ID:

dvi_6448

Coordinate:

scaffold_12875:12345918-12346068 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-25.3 -25.3 -25.1 -25.1

Flybase annnotation

exon [dvir_GLEANR_7239:2]; CDS [Dvir\GJ21916-cds]; intron [Dvir\GJ21916-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ACAAAACCTTAGATGCGTTCTATACAGCTGCGAATAGTGCATACAATCAGGTTGGTTTCTCAATTTCAGTCCTGTCTTAGCATGCGCGTATCATTTGTCACATAACACCAACAAACAATATATATATATATATTTCCTTGAAGAATGGAGATAATGAGTGTAGATAAATATGCATGTAATGTCCTTATCTGCATTTGGTGGAATTCGAATTCGTCAAAATGGATAAGTGTAACTTGTTTTTGAGCAAATAT
**************************************************......((.((((...(((..........(((((((.((((.(((((((.....................(((((.(((.(((((((.........)))))))))).)))))))))))))))).)))).)))......)))...)))).))**************************************************
Read size # Mismatch Hit Count Total Norm Total M047
female body
V116
male body
V047
embryo
M061
embryo
SRR060667
160_females_carcasses_total
SRR060671
9x160_males_carcasses_total
SRR060654
160x9_ovaries_total
SRR060655
9x160_testes_total
SRR060663
160_0-2h_embryos_total
SRR060665
9_females_carcasses_total
SRR060672
9x160_females_carcasses_total
SRR060681
Argx9_testes_total
SRR060658
140_ovaries_total
SRR060661
160x9_0-2h_embryos_total
SRR060664
9_males_carcasses_total
SRR060666
160_males_carcasses_total
SRR060668
160x9_males_carcasses_total
SRR060669
160x9_females_carcasses_total
SRR060678
9x140_testes_total
SRR060688
160_ovaries_total
V053
head
SRR060656
9x160_ovaries_total
.....................ATACAGCTGCGAATAGTGC................................................................................................................................................................................................................... 19 0 1 5.00 5 1 0 1 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................ATACAGCTGCGAATAGTGCATACAATC........................................................................................................................................................................................................... 27 0 1 3.00 3 1 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...AAACCTTAGATGCGTTCTATACAGCT.............................................................................................................................................................................................................................. 26 0 1 2.00 2 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................GTTCTATACAGCTGCGAAT........................................................................................................................................................................................................................ 19 0 1 2.00 2 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................CTATACAGCTGCGAATAGTGC................................................................................................................................................................................................................... 21 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...AAACCTTAGATGCGTTCTATACAGCTGC............................................................................................................................................................................................................................ 28 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................ACAGCTGCGAATAGTGCATAC............................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.........TAGATGCGTTCTATACAGCTGC............................................................................................................................................................................................................................ 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.........................AGCTGCGAATAGTGCATACAATCAGA........................................................................................................................................................................................................ 26 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......CCTTAGATGCGTTCTATA................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....ACCTTAGATGCGTTCTATACAGCTGC............................................................................................................................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........TTAGATGCGTTCTATACAGCTGCGAA......................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............TGCGTTCTATACAGCTGCGAATAGTGC................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............CGTTCTATACAGCTGCGAATAGTGCA.................................................................................................................................................................................................................. 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....................TATACAGCTGCGAATAGTGCATAC............................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................GAATTCGAATTCGTCAAAATGG............................. 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................ATACAGCTGCGAATAGTGCATAC............................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............GCGTTCTATACAGCTGCGAAT........................................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....AACCTTAGATGCGTTCTATACAGCT.............................................................................................................................................................................................................................. 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........TTAGATGCGTTCTATACAGCTGCGAAT........................................................................................................................................................................................................................ 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...............CGTTCTATACAGCTGCGAATAGTGC................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
....................TATACAGCTGCGAATAGTGCATACA.............................................................................................................................................................................................................. 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..................CCTATACAGCTGCGAATAGTGCATAC............................................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................ATCAGGTTGGTTTTTCAATTTCAGTCC................................................................................................................................................................................... 27 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..............GCGTTCTATACAGCTGCGA.......................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................CTATACAGCTGCGAATAGTGCAT................................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............CGTTCTATACAGCTGCGAATAGTGCAT................................................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................GTTCTATACAGCTGCGAATAGTGCAT................................................................................................................................................................................................................. 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
......CCTTAGATGCGTTCTATACAGC............................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TTGGTGGAATTCGAATTCGTC.................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.........TAGATGCGTTCTATACAGCTGCGAATAG...................................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.CAAAACCTTAGATGCGTTCTATACA................................................................................................................................................................................................................................. 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TTCCTTGAAGAATGGAGATAATGAGTG........................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.....................................................................................................................................................................................................GTGGAATTCGAATTCGTCA................................... 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................GTTCTATACAGCTGCGAATAGTGC................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..AAAACCTTAGATGCGTTCTATACAGCTG............................................................................................................................................................................................................................. 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................ACAGCTGCGAATAGTGCATACAATC........................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................TGCGAATAGTGCATACAATC........................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..............GCGTTCTATACAGCTGCGAATAGTGC................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................TGCGAATAGTGCAAACAATC........................................................................................................................................................................................................... 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................GCGTGTAATGTCCTTATCTGC........................................................... 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................GATATTGCCTTGAAGAATGGT...................................................................................................... 21 3 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................ATTGCCTTGAAGAATGGTGTT................................................................................................... 21 3 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................CATGTGGTTGAATTCGAA.......................................... 18 2 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
........................................................................................................................................................................................................GAGTTCGAATTCTTCAAA................................. 18 2 15 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

TGTTTTGGAATCTACGCAAGATATGTCGACGCTTATCACGTATGTTAGTCCAACCAAAGAGTTAAAGTCAGGACAGAATCGTACGCGCATAGTAAACAGTGTATTGTGGTTGTTTGTTATATATATATATATAAAGGAACTTCTTACCTCTATTACTCACATCTATTTATACGTACATTACAGGAATAGACGTAAACCACCTTAAGCTTAAGCAGTTTTACCTATTCACATTGAACAAAAACTCGTTTATA
**************************************************......((.((((...(((..........(((((((.((((.(((((((.....................(((((.(((.(((((((.........)))))))))).)))))))))))))))).)))).)))......)))...)))).))**************************************************
Read size # Mismatch Hit Count Total Norm Total M047
female body
M027
male body
SRR060659
Argentina_testes_total
SRR060665
9_females_carcasses_total
SRR060675
140x9_ovaries_total
V116
male body
SRR060678
9x140_testes_total
V053
head
SRR060662
9x160_0-2h_embryos_total
SRR060674
9x140_ovaries_total
SRR060682
9x140_0-2h_embryos_total
.......................................................AAAGAGGTAAAGTCAGGA.................................................................................................................................................................................. 18 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...........................................GTTAGTCCAACCAAAGAGTTA........................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
....................................................................CAGGACAGAATTGTACGCGC................................................................................................................................................................... 20 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
......................................................................GGACAGAATCGTACGCGCATA................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
......................................................................GGACAGAATCGTACGCGCAT................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...TTTGGAATCTACGCAAGATAT................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................CTTCTTACCTCTATTACTC............................................................................................. 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TTGAGCAGTTTTACCTAT.......................... 18 1 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0
..........................................CGTTAGGCCAACCAAAGA............................................................................................................................................................................................... 18 2 4 0.50 2 0 2 0 0 0 0 0 0 0 0 0
........................................................................................................TGTGGTTGTTTCTTGTATATA.............................................................................................................................. 21 2 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0
..............................................................................................................................................................................TCATTACAGGAATGGTCGTA......................................................... 20 3 9 0.22 2 0 1 0 0 0 1 0 0 0 0 0
........................GTCTAGGTTTATCACGTATGT.............................................................................................................................................................................................................. 21 3 7 0.14 1 0 0 0 0 0 0 0 1 0 0 0
.....................................................................................................................................................................................TGGAATAGACCTAAACCAG................................................... 19 3 19 0.05 1 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................TGGGCGTGAACCACCTTAA.............................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0
...............................................................................................ACAGTTTATTGTGGTGGGTT........................................................................................................................................ 20 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................ATTACTCACACCTATTCGT................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0
...........................................................AGTTAAAGACAGCACAGAA............................................................................................................................................................................. 19 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12875:12345868-12346118 + dvi_6448 ACAAAACCTTAGATGCGTTCTATACAGCTGCGAATAGTGCATACAATCAGGTTGGTTTCTCAATT-------------------------------------TCAGTCCTGTCTTAGC----ATGCGCGTATCATTTGTCACATAACACC---AACAA------ACAATATATATATATATATTTCCTTGAAGAATGGAGATAATGAGTGTAGATAAATATGCATGTAATGTCCTTATCTGCAT-TTGGTGGAATTCGAAT-T--------------------------CGT------------------------------------------------C---------AA---AATGGATAAGTGTAACTTG-------------------TTTTTGAGCAAATAT
droMoj3 scaffold_6500:30187091-30187257 - ATAAAAATAATAATAAAT---ATATATATATATA----------------------------------------------------------------------------------------------------------------------------------------------------TTACCAA------------TCATAAAT---------------------------------AATTAATTCCTCTATATGT-CAATAAAT-----------------ACTGCTTATAATTATTTATTTGAAGAGGAGCCTTCATTCGGTGGTAAACTCTTCAAATTTGCCCAACTAATGCAAAATTTTTACTTT---------------------------TTCATGA
droGri2 scaffold_15245:8009082-8009235 - ACTCTAGTTTAGAGGAATTCTATACGGCTGCCAATAATGCATACACTCAGGTGCGTTT-TCACAA-----------------------------------TTTGTGCATTGTTTTTGCCAAAATGTGAACATA-----TCTAATTAATAATTA---------------------------------------------CGTGCACATAAGTATGTAGATACAT--GCAATA-------------------------------------------------------------------T---------------------------------------------------------------A-TA-----------------------------------TATGTAT
droWil2 scf2_1100000004954:2211031-2211196 + TATATTTTTA---TATTTTCCATGCGGGGTAATACAG-----A--------------------------------------TAATA---AGTAT---------------------------------------TGTCATATTATCAAATA------------------------------------------------------TATTC---------------------------------AGGTTTTTATACCATACAC-CCATAGGGTGAAATGGTATATTAAAGTCGC------------------------------------------------C---------AA---AATGTATG-----TAACA-GGCAGAAGGAAGCATCTCCGACCCCACAACATAT
dp5 3:97358-97414 + ACCATTCTCTGGAAGATTTTTATGCAGCTGCGAATAGAGCGTACAATCAGGTTAGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_2:285434-285490 + ACCATTCTCTGGAAGATTTTTATGCAGCTGCGAATAGAGCGTACAATCAGGTTAGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13266:19484332-19484383 + ACCATACTTTGGACGAGTTTTATACAGCTGCAAACAGAGCCTACAATCAGGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000395864:18177-18405 + ACCATACTTTGGAAGAGTTTTATACAGCAGCAAACAGAGCCTACAATCAGGTATGTCT----ATTCCAGGGGTGCTCAAATTCGTCTTATGGCAGCACCCCTGGTCTATTCTATTACTTAGTAAGCTTACATT-----TTTTTTTAAAGATTTTCTATTTGGTACATATACATACATA----C----------------------------------------ATGTAATAAAAAGATCAACTT-TTAGTCAAACCCTGCATA--------------------------AAT------------------------------------------------G---------CA---AATGTATAAGTACA---------------------------------------
droKik1 scf7180000298808:33043-33099 - ACCATTCATTGGAGGACTTTTATACAGCCGCAAATAGAGCGTACAAACAGGTTAGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000449205:11619-11675 - ACCATTCCTTGGAAGATTTTTATACAGCTGCCAACAGGGCGTACAATCAGGTAAGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000490719:59278-59333 + ACAATTCCTTGGAGGAGTTTTATGCAGCTGCAAATAGAGCGTACAATCAGGTAAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000775507:961-1028 + AAAAAATATATATATATATA------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTAAATAAAAATGGCTATTCTAAAGGCAATTAGAGACACGTATGA---------------------------------------------------------------------T-------------------------------------------------------------------------------------------------------------
droBia1 scf7180000301381:11961-12018 - ACCATTCCTTGCAAGATTTTTATACAGCCGCCAATAGAGCGTACAATCAAGTAATTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000412777:22921-23027 + AAAAACGGAAAAAAGTGGGGTGGCC---------GGG-----T--------------------------------------TGACA---TGGAA---------------------------------------------------------------------------------------------------------------------------------------CGTC-CCATATATAC-TTTATGTACCCGTTAC-TCGTAAAGTAAACGGGTATAATATATTCGT------------------------------------------------G------------------------------------------------------------CAAAAGT
droEug1 scf7180000408984:548828-548882 - ATATAT-------------ATATATATATATATATGAAATA----------------------------------------------------------------------------------------------------------------------------------------------------------------TATTAAATATATATATATATATATATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chr2R:75258-75314 - ACCATTCGTTGGAAGATTTTTATGCAGCTGCAAATAGAGCATACAATCAGGTATGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 2r:156227-156290 - ACCATTCGTTGGAAGATTTTTATGCAGCTGCAAATAGAGCATACAATCAGGTATGTT-CTCTATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_153:14617-14680 - ACCATTCGTTGGAAGATTTTTATGCAGCTGCAAATAGAGCATACAATCAGGTATGTT-CTCTATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 v2_chr2h_random_004:687077-687195 - AATAATATATATATATATAATATAT-----------------A--------------------------------------TAATA---TATAT---------------------------------------ATATATAATAATATATA---TATAT------ATAATATATATATATATAT----------------AATAATATATATATAAAATTATAT-------------------------------------------------------------------------------------------------------------------------------------------A-TATATAATCC---------------------------TATATAT
droEre2 scaffold_4845:1437437-1437494 - ACCACTCTTTGGAAGATTTTTATGCAGCAGCAAATAGAGCATACAACCAGGTACGTCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
ACAAAACCTTAGATGCGTTCTATACAGCTGCGAATAGTGCATACAATCAGGTTGGTTTCTCAATT-------------------------------------TCAGTCCTGTCTTAGC----ATGCGCGTATCATTTGTCACATAACACC---AACAA------ACAATATATATATATATATTTCCTTGAAGAATGGAGATAATGAGTGTAGATAAATATGCATGTAATGTCCTTATCTGCAT-TTGGTGGAATTCGAAT-T--------------------------CGT------------------------------------------------C---------AA---AATGGATAAGTGTAACTTG-------------------TTTTTGAGCAAATATSizeHit CountTotal NormTotalM027
Male-body
M028
Head
M047
Female-body
M061
Embryo
SRR060654
Ovary
SRR060655
Testis
SRR060656
Ovary
SRR060657
Testis
SRR060658
Ovary
SRR060659
Testis
SRR060660
Ovary
SRR060661
Embryo
SRR060662
Embryo
SRR060663
Embryo
SRR060664
Male-body
SRR060665
Female-body
SRR060666
Male-body
SRR060667
Female-body
SRR060668
Male-body
SRR060669
Female-body
SRR060670
Testis
SRR060671
Male-body
SRR060672
Female-body
SRR060673
Ovary
SRR060674
Ovary
SRR060675
Ovary
SRR060676
Ovary
SRR060677
Ovary
SRR060678
Testis
SRR060679
Testis
SRR060680
Testis
SRR060681
Testis
SRR060682
Embryo
SRR060683
Testis
SRR060684
Embryo
SRR060685
Embryo
SRR060686
Embryo
SRR060687
Embryo
SRR060688
Ovary
SRR060689
Testis
SRR1106712
embryo_0-2h
SRR1106713
embryo_0-2h
SRR1106714
embryo_2-4h
SRR1106715
embryo_4-6h
SRR1106716
embryo_4-6h
SRR1106717
embryo_6-8h
SRR1106718
embryo_6-8h
SRR1106719
embryo_8-10h
SRR1106720
embryo_8-10h
SRR1106721
embryo_10-12h
SRR1106722
embryo_10-12h
SRR1106723
embryo_12-14h
SRR1106724
embryo_12-14h
SRR1106725
embryo_14-16h
SRR1106726
embryo_14-16h
SRR1106727
larvae
SRR1106728
larvae
SRR1106729
mixed whole adult body
SRR1106730
embryo_16-30h
V047
Embryo
V053
Head
V116
Male-body
GSM1528803
follicle cells
.....................ATACAGCTGCGAATAGTGC................................................................................................................................................................................................................................................................................................................................................................................1915.005001002000000010000000000000000000000000000000000000000000001000
.....................ATACAGCTGCGAATAGTGCATACAATC........................................................................................................................................................................................................................................................................................................................................................................2713.003001000000001000000000000000000000000000000000000000000000001000
...AAACCTTAGATGCGTTCTATACAGCT...........................................................................................................................................................................................................................................................................................................................................................................................2612.002001000000000000000000100000000000000000000000000000000000000000
................GTTCTATACAGCTGCGAAT.....................................................................................................................................................................................................................................................................................................................................................................................1912.002000000000000010000000000000000000000000000000000000000000000010
...................CTATACAGCTGCGAATAGTGC................................................................................................................................................................................................................................................................................................................................................................................2112.002001000000000000000000000000000000000000000000000000000000001000
...AAACCTTAGATGCGTTCTATACAGCTGC.........................................................................................................................................................................................................................................................................................................................................................................................2812.002002000000000000000000000000000000000000000000000000000000000000
.......................ACAGCTGCGAATAGTGCATAC............................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000010000000000000000000000000000000000000000000000
.........TAGATGCGTTCTATACAGCTGC.........................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000100000000000000000000000000000000000000000000
.........................AGCTGCGAATAGTGCATACAATCAGA.....................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000010000000000000000000000000000000000000000
......CCTTAGATGCGTTCTATA................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000001000
.....ACCTTAGATGCGTTCTATACAGCTGC.........................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000010
........TTAGATGCGTTCTATACAGCTGCGAA......................................................................................................................................................................................................................................................................................................................................................................................2611.001000010000000000000000000000000000000000000000000000000000000000
.............TGCGTTCTATACAGCTGCGAATAGTGC................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
...............CGTTCTATACAGCTGCGAATAGTGCA...............................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000100000000000000000000000000000000000000000000000
....................TATACAGCTGCGAATAGTGCATAC............................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000001000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................GAATTCGAAT-T--------------------------CGT------------------------------------------------C---------AA---AATGG................................................2211.001000100000000000000000000000000000000000000000000000000000000000
.....................ATACAGCTGCGAATAGTGCATAC............................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000001000
..............GCGTTCTATACAGCTGCGAAT.....................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
....AACCTTAGATGCGTTCTATACAGCT...........................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
........TTAGATGCGTTCTATACAGCTGCGAAT.....................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000001000000000000000000000000
...............CGTTCTATACAGCTGCGAATAGTGC................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000010000000000000000000000000000000000000000
....................TATACAGCTGCGAATAGTGCATACA...........................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000010000000000000000000000000000000
..............GCGTTCTATACAGCTGCGA.......................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
...................CTATACAGCTGCGAATAGTGCAT..............................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
...............CGTTCTATACAGCTGCGAATAGTGCAT..............................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
................GTTCTATACAGCTGCGAATAGTGCAT..............................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000010000000000000000000000000000000000000000000
......CCTTAGATGCGTTCTATACAGC............................................................................................................................................................................................................................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................TTGGTGGAATTCGAAT-T--------------------------CGT------------------------------------------------C---------..........................................................2111.001000000001000000000000000000000000000000000000000000000000000000
.........TAGATGCGTTCTATACAGCTGCGAATAG...................................................................................................................................................................................................................................................................................................................................................................................2811.001000010000000000000000000000000000000000000000000000000000000000
.CAAAACCTTAGATGCGTTCTATACA..............................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................TTCCTTGAAGAATGGAGATAATGAGTG......................................................................................................................................................................................................2711.001000000000000000000000000000010000000000000000000000000000000000
........................................................................................................................................................................................................................................................GTGGAATTCGAAT-T--------------------------CGT------------------------------------------------C---------A.........................................................1911.001000000000000000001000000000000000000000000000000000000000000000
................GTTCTATACAGCTGCGAATAGTGC................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
..AAAACCTTAGATGCGTTCTATACAGCTG..........................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000001000000000000000000000000000000000000000000000
.......................ACAGCTGCGAATAGTGCATACAATC........................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000010
............................TGCGAATAGTGCATACAATC........................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
..............GCGTTCTATACAGCTGCGAATAGTGC................................................................................................................................................................................................................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
droMoj3
ATAAAAATAATAATAAAT---ATATATATATATA----------------------------------------------------------------------------------------------------------------------------------------------------TTACCAA------------TCATAAAT---------------------------------AATTAATTCCTCTATATGT-CAATAAAT-----------------ACTGCTTATAATTATTTATTTGAAGAGGAGCCTTCATTCGGTGGTAAACTCTTCAAATTTGCCCAACTAATGCAAAATTTTTACