ID:

dvi_6474

 Coordinate:

scaffold_12875:12452851-12452909 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [Dvir\GJ21925-cds]; exon [dvir_GLEANR_7247:3]; exon [dvir_GLEANR_7247:2]; CDS [Dvir\GJ21925-cds]; intron [Dvir\GJ21925-in]

No Repeatable elements found

Sense Strand Reads

##################################################-----------------------------------------------------------##################################################
TGGGAAGACCGCTCCAACTTTGTTACCTTGCTGAGGGAAATCAAGGAAGCGTATGTATCCGCCAAGTGATCCATTGGTCCGCATCGACTTTAATTTGGTTAATGTCTAGCTTCGCACCCTACGGCTACGAGCTGGGCATTGCTGTGGGCGCGGGCGAGT
**************************************************.......................((((....(((.((((.......)))).))).))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total V116
male body		 SRR060665
9_females_carcasses_total
 SRR060664
9_males_carcasses_total
 SRR060667
160_females_carcasses_total
 SRR060672
9x160_females_carcasses_total
 SRR060668
160x9_males_carcasses_total
 SRR060666
160_males_carcasses_total
 SRR060671
9x160_males_carcasses_total
 M047
female body
 SRR060669
160x9_females_carcasses_total
 SRR1106729
mixed whole adult body
 V047
embryo
 M027
male body		 SRR060660
Argentina_ovaries_total
 V053
head
 SRR060686
Argx9_0-2h_embryos_total
.........................................................................................................................................ATTGCTGTGGGCGCGGGC.... 18 0 1 15.00 15 4 1 4 2 1 0 2 0 0 1 0 0 0 0 0 0
..........................CTTGCTGAGGGAAATCAAGGA................................................................................................................ 21 0 1 10.00 10 5 1 2 0 0 0 0 2 0 0 0 0 0 0 0 0
..............CAACTTTGTTACCTTGCTGAG............................................................................................................................ 21 0 1 7.00 7 2 2 1 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................ATTGCTGTGGGCGCGGGCGA.. 20 0 1 6.00 6 2 2 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................CTTGCTGAGGGAAATCAAGGAAGC............................................................................................................. 24 0 1 5.00 5 2 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................CTTGCTGAGGGAAATCAAGGAA............................................................................................................... 22 0 1 5.00 5 0 3 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.....AGACCGCTCCAACTTTGTTAC..................................................................................................................................... 21 0 1 4.00 4 0 3 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....AAGACCGCTCCAACTTTGTTACC.................................................................................................................................... 23 0 1 4.00 4 0 0 1 0 0 2 0 0 0 1 0 0 0 0 0 0
............................................................................................................................CTACGAGCTGGGCATTGCTGTGGGC.......... 25 0 1 4.00 4 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................TACGAGCTGGGCATTGCTGTG............. 21 0 1 4.00 4 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................GTTACCTTGCTGAGGGAAATCAAGGA................................................................................................................ 26 0 1 3.00 3 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 0
...............AACTTTGTTACCTTGCTGAG............................................................................................................................ 20 0 1 3.00 3 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................TACGAGCTGGGCATTGCTGTGGGC.......... 24 0 1 3.00 3 0 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..............CAACTTTGTTACCTTGCTGAGGGAA........................................................................................................................ 25 0 1 3.00 3 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
................................GAGGGAAATCAAGGAAGC............................................................................................................. 18 0 1 3.00 3 0 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................GGCTACGAGCTGGGCATTG.................. 19 0 1 3.00 3 2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..........................CTTGCTGAGGGAAATCAA................................................................................................................... 18 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................TACGAGCTGGGCATTGCTGTGGGCGC........ 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......GACCGCTCCAACTTTGTTAC..................................................................................................................................... 20 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0
................................GAGGGAAATCAAGGAAGCCTT.......................................................................................................... 21 2 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................CTACGAGCTGGGCATTGCTGTGGGCG......... 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........GCTCCAACTTTGTTACCTTGCTGAGGGA......................................................................................................................... 28 0 1 2.00 2 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0
...........................TTGCTGAGGGAAATCAAGGAAGCCTT.......................................................................................................... 26 2 1 2.00 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.GGGAAGACCGCTCCAACTTT.......................................................................................................................................... 20 0 1 2.00 2 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................CTACGAGCTGGGCATTGCT................ 19 0 1 2.00 2 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................GAGCTGGGCATTGCTGTG............. 18 0 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.GGGAAGACCGCTCCAACTTTGTTACC.................................................................................................................................... 26 0 1 2.00 2 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................ATTGCTGTGGGCGCGGGCG... 19 0 1 2.00 2 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.....................GTTACCTTGCTGAGGGAAATCAAG.................................................................................................................. 24 0 1 2.00 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............CAACTTTGTTACCTTGCTGAGGGA......................................................................................................................... 24 0 1 2.00 2 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..............CAACTTTGTTACCTTGCTGA............................................................................................................................. 20 0 1 2.00 2 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........GCTCCAACTTTGTTACCTTGCTGA............................................................................................................................. 24 0 1 2.00 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
................................GAGGGAAATCAAGGAAGCCTTC......................................................................................................... 22 3 1 2.00 2 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0
.....AGACCGCTCCAACTTTGTT....................................................................................................................................... 19 0 1 2.00 2 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................TACGAGCTGGGCATTGCTGT.............. 20 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................CTACGAGCTGGGCATTGCTGTGG............ 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................GTTACCTTGCTGAGGGAAATC..................................................................................................................... 21 0 1 2.00 2 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0
...............................TGAGGGAAATCAAGGAAGCCTT.......................................................................................................... 22 2 1 2.00 2 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0
.....................GTTACCTTGCTGAGGGAAATCAA................................................................................................................... 23 0 1 2.00 2 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0
...................TTGTTACCTTGCTGAGGGAAATCAA................................................................................................................... 25 0 1 2.00 2 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................GTTACCTTGCTGAGGGAA........................................................................................................................ 18 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0
...GAAGACCGCTCCAACTTTGTTAC..................................................................................................................................... 23 0 1 2.00 2 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................ATTGCTGTGGGCGCGGGCGAGT 22 0 1 2.00 2 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..............CAACTTTGTTACCTTGCTGAGG........................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.........................................................................................................................................ATTGCCGTGGGCGCGGGC.... 18 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.......ACCGCTCCAACTTTGTTAC..................................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........CTCCAACTTTGTTACCTTGCTGAG............................................................................................................................ 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.....AGACCGCTCCAACTTTGTTA...................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................TTGCTGAGGGAAATCAAGGAAGC............................................................................................................. 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................TGAGGGAAATCAAGGAAGCCTTCG........................................................................................................ 24 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................TGCTGTGGGCGCGGGCGA.. 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................GCACCCTACGGCTACGAGCTGGG....................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......GACCGCTCCAACTTTGTTACCTTGCT............................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................GCTACGAGCTGGGCATTGCTGTGGGC.......... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..........................CTTGCTGAGGGAAATCAAGGCA............................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................ATTGTTGTGGGCGCGGGCGA.. 20 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..............CAACTTTGTTACCTTGCTGAGGG.......................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................TGGGCATTGCTGTGGGCGCG....... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............CCAACTTTGTTACCTTGCTGAGGG.......................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
............................TGCTGAGGGAAATCAAGGA................................................................................................................ 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..............CAACTTTGTTACCTTGCT............................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........GCTCCAACTTTGTTACCTTGCT............................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....AGACCGCTCCAACTTTGTTACCTTGCTGAGGG.......................................................................................................................... 32 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..................TTTGTTACCTTGCTGAGGGAAA....................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...............................TGAGGGAAATCAAGGAAGC............................................................................................................. 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................CTACGAGCTGGGCATTGCTGTG............. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....AAGACCGCTCCAACTTTGTTA...................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................TTGCTGAGGGAAATCAAGGAAGCC............................................................................................................ 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............CCAACTTTGTTACCTTGCTGAG............................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................AGGGAAATCAAGGAAGCCTT.......................................................................................................... 20 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................GTTACCTTGCTGAGGGAAAT...................................................................................................................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................GGGCATTGCTGTGGGCGCGGG..... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............CAACTTTGTTACCTTGCTGAGGGAAAT...................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................TACCTTGCTGAGGGAAATCAAGG................................................................................................................. 23 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................TACGGCTACGAGCTGGGCATTGCTGTG............. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................CTACGGCTACGAGCTGGGCATTGCTGT.............. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................TGTTACCTTGCTGAGGGAA........................................................................................................................ 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...GAAGACCGCTCCAACTTTGTTACCT................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................TTGCTGAGGGAAATCAAGG................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................TGAGGGAAATCAAGGAAGCCT........................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................GGCTACGAGCTGGGCATTGCTGTGGGCGCGGGC.... 33 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...............................TGAGGGAAATCAAGGAAT.............................................................................................................. 18 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................ACCTTGCTGAGGGAAATCAAGGA................................................................................................................ 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....AGACCGCTCCAACTTTGTTACC.................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......GACCGCTCCAACTTTGTTACC.................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................TACGAGCTGGGCATTGCT................ 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
