGCTTGAAGATT--ACCAGACGAGTGTGGAT--------CCGAGCATCA---------------------ACC-----GGATGAGTCGCGA-------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TCTGGGCGTGG-------GCCTTGCCAGGTG------------------------GTATA---AAGTGCGTGAGTCAGGG-GGCAGCTGG-TCAGTTACCATTGGGC-------ATTCCG--A---CTCTCAGCACGCCGTAAG-------ATCCTCAATCGCGT---GAA-TAATTA-----------------------------------------------------------------------------------------------CCA--GA---ATCGCAACTGATGCAATAC------CATCACTCGTTTC-----GCTTCG-TTTTAGGTGGCGCGCCTGAAGATT--ACCAGACCATTGTGGAT--------CCGAGCATCA---------------------ACC-----GGATGAGTCGGGA-------------------SizeHit CountTotal NormTotal
No Reads
droEug1
TCTGGGCGTGG-------GCCTTGCCAGGTGGTAGACT--CAT----------ACGTATA---AAGTGCGTGATTCAGTGGACCAGCTGG-GCAGTTACCATTGGGC-------ATTCCG--A---CTCTCAGCACGCAGTAAG-------ATCCGCAATCGCGG---TTA-TAGTTA-----------------------------------------------------------------------------------------------CCA---A---ACAACAACTGATGCAATAC------CATCTCTTGTTTC-----GTCTCG-TTTTAGGTGGCGCGCTTGAAGATT--ACCAGACGATTGTGGAT--------CGGAGCATCA---------------------GTC-----GGATGAGTCGTGA-------------------SizeHit CountTotal NormTotal
No Reads
dm3
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTCGTTTC-----ATTTCG-TTTAAGGTGGCGCGCTTGAAGATT--AACAGATGATTGTGGAT--------CGGAGCACCA---------------------GTC-----GGATGAGTC-----------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................ATGATTGTGGAT--------CGGAGCACC..............................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000001010000000
..............................................................................................................................................................................................................................................................................................................................................................................GATTGTGGAT--------CGGAGCACC..............................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000002000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................CGGAGCACCA---------------------GTC-----GGATGAGT........................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................AGATGATTGTGGAT--------CGGAGC.................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000
..................................................................................................................................................................................................................................................................................................................................................................................GTGGAT--------CGGAGCACCA---------------------GT......................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................ATTGTGGAT--------CGGAGCACCA---------------------........................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................GATTGTGGAT--------CGGAGCACCA---------------------G.......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
................................................................................................................................................................................................................................................................................................................................................AAGGTGGCGCGCTTGAAGATT--T...............................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.............................................................................................................................................................................................................................................................................................................................................................................TGATTGTGGAT--------CGGAGCAC...............................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................T--------CGGAGCACCA---------------------GTC-----GGATGAG.........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................AACAGATGATTGTGGAT--------CGGA...................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
................................................................................................................................................................................................................................................................................................................................................................................TTGTGGAT--------CGGAGCACCA---------------------GTC-----GG..............................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................AACAGATGATTGTGGAT--------CGGAGC.................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.................................................................................................................................................................................................................................................................................................................................................................................TGTGGAT--------CGGAGCACCA---------------------........................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................C-----ATTTCG-TTTAAGGTGGCGC.............................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................GGAGCACCA---------------------GTC-----GGATGAGT........................2011.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................TGTGGAT--------CGGAGCACCA---------------------GTC-----G...............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................T--AACAGATGATTGTGGAT--------CGG....................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................GGCGCGCTTGAAGATT--AAC.............................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
........................................................................................................................................................................................................................................................................................................................................................................ACAGATGATTGTGGAT--------CGGAG..................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................GATTGTGGAT--------CGGAGCACCA---------------------GTC-----G...............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................CGGAGCACCA---------------------GTC-----GGATGAGC........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................TT--AACAGATGATTGTGGAT--------CG.....................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................TGTGGAT--------CGGAGCACCA---------------------GTC-----GGATGA..........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TGATTGTGGAT--------CGGAGCACCA---------------------G.......................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..............................................................................................................................................................................................................................................................................................................................................................................GATTGTGGAT--------CGGAGCACCA---------------------GT......................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................AGCACCA---------------------GTC-----GGATGAGTC-----------------------1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................T--AACAGATGATTGTGGAT--------CGGAGC.................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................TC-----ATTTCG-TTTAAGGTGGCGC.............................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................GAT--------CGGAGCACCA---------------------GTC-----GGATG...........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................GATTGTGGAT--------CGGAGCACCA---------------------........................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................ATTTCG-TTTAAGGTGGCGCG............................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..........................................................................................................................................................................................................................................................................................................................................................................AGATGATTGTGGAT--------CGGAG..................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................ACAGATGATTGTGGAT--------CGG....................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
droSim2
TCTGGGCGTGG-------GCCTTGCCAGGTGGT----------------------GTGTACATAAGTGCGTGATTCAGTGGAGCAGCTGG-GCAGTTACCATTGGGC-------ACTC---------TCTCAGCACGCTGTAAG-------ATCCGCGATCGCGG---TAG-AAATTG-----------------------------------------------------------------------------------------------CCA---T---ACCACAATTGATGCAATAA------CAACTCTCGTTTCATTTCGTTTCG-TTTAAGGTGGCGCGCTTGAAGATT--ACCAGACGATTGTGGAT--------CGGAGCACCA---------------------GTC-----GGATGAGTCGCGA-------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................................................................................................................................................................................................................................................................................................................................................................ATT--ACCAGACGATTGTGGAT--------C......................................................................2115.00511210000000000000
