ID:

dvi_6572

 Coordinate:

scaffold_12875:12863397-12863547 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-49.4 -49.2 -49.2

Flybase annnotation

CDS [Dvir\GJ20368-cds]; exon [dvir_GLEANR_5811:1]; intron [Dvir\GJ20368-in]

Repeatable elements

NameClassFamilyStrand
(CA)nSimple_repeatSimple_repeat+
mature

  1. dvi_6572  scaffold_12875:12863439-12863461 -
  2. scaffold_13049:7788964-7788986 -
star

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

CCGTTGAAGAAGGTTAAGGCTGCAGCCAAAACCAACGGTCACAGTCACATGTAAATCATTTGCATTTTTATTCACATTTTATTTAACATTCAATATACATGCATACATACATACACATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATAAGTATGTATATCCAGCTCTATGTGCTTGTTTGTTGTATCATTTGTTTTTGTTCTCTTTTTCCATTTTCGCCACATATACACACAACACATACACGTGT

***********************************.....((((.((((((.........(((((.(((((.(((((...............((((((((((((((((((((((((....))))))))))))))))))))))))))))).))))).)))))..........)))))).))))..................................*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060677

Argx9_ovaries_total

 M047

female body

 SRR060672

9x160_females_carcasses_total

 SRR060675

140x9_ovaries_total

 SRR060686

Argx9_0-2h_embryos_total

 V053

head

 GSM1528803

follicle cells		 V116

male body		 V047

embryo

 SRR060659

Argentina_testes_total

 SRR060682

9x140_0-2h_embryos_total

 M028

head
.......................AGCCAAAACCAACGGTCACAGTCAC........................................................................................................................................................................................................... 25 0 1 2.00 2 0 1 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................TGTTGTATCATTTGTTTTTGTTCTCT.......................................... 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
...............................CCAACGGTCACAGTCACATCG....................................................................................................................................................................................................... 21 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................CGGCTCTATGTGCTTGTTTGTT................................................................ 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................GTTTTTGTTCTCTTTTTCCATTTTCT............................. 26 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................GTGTGTGTGTGTGTATAAGTATG............................................................................................ 23 0 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0
..GTTGAAGAAGTCTAAGGCTC..................................................................................................................................................................................................................................... 20 3 5 0.20 1 0 0 0 0 0 0 0 1 0 0 0 0
...............................CCGACGATCACGGTCACATG........................................................................................................................................................................................................ 20 3 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................CCATTTGCATTTTTATCCTCATT............................................................................................................................................................................. 23 3 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0 0
....................................................................................................................................................................................CTTTGTTGTATGATTTGTTTT.................................................. 21 2 6 0.17 1 0 0 0 0 0 0 1 0 0 0 0 0
................................................................................................................................................................ATATCCAGGTCAACGTGCTT....................................................................... 20 3 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0
.....GAAGAAGGTAAAGGCTTC.................................................................................................................................................................................................................................... 18 2 15 0.13 2 0 0 0 0 0 0 0 0 0 1 1 0
....................................................................................................................................................................................CTTTGTTGTATGATTTGTT.................................................... 19 2 20 0.10 2 0 0 0 0 0 0 1 0 0 1 0 0
....CCAAGTAGGTTAAGGCTGC.................................................................................................................................................................................................................................... 19 3 14 0.07 1 0 0 0 0 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................TTTGTTGTATGATTTGT..................................................... 17 1 17 0.06 1 0 0 0 0 0 0 1 0 0 0 0 0
.AGTTGAAGAAGTCTAAGGCT...................................................................................................................................................................................................................................... 20 3 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1
.......................................................................................................................................TGTGTGTATGTGTATATAAGTATG............................................................................................ 24 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

GGCAACTTCTTCCAATTCCGACGTCGGTTTTGGTTGCCAGTGTCAGTGTACATTTAGTAAACGTAAAAATAAGTGTAAAATAAATTGTAAGTTATATGTACGTATGTATGTATGTGTAAACACACACACACACACACACACACACACACATATTCATACATATAGGTCGAGATACACGAACAAACAACATAGTAAACAAAAACAAGAGAAAAAGGTAAAAGCGGTGTATATGTGTGTTGTGTATGTGCACA

***********************************.....((((.((((((.........(((((.(((((.(((((...............((((((((((((((((((((((((....))))))))))))))))))))))))))))).))))).)))))..........)))))).))))..................................*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060676