TGGGCAGACCGCTCCAACTTT.......................................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................ATTGCTCTGGGCGCGGGC.... 18 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................GGCTACGAGCTGGGCATTGCTGT.............. 23 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...............AACTTTGTTACCTTGCTGAGGGA......................................................................................................................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................GCCTTCGCACCCTACGGCTACGAGCT.......................... 26 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................GCATTGCTGTGGGCGCGGG..... 19 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................GCTACGAGCTGGGCATTGCTGTG............. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................CTTGCTGAGGGAAATCAAGG................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............CCAACTTTGTTACCTTGCTGA............................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...GAAGACCGCTCCAACTTT.......................................................................................................................................... 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................GCTGGGCATTGCTGTGGGC.......... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.............................................................................................................................TACGAGCTGGGCATTGCTGTCGGC.......... 24 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................CTACGGCTACGAGCTGGGC...................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...............AACTTTGTTACCTTGCTGAGGGAAAT...................................................................................................................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................CTTGCTGAGGGAAATCAAG.................................................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................CTTGCTGAGGGAAATCAAGGAAG.............................................................................................................. 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................TTGCTGAGGGAAATCAAGGA................................................................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.....AGACCGCTCCAACTTTGTTACCTTGCT............................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
....AAGACCGCTCCAACTTTGTTAC..................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................GGCATTGCTGTGGGCGCGGGTGA.. 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................GGCATTGCTGTGGGCGCG....... 18 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................CGCACCCTACGGCTACGAGCTG......................... 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................CTACGAGCTGGGCATTGCTGT.............. 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................GCTGGGCATTGCTGTGGGCGC........ 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................ACGAGCTGGGCATTGCTGTGGGC.......... 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................CGGCTACGAGCTGGGCATTGCTGT.............. 24 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................CGCACCCTACGGCTACGAGCTGGGC...................... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.................CTTTGTTACCTTGCTGAGG........................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................TGAGGGAAATCAAGGAAGCCTTC......................................................................................................... 23 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................GGCTACGAGCTGGGCATTGCTGTG............. 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................ATTACTGTGGGCGCGGGC.... 18 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................GTTACCTTGCTGAGGGAAA....................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................CTTGCTGAGGCAAATCAAGGA................................................................................................................ 21 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................CTTGCTGAGGGAAATCAAGGAAGCCTT.......................................................................................................... 27 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................TGTCTAGCTTCGCACCCTAC..................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................CTACGAGCTGGGCATTGCTGTGGGCGC........ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................CTTTGTTACCTTGCTGAGGGA......................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................GCACCCTACGGCTACGAGCT.......................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................AGCTGGGCATTGCTGTGGGCGCGGGC.... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.......................TACCTTGCTGAGGGAAATCAAGGA................................................................................................................ 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............AACTTTGTTACCTTGCTG.............................................................................................................................. 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.GGGAAGACCGCTCCAACTTTGTTA...................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.......................TACCTTGCTGAGGGAAATCA.................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................CGAGCTGGGCATTGCTGTGGGC.......... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................GGGAAATCAAGGAAGCCTT.......................................................................................................... 19 2 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................CGCGTCGACGTTAAATTGGTT........................................................... 21 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
..........................................................................................................................GGCTACGAGCTGGGC...................... 15 0 3 0.33 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..................................................................................................................................GCTGCGCATTGCTGTGGGC.......... 19 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......GACCGCGCCAACTTTGAT....................................................................................................................................... 18 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
..................................................GTATGGATCCACCAAGAGA.......................................................................................... 19 3 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................ATTGCTGTGGGCGCGCTC.... 18 2 16 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................AGCCTTCGCACCCTACGG................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

ACCCTTCTGGCGAGGTTGAAACAATGGAACGACTCCCTTTAGTTCCTTCGCATACATAGGCGGTTCACTAGGTAACCAGGCGTAGCTGAAATTAAACCAATTACAGATCGAAGCGTGGGATGCCGATGCTCGACCCGTAACGACACCCGCGCCCGCTCA
**************************************************.......................((((....(((.((((.......)))).))).))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total V116
male body		 SRR060672
9x160_females_carcasses_total
 SRR060666
160_males_carcasses_total
 SRR060668
160x9_males_carcasses_total
 M027
male body		 M047
female body
 SRR060682
9x140_0-2h_embryos_total
 V047
embryo
 SRR060687
9_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060662
9x160_0-2h_embryos_total
 SRR060679
140x9_testes_total
 SRR060659
Argentina_testes_total
 SRR060667
160_females_carcasses_total
 SRR060669
160x9_females_carcasses_total
 SRR1106729
mixed whole adult body
.........................................................AGGCGGTTCACGTGGTAAC................................................................................... 19 2 3 4.67 14 3 9 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................AGGCGGTTCACTTGGCAAC................................................................................... 19 2 2 4.50 9 8 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................AAAGGCGGTTCACGTGGTAAC................................................................................... 21 3 3 4.00 12 8 3 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................AAAGGCGGTTCACTTGGCAAC................................................................................... 21 3 3 2.00 6 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................AGGCGGTTCACGAGGCAACCAAG............................................................................... 23 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................AAAGGCGGTTCACGTGGTAACC.................................................................................. 22 3 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................GCCGGGTCACTAGGTAACGA................................................................................. 20 3 3 0.67 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0
........................................................TAGGCGGTTCACCTGGCAAC................................................................................... 20 3 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................AGGCGGTTCACTTGGCAA.................................................................................... 18 2 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................AAGGCGGTTCACGTGGTAAC................................................................................... 20 3 13 0.46 6 1 3 0 0 0 0 0 0 0 0 1 1 0 0 0 0
........................................................TAGGCGGTTCACGTGGCAAC................................................................................... 20 3 7 0.43 3 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................AGGCGGTTCACGTGGAAAC................................................................................... 19 3 20 0.40 8 3 1 1 0 0 0 0 0 0 0 0 0 1 1 1 0
.......................................................ATAGGCGGTTCACGTGGCAAC................................................................................... 21 3 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................AAAGGCGGTTCACTTGGCAA.................................................................................... 20 3 8 0.25 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................GGCGGTTCACTTGGCAAC................................................................................... 18 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................AAAGGCGGTTCACGTGGTAA.................................................................................... 20 3 12 0.25 3 1 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0
..........................................................GGCGGTTCACGTGGTAAC................................................................................... 18 2 10 0.20 2 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................................ATCAAATCGTGGTATGCCG.................................. 19 3 10 0.10 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................AAGGCGGTTCACTTGGCAAC................................................................................... 20 3 10 0.10 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................AGGCGGTTCACTTGGCAGC................................................................................... 19 3 17 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................AAAGGCGGTTCACTTGGCA..................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
............................................................CGGTTCACTAGGTTACT.................................................................................. 17 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12875:12452801-12452959 + dvi_6474 TGGGAAGACCGCTCCAACTTTGTTACCTTGCTGAGGGAAATCAAGGAAGCGTATGTATCCGC--CA-AGTG---ATCCATTGGTCC-----------------------------------------GCATC-GACT-------------------TTAA-----------------------TTT----G------G---TTAAT------G----T----CTAGCTTCGCACCCTACGGCTACGAGCTGGGCATTGCTGTGGGCGCGGGCGAGT
droMoj3 scaffold_6496:14413626-14413785 - TGGGAGGATCGCGCCAATTTTGTGACTCTACTGCGCGAGCTGAGGGAGGCGTAGGTATTCAT--AA-GCT-------------------------------------------------------------CATACT----------------------------------TCAGCTCCGATC------TGATCTTTCC--ATTGT------GCCCTC----CCAGATTTGCACCTTATGGCTATGAGCTGAGCATTGCCGTAGGCGCCGGCGAGT
droGri2 scaffold_15245:7905728-7905937 - GCCGCAGATAAAGCCAACTTTGTGACGCTCTTGAGAGAAATTAAGCAAGCGTAAGTAATACT--CTG----ATAAATTATTGAGAAGCTTTTACTTAGATCGAGTTAAAGCAAGAGGAGAGAACGAAAT--------TCTTGTTTCAAGAACGTT----------------TAA------------------AA-------ATAAT------G-TGTT----TTAGATTTGATCCTCATGGCTTGGAGTTGGGCATTGCAGTGGGAGCTTCGGAAG
droWil2 scf2_1100000004954:4017334-4017493 - TGGGATGATCGTGCCAACTTTGTCACTTTGTTGCGTGAAATTAAGGAAGCGTAAGTAGTGGG--CT-AG-----------------------------------------------GATTCAACATTATGATTGTCT----------------------------------CTAATCCTT---TGT----C------G---TT------------TAT----TCAGTTTTGCTCCTTACGGTTATGAATTGGGCATTGCCGTGGGTGCCGGACAGG
dp5 3:17589408-17589573 - TGGGACGATCGCTCCAACTTTGTGACCCTACTGCGAGAAATCAAGGAAGCGTAAGTCCACAGTCC------CAA---------------------------------------------TCACCTAAGAATC--------------------ACCCTTTA-----------------------TC----TGAAAACAACC-GTTTT------C-TCCT----AAAGCTTTGCTCCCTACGGCTATGAGCTGGGAATCGCTGTCGGTGCGGGAGAAT
droPer2 scaffold_31:202045-202210 + TGGGACGATCGCTCCAACTTTGTGACCCTACTGCGAGAAATCAAGGAAGCGTAAGTCCACAGTCC------CAA---------------------------------------------TCACCTAAGAATC--------------------ACCCTTTA-----------------------TC----TGAAAACAACC-ATTTT------C-TCCT----ATAGCTTTGCGCCCTACGGCTATGAGCTGGGAATCGCTGTCGGTGCGGGAGAAT
droAna3 scaffold_13266:7010647-7010808 + TGGGATGATCGTGCCAACTTTGTGACCCTTCTGCGCGAACTGAAGGAAGCGTAAGATTCTAT--------------------------------------------------------------GAACT--------TTCGG-----------------GTTTGAA----------TTTT---TGT------AACTAAT---ATATGTTTGAA-TCCT----CCAGTTTCGCTCCCTACGGCTATGAGTTGGGTATTGCTGTTGGAGCCGGAGAGG
droBip1 scf7180000396423:548799-548953 + TGGGACGATCGTGCCAACTTTGTAACCCTTCTTCGCGAACTGAAGGAAGCGTAAGTTTTCAA-------------------------------------------------------------TGTCTT--------TGCGGTTTCTGGATCTCATTAAG-----------------------------------------TTTGA------A-TCCT----TCAGTTTCGCTCCCTACGGCTATGAGTTGGGTATTGCTGTTGGAGCTGGAGAGG
droKik1 scf7180000302476:2075016-2075173 - TGGGACGATCGCGCCAACTTTGTGACCCTGCTGCGTGAGCTGAAGGAAGCGTGAGTTTGGGAT--AC----A--------------------------------------------------TCAAAGATTA--------------------AGT-----------------C-----------C----TGAAAATAAT---TTGT------T-TCCTTAACTTAGTTTCGCTCCCTACGGCTATGAGCTGGGCATTGCTGTGGGAGCCGGCGAAT
droFic1 scf7180000454044:400199-400357 - TGGAACGATCGCGCCAACTTTGTGACCCTGCTGCGTGAACTGAAGGAAGCGTGAGTTGGGGAA--CT--------------------------------------------------------------------------------------CCTTGTGTTTGAACAACCCAT------------------AACTAATTAGTTAT------A-TCCT----TTAGCTTCGCTCCCTATGGTTACGAGTTGAGCATTGCTGTCGGTGCTGGCGAGT
droEle1 scf7180000491240:71386-71540 + TGGAACGATCGCTCCAACTTTGTGACCCTGCTGCGCGAGATTAAGGAAGCGTGAGTACTAGTT--CC----ACT-----CTTGGAGGC-----------------------------------------C------T----------------------------------CCG------------------AAATGATTGGGTTT------G-TTCC----ATAGCTTCGCTCCCTATGGCTATGAGTTGGGCATTGCTGTGGGTGCCGGTGAGT
droRho1 scf7180000780003:3797-3951 + TGGGATGACCGCGCCAACTTTGTGACCCTGCTGCGCGAGATTAAGGAAGCGTGAGTACTGATT--CC----ACA-----CTGGGAGGT-----------------------------------------------CT----------------------------------CCA------------------AATTAATCGGTTAT------T-TCCT----GCAGCTTTGCTCCCTACGGCTACGAGTTGGGAATTGCTGTGGGTGCCGGCGAGT
droBia1 scf7180000301754:550107-550264 + TGGAACGATCGCTCCAACTTTGTGACCCTGCTCCGCGAACTGAAGGAGGCGTGAGTACTGGAT--CC----CTA-----------------------------------------------A--CTTAAAGCCAATC----------------------------------TTA------------------AACTAAGGAGATTT------C-TTTT----GTAGCTTCGCTCCCTATGGCTACGAGCTGAGCATTGCTGTGGGTGCCGGTGAGG
droTak1 scf7180000415391:81476-81630 + GATGCGGATCGCGTTAACTTTGTGACCCTGCTGCGAGAGATTAAGGAAACGTGAGTAATTGT--AT-AG-----ATTCTTTGGAAGGC------------------------------------------------T----------------------------------ATAA-CCT------------------AT-ATCGAT------T-ACCT----AAAGCTATGACAAGTATGGATTGGAACTGGGTATTGCTGTGGGTGCCTCCGAGA
droEug1 scf7180000409474:995365-995518 + TGGAACGATCGTGCCAACTTTGTGACTCTGCTGCGTGAGCTTAAGGAAGCGTAAGTACAAGAT--CT----TTA----------------------------------------------------------------------------------------------------CCTTTA---AGTCCAGG-ATTTCA-T----GT------T-TTCTTCAAACAGTTTCGCTCCCTATGGCTATGAACTGAGCATCGCCGTTGGTGCCGGTGAGG
dm3 chr2R:16956091-16956252 - TGGAACGATCGTGCCAACTTTGTGACTCTGCTGCGCGAGATTAAGGAGGCGTGAGTAGTGGA--G---------------------------------------------------GAGCCACTACCGAAGCATACT----------------------------------TTAGTTTTA-------------AATGA---TTTAT------G-TCCT----ATAGGTTCGCTCCCTATGGCTATGAATTGGGTATTGCGGTGGGCGCCGGTGAAT
droSim2 2r:17513802-17513963 - dsi_20194 TGGAACGATCGTGCCAACTTTGTGACTCTGCTGCGTGAGATTAAGGAGGCGTGAGTAGAGGA--G---------------------------------------------------GAGCCACTCCCGAAACGTACT----------------------------------TTAGACTTA---TGT----G------A---TTTAT------G-TCCT----GTAGGTTCGCTCCCTATGGCTATGAGTTGGGTATTGCCGTGGGCGCCGGCGAGT
droSec2 scaffold_9:285875-286036 - TGGAACGATCGTGCCAACTTTGTGACTCTGCTGCGCGAGATTAAGGAAGCGTGAGTAGAGGA--G---------------------------------------------------GAGTCACTCCTAAAACGTACT----------------------------------TTAGATTTA---TGT----G------A---TTTAT------G-TCCT----GTAGGTTCGCTCCCTATGGCTATGAGTTGGGTATTGCCGTGGGCGCCGGTGAGT
droYak3 2R:12239334-12239490 + TGGAACGATCGTGCTAACTTTGTGACTCTGCTGCGCGAGATTAAGGAGGCGTGAGTACAGGAT--CT----A--------------------------------------------------CTCCTTAAGTCT-----------------------------GAG-----TTT------------------AGTTAATGGTTTAT------G-TCCT----GCAGGTTCGCTCCCTATGGCTATGAGTTGGGTATTGCTGTGGGCGCCGGCGAGT
droEre2 scaffold_4845:11099511-11099667 - TGGGACGATCGTGCTAACTTTGTCACTCTGCTGCGCGAGATTAAGGAGGCGTGAGTACAGGAT--CT----A--------------------------------------------------CGCCCGAAGCCTACT----------------------------------TTA------------------AGTTAATGGTTTGT------G-TCCT----GCAGGTTCGCTCCCTATGGCTATGAGCTGGGTATTGCGGTGGGCGCCGGCGAGT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TGGGAAGACCGCTCCAACTTTGTTACCTTGCTGAGGGAAATCAAGGAAGCGTATGTATCCGC--CA-AGTG---ATCCATTGGTCC-----------------------------------------GCATC-GACT-------------------TTAA-----------------------TTT----G------G---TTAAT------G----T----CTAGCTTCGCACCCTACGGCTACGAGCTGGGCATTGCTGTGGGCGCGGGCGAGTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............................................................................................................................................................................................................................................................ATTGCTGTGGGCGCGGGC....18115.0015000000000000004122010010000000000000000000000000000000000000040
..........................CTTGCTGAGGGAAATCAAGGA.....................................................................................................................................................................................................................................21110.0010000000000000002100000200000000000000000000000000000000000000050
..............CAACTTTGTTACCTTGCTGAG.................................................................................................................................................................................................................................................2117.007000000000000001201100000000000000000000000000000000000000000020
..............................................................................................................................................................................................................................................................ATTGCTGTGGGCGCGGGCGA..2016.006000000000000001200000100000000000000000000000000000000000000020
..........................CTTGCTGAGGGAAATCAAGGAAGC..................................................................................................................................................................................................................................2415.005000000000000001100000100000000000000000000000000000000000000020
..........................CTTGCTGAGGGAAATCAAGGAA....................................................................................................................................................................................................................................2215.005000000000000001300000100000000000000000000000000000000000000000
.....AGACCGCTCCAACTTTGTTAC..........................................................................................................................................................................................................................................................2114.004000000000000000301000000000000000000000000000000000000000000000
....AAGACCGCTCCAACTTTGTTACC.........................................................................................................................................................................................................................................................2314.004000000000000001000210000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................CTACGAGCTGGGCATTGCTGTGGGC..........2514.004000000000000000001000010000000000000000000000000000000000000020
..................................................................................................................................................................................................................................................TACGAGCTGGGCATTGCTGTG.............2114.004000000000000001100000000000000000000000000000000000000000000020
.....................GTTACCTTGCTGAGGGAAATCAAGGA.....................................................................................................................................................................................................................................2613.003000000000000000002010000000000000000000000000000000000000000000
...............AACTTTGTTACCTTGCTGAG.................................................................................................................................................................................................................................................2013.003000000000000001200000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................TACGAGCTGGGCATTGCTGTGGGC..........2413.003000000000000000200000010000000000000000000000000000000000000000
..............CAACTTTGTTACCTTGCTGAGGGAA.............................................................................................................................................................................................................................................2513.003001000000000000100000000000000000000000000000000000000000000010
................................GAGGGAAATCAAGGAAGC..................................................................................................................................................................................................................................1813.003000000000000000210000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................GGCTACGAGCTGGGCATTG..................1913.003000000000000000000000000000000000000000000000000000000000001020
..........................CTTGCTGAGGGAAATCAA........................................................................................................................................................................................................................................1812.002000000000000000100000000000000000000000000000000000000000000010
..................................................................................................................................................................................................................................................TACGAGCTGGGCATTGCTGTGGGCGC........2612.002000000000000000000000000000000000000000000000000000000000000020
......GACCGCTCCAACTTTGTTAC..........................................................................................................................................................................................................................................................2012.002000000000000000002000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................CTACGAGCTGGGCATTGCTGTGGGCG.........2612.002000000000000000000000000000000000000000000000000000000000000020
..........GCTCCAACTTTGTTACCTTGCTGAGGGA..............................................................................................................................................................................................................................................2812.002001000000000001000000000000000000000000000000000000000000000000
.GGGAAGACCGCTCCAACTTT...............................................................................................................................................................................................................................................................2012.002000000000000001000000100000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................CTACGAGCTGGGCATTGCT................1912.002000000000000000001100000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................GAGCTGGGCATTGCTGTG.............1812.002000000000000001100000000000000000000000000000000000000000000000
.GGGAAGACCGCTCCAACTTTGTTACC.........................................................................................................................................................................................................................................................2612.002000000000000000000010010000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................ATTGCTGTGGGCGCGGGCG...1912.002100000000000000000000000000000000000000000000000000000000000010
.....................GTTACCTTGCTGAGGGAAATCAAG.......................................................................................................................................................................................................................................2412.002000000000000001001000000000000000000000000000000000000000000000
..............CAACTTTGTTACCTTGCTGAGGGA..............................................................................................................................................................................................................................................2412.002000000000000000100010000000000000000000000000000000000000000000
..............CAACTTTGTTACCTTGCTGA..................................................................................................................................................................................................................................................2012.002000000000000000100100000000000000000000000000000000000000000000
..........GCTCCAACTTTGTTACCTTGCTGA..................................................................................................................................................................................................................................................2412.002000000000000000001000000000000000000000000000000000000000000010
.....AGACCGCTCCAACTTTGTT............................................................................................................................................................................................................................................................1912.002000000000000001010000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................TACGAGCTGGGCATTGCTGT..............2012.002000000000000000100000000000000000000000000000000000000000000010
.................................................................................................................................................................................................................................................CTACGAGCTGGGCATTGCTGTGG............2312.002000000000000000000000000000000000000000000000000000000000000020
.....................GTTACCTTGCTGAGGGAAATC..........................................................................................................................................................................................................................................2112.002001000000000001000000000000000000000000000000000000000000000000
.....................GTTACCTTGCTGAGGGAAATCAA........................................................................................................................................................................................................................................2312.002000000000000000010000010000000000000000000000000000000000000000
...................TTGTTACCTTGCTGAGGGAAATCAA........................................................................................................................................................................................................................................2512.002000000000000000001100000000000000000000000000000000000000000000
.....................GTTACCTTGCTGAGGGAA.............................................................................................................................................................................................................................................1812.002000000000000000002000000000000000000000000000000000000000000000
...GAAGACCGCTCCAACTTTGTTAC..........................................................................................................................................................................................................................................................2312.002000000000000001000010000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................ATTGCTGTGGGCGCGGGCGAGT2212.002001000000000000000000000000000000000000000000000000000000000010
..............CAACTTTGTTACCTTGCTGAGG................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.......ACCGCTCCAACTTTGTTAC..........................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
...........CTCCAACTTTGTTACCTTGCTGAG.................................................................................................................................................................................................................................................2411.001000000000000000000100000000000000000000000000000000000000000000
.....AGACCGCTCCAACTTTGTTA...........................................................................................................................................................................................................................................................2011.001000000000000001000000000000000000000000000000000000000000000000
...........................TTGCTGAGGGAAATCAAGGAAGC..................................................................................................................................................................................................................................2311.001000000000000000000000010000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................TGCTGTGGGCGCGGGCGA..1811.001000000000000000100000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................GCACCCTACGGCTACGAGCTGGG.......................2311.001000000000000000000000000000000000000000000000000000000000000010
......GACCGCTCCAACTTTGTTACCTTGCT....................................................................................................................................................................................................................................................2611.001000000000000000000000100000000000000000000000000000000000000000
................................................................................................................................................................................................................................................GCTACGAGCTGGGCATTGCTGTGGGC..........2611.001001000000000000000000000000000000000000000000000000000000000000
..............CAACTTTGTTACCTTGCTGAGGG...............................................................................................................................................................................................................................................2311.001000000000000000100000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................TGGGCATTGCTGTGGGCGCG.......2011.001000000000000000100000000000000000000000000000000000000000000000
.............CCAACTTTGTTACCTTGCTGAGGG...............................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
............................TGCTGAGGGAAATCAAGGA.....................................................................................................................................................................................................................................1911.001000000000000000000010000000000000000000000000000000000000000000
..............CAACTTTGTTACCTTGCT....................................................................................................................................................................................................................................................1811.001000000000000001000000000000000000000000000000000000000000000000