..................................................................................................................................................................................................................................................................................................................................................................ATT--ACCAGACGATTGTGGAT--------CGGAGC.................................................................2612.00200200000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................CACCA---------------------GTC-----GGATGAGTCGC.....................1912.00201100000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................ACCA---------------------GTC-----GGATGAGTCGC.....................1812.00200200000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................GAT--------CGGAGCACCA---------------------GTC-----GGATGAGTCGC.....................2712.00202000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................GCACCA---------------------GTC-----GGATGAGTCGC.....................2012.00201000000000001000
.........................................................................................................................................................................................................................................................................................................................................................................CAGACGATTGTGGAT--------CGGAGC.................................................................2112.00200001010000000000
......................................................................................................................................................................................................................................................................................................................................................................................................ACCA---------------------GTC-----GGATGAGTCGCGA-------------------2012.00220000000000000000
................................................................................................................................CTCAGCACGCTGTAAG-------ATCCGCGA........................................................................................................................................................................................................................................................................................................2411.00101000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................CACCA---------------------GTC-----GGATGAGTCGCG....................2011.00101000000000000000
................................................................................................................................CTCAGCACGCTGTAAG-------ATCCG...........................................................................................................................................................................................................................................................................................................2111.00101000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................ACCAGACGATTGTGGAT--------CGGA...................................................................2111.00100100000000000000
.................................................................................................................................................................................................................................................................................................................................................................GATT--ACCAGACGATTGTGGAT--------.......................................................................2111.00100100000000000000
................................................................................................................................................................................................................................................................................................................................................................................................CGGAGCACCA---------------------GTC-----GGATG...........................1811.00100100000000000000
...........................................................................................................................................................................................................................................................................................................................................................................GACGATTGTGGAT--------CGGAGCACC..............................................................2211.00100000100000000000
...............................................................................................................................................................................................................................................................................................................................................................................ATTGTGGAT--------CGGAGCACCA---------------------GTC-----GGA.............................2511.00100000010000000000
.......................................................................................................................................................................................................................................................................................................................................................................................T--------CGGAGCACCA---------------------GTC-----GGATGAGTCGCGA-------------------2711.00100000000000010000
.................................................................................................................................................................................................................................................................................................................................................................................................GGAGCACCA---------------------GTC-----GGATGAGTCGC.....................2311.00101000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................GGAGCACCA---------------------GTC-----GGATGAG.........................1911.00110000000000000000
...................................................................................................................................................................................................................................................................................................................................................................TT--ACCAGACGATTGTGGAT--------C......................................................................2011.00100100000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................GAGCACCA---------------------GTC-----GGATGAG.........................1811.00110000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................ATTGTGGAT--------CGGAGCACC..............................................................1811.00100100000000000000
...........................................................................................................................................................................................................................................................................................................................................................................GACGATTGTGGAT--------CGGAGCA................................................................2011.00110000000000000000
....................................................................................................................................................................................................................................................................................................................................................................T--ACCAGACGATTGTGGAT--------CGGA...................................................................2211.00100010000000000000
........................................................................................................................................GCTGTAAG-------ATCCGCGATCGCGG---TAG-AA.........................................................................................................................................................................................................................................................................................2711.00100000000001000000
..................................................................................................................................................................................................................................................................................................................................................................................................GAGCACCA---------------------GTC-----GGATGAGTC.......................2011.00110000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................GGAGCACCA---------------------GTC-----GGATGA..........................1811.00101000000000000000
.............................................................................................................................................AAG-------ATCCGCGATCGCGG---TA.............................................................................................................................................................................................................................................................................................1911.00100000010000000000