9xArg_ovaries_total

 V116

male body		 SRR060658

140_ovaries_total

 SRR060679

140x9_testes_total

 SRR060660

Argentina_ovaries_total

 SRR060667

160_females_carcasses_total

 V053

head

 V047

embryo

 M047

female body

 SRR060675

140x9_ovaries_total

 SRR060659

Argentina_testes_total

 GSM1528803

follicle cells		 SRR060686

Argx9_0-2h_embryos_total
............................TTTGGTTGCCAGTGTCAGTGT.......................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
........................CGGTTTTGGTTGCCAGTGTCA.............................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............AATTCCGACGTCGGTTTTGGTTGCCAGT.................................................................................................................................................................................................................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................GGTGTATATGTGTGTTGTGTA........ 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................TCGGTTTTGGTTGCCAGTGTC............................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................AGCGGTGTTTATGCGTGTTGTA.......... 22 3 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................AGAAAAAGGTGAGAGCGGTGT........................ 21 2 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................CGTTGGATTTGGTTCCCAGT.................................................................................................................................................................................................................. 20 3 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.......................................GTGTGAGTTTACATTTAGTA................................................................................................................................................................................................ 20 2 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................AAGGTAAAAATAAGTGTAAGGT.......................................................................................................................................................................... 22 3 6 0.17 1 0 0 0 0 0 0 0 1 0 0 0 0 0
...............................................................................................................................................................ATAAAGGTCGAGAGACAAGAA....................................................................... 21 3 14 0.07 1 0 0 0 0 0 0 0 0 0 1 0 0 0
.................................................................................................................................................................................................................AAAAGGTTAAAGCGGTGA........................ 18 2 17 0.06 1 0 0 0 0 0 0 0 0 0 0 1 0 0
...................................................................................................................................ACACACACACACACACACATAT.................................................................................................. 22 0 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0
..............................................................................................................................CACACACACACACACACACACACA..................................................................................................... 24 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0
.........................................................................................................................................................................................................................................GTGGTGTGTATGGGCACT 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1
.........................................GTGAGTTTACATTTAGTA................................................................................................................................................................................................ 18 2 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12875:12863347-12863597 - dvi_6572 CCGT----------TG------AAGAAGGTTAAGGCT---GCAGCCAAAACCAACGGTCACAGTCA----CATGTAAATCATTTGCATTTTTA----TTCACATTT-----------------T--AT-------------------------T---------------------------------------------------------------------------------------------------------------------------------TAACATTCAATATA------------CAT-----------------------------------GCA------------------TACATACATACACATTTGTGTGTGTGT----GTGTGTGTG-TG----TGT-GTGTGTATAAGTATGTATAT---------------CCAGCT-----------CTATG--TGCT----------TG-----T---------TTGTTGTA-TC--------ATTTGTTTTTGTTCT----------------------------CTTT-TTCCATTTT---------CGCCACATATACACACAACACATACACGTGT
droMoj3 scaffold_6496:20125268-20125488 - CCGT----------CA------AAGAAGGTTAAGGCT---GCAGTCAGAAGCAACGGTCATAGTCA----CATGTAAATCATATGCATTTTTA----TTCACATTT-------------------AAT-----------------------------------------------------------------------------------------------------------------------------------------------------------TAA-----------------------CATA-CA---------------------GTAAACTCATGTA------------------TGTATGAATATGCGTTTG-------------------------TGTG--T-----ATGTGT--------------------------AAGTGTTTGGCTG----------TCCATATGTG---TCCA---TATCATTGT--TTGTTGTA-TC---------------------ATTC---------------GTATTGGAT-------TTTTATTTT---------CACCACA-----------CATACATACGTAC
droGri2 scaffold_15245:7506300-7506516 + CAGT----------TGAAGAAGACGAAGGTGAAGGCT---GCAGCGAAAAGCAACGGTCACAGTCA----CATGTAAATCATTTGCATTTTTA----TTCACATAT-----------------TCTACATA----------------------------TTTACAA--------------------------------------------------------------------------------------------------------------------AA-----------TG--TATGTGCATATATG-TAAATGT----------------------TCATATG------------------TGTATGT-------------------------------------------------TGTATGT----CTATCTA----TC------T----------------GTCTA--TGTT------TTATCATCTGTATGGTTGTTTCTTTCGTA-T-A-------------------------------------------------TATTT-GCC---------------------------------CAGACCCACAAAT
droWil2 scf2_1100000004954:2500897-2501147 - G-------------------------CGTGTGTGTGTG-------------------------------------------------------------------------------------------------------------------------------------------------TGTGTGTGTGTTTGCAAGCATGCAAACATTCAAAGATACATTTGTATCTTGATGCGTGTATATGTACCTTATGTGCGTATTTCATTCTTGAATTCCAATTG-GAA-------TA------------CAT-----------------------------GTGCGTGTG------------------TGTGTG----------------------------TGTGT-GTG----CGT-GTGTGTGTGT--------------------------GCGTGTCTGGCTATTGCGTTG--TGTC----------TC-----G---------CTGTTGTG-CG--------TTCCATTTGCACAC----------------------TGCAC-------TCGCATTTTGGAAAATACACATA-------------CATACATATGTAT
dp5 XL_group1e:12464000-12464228 + G---------------------AAAAAGAAAGAGGCA---GC---------AAATGGTTA-ATTTAATTACA---AATTCTT-TGCTTTCTTT----TCCA--TTG-----------------------TAT---------------------TAAATTTTCATGGGCTCTGACATCAGTGTA-----------------------------------------------------------------------------------------A--------------------------------------------------------------CGGTACAGCCATGCACACACATGCGTAAGTGTGTG--------------------------------CGTGT-G----TGCG-TGTGCTTGTGTGA----ATGTCTG----TGCG----------------------------TGCA----------TG-----T---------GT---------GTAGCACCTGCTGTCATTGCCAT----------------------------CTTTGCTACATTTT---------GGACGCTTAAATAC-------------CCAA
droPer2 scaffold_14:1933521-1933749 + G---------------------AAAAAGAAAGAGGCA---GC---------AAATGGTTA-ATTTAATTACA---AATTCTT-TGCTTTCTTT----TCCA--TTG-----------------------TAT---------------------TAAATTTTCATGGGCTCTGACATCAGTGTA-----------------------------------------------------------------------------------------A--------------------------------------------------------------CGGTACATCCATGCACACACATGCGTAAGTGTGTG--------------------------------CGTGT-G----TGCG-TGTGCTTGTGTGA----ATGTATG----TGCG----------------------------TGCA----------TG-----T---------GT---------GTGGCACCTGCTGTCATTGCCAT----------------------------CTTTGCTACATTTT---------GGACGCTTAAATAC-------------CCAA
droAna3 scaffold_13266:8804244-8804441 + G---------------------TCAAAGGTTAAGGCTATTGCAGCCAAAACCAATGGTC------A----CATGTAATTCAT-TGCATTTTCTT-CA------TTTTTTTGGTTTTTTTTTTTTTAACGTAA----AAA-CT----GAATTTG-------------------------------------------------------------------------------------------------------------------TACCCAAAACCCATAA-----------TA------------CAT-------------------------------------------------------------TAGTATCTGT------G----TTTCCGTG----TTATGAGTGTGT-----GTGTGA--------------------GC---TGTGTG---------------------------------TG---TTTTGTTGT------T--G-CC---------------------ATTTACCGCCAT------------------------------------------------------------------------
droBip1 scf7180000395994:32724-32919 - G---------------------TCAAAGGTTAAGGCTATTGCAGCCAAAACCAATGGTC------A----CATGTAATTCAT-TGCATTTTCTT-CA----CTTTT----------------TTTAAAGTAA----A-A-CCAAA--AATTCG-------------------------------------------------------------------------------------------------------------------TACCCAAAACCCATAA-----------TA------------CAT-------------------------------------------------------------AAGTATCTGT----GTG----TTACCGTG-------TGAGTG--T-----GTGTGA--------------------GC---TGTGTG--------------------------------------TTTTGTTGT------T--G-CC---------------------ATTTACCGCCATTCTAATTGTTTTGCTG--------------------------------------------------------
droKik1 scf7180000302411:413024-413196 + ----------------------------------------GCAGCCAAAACCAATGGTC------A----CATGTAATTCAT-TGCATTTTCTT-CA------TTT-----------------TTAGTGTAA----A---TC----------A-------------------------------------------------------------------------------------------------------------------AATCGAAACC--A------------------------------T-----------------------------ATTCATTTG------------------TGCATGA-----TG---------------------------TGAGTG---------------------------TATG----TGTTCGAGTGTTTGC---------AGTGTTTT---------TTTT---TATTGTTGTTGCTGTTGTCGTC---------------------ATTTACCGCCATTCTAATTGTTT-------------------------------------------------------------
droFic1 scf7180000453948:2134857-2135067 - -------------------------AAGGTTAAGGCTATAGCAGCCAAAACCAATGGTC------A----CATGTAATTCAC-TGCATTTTCCCTCA------TTT-----------------TTAACGTAA----AAA-AA--TCGAATTGA-------------------------------------------------------------------------------------------------------------------AATCGAAATCCCATTT-----------TATGTGT---------------------TTGTATGTAT--------GTAAATTTG------------------TGCATGACTTTCCG--------------------TCTGT-GTG-GTG---------------------------TGTG----TGTTTGAGTG---------------------------------AT---------TGT-TTTGTTGTG-TC---------------------ATTTACCGCCATTCTAATTGTTTTGGT---------------------------------------------------------
droEle1 scf7180000491214:991444-991649 - -------------------------AAGGTTAAGGCTACAGCAGCCAAAACCAATGGTC------A----CATGTAATTCAT-TGCATTTTTCC-CA------TAT-----------------TTAACGTAACAAAAAA-CCAAACCAATCGA-------------------------------------------------------------------------------------------------------------------AATCGAAATCCCATTT-AAA-------AA------------CAT-----------------------------ATACATTTG------------------TGCATGAGTATCTG--------------------TG--TG-T---------------------------------------------GAGTG---------------------------------C--------GTTGTTTTTGTTGTC-TC---------------------ATTTACCGCCATTCTAAATGTTTTGGTGTTGTTT-GTCCA--------------------------------------------
droRho1 scf7180000776786:21482-21686 + -------------------------AAGGTTAAGGCTACAGCAGCCAAAACCAATGGTC------A----CATGTAATTCAT-TGCATTTTTCC-CA------TTT-----------------TTAACATAA----AAAACC----CGATCGA-------------------------------------------------------------------------------------------------------------------AATCGAAATCCCATTT-ACA-------TA------------CAT-----------------------------ATACATTTG------------------TGCATGGGTATCTC--------------------TG--TG-T---------------------------------------------GAGTG---------------------------------C--------GTTGTTTTTGTTGTC-TC---------------------ATTTACCGCCATTCTAATTGTTTTCGTGTTGTTT-GCCCA-----------------------GTAC---------------TC
droBia1 scf7180000301754:5560893-5561086 + -------------------------AAGGTTAAGGCTGTAGCAGCCAAAACCAATGGTC------A----CACGTAATTCAT-TGCATTTTCCT-CA------TTT-----------------TGAACGTAG----AAA-CC------------------------------------------------------------------------------------------------------------------------------CATCGAAATCCCATTA-AAA-------TG------------CGC-----------------------------ATACATTCG----------TG-G----TGCATGCCT---TGTGTG-------------------------TGTG--T-----GTGTGC--------------------------GAGTGTTC-----------TG---------------TGCC---CCTTGTTGTTTTTGTTGTC-TC---------------------GTT---CGCCCCTCTAATTGTTT-------------------------------------------------------------
droTak1 scf7180000415345:381524-381736 + -------------------------AAGGTTAAGGCTATAGCAGCCAAAACCAATGGTC------A----CATGTAATTCAT-TGCATTTTCCCCCA------TTT-----------------TTAACGTAA----AAAACC------------------------------------------------------------------------------------------------------------------------------AATCGAATTCCCATTA-----------TA---------------------------------TATGTGCATACATTCATTTG------------------TGCATGAGTATATA--------------------TG--TA-T---------------GTATGT----CTGTCGGTGTG----TATTTGAGTG---------------------------------CC---CTTTGTTGTTTTTGTTGTC-TC---------------------ATTTACCGCCATTCTAATTGTTTTGGC---------------------------------------------------------
droEug1 scf7180000409672:1802155-1802363 - -------------------------AAGGTTAAGGCTATAGCAGCCAAAACCAATGGTC------A----CATGTAATTCAT-TGCATTTTCCC-CA------TTT-----------------TTAACGTAACAAAAAA-CCAAG--AAACCC-------------------------------------------------------------------------------------------------------------------ATTCGAAATCCCAT---------------------------------------------ATGTAT--------GTTTATTTG------------------TGCACGAATATCTGTGGG-------------------------AGTG--T-----GTGTGA------------ATGTG----TTTTCGAGTG---------------------------------CT---ATTTGCAATTTTTGTTGTG-CC---------------------ATTTACCGCCATTCTAATTGTTT-------------------------------------------------------------
dm3 chr2R:13309414-13309640 + -------------------------AAGGTTAAGGCTATAGCAGCCAAAACCAATGGTC------A----CATGTAATTCAT-TGCATTTTCCC-CA------TTT----------------CTTAACGTAA----AAA-CC------------------------------------------------------------------------------------------------------------------------------AATCGAAGTCCCATTT-----------TA------------CATACCAGACGTTCATATATGTATGTTTGTACATTCATTTG------------------TAGAGAGGCATATT--------------------TGTGTG-T-------------GTGT--------------GTTTG----TATTTGAGTG---------------------------------CT---TTTTGTTGTTTCTGTTGTG-T-GTGTT----------------ATTTACCGCCATTCTAATTGTTT-------------------------------------------------------------
droSim2 2r:13961749-13961961 + dsi_19451 -------------------------AAGGTTAAGGCTATAGCAGCCAAAACCAATGGTC------A----CATGTAATTCAT-TGCATTTTCCC-CA------TTT----------------CTTAACGTAA----AAA-CC------------------------------------------------------------------------------------------------------------------------------AATCGAAGTCCCATTA-----------TA------------CATA-CAGACGTTCATATATGTATGTTTGTACATTCATTTG------------------TGCATGGGCATCTG--------------------TGTGT-GTG-------------C---------------GGTTTG----TATTTGAGTG---------------------------------CT---TTTTGTTGTTTCTGTTGTG-TT---------------------ATTTACCTCCATTCT---------------------------------------------------------------------
droSec2 scaffold_1:10810488-10810698 + -------------------------AAGGTTAAGGCTATAGCAGCCAAAACCAATGGTC------A----CATGTAATTCAT-TGCATTTTCCC-CA------TTT----------------CTTAACGTAA----AAA-CC------------------------------------------------------------------------------------------------------------------------------AATCGAAGTCCCATTA-----------TA------------CATA-CAGACGTTCATATATGTATGTTTGTACATTCATTTG------------------TGCATAGGCATCTG--------------------TG--TG-TG-------------C---------------GGTTTG----TATTTGAGTG---------------------------------CT---TTTAGTTGTTTCTGTTGTG-TT---------------------ATTTACCTCCATTCT---------------------------------------------------------------------
droYak3 2R:18158854-18159057 - CAGC----------AG------TCAAAGGTTAAGGCTATAGCAGCCAAAACCAATGGTC------A----CATGTAATTCAT-TGCATTTTCCC-CA------TTT----------------TTTAACGTAC----AAA-CC------------------------------------------------------------------------------------------------------------------------------AATCGAAGTCCCATTT-----------TA------------CATA-CAAACGTACACATATGTAT--------ATTCATTTG------------------TGCATGGGCATCTG--------------------TG--TG-T-------------GTGTGA------------GTGTG----C---TGAGTG---------------------------------CT---TTTTGTTGTTTCTGTTG---TC---------------------ATTTACCGC---------------------------------------------------------------------------
droEre2 scaffold_4512:1190480-1190701 - TAGGGCTCTAGTCACA------TAAAAACATAAGATTATAGG-----------ATTATAT-ATATAATTATGTATA-------------------------------------------------AATATAC---------------------AAAATATTTATATGCATATGTATATG----TATA-------------------------------------------------------------------------------------------------------------------------------TGTATATTTATAT--------------GTATATGTATATGTATATGTATA----TGTATATGTATATG--------------------TA--------------TATGTATGTGTAT----ATGTATA----TGTA----------------------------TATG----------TATATGTAT--------ATGT---A----------------------------------TATGTATATGTA-------------------TAT---------GTATA-------------TGTATATGTATAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
CCGT----------TG------AAGAAGGTTAAGGCT---GCAGCCAAAACCAACGGTCACAGTCA----CATGTAAATCATTTGCATTTTTA----TTCACATTT-----------------T--AT-------------------------T---------------------------------------------------------------------------------------------------------------------------------TAACATTCAATATA------------CAT-----------------------------------GCA------------------TACATACATACACATTTGTGTGTGTGT----GTGTGTGTG-TG----TGT-GTGTGTATAAGTATGTATAT---------------CCAGCT-----------CTATG--TGCT----------TG-----T---------TTGTTGTA-TC--------ATTTGTTTTTGTTCT----------------------------CTTT-TTCCATTTT---------CGCCACATATACACACAACACATACACGTGTSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells
..........................................AGCCAAAACCAACGGTCACAGTCA----C..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002001000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGTA-TC--------ATTTGTTTTTGTTCT----------------------------CT....................................................2612.002000000000000000000000000000200000000000000000000000000000000000
..................................................CCAACGGTCACAGTCA----CATCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000010000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTTGTTCT----------------------------CTTT-TTCCATTTT---------CT.............................2611.001000000000000000000000010000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................GTG-TG----TGT-GTGTGTATAAGTATG...............................................................................................................................................................................................2320.501000000000000000000000000000000000000000000000000000000000000100
droMoj3
CCGT----------CA------AAGAAGGTTAAGGCT---GCAGTCAGAAGCAACGGTCATAGTCA----CATGTAAATCATATGCATTTTTA----TTCACATTT-------------------AAT-----------------------------------------------------------------------------------------------------------------------------------------------------------TAA-----------------------CATA-CA---------------------GTAAACTCATGTA------------------TGTATGAATATGCGTTTG-------------------------TGTG--T-----ATGTGT--------------------------AAGTGTTTGGCTG----------TCCATATGTG---TCCA---TATCATTGT--TTGTTGTA-TC---------------------ATTC---------------GTATTGGAT-------TTTTATTTT---------CACCACA-----------CATACATACGTACSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
No Reads
droGri2
CAGT----------TGAAGAAGACGAAGGTGAAGGCT---GCAGCGAAAAGCAACGGTCACAGTCA----CATGTAAATCATTTGCATTTTTA----TTCACATAT-----------------TCTACATA----------------------------TTTACAA--------------------------------------------------------------------------------------------------------------------AA-----------TG--TATGTGCATATATG-TAAATGT----------------------TCATATG------------------TGTATGT-------------------------------------------------TGTATGT----CTATCTA----TC------T----------------GTCTA--TGTT------TTATCATCTGTATGGTTGTTTCTTTCGTA-T-A-------------------------------------------------TATTT-GCC---------------------------------CAGACCCACAAATSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