..........GCTCCAACTTTGTTACCTTGCT....................................................................................................................................................................................................................................................2211.001000000000000000100000000000000000000000000000000000000000000000
.....AGACCGCTCCAACTTTGTTACCTTGCTGAGGG...............................................................................................................................................................................................................................................3211.001000000000000000000000000000000000000000000000000000000000100000
..................TTTGTTACCTTGCTGAGGGAAA............................................................................................................................................................................................................................................2211.001000000000000000010000000000000000000000000000000000000000000000
...............................TGAGGGAAATCAAGGAAGC..................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................CTACGAGCTGGGCATTGCTGTG.............2211.001000000000000000000000000000000000000000000000000000000000000010
....AAGACCGCTCCAACTTTGTTA...........................................................................................................................................................................................................................................................2111.001000000000000000100000000000000000000000000000000000000000000000
...........................TTGCTGAGGGAAATCAAGGAAGCC.................................................................................................................................................................................................................................2411.001000000000000000100000000000000000000000000000000000000000000000
.............CCAACTTTGTTACCTTGCTGAG.................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
.....................GTTACCTTGCTGAGGGAAAT...........................................................................................................................................................................................................................................2011.001000000000000000000000010000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................GGGCATTGCTGTGGGCGCGGG.....2111.001000000000000000100000000000000000000000000000000000000000000000
..............CAACTTTGTTACCTTGCTGAGGGAAAT...........................................................................................................................................................................................................................................2711.001000000000000000000100000000000000000000000000000000000000000000
.......................TACCTTGCTGAGGGAAATCAAGG......................................................................................................................................................................................................................................2311.001000000000000000000000100000000000000000000000000000000000000000
............................................................................................................................................................................................................................................TACGGCTACGAGCTGGGCATTGCTGTG.............2711.001000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................................................................................................................................CTACGGCTACGAGCTGGGCATTGCTGT..............2711.001000000000000000000000000000000000000000000000000000000000000010
....................TGTTACCTTGCTGAGGGAA.............................................................................................................................................................................................................................................1911.001000000000000001000000000000000000000000000000000000000000000000
...GAAGACCGCTCCAACTTTGTTACCT........................................................................................................................................................................................................................................................2511.001000000000000000100000000000000000000000000000000000000000000000
...........................TTGCTGAGGGAAATCAAGG......................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................................................................................................................................................GGCTACGAGCTGGGCATTGCTGTGGGCGCGGGC....3311.001000000000000000000000000000000000000000000000000000000000100000
...............................TGAGGGAAATCAAGGAAT...................................................................................................................................................................................................................................1811.001000000000000000000000010000000000000000000000000000000000000000
........................ACCTTGCTGAGGGAAATCAAGGA.....................................................................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
.....AGACCGCTCCAACTTTGTTACC.........................................................................................................................................................................................................................................................2211.001000000000000000100000000000000000000000000000000000000000000000
......GACCGCTCCAACTTTGTTACC.........................................................................................................................................................................................................................................................2111.001000000000000000000010000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................TACGAGCTGGGCATTGCT................1811.001000000000010000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................GGCTACGAGCTGGGCATTGCTGT..............2311.001000000000000000000100000000000000000000000000000000000000000000
...............AACTTTGTTACCTTGCTGAGGGA..............................................................................................................................................................................................................................................2311.001000000000000001000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................GCATTGCTGTGGGCGCGGG.....1911.001000000000000000010000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................GCTACGAGCTGGGCATTGCTGTG.............2311.001000000000000000000000000000000000000000000000000000000000000010
..........................CTTGCTGAGGGAAATCAAGG......................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
.............CCAACTTTGTTACCTTGCTGA..................................................................................................................................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
...GAAGACCGCTCCAACTTT...............................................................................................................................................................................................................................................................1811.001000000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................GCTGGGCATTGCTGTGGGC..........1911.001000000000000000000000000000000000000000000000000000000000001000
...........................................................................................................................................................................................................................................CTACGGCTACGAGCTGGGC......................1911.001000000000000000000000000000000000000000000000000000000000100000
...............AACTTTGTTACCTTGCTGAGGGAAAT...........................................................................................................................................................................................................................................2611.001000000000000000000000010000000000000000000000000000000000000000
..........................CTTGCTGAGGGAAATCAAG.......................................................................................................................................................................................................................................1911.001000000000000000100000000000000000000000000000000000000000000000
..........................CTTGCTGAGGGAAATCAAGGAAG...................................................................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
...........................TTGCTGAGGGAAATCAAGGA.....................................................................................................................................................................................................................................2011.001000000000000000000010000000000000000000000000000000000000000000
.....AGACCGCTCCAACTTTGTTACCTTGCT....................................................................................................................................................................................................................................................2711.001000000000000000000000100000000000000000000000000000000000000000
....AAGACCGCTCCAACTTTGTTAC..........................................................................................................................................................................................................................................................2211.001000000000000000000000010000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................GGCATTGCTGTGGGCGCG.......1811.001000000000000000010000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................CGCACCCTACGGCTACGAGCTG.........................2211.001000000000000000000000010000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................CTACGAGCTGGGCATTGCTGT..............2111.001000000000000000000000010000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................GCTGGGCATTGCTGTGGGCGC........2111.001000000000000000010000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................ACGAGCTGGGCATTGCTGTGGGC..........2311.001000000000000000000000010000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................CGGCTACGAGCTGGGCATTGCTGT..............2411.001000000000000000010000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................CGCACCCTACGGCTACGAGCTGGGC......................2511.001001000000000000000000000000000000000000000000000000000000000000
.................CTTTGTTACCTTGCTGAGG................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................................................................................................................................................GGCTACGAGCTGGGCATTGCTGTG.............2411.001000000000000000000000010000000000000000000000000000000000000000
.....................GTTACCTTGCTGAGGGAAA............................................................................................................................................................................................................................................1911.001000000000000001000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................T------G----T----CTAGCTTCGCACCCTAC.....................................2011.001000000000000001000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................CTACGAGCTGGGCATTGCTGTGGGCGC........2711.001000000000000000000000000000000000000000000000000000000000000010
.................CTTTGTTACCTTGCTGAGGGA..............................................................................................................................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................GCACCCTACGGCTACGAGCT..........................2011.001000000000000001000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................AGCTGGGCATTGCTGTGGGCGCGGGC....2611.001000000000000000000000000000000000000000000000000000000000001000
.......................TACCTTGCTGAGGGAAATCAAGGA.....................................................................................................................................................................................................................................2411.001000000000000000100000000000000000000000000000000000000000000000
...............AACTTTGTTACCTTGCTG...................................................................................................................................................................................................................................................1811.001000000000000000001000000000000000000000000000000000000000000000
.GGGAAGACCGCTCCAACTTTGTTA...........................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.......................TACCTTGCTGAGGGAAATCA.........................................................................................................................................................................................................................................2011.001000000000000000010000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................CGAGCTGGGCATTGCTGTGGGC..........2211.001000000000000001000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................GGCTACGAGCTGGGC......................1530.331000000000000000000000000000000000000000000000000000000000100000
droMoj3
TGGGAGGATCGCGCCAATTTTGTGACTCTACTGCGCGAGCTGAGGGAGGCGTAGGTATTCAT--AA-GCT-------------------------------------------------------------CATACT----------------------------------TCAGCTCCGATC------TGATCTTTCC--ATTGT------GCCCTC----CCAGATTTGCACCTTATGGCTATGAGCTGAGCATTGCCGTAGGCGCCGGCGAGTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........................CTACTGCGCGAGCTGAGGG......................................................................................................................................................................................................................................1911.001100000
...............................TGCGCGAGCTGAGGGAGGCA.................................................................................................................................................................................................................................2011.001000100
................ATTTTGTGACTCTACTGCGCGAGCT...........................................................................................................................................................................................................................................2511.001100000
droGri2
GCCGCAGATAAAGCCAACTTTGTGACGCTCTTGAGAGAAATTAAGCAAGCGTAAGTAATACT--CTG----ATAAATTATTGAGAAGCTTTTACTTAGATCGAGTTAAAGCAAGAGGAGAGAACGAAAT--------TCTTGTTTCAAGAACGTT----------------TAA------------------AA-------ATAAT------G-TGTT----TTAGATTTGATCCTCATGGCTTGGAGTTGGGCATTGCAGTGGGAGCTTCGGAAGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.......................................................................................................................................................................................................................................................GTTGGGCATTGCAGTGGGA..........1911.00101
..................................................................................................................................................................................................................................................TTGGAGTTGGGCATTGCA................1811.00110
droWil2
TGGGATGATCGTGCCAACTTTGTCACTTTGTTGCGTGAAATTAAGGAAGCGTAAGTAGTGGG--CT-AG-----------------------------------------------GATTCAACATTATGATTGTCT----------------------------------CTAATCCTT---TGT----C------G---TT------------TAT----TCAGTTTTGCTCCTTACGGTTATGAATTGGGCATTGCCGTGGGTGCCGGACAGGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.GGGATGATCGTGCCAACTTTGTCA...........................................................................................................................................................................................................................................................2412.00200020
.........................................................................................................................................................................................................................................................TGGGCATTGCCGTGGGTG.........1812.00202000
.......................................................................................................................................................................................................................................................ATTGGGCATTGCCGTGGGTGCCGGACA..2711.00100010
.....................................................................................................................................................................................................................................................GAATTGGGCATTGCCGTGGGTG.........2211.00100010
.................................................................................................................................................................................................................................................TTATGAATTGGGCATTGCCGTGGGTGCC.......2811.00100010
.........................CTTTGTTGCGTGAAATTAA........................................................................................................................................................................................................................................1911.00100010
.....................................................................................................................................................................................................................................................GAATTGGGCATTGCCGTGGGTGCCG......2511.00100010
..................TTTGTCACTTTGTTGCGTGA..............................................................................................................................................................................................................................................2011.00100010
.......................................................................................................................................................................................................................................................ATTGGGCATTGCCGTGGG...........1811.00100010
.........................................................................................................................................................................................................................................................TGGGCATTGCCGTGGGTGG........1911.00101000
..........................................................................................................................................................................................................................................................GGGCATTGCCGTGGGTGGGT......20120.08100100
dp5
TGGGACGATCGCTCCAACTTTGTGACCCTACTGCGAGAAATCAAGGAAGCGTAAGTCCACAGTCC------CAA---------------------------------------------TCACCTAAGAATC--------------------ACCCTTTA-----------------------TC----TGAAAACAACC-GTTTT------C-TCCT----AAAGCTTTGCTCCCTACGGCTATGAGCTGGGAATCGCTGTCGGTGCGGGAGAATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..GGACGATCGCTCCAACTTTGTGACC.........................................................................................................................................................................................................................................................2511.0010010000000
droPer2
TGGGACGATCGCTCCAACTTTGTGACCCTACTGCGAGAAATCAAGGAAGCGTAAGTCCACAGTCC------CAA---------------------------------------------TCACCTAAGAATC--------------------ACCCTTTA-----------------------TC----TGAAAACAACC-ATTTT------C-TCCT----ATAGCTTTGCGCCCTACGGCTATGAGCTGGGAATCGCTGTCGGTGCGGGAGAATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....................................................................................................................................................................................................................................................GAGCTGGGAATCGCTGTCGGTGCGGGA....2714.004000004
............................................................................................................................................................................................................................................................GAATCGCTGTCGGTGCGGGA....2012.002000002
............TCCAACTTTGTGACCCTACTGCGAGA..............................................................................................................................................................................................................................................2612.002200000
.....................................................................................................................................................................................................................................................GAGCTGGGAATCGCTGTCGGTGCGG......2512.002200000
.......................................................................................................................................................................................................................................................GCTGGGAATCGCTGTCGGTGCGGGA....2512.002001001
..GGACGATCGCTCCAACTTTGTGACCCT.......................................................................................................................................................................................................................................................2711.001100000
.........CGCTCCAACTTTGTGACCCTACT....................................................................................................................................................................................................................................................2311.001010000
..GGACGATCGCTCCAACTTTGTGACC.........................................................................................................................................................................................................................................................2511.001000001
.........CGCTCCAACTTTGTGACCCTACTGCGAGA..............................................................................................................................................................................................................................................2911.001100000
..........GCTCCAACTTTGTGACCCTACTGCGAGA..............................................................................................................................................................................................................................................2811.001010000
...........................................................................................................................................................................................................................................................GGAATCGCTGTCGGTGCGGGA....2111.001010000
........................................................................................................................................................................................................................................................CTGGGAATCGCTGTCGGTGC........2011.001000001
.........CGCTCCAACTTTGTGACCCT.......................................................................................................................................................................................................................................................2011.001100000
...GACGATCGCTCCAACTTT...............................................................................................................................................................................................................................................................1811.001100000
..................................................................................................................................................................................................................................................TATGAGCTGGGAATCGCT................1811.001000001
.....................................................................................................................................................................................................................................................GAGCTGGGAATCGCTGTCG............1911.001010000
........................................................................................................................................................................................................................................................CTGGGAATCGCTGTCGGTGCGGG.....2311.001000001
...............AACTTTGTGACCCTACTGCGAGAA.............................................................................................................................................................................................................................................2411.001100000
................ACTTTGTGACCCTACTGCGAGA..............................................................................................................................................................................................................................................2211.001001000
.................................................................................................................................................................................................................................................CTATGAGCTGGGAATCGCTGTC.............2211.001001000
...............AACTTTGTGACCCTACTGCGAG...............................................................................................................................................................................................................................................2211.001001000
...................................................................................................................................................................................................................................TTTGCGCCCTACGGCTATGAGCTG.........................2411.001000001
..........................................................................................................................................................................................................................................................GGGAATCGCTGTCGGTGCGGGA....2211.001010000
droAna3
TGGGATGATCGTGCCAACTTTGTGACCCTTCTGCGCGAACTGAAGGAAGCGTAAGATTCTAT--------------------------------------------------------------GAACT--------TTCGG-----------------GTTTGAA----------TTTT---TGT------AACTAAT---ATATGTTTGAA-TCCT----CCAGTTTCGCTCCCTACGGCTATGAGTTGGGTATTGCTGTTGGAGCCGGAGAGGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................................................................................................................................................................................................................................................GTATTGCTGTTGGAGCCGGAGA..2212.002200000
..............CAACTTTGTGACCCTTCTG...................................................................................................................................................................................................................................................1911.001100000
................................................................................................................................................................................................................................................GCTATGAGTTGGGTATTGCT................2011.001100000
.......................GACCCTTCTGCGCGAACTGAAGGAA....................................................................................................................................................................................................................................2511.001010000
.................CTTTGTGACCCTTCTGCGCGAA.............................................................................................................................................................................................................................................2211.001100000
..............................................................................................................................................................................................................................................................ATTGCTGTTGGAGCCGGAGAGG2211.001100000
.............................................................................................................................................................................................................................................ACGGCTATGAGTTGGGTATTGCT................2311.001001000
...............AACTTTGTGACCCTTCTGCG.................................................................................................................................................................................................................................................2011.001010000
...............................................................................................................................................................................................................................................GGCTATGAGTTGGGTATT...................1811.001100000
...............................................................................................................................................................................................................................................GGCTATGAGTTGGGTATTGCTGTTG............2511.001100000
.....................................................................................................................................................................................................................................CGCTCCCTACGGCTATGAGTTG.........................2211.001000010
...........................................................................................................................................................................................................................................CTACGGCTATGAGTTGGGT......................1911.001000010
...............................................................................................................................................................................................................................................GGCTATGAGTTGGGTATTGCT................2111.001000010
..............................................................................................................................................................................................................................................................ATTGCTGTTGGAGCCGGA....1811.001100000
...............................................................................................................................................................................................................................................................TTGCTGTTGGAGCCGGAGA..1911.001100000
.........CGTGCCAACTTTGTGACCCT.......................................................................................................................................................................................................................................................2011.001010000
...................................................................................................................................................................................................................................................ATGAGTTGGGTATTGCTGTTGGAGCC.......2611.001000010
.............................TCTGCGCGAACTGAAGGAAGC..................................................................................................................................................................................................................................2111.001010000