................................................................................................................................................................................................................................................................................................................................................................................................CGGAGCACCA---------------------GTC-----GGATGAGTC.......................2211.00100100000000000000
droSec2
TCTGGGCGTGG-------GCCTTGCCAGGTGGT----------------------GTGTACATAAGTGCGTGATTCAGTGGAGCAGCTGG-GCAGTTACCATTGGGC-------ACTC---------TCTCAGCACGCTGTAAG-------ATCCGCGATCGCGG---TAGCAAATTG-----------------------------------------------------------------------------------------------CCA---T---ACCACAATTGATGCAATAA------CAACTCTCGTTTCATTTCGTTTCG-TTTAAGGTGGCGCGCTTGAAGATT--ACCAGACGATTGTGGAT--------CGGAGCACCA---------------------GTC-----GGATGAGTCGCGA-------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................................................................................................................................................................................................................................................................................................................................................................................................CACCA---------------------GTC-----GGATGAGTCGCGA-------------------2112.0020200
...........................................................................................................................................................................................................................................................................................................................................................CTTGAAGATT--ACCAGACGATTGT...................................................................................2311.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................GCACCA---------------------GTC-----GGATGAGTCGCGA-------------------2211.0010010
.......................................................................................TGG-GCAGTTACCATTGGGC-------AC...................................................................................................................................................................................................................................................................................................................................................2111.0010001
................................................................................................................................................................................................................................................................................................................................................................................TTGTGGAT--------CGGAGCACCA---------------------GTC-----................................2111.0010001
..................................................................................................................ACTC---------TCTCAGCACGCTGC..........................................................................................................................................................................................................................................................................................................................1811.0010010
..................................................................TGCGTGATTCAGTGGAGCA..................................................................................................................................................................................................................................................................................................................................................................................1911.0010001
.................................................................GTGCGTGATTCAGTGGAGCAGCTGG-G...........................................................................................................................................................................................................................................................................................................................................................................2611.0010100
..............................................................................................................................................................................................................................................................................................................................................................................GATTGTGGAT--------CGGAGCACCA---------------------GTC-----GG..............................2511.0010100
.........................................................................................................................................................................................................................................................................................................................................................................CAGACGATTGTGGAT--------CGGAGC.................................................................2111.0010010
...........................................................................................................................................................................................................................................................................................................................................................CTTGAAGATT--ACCAGACGATT.....................................................................................2111.0011000
...................CCTTGCCAGGTGGT----------------------GTGTAC..........................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001
.......................................................................................................................................CGCTGTAAG-------ATCCGCGATCGCGG---TA.............................................................................................................................................................................................................................................................................................2511.0010100
..................................................................................................................................................................................................................................................................................................................................TTTCGTTTCG-TTTAAGGTGGC...............................................................................................................2111.0010001
........................................................................................................................................................................................................................................................................................................................................................................CCAGACGATTGTGGAT--------CGGAG..................................................................2111.0010100
..................................................................................................................................................................................................................................................................................................................................................................ATT--ACCAGACGATTGTGGAT--------CGG....................................................................2311.0010100
...............................GT----------------------GTGTACATAAGTGCGTGAT.............................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
............................................................................................................................................................................................................................................................................................................................................................TTGAAGATT--ACCAGACGATTGTGGAT--------.......................................................................2611.0010100
.................................................................................................................................................................................................................................................................................................................................................................................TGTGGAT--------CGGAGCACCA---------------------GT......................................1911.0011000
.........................................................................................................................................................................................................................................................................................................................................TCG-TTTAAGGTGGCGCGCTT.........................................................................................................2011.0011000
............................................................................................................................................................................................................................................................................................................................GTTTCATTTCGTTTCG-TTTAAG....................................................................................................................2211.0011000
...................................................................................................................................................................................................................................................................................................................................................................TT--ACCAGACGATTGTGGAT--------CGG....................................................................2211.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................GCACCA---------------------GTC-----GGATGAGTCGC.....................2011.0010100
.............................................................................................................................................................................................................................................................................................................................................................................CGATTGTGGAT--------CGGAGCACCA---------------------GTC-----GG..............................2611.0010100
droYak3
TCTGGGCGTGG-------GCCTTGCCAGGTG------------------------GTGTACATAAGTGCGTGATTCAGTGGAGCAGCTGG-GCAGTTACCATTGAGC-------ACTC---------TCTCAACACGCTGTAAG-------ATCCGCTATAGCGT---TAA-T-ATTA-----------------------------------------------------------------------------------------------CCT---T---ACCACAACAGATGCAATAA------CATCTCTTGTTTG-----ATTTCA-TTTAAGGTGGCGTGCTTGAAGATT--ACCATATGATTGTGGAT--------CGGAGCACCA---------------------GTC-----GGATGAGTCGCGA-------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................GATTGTGGAT--------CGGAGCACCA---------------------GT......................................2212.00200000020000
..............................................................................................................................................................................................................................................................................................................................................................GAAGATT--ACCATATGATTGT...................................................................................2012.00200000020000
....................................................................................................................................................................................................................................................................................................................................................................................GGAT--------CGGAGCACCA---------------------GTC-----GGATGA..........................2312.00202000000000
.....................................................................................................................................................................................................................................................................................................................................................GGCGTGCTTGAAGATT--ACC.............................................................................................1911.00101000000000
...............................................................................................................................................................................................................................................................................................................................................TAAGGTGGCGTGCTTGAAGATT--ACC.............................................................................................2511.00100000010000
......................................................................................................................................................................................................................................................................................................................................................GCGTGCTTGAAGATT--ACCATATGATT.....................................................................................2611.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................GGCGTGCTTGAAGATT--ACCATATGATTGT...................................................................................2911.00100000010000
.........................................................................................................GC-------ACTC---------TCTCAACACGCTGTAAG-------ATCC............................................................................................................................................................................................................................................................................................................2711.00100100000000
..........................................................................................................................................................................................................................................................................................................................................................................ATATGATTGTGGAT--------CGGAGCACCA---------------------........................................2411.00100000010000
..............................................................................................................................................................................................................................................................................................................................................................................GATTGTGGAT--------CGGAGCACCA---------------------GTC-----G...............................2411.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................GAGCACCA---------------------GTC-----GGATGAGT........................1911.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................................TGATTGTGGAT--------CGGAGCACCA---------------------GT......................................2311.00100000010000
................................................................................................................................................................................................................................................................................................................................................................................................CGGAGCACCA---------------------GTC-----GGATGAGTCGC.....................2411.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................TATGATTGTGGAT--------CGGAGCA................................................................2011.00100000100000
..........................................................................................................................................................................................................................................................................................................................................................................ATATGATTGTGGAT--------CGGAG..................................................................1911.00100000010000
.................................................................................................................................................................................................................................................................................................................................................................................................GGAGCACCA---------------------GTC-----GGATGAGTCGC.....................2311.00110000000000
......................................................................................................................................................................................................................................................................................................................................................................................AT--------CGGAGCACCA---------------------GTC-----GGATG...........................2011.00100100000000
......................................................................................................................................................................................................................................................................................................................................................................................................ACCA---------------------GTC-----GGATGAGTCGCGA-------------------2011.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................AGCACCA---------------------GTC-----GGATGAGTCGCGA-------------------2311.00110000000000
.................................................................................................................................................................................................................................................................................................................................................................................................GGAGCACCA---------------------GTC-----GGATGA..........................1811.00101000000000
..............................................................................................................................................................................................................................................................................................................................................................................GATTGTGGAT--------CGGAGCACCA---------------------GTC-----................................2311.00100000010000
............................................................................................................................................................................................................................................................................................................................................................TTGAAGATT--ACCATATGATTGT...................................................................................2211.00100000010000
.................................................................................................................................................................................................................................................................................................................................................................................................GGAGCACCA---------------------GTC-----GGATGAGTCG......................2211.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................CACCA---------------------GTC-----GGATGAGTCGC.....................1911.00110000000000
.....................................................................................................................................................................................................................................................................................................................................................GGCGTGCTTGAAGATT--ACCATATG........................................................................................2411.00101000000000
..................................................................................................................................................................................................................................................................................................................................................................ATT--ACCATATGATTGTGGAT--------CGGAG..................................................................2511.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................GTGGAT--------CGGAGCACCA---------------------GTC-----GGATGAG.........................2611.00100000010000
..............................................................................................................................................................................................................................................................................................................................................................................GATTGTGGAT--------CGGAGCACCA---------------------........................................2011.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................ATTGTGGAT--------CGGAGCACCA---------------------GTC-----GGATGA..........................2811.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................TGAAGATT--ACCATATGATTGT...................................................................................2111.00100000010000
..............................................................................................................................................................................................................................................................................................................................................................GAAGATT--ACCATATGATT.....................................................................................1811.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................GGAT--------CGGAGCACCA---------------------GTC-----GGAT............................2111.00110000000000
droEre2
TCTGGGCGTGG-------GCCTTGCCAGGTG------------------------GTGTACATAAGTGCGTGATTCAGTGGAGCAGCTGG-GCAGTTACCATTGGGC-------ATTG---------TCTCAACACGCTGTAAG-------ATCCGCGATCGCGT---TGA-TAATTG-----------------------------------------------------------------------------------------------CTA---T---ATCACAATTGAGGCAATAA------CGTCTCTCGTTTC-----ATTTCA-TTTAAGGTGGCGCGCTTGAAGATT--ACCAGACGATTTTGGAT--------CGGAGCACCA---------------------GAC-----GGATGAGTCGCGA-------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................TTGGAT--------CGGAGCACCA---------------------GAC-----GGATGAGTCG......................2916.0060000006
................................................................................................................................CTCAACACGCTGTAAG-------ATCCG...........................................................................................................................................................................................................................................................................................................2111.0011000000
....................................................................................................ATTGGGC-------ATTG---------TCTCAACACGCT............................................................................................................................................................................................................................................................................................................................2311.0010000010
................................................................................................................................................................................................................................................................................................................................................................................................CGGAGCACCA---------------------GAC-----GGATGAGTC.......................2211.0010000100
............................................................................................................................................................................................................................................................................................................................................................TTGAAGATT--ACCAGACGATTTTGGAT--------.......................................................................2611.0010000010
.................................................................................................................................................................................................................................................................................................................................................................................TTTGGAT--------CGGAGCACCA---------------------GAC-----GGATGA..........................2611.0010000100
..............................................................................................................................................................................................................................................................................................................................................................GAAGATT--ACCAGACGATTTTGGAT--------.......................................................................2411.0010000010
..................................................................................................................................................................................................................................................................................................................................................................ATT--ACCAGACGATTTTGGAT--------CGGA...................................................................2411.0010000100
..................................................................................................................................................................................................................................................................................................................................................................................................GAGCACCA---------------------GAC-----GGATGAG.........................1811.0010000100
........................................................................................................................................GCTGTAAG-------ATCCGCGATCGCGT---TGA-T..........................................................................................................................................................................................................................................................................................2611.0010000100
.............................................................................................................................................................................................................................................................................................................................................................TGAAGATT--ACCAGACGATTTTGGAT--------.......................................................................2511.0010000100
..................................................................................................................................................................................................................................................................................................................................................................................................GAGCACCA---------------------GAC-----GGATGAGT........................1911.0010000010
.....................................................................................................................................................................................................................................................................................................................GTCTCTCGTTTC-----ATTTCA-TTTAAG....................................................................................................................2411.0011000000
.....................................................................................GCTGG-GCAGTTACCATTGGGC-------.....................................................................................................................................................................................................................................................................................................................................................2111.0010000010

Generated: 05/16/2015 at 08:35 PM