No Reads
droWil2
G-------------------------CGTGTGTGTGTG-------------------------------------------------------------------------------------------------------------------------------------------------TGTGTGTGTGTTTGCAAGCATGCAAACATTCAAAGATACATTTGTATCTTGATGCGTGTATATGTACCTTATGTGCGTATTTCATTCTTGAATTCCAATTG-GAA-------TA------------CAT-----------------------------GTGCGTGTG------------------TGTGTG----------------------------TGTGT-GTG----CGT-GTGTGTGTGT--------------------------GCGTGTCTGGCTATTGCGTTG--TGTC----------TC-----G---------CTGTTGTG-CG--------TTCCATTTGCACAC----------------------TGCAC-------TCGCATTTTGGAAAATACACATA-------------CATACATATGTATSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
.............................................................................................................................................................................................................................CATTTGTATCTTGATGCGTGT...............................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
........................................................................................................................................................................................................................................TGATGCGTGTATATGTACCTTATGT................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
....................................................................................................................................................................................................................................ATCTTGATGCGTGTATATGTACCTTAT..................................................................................................................................................................................................................................................................................................................................................................................2711.00100100
.......................................................................................................................................................................................................................................................................................AATTG-GAA-------TA------------CAT-----------------------------GTGCGTGT....................................................................................................................................................................................................................................................................................2111.00100010
.............................................................................................................................................................................................................................CATTTGTATCTTGATGCGT.................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
............................................................................................................................................................................................................................ACATTTGTATCTTGATGCGTGT...............................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
...............................................................................................................................................................................................................................................................................................A-------TA------------CAT-----------------------------GTGCGTGTG------------------TGTGT............................................................................................................................................................................................................................................................2020.50100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................T-GTGTGTGTGT--------------------------GCGTGTC...................................................................................................................................................................18200.05100001
dp5
G---------------------AAAAAGAAAGAGGCA---GC---------AAATGGTTA-ATTTAATTACA---AATTCTT-TGCTTTCTTT----TCCA--TTG-----------------------TAT---------------------TAAATTTTCATGGGCTCTGACATCAGTGTA-----------------------------------------------------------------------------------------A--------------------------------------------------------------CGGTACAGCCATGCACACACATGCGTAAGTGTGTG--------------------------------CGTGT-G----TGCG-TGTGCTTGTGTGA----ATGTCTG----TGCG----------------------------TGCA----------TG-----T---------GT---------GTAGCACCTGCTGTCATTGCCAT----------------------------CTTTGCTACATTTT---------GGACGCTTAAATAC-------------CCAASizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
..................................................................................................................................................................................................................................................................................................................................................................................................................CGTGT-G----TGCG-TGTGCTTG.......................................................................................................................................................................................................1830.3310100000000
...........................................................................................................................................................................................................................................................................................................................................................................GTGTGTG--------------------------------CGTGT-G----TGCG-TG.............................................................................................................................................................................................................19200.0510100000000
droPer2
G---------------------AAAAAGAAAGAGGCA---GC---------AAATGGTTA-ATTTAATTACA---AATTCTT-TGCTTTCTTT----TCCA--TTG-----------------------TAT---------------------TAAATTTTCATGGGCTCTGACATCAGTGTA-----------------------------------------------------------------------------------------A--------------------------------------------------------------CGGTACATCCATGCACACACATGCGTAAGTGTGTG--------------------------------CGTGT-G----TGCG-TGTGCTTGTGTGA----ATGTATG----TGCG----------------------------TGCA----------TG-----T---------GT---------GTGGCACCTGCTGTCATTGCCAT----------------------------CTTTGCTACATTTT---------GGACGCTTAAATAC-------------CCAASizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
No Reads
droAna3
G---------------------TCAAAGGTTAAGGCTATTGCAGCCAAAACCAATGGTC------A----CATGTAATTCAT-TGCATTTTCTT-CA------TTTTTTTGGTTTTTTTTTTTTTAACGTAA----AAA-CT----GAATTTG-------------------------------------------------------------------------------------------------------------------TACCCAAAACCCATAA-----------TA------------CAT-------------------------------------------------------------TAGTATCTGT------G----TTTCCGTG----TTATGAGTGTGT-----GTGTGA--------------------GC---TGTGTG---------------------------------TG---TTTTGTTGT------T--G-CC---------------------ATTTACCGCCAT------------------------------------------------------------------------SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
No Reads
droBip1
G---------------------TCAAAGGTTAAGGCTATTGCAGCCAAAACCAATGGTC------A----CATGTAATTCAT-TGCATTTTCTT-CA----CTTTT----------------TTTAAAGTAA----A-A-CCAAA--AATTCG-------------------------------------------------------------------------------------------------------------------TACCCAAAACCCATAA-----------TA------------CAT-------------------------------------------------------------AAGTATCTGT----GTG----TTACCGTG-------TGAGTG--T-----GTGTGA--------------------GC---TGTGTG--------------------------------------TTTTGTTGT------T--G-CC---------------------ATTTACCGCCATTCTAATTGTTTTGCTG--------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
----------------------------------------GCAGCCAAAACCAATGGTC------A----CATGTAATTCAT-TGCATTTTCTT-CA------TTT-----------------TTAGTGTAA----A---TC----------A-------------------------------------------------------------------------------------------------------------------AATCGAAACC--A------------------------------T-----------------------------ATTCATTTG------------------TGCATGA-----TG---------------------------TGAGTG---------------------------TATG----TGTTCGAGTGTTTGC---------AGTGTTTT---------TTTT---TATTGTTGTTGCTGTTGTCGTC---------------------ATTTACCGCCATTCTAATTGTTT-------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
-------------------------AAGGTTAAGGCTATAGCAGCCAAAACCAATGGTC------A----CATGTAATTCAC-TGCATTTTCCCTCA------TTT-----------------TTAACGTAA----AAA-AA--TCGAATTGA-------------------------------------------------------------------------------------------------------------------AATCGAAATCCCATTT-----------TATGTGT---------------------TTGTATGTAT--------GTAAATTTG------------------TGCATGACTTTCCG--------------------TCTGT-GTG-GTG---------------------------TGTG----TGTTTGAGTG---------------------------------AT---------TGT-TTTGTTGTG-TC---------------------ATTTACCGCCATTCTAATTGTTTTGGT---------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
-------------------------AAGGTTAAGGCTACAGCAGCCAAAACCAATGGTC------A----CATGTAATTCAT-TGCATTTTTCC-CA------TAT-----------------TTAACGTAACAAAAAA-CCAAACCAATCGA-------------------------------------------------------------------------------------------------------------------AATCGAAATCCCATTT-AAA-------AA------------CAT-----------------------------ATACATTTG------------------TGCATGAGTATCTG--------------------TG--TG-T---------------------------------------------GAGTG---------------------------------C--------GTTGTTTTTGTTGTC-TC---------------------ATTTACCGCCATTCTAAATGTTTTGGTGTTGTTT-GTCCA--------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
-------------------------AAGGTTAAGGCTACAGCAGCCAAAACCAATGGTC------A----CATGTAATTCAT-TGCATTTTTCC-CA------TTT-----------------TTAACATAA----AAAACC----CGATCGA-------------------------------------------------------------------------------------------------------------------AATCGAAATCCCATTT-ACA-------TA------------CAT-----------------------------ATACATTTG------------------TGCATGGGTATCTC--------------------TG--TG-T---------------------------------------------GAGTG---------------------------------C--------GTTGTTTTTGTTGTC-TC---------------------ATTTACCGCCATTCTAATTGTTTTCGTGTTGTTT-GCCCA-----------------------GTAC---------------TCSizeHit CountTotal NormTotal
No Reads
droBia1
-------------------------AAGGTTAAGGCTGTAGCAGCCAAAACCAATGGTC------A----CACGTAATTCAT-TGCATTTTCCT-CA------TTT-----------------TGAACGTAG----AAA-CC------------------------------------------------------------------------------------------------------------------------------CATCGAAATCCCATTA-AAA-------TG------------CGC-----------------------------ATACATTCG----------TG-G----TGCATGCCT---TGTGTG-------------------------TGTG--T-----GTGTGC--------------------------GAGTGTTC-----------TG---------------TGCC---CCTTGTTGTTTTTGTTGTC-TC---------------------GTT---CGCCCCTCTAATTGTTT-------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
-------------------------AAGGTTAAGGCTATAGCAGCCAAAACCAATGGTC------A----CATGTAATTCAT-TGCATTTTCCCCCA------TTT-----------------TTAACGTAA----AAAACC------------------------------------------------------------------------------------------------------------------------------AATCGAATTCCCATTA-----------TA---------------------------------TATGTGCATACATTCATTTG------------------TGCATGAGTATATA--------------------TG--TA-T---------------GTATGT----CTGTCGGTGTG----TATTTGAGTG---------------------------------CC---CTTTGTTGTTTTTGTTGTC-TC---------------------ATTTACCGCCATTCTAATTGTTTTGGC---------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
-------------------------AAGGTTAAGGCTATAGCAGCCAAAACCAATGGTC------A----CATGTAATTCAT-TGCATTTTCCC-CA------TTT-----------------TTAACGTAACAAAAAA-CCAAG--AAACCC-------------------------------------------------------------------------------------------------------------------ATTCGAAATCCCAT---------------------------------------------ATGTAT--------GTTTATTTG------------------TGCACGAATATCTGTGGG-------------------------AGTG--T-----GTGTGA------------ATGTG----TTTTCGAGTG---------------------------------CT---ATTTGCAATTTTTGTTGTG-CC---------------------ATTTACCGCCATTCTAATTGTTT-------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
-------------------------AAGGTTAAGGCTATAGCAGCCAAAACCAATGGTC------A----CATGTAATTCAT-TGCATTTTCCC-CA------TTT----------------CTTAACGTAA----AAA-CC------------------------------------------------------------------------------------------------------------------------------AATCGAAGTCCCATTT-----------TA------------CATACCAGACGTTCATATATGTATGTTTGTACATTCATTTG------------------TAGAGAGGCATATT--------------------TGTGTG-T-------------GTGT--------------GTTTG----TATTTGAGTG---------------------------------CT---TTTTGTTGTTTCTGTTGTG-T-GTGTT----------------ATTTACCGCCATTCTAATTGTTT-------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM231091

Ovary		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
..............................TAAGGCTATAGCAGCCAAAACCAATGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2718.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010106000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................AAGGTTAAGGCTATAGCAGCCAAAACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2716.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006
....................................TATAGCAGCCAAAACCAATGGTC------A----C..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................TATAGCAGCCAAAACCAATGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
....................................TATAGCAGCCAAAACCAATGGTC------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................G------------------TAGAGAGGCATATT--------------------TGTGTG-........................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................CCCATTT-----------TA------------CATACCAGACGTTCATA...........................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---------------------------------CT---TTTTGTTGTTTCTGTT...............................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................AGAGAGGCATATT--------------------TGTGTG-T-------------G.........................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGAGTG---------------------------------CT---TTTTGTTGTTTCTGTTG..............................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
...................................CTATAGCAGCCAAAACCAATGGTC------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GTGT--------------GTTTG----TATTTGAGTG---------------------------------....................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000001000
............................................................................................CC-CA------TTT----------------CTTAACGTAA----AAA-.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTGTTTCTGTTGTG-T-GTG......................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.....................................................................................................................................................................................................................................................................................................................................................................................AGGCATATT--------------------TGTGTG-T-------------GTG.......................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................TCAT-TGCATTTTCCC-CA------TTT----------------C......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTG----TATTTGAGTG---------------------------------CT---TTTTGT.........................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTTCTGTTGTG-T-GTGTT----------------AT..................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.........................................................................................................................................................................................................................................................................................TTT-----------TA------------CATACCAGACGTTCATATATC.......................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGTTGTG-T-GTGTT----------------ATTTA...............................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................TGTTTGTACATTCATTTG------------------TAGAGAGGCA.......................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.........................AAGGTTAAGGCTATAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................TTCATTTG------------------TAGAGAGGCATAT....................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTTCTGTTGTG-T-GTGTT----------------A...................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................TAGCAGCCAAAACCAATGGTC------A----CATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................TTTGTACATTCATTTG------------------TAGAGAGGC........................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................T--------------------TGTGTG-T-------------GTGT--------------GTTTG----TATTTGAG.......................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...............................................................................................................................................................................................................................................................................................................................GTTCATATATGTATGTTTGTA.............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................CAT-TGCATTTTCCC-CA------TTT----------------CTTAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................TAGCAGCCAAAACCAATGGTC------A----CATCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................TG-T-------------GTGT--------------GTTTG----TATTTGAGT......................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GT--------------GTTTG----TATTTGAGTG---------------------------------CT---TTTTGTT........................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTGTTGTG-T-GTGTT----------------ATTT................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..........................................AGCCAAAACCAATGGTC------A----C..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................ACCAGACGTTCATATATGTATG...................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................G----TATTTGAGTG---------------------------------CT---TTTTGTTG.......................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................G----TATTTGAGTG---------------------------------CT---TTTTGTT........................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................TTT-----------TA------------CATACCAGACGTTCAT............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
..............................TAAGGCTATAGCAGCCAAAACCAATGGTC------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................CTATAGCAGCCAAAACCAATGGTC------A----...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
......................................TAGCAGCCAAAACCAATGGTC------A----CA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................CATACCAGACGTTCATATATG.......................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
..................................................................................................................................................................................................................................................................................AGTCCCATTT-----------TA------------CATACCAG....................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................GTAA----AAA-CC------------------------------------------------------------------------------------------------------------------------------AATCGAAGTCCC.........................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAGTG---------------------------------CT---TTTTGTTGTTT....................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTTGTTTCTGTTGTG-T-GTG......................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAGTG---------------------------------CT---TTTTGTTGTTTC...................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTG----TATTTGAGTG---------------------------------CT---TT.............................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..............................TAAGGCTATAGCAGCCAAAACCAATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TAAGGCTATAGCAGCCAAAACCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................GTG-T-------------GTGT--------------GTTTG----TATTT..........................................................................................................................................................................1830.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTG-T-------------GTGT--------------GTTTG----TATTT..........................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................TT--------------------TGTGTG-T-------------GTGT--------------GTTTG----...............................................................................................................................................................................18180.1730000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000100010000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTG-T-------------GTGT--------------GTTTG----TA.............................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000100000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGAGTG---------------------------------CT---TTTTGTAT.......................................................................................................................19150.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTG-T-------------GTGT--------------GTTTG----TATTG..........................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
droSim2
-------------------------AAGGTTAAGGCTATAGCAGCCAAAACCAATGGTC------A----CATGTAATTCAT-TGCATTTTCCC-CA------TTT----------------CTTAACGTAA----AAA-CC------------------------------------------------------------------------------------------------------------------------------AATCGAAGTCCCATTA-----------TA------------CATA-CAGACGTTCATATATGTATGTTTGTACATTCATTTG------------------TGCATGGGCATCTG--------------------TGTGT-GTG-------------C---------------GGTTTG----TATTTGAGTG---------------------------------CT---TTTTGTTGTTTCTGTTGTG-TT---------------------ATTTACCTCCATTCT---------------------------------------------------------------------SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
............................................................................................................................................................................................................................................................................................................................................................TG------------------TGCATGGGCATCTG--------------------TGTGT-GT.......................................................................................................................................................................................................................2314.00400000000004000000
............................................................................................................................................................................................................................................................................................................................................................TG------------------TGCATGGGCATCTG--------------------TGTGT-G........................................................................................................................................................................................................................2213.00300000000003000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCTGTTGTG-TT---------------------ATT.................................................................................1712.00200000000002000000
............................................................................................................................................................................................................................................................................................................................................................TG------------------TGCATGGGCATCTG--------------------TGTGT-GTG-------------C---------------.........................................................................................................................................................................................2512.00200000000001100000
................................................................................................................................................................................................................................................................................................................................................TGTACATTCATTTG------------------TGCATGGGCATC.....................................................................................................................................................................................................................................................2612.00200000000002000000
....................................................................................................................................................................................................................................................................................TCCCATTA-----------TA------------CATA-CAGACGTTCATA...........................................................................................................................................................................................................................................................................................................2611.00100000010000000000
.......................................AGCAGCCAAAACCAATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.00100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TGT-GTG-------------C---------------GGTTTG----TATTTGAGTG---------------------------------CT---C..............................................................................................................................2611.00100000000001000000
............................................................................................................................................................................................................................................................................................................................................................TG------------------TGCATGGGCATCTG--------------------TGTG...........................................................................................................................................................................................................................2011.00100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TGT-GTG-------------C---------------GGTTTG----TATTTGAGTG---------------------------------C...................................................................................................................................2411.00100000000001000000
............................................................................................................................................................................................................................................................................................................................................................TG------------------TGCATGGGCATCTG--------------------TGTGT-GTG-------------.........................................................................................................................................................................................................2411.00100000000001000000
.......................................AGCAGCCAAAACCAATGGTC------A----CATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010000000000000
.........................................................................................................................................................................................................................................................................................TTA-----------TA------------CATA-CAGACGTTCATAA..........................................................................................................................................................................................................................................................................................................2211.00100000001000000000
..........................................................................................................................................................................................................................................................................................................................................................TTTG------------------TGCATGGGCATCTG--------------------TGTGT-.........................................................................................................................................................................................................................2311.00100000000001000000
..........................................................................................................................................................................................................................................................................................................................................................TTTG------------------TGCATGGGCATCTG--------------------TGTG...........................................................................................................................................................................................................................2211.00100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................TTG------------------TGCATGGGCATC.....................................................................................................................................................................................................................................................1511.00100000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TG----TATTTGAGTG---------------------------------CT---TTTTGTTGTT.....................................................................................................................2411.00100000000001000000
..........................................................................................................................................A-CC------------------------------------------------------------------------------------------------------------------------------AATCGAAGTCCCATTA-----------TA------------C...........................................................................................................................................................................................................................................................................................................................2211.00100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGAGTG---------------------------------CT---TTTTGTTGTT.....................................................................................................................2011.00100000000001000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTTGTTTCTGTTG..............................................................................................................1711.00100000000001000000
........................................................................TGTAATTCAT-TGCATTTTCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................TTG------------------TGCATGGGCATCTG--------------------TGTGT-GTG-------------.........................................................................................................................................................................................................2511.00100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTGTTTCTGTTGTG-TT---------------------ATTTACC.............................................................................2611.00100000000001000000
..........................................................................................................................................................................................................................................................................................................................................................TTTG------------------TGCATGGGCATCTG--------------------TGTGT-G........................................................................................................................................................................................................................2411.00100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTG----TATTTGAGTG---------------------------------CT---TTTTGTTGTT.....................................................................................................................2511.00100000000001000000
.......................................................................................................TTT----------------CTTAACGTAA----AAA-CC------------------------------------------------------------------------------------------------------------------------------AATCGAAG.............................................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
.....................................................................................................................................................................................................................................................................................CCCATTA-----------TA------------CATA-CAGACGT................................................................................................................................................................................................................................................................................................................2011.00100000000001000000
...........................................................................................................................................................................................................................................................................................A-----------TA------------CATA-CAGACGTTCATAT..........................................................................................................................................................................................................................................................................................................2011.00100000000001000000
.........................................................................................................................................AA-CC------------------------------------------------------------------------------------------------------------------------------AATCGAAGTCCCATTA-----------TA------------CATA-.......................................................................................................................................................................................................................................................................................................................2611.00100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TG-------------C---------------GGTTTG----TATTTGAGTG---------------------------------CT---TTTTGT.........................................................................................................................2711.00100000000001000000
................................................................................................................................................................................................................................................................................................................................................................................TGCATGGGCATCTG--------------------TGTGT-GTG-------------C---------------G........................................................................................................................................................................................2411.00100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTG----TATTTGAGTG---------------------------------CT---TTTTGTTGTTTC...................................................................................................................2711.00100000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGTG---------------------------------CT---TTTTGTTGTTTCTGTTGTG-T..........................................................................................................2811.00100000000001000000
............................................................................................................................................................................................................................................................................................................................................................TG------------------TGCATGGGCATCTG--------------------TGTA...........................................................................................................................................................................................................................2011.00100000000001000000
............................................................................................................................TAACGTAA----AAA-CC------------------------------------------------------------------------------------------------------------------------------AATCGAAGTCCCA........................................................................................................................................................................................................................................................................................................................................................2611.00100000000001000000
......................................................................................................................................................................................................................................................................................................................................TATGTATGTTTGTACA...........................................................................................................................................................................................................................................................................................1690.11100000000001000000
droSec2
-------------------------AAGGTTAAGGCTATAGCAGCCAAAACCAATGGTC------A----CATGTAATTCAT-TGCATTTTCCC-CA------TTT----------------CTTAACGTAA----AAA-CC------------------------------------------------------------------------------------------------------------------------------AATCGAAGTCCCATTA-----------TA------------CATA-CAGACGTTCATATATGTATGTTTGTACATTCATTTG------------------TGCATAGGCATCTG--------------------TG--TG-TG-------------C---------------GGTTTG----TATTTGAGTG---------------------------------CT---TTTAGTTGTTTCTGTTGTG-TT---------------------ATTTACCTCCATTCT---------------------------------------------------------------------SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
........................................................................................................................................................................................................................................................................................ATTA-----------TA------------CATA-CAGACGTTCAT............................................................................................................................................................................................................................................................................................................2111.0010100
droYak3
CAGC----------AG------TCAAAGGTTAAGGCTATAGCAGCCAAAACCAATGGTC------A----CATGTAATTCAT-TGCATTTTCCC-CA------TTT----------------TTTAACGTAC----AAA-CC------------------------------------------------------------------------------------------------------------------------------AATCGAAGTCCCATTT-----------TA------------CATA-CAAACGTACACATATGTAT--------ATTCATTTG------------------TGCATGGGCATCTG--------------------TG--TG-T-------------GTGTGA------------GTGTG----C---TGAGTG---------------------------------CT---TTTTGTTGTTTCTGTTG---TC---------------------ATTTACCGC---------------------------------------------------------------------------SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTG----C---TGAGTG---------------------------------CT---TTTTGTT........................................................................................................................1911.00100000010000
...................................CTATAGCAGCCAAAACCAATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
...........................................................................................................................................................................................................................................................................................................................................AT--------ATTCATTTG------------------TGCATGGGC........................................................................................................................................................................................................................................................2011.00101000000000
droEre2
TAGGGCTCTAGTCACA------TAAAAACATAAGATTATAGG-----------ATTATAT-ATATAATTATGTATA-------------------------------------------------AATATAC---------------------AAAATATTTATATGCATATGTATATG----TATA-------------------------------------------------------------------------------------------------------------------------------TGTATATTTATAT--------------GTATATGTATATGTATATGTATA----TGTATATGTATATG--------------------TA--------------TATGTATGTGTAT----ATGTATA----TGTA----------------------------TATG----------TATATGTAT--------ATGT---A----------------------------------TATGTATATGTA-------------------TAT---------GTATA-------------TGTATATGTATATSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................TATG--------------------TA--------------TATGTATGTGTAT----ATGTATA----...................................................................................................................................................................................2620.5011000000

Generated: 06/28/2015 at 04:30 PM