.................................................................................................................................................................................................................................................CTATGAGTTGGGTATTGCTGTT.............2211.001010000
...............................................................................................................................................................................................................................................GGCTATGAGTTGGGTATTGCTGTTGGA..........2711.001100000
droBip1
TGGGACGATCGTGCCAACTTTGTAACCCTTCTTCGCGAACTGAAGGAAGCGTAAGTTTTCAA-------------------------------------------------------------TGTCTT--------TGCGGTTTCTGGATCTCATTAAG-----------------------------------------TTTGA------A-TCCT----TCAGTTTCGCTCCCTACGGCTATGAGTTGGGTATTGCTGTTGGAGCTGGAGAGGSizeHit CountTotal NormTotal
No Reads
droKik1
TGGGACGATCGCGCCAACTTTGTGACCCTGCTGCGTGAGCTGAAGGAAGCGTGAGTTTGGGAT--AC----A--------------------------------------------------TCAAAGATTA--------------------AGT-----------------C-----------C----TGAAAATAAT---TTGT------T-TCCTTAACTTAGTTTCGCTCCCTACGGCTATGAGCTGGGCATTGCTGTGGGAGCCGGCGAATSizeHit CountTotal NormTotal
No Reads
droFic1
TGGAACGATCGCGCCAACTTTGTGACCCTGCTGCGTGAACTGAAGGAAGCGTGAGTTGGGGAA--CT--------------------------------------------------------------------------------------CCTTGTGTTTGAACAACCCAT------------------AACTAATTAGTTAT------A-TCCT----TTAGCTTCGCTCCCTATGGTTACGAGTTGAGCATTGCTGTCGGTGCTGGCGAGTSizeHit CountTotal NormTotal
No Reads
droEle1
TGGAACGATCGCTCCAACTTTGTGACCCTGCTGCGCGAGATTAAGGAAGCGTGAGTACTAGTT--CC----ACT-----CTTGGAGGC-----------------------------------------C------T----------------------------------CCG------------------AAATGATTGGGTTT------G-TTCC----ATAGCTTCGCTCCCTATGGCTATGAGTTGGGCATTGCTGTGGGTGCCGGTGAGTSizeHit CountTotal NormTotal
No Reads
droRho1
TGGGATGACCGCGCCAACTTTGTGACCCTGCTGCGCGAGATTAAGGAAGCGTGAGTACTGATT--CC----ACA-----CTGGGAGGT-----------------------------------------------CT----------------------------------CCA------------------AATTAATCGGTTAT------T-TCCT----GCAGCTTTGCTCCCTACGGCTACGAGTTGGGAATTGCTGTGGGTGCCGGCGAGTSizeHit CountTotal NormTotal
No Reads
droBia1
TGGAACGATCGCTCCAACTTTGTGACCCTGCTCCGCGAACTGAAGGAGGCGTGAGTACTGGAT--CC----CTA-----------------------------------------------A--CTTAAAGCCAATC----------------------------------TTA------------------AACTAAGGAGATTT------C-TTTT----GTAGCTTCGCTCCCTATGGCTACGAGCTGAGCATTGCTGTGGGTGCCGGTGAGGSizeHit CountTotal NormTotal
No Reads
droTak1
GATGCGGATCGCGTTAACTTTGTGACCCTGCTGCGAGAGATTAAGGAAACGTGAGTAATTGT--AT-AG-----ATTCTTTGGAAGGC------------------------------------------------T----------------------------------ATAA-CCT------------------AT-ATCGAT------T-ACCT----AAAGCTATGACAAGTATGGATTGGAACTGGGTATTGCTGTGGGTGCCTCCGAGASizeHit CountTotal NormTotal
No Reads
droEug1
TGGAACGATCGTGCCAACTTTGTGACTCTGCTGCGTGAGCTTAAGGAAGCGTAAGTACAAGAT--CT----TTA----------------------------------------------------------------------------------------------------CCTTTA---AGTCCAGG-ATTTCA-T----GT------T-TTCTTCAAACAGTTTCGCTCCCTATGGCTATGAACTGAGCATCGCCGTTGGTGCCGGTGAGGSizeHit CountTotal NormTotal
No Reads
dm3
TGGAACGATCGTGCCAACTTTGTGACTCTGCTGCGCGAGATTAAGGAGGCGTGAGTAGTGGA--G---------------------------------------------------GAGCCACTACCGAAGCATACT----------------------------------TTAGTTTTA-------------AATGA---TTTAT------G-TCCT----ATAGGTTCGCTCCCTATGGCTATGAATTGGGTATTGCGGTGGGCGCCGGTGAATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................GCGCGAGATTAAGGAGGC..................................................................................................................................................................................................................................18113.001300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................CCTATGGCTATGAATTGGGTA.....................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000
.......ATCGTGCCAACTTTGTGACTC........................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TGACTCTGCTGCGCGAGATTA.........................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................GGTATTGCGGTGGGCGCCGGTG...2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
.............................GCTGCGCGAGATTAAGGAG....................................................................................................................................................................................................................................1921.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000020000000
............................................................................................................................................................................................................................................TATGGCTATGAATTGGGTATTGCGGT..............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...............................................................................................................................................................................................................................................................TTGCGGTGGGCGCCGGTG...1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....CGATCGTGCCAACTTTGT.............................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GTGACTCTGCTGCGCGAGATTAAGGAGGC..................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................TCGCTCCCTATGGCTATGAATTGGGTA.....................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................ATTGGGTATTGCGGTGGGCGCC.......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............AACTTTGTGACTCTGCTGCGA................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................ATTGGGTATTGCGGTGGGCGCCG......2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................TTGGGTATTGCGGTGGGCGCC.......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..........................................................................................................................................................................................................................................................GGGTATTGCGGTGGGCGC........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................GGCTATGAATTGGGTATTG..................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................GGGTATTGCGGTGGGCGCCGGG....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................AATTGGGTATTGCGGTGGGCGCCGGT....2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...................TTGTGACTCTGCTGCGC................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................CTGCTGCGCGAGATTAAGGA.....................................................................................................................................................................................................................................2021.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001000000000000
..............................................................................................................................................................................................................................................................ATTGCGGTGGGCGCCGGTG...1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................TGGGTATTGCGGTGGGCGCCG......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..........................................................................................................................................................................................................................................................GGGTATTGCGGTGGGCGCCGG.....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.....CGATCGTGCCAACTTTGTG............................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TGCGCGAGATTAAGGAGGC..................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
..GAACGATCGTGCCAACTTTGT.............................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................ATTGCGGTGGGCGCCGGT....1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................ATTGGGTATTGCGGTGGGC..........1911.0010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TTGTGACTCTGCTGCGCG...............................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GAACGATCGTGCCAACTTTGTGACT.........................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................AATTGGGTATTGCGGTGGGCGCCG......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GACTCTGCTGCGCGAGAT...........................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................AATTGGGTATTGCGGTGGG...........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................CTGCTGCGCGAGATTAAGG......................................................................................................................................................................................................................................1921.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................................................................................................TGGGTATTGCGGTGGGCGCCGG.....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..................TTTGTGACTCTGCTGCGC................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
...................TTGTGACTCTGCTGCGCGAGA............................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TTGTGACTCTGCTGCGCGAGATTA.........................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TTGTGACTCTGCTGCGCGA..............................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GGAACGATCGTGCCAACTTTGT.............................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................ATGAATTGGGTATTGCGGTGGGCGCC.......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...............................................................................................................................................................................................................................................GGCTATGAATTGGGTATTT..................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TCTGCTGCGCGAGATTAAGGA.....................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TGGAACGATCGTGCCAACTTTGTGACTCTGCTGCGTGAGATTAAGGAGGCGTGAGTAGAGGA--G---------------------------------------------------GAGCCACTCCCGAAACGTACT----------------------------------TTAGACTTA---TGT----G------A---TTTAT------G-TCCT----GTAGGTTCGCTCCCTATGGCTATGAGTTGGGTATTGCCGTGGGCGCCGGCGAGTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..GAACGATCGTGCCAACTT................................................................................................................................................................................................................................................................1813.00300300000000000000
...AACGATCGTGCCAACTTT...............................................................................................................................................................................................................................................................1812.00200200000000000000
..............CAACTTTGTGACTCTGCTGCGTG...............................................................................................................................................................................................................................................2311.00100010000000000000
..........................TCTGCTGCGTGAGATTAAGGAGGC..................................................................................................................................................................................................................................2411.00100000000000100000
.................CTTTGTGACTCTGCTGCGTGA..............................................................................................................................................................................................................................................2111.00100100000000000000
....................TGTGACTCTGCTGCGTGAG.............................................................................................................................................................................................................................................1911.00100000000000100000
..........................................................................................................................................................................................................................................................GGGTATTGCCGTGGGCGCCGGCGAGT2611.00100010000000000000
......................................................................................................................................................................................................................................................AGTTGGGTATTGCCGTGGGCGCCGGCGA..2811.00100100000000000000
..GAACGATCGTGCCAACTTTGT.............................................................................................................................................................................................................................................................2111.00101000000000000000
.........CGTGCCAACTTTGTGACT.........................................................................................................................................................................................................................................................1811.00100100000000000000
.......................................................................................................................................................................................................................................................GTTGGGTATTGCCGTGGGCGCCGGC....2511.00100000000000100000
droSec2
TGGAACGATCGTGCCAACTTTGTGACTCTGCTGCGCGAGATTAAGGAAGCGTGAGTAGAGGA--G---------------------------------------------------GAGTCACTCCTAAAACGTACT----------------------------------TTAGATTTA---TGT----G------A---TTTAT------G-TCCT----GTAGGTTCGCTCCCTATGGCTATGAGTTGGGTATTGCCGTGGGCGCCGGTGAGTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................................................................................................................................................................................................................GTTGGGTATTGCCGTGGGC..........1913.0030030
...........................CTGCTGCGCGAGATTAAGGAAG...................................................................................................................................................................................................................................2213.0030030
..........................................................................................................................................................................................................................................................GGGTATTGCCGTGGGCGCCG......2012.0020020
..............CAACTTTGTGACTCTGCTGCGCGAG.............................................................................................................................................................................................................................................2512.0020020
...........................CTGCTGCGCGAGATTAAGGAAGC..................................................................................................................................................................................................................................2312.0020020
...................................................................................................................................................................................................................................................ATGAGTTGGGTATTGCCGTGGGCGCC.......2611.0010010
.................CTTTGTGACTCTGCTGCGCGAGA............................................................................................................................................................................................................................................2311.0010010
..............CAACTTTGTGACTCTGCTGCGC................................................................................................................................................................................................................................................2211.0010010
...........................CTGCTGCGCGAGATTAAGGAA....................................................................................................................................................................................................................................2111.0010010
......................................................................................................................................................................................................................................................AGTTGGGTATTGCCGTGGGCGCCGGTG...2711.0010010
..................TTTGTGACTCTGCTGCGCGA..............................................................................................................................................................................................................................................2011.0010010
.......ATCGTGCCAACTTTGTGACTCTG......................................................................................................................................................................................................................................................2311.0010010
...................................................................................................................................................................................................................................................ATGAGTTGGGTATTGCCGTGGGCGCCG......2711.0010010
............................TGCTGCGCGAGATTAAGGAA....................................................................................................................................................................................................................................2011.0010100
.......ATCGTGCCAACTTTGTGACTCTGCTGC..................................................................................................................................................................................................................................................2711.0010010
...................................................................................................................................................................................................................................................ATGAGTTGGGTATTGCCGTGG............2111.0010010
..............................................................................................................................................................................................................................................................ATTGCCGTGGGCGCCGGTGA..2011.0010010
....................TGTGACTCTGCTGCGCGAGATTAAGGA.....................................................................................................................................................................................................................................2711.0010010
.................CTTTGTGACTCTGCTGCGCGAG.............................................................................................................................................................................................................................................2211.0010010
...................TTGTGACTCTGCTGCGCGAGATTAAGG......................................................................................................................................................................................................................................2711.0010010
..................TTTGTGACTCTGCTGCGCGAG.............................................................................................................................................................................................................................................2111.0010010
..................................................................................................................................................................................................................................................TATGAGTTGGGTATTGCCGTGGGCGCCG......2811.0010010
.....................................................................................................................................................................................................................................CGCTCCCTATGGCTATGAGTTGGGG......................2511.0010010
......................................................................................................................................................................................................................................................AGTTGGGTATTGCCGTGGGCGCCGGT....2611.0010010
..............CAACTTTGTGACTCTGCTGC..................................................................................................................................................................................................................................................2011.0010010
..................TTTGTGACTCTGCTGCGCGAGATTAAG.......................................................................................................................................................................................................................................2711.0010010
...........................................................................................................................................................................................................................................................GGTATTGCCGTGGGCGCCGGTGA..2311.0010010
............................................................................................................................................................................................................................................TATGGCTATGAGTTGGGT......................1811.0010010
.........................CTCTGCTGCGCGAGATTAAGGAAG...................................................................................................................................................................................................................................2411.0010010
.......................................................................................................................................................................................................................................................GTTGGGTATTGCCGTGGGCGCCGGTGA..2711.0010010
................................................................................................................................................................................................................................................................TGCCGTGGGCGCCGGTGAGT2011.0010010
..........................................................................................................................................................................................................................................CCTATGGCTATGAGTTGG........................1811.0010010
...........................................................................................................................................................................................................................................................GGTATTGCCGTGGGCGCCGGT....2111.0010010
............................TGCTGCGCGAGATTAAGGAAGCGTT...............................................................................................................................................................................................................................2511.0010010
............GCCAACTTTGTGACTCTGCTGCGCGA..............................................................................................................................................................................................................................................2611.0010010
.......................................................................................................................................................................................................................................................GTTGGGTATTGCCGTGGGCGCCGGT....2511.0010010
...........................CTGCTGCGCGAGATTAAGG......................................................................................................................................................................................................................................1921.0020020
....................................................................................................................................................................................................................................................TGAGTTGGGTATTGCCGTGGGC..........2211.0010010
.....................................................................................................................................................................................................................................CGCTCCCTATGGCTATGAGTTGGGT......................2511.0010010
droYak3
TGGAACGATCGTGCTAACTTTGTGACTCTGCTGCGCGAGATTAAGGAGGCGTGAGTACAGGAT--CT----A--------------------------------------------------CTCCTTAAGTCT-----------------------------GAG-----TTT------------------AGTTAATGGTTTAT------G-TCCT----GCAGGTTCGCTCCCTATGGCTATGAGTTGGGTATTGCTGTGGGCGCCGGCGAGTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................................................................................................................................................................................................................................................ATGAGTTGGGTATTGCTGT..............1915.00502100020000
.............CTAACTTTGTGACTCTGCTGCGCGA..............................................................................................................................................................................................................................................2513.00301000020000
.........................CTCTGCTGCGCGAGATTAAGGA.....................................................................................................................................................................................................................................2213.00303000000000
.........................................................................................................................................................................................................................................................TGGGTATTGCTGTGGGCGCCGGCGA..2513.00302000010000
...................TTGTGACTCTGCTGCGCGA..............................................................................................................................................................................................................................................1913.00300100020000
..................................................................................................................................................................................................................................................TATGAGTTGGGTATTGCTGTGGG...........2312.00201000010000
...........................................................................................................................................................................................................................................CTATGGCTATGAGTTGGGTATTGCTGT..............2712.00202000000000
..................................................................................................................................................................................................................................................TATGAGTTGGGTATTGCTGT..............2012.00202000000000
.........................................................................................................................................................................................................................................................TGGGTATTGCTGTGGGCGCC.......2012.00200000020000
..............TAACTTTGTGACTCTGCTGCGCGA..............................................................................................................................................................................................................................................2412.00211000000000
.......ATCGTGCTAACTTTGTGAC..........................................................................................................................................................................................................................................................1912.00201000010000
...................TTGTGACTCTGCTGCGCGAGATTAAGGA.....................................................................................................................................................................................................................................2812.00201000010000
.............................................................................................................................................................................................................................................ATGGCTATGAGTTGGGTATTGCT................2312.00201000010000
..........GTGCTAACTTTGTGACTCTGCTGCGCGAG.............................................................................................................................................................................................................................................2912.00200000020000
.................................................................................................................................................................................................................................................CTATGAGTTGGGTATTGCTGT..............2112.00202000000000
.........CGTGCTAACTTTGTGACTCTGCTGC..................................................................................................................................................................................................................................................2512.00220000000000
.................CTTTGTGACTCTGCTGCGC................................................................................................................................................................................................................................................1912.00202000000000
.GGAACGATCGTGCTAACTTTGTGA...........................................................................................................................................................................................................................................................2412.00202000000000
.........................CTCTGCTGCGCGAGATTAAGGAGGC..................................................................................................................................................................................................................................2512.00202000000000
....................................................................................................................................................................................................................................TCGCTCCCTATGGCTATGAGTTGGGT......................2611.00100000010000
...............................................................................................................................................................................................................................................GGCTATGAGTTGGGTATTGCTGT..............2311.00101000000000
..GAACGATCGTGCTAACTTTGTGACT.........................................................................................................................................................................................................................................................2511.00100100000000
...................................................................................................................................................................................................................................................ATGAGTTGGGTATTGCTGTGGG...........2211.00101000000000
.....................................................................................................................................................................................................................................CGCTCCCTATGGCTATGAGTTGGG.......................2411.00100000010000
..................................................................................................................................................................................................................................GTTCGCTCCCTATGGCTATGAGT...........................2311.00101000000000
.........................CTCTGCTGCGCGAGATTAAGGAGG...................................................................................................................................................................................................................................2411.00101000000000
.......................GACTCTGCTGCGCGAGATTAAGGAGG...................................................................................................................................................................................................................................2611.00101000000000
...................TTGTGACTCTGCTGCGCGAGATT..........................................................................................................................................................................................................................................2311.00100000010000
..............................................................................................................................................................................................................................................................ATTGCTGTGGGCGCCGGC....1811.00100100000000
.............CTAACTTTGTGACTCTGCT....................................................................................................................................................................................................................................................1911.00101000000000
...........................................................................................................................................................................................................................................CTATGGCTATGAGTTGGGTATT...................2211.00100000010000
..........GTGCTAACTTTGTGACTCTGCTGC..................................................................................................................................................................................................................................................2411.00101000000000
..........................TCTGCTGCGCGAGATTAAGG......................................................................................................................................................................................................................................2011.00101000000000
..................................GCGAGATTAAGGAGGCGTT...............................................................................................................................................................................................................................1911.00100000010000
....ACGATCGTGCTAACTTTGT.............................................................................................................................................................................................................................................................1911.00101000000000
..................TTTGTGACTCTGCTGCGCGA..............................................................................................................................................................................................................................................2011.00100000010000
....................TGTGACTCTGCTGCGCGAGATTAAGGA.....................................................................................................................................................................................................................................2711.00100000010000
.....................................................................................................................................................................................................................................CGCTCCCTATGGCTATGAGTT..........................2111.00101000000000
..........................................................................................................................................................................................................................................CCTATGGCTATGAGTTGGGTATTGCTGT..............2811.00100000010000
..................TTTGTGACTCTGCTGCGCGAGATTAAGGA.....................................................................................................................................................................................................................................2911.00100000010000
....................TGTGACTCTGCTGCGCGAGA............................................................................................................................................................................................................................................2011.00100000010000
.......................GACTCTGCTGCGCGAGATTAA........................................................................................................................................................................................................................................2111.00101000000000
.............................................................................................................................................................................................................................................................TATTGCTGTGGGCGCCGGC....1911.00101000000000
..................TTTGTGACTCTGCTGCGC................................................................................................................................................................................................................................................1811.00101000000000
........................................................................................................................................................................................................................................................TTGGGTATTGCTGTGGGCGCC.......2111.00101000000000
.............................GCTGCGCGAGATTAAGGAGG...................................................................................................................................................................................................................................2011.00101000000000
................ACTTTGTGACTCTGCTGCGCGAGATT..........................................................................................................................................................................................................................................2611.00101000000000
...............................TGCGCGAGATTAAGGAGGC..................................................................................................................................................................................................................................1911.00101000000000
.............................GCTGCGCGAGATTAAGGAGGCGTT...............................................................................................................................................................................................................................2411.00100000010000
......GATCGTGCTAACTTTGTGACTCTGC.....................................................................................................................................................................................................................................................2511.00100000010000
...............AACTTTGTGACTCTGCTGCGCGA..............................................................................................................................................................................................................................................2311.00100000010000
......GATCGTGCTAACTTTGTGACTCTGCT....................................................................................................................................................................................................................................................2611.00101000000000
............................................................................................................................................................................................................................................................GTATTGCTGTGGGCGCCGGCGA..2211.00101000000000
..........GTGCTAACTTTGTGACTCTGCTGCGCGA..............................................................................................................................................................................................................................................2811.00101000000000
........TCGTGCTAACTTTGTGACTC........................................................................................................................................................................................................................................................2011.00101000000000
...AACGATCGTGCTAACTTTGTGACTCTGCT....................................................................................................................................................................................................................................................2911.00100000010000
..............TAACTTTGTGACTCTGCTGCGC................................................................................................................................................................................................................................................2211.00101000000000
...............AACTTTGTGACTCTGCTGCGC................................................................................................................................................................................................................................................2111.00101000000000
............................TGCTGCGCGAGATTAAGGAGGC..................................................................................................................................................................................................................................2211.00101000000000
............GCTAACTTTGTGACTCTGCTG...................................................................................................................................................................................................................................................2111.00101000000000
...............................................................................................................................................................................................................................................GGCTATGAGTTGGGTATTGCTGTGGG...........2611.00100100000000
...........................................................................................................................................................................................................................................CTATGGCTATGAGTTGGGT......................1911.00100000010000
..............................CTGCGCGAGATTAAGGAGG...................................................................................................................................................................................................................................1911.00101000000000
..............................................................................................................................................................................................................................................................ATTGCTGTGGGCGCCGGCGA..2011.00101000000000
..GAACGATCGTGCTAACTTTGT.............................................................................................................................................................................................................................................................2111.00100000010000
..................................................................................................................................................................................................................................GTTCGCTCCCTATGGCTATGA.............................2111.00101000000000
................................................................................................................................................................................................................................................GCTATGAGTTGGGTATTGCTGTGG............2411.00100000010000
..................................................................................................................................................................................................................................GTTCGCTCCCTATGGCTA................................1811.00101000000000
.......................GACTCTGCTGCGCGAGATTAAGGA.....................................................................................................................................................................................................................................2411.00101000000000
..........................................................................................................................................................................................................................................................GGGTATTGCTGTGGGCGCCGGCGA..2411.00101000000000
..GAACGATCGTGCTAACTTTGTGACTC........................................................................................................................................................................................................................................................2611.00101000000000
...........................CTGCTGCGCGAGATTAAGGAGGC..................................................................................................................................................................................................................................2311.00100000010000
.........CGTGCTAACTTTGTGACTCTGCTGCGC................................................................................................................................................................................................................................................2711.00101000000000
.............................................................................................................................................................................................................................................................TATTGCTGTGGGCGCCGGCG...2011.00101000000000
.................................................................................................................................................................................................................................................CTATGAGTTGGGTATTGCTGTGGG...........2411.00100000010000
...........................CTGCTGCGCGAGATTAAGGA.....................................................................................................................................................................................................................................2020.50110000000000
...........................CTGCTGCGCGAGATTAAGG......................................................................................................................................................................................................................................1920.50101000000000
droEre2
TGGGACGATCGTGCTAACTTTGTCACTCTGCTGCGCGAGATTAAGGAGGCGTGAGTACAGGAT--CT----A--------------------------------------------------CGCCCGAAGCCTACT----------------------------------TTA------------------AGTTAATGGTTTGT------G-TCCT----GCAGGTTCGCTCCCTATGGCTATGAGCTGGGTATTGCGGTGGGCGCCGGCGAGTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........................CTGCTGCGCGAGATTAAGGA.....................................................................................................................................................................................................................................2020.5010000100

Generated: 05/17/2015 at 05:00 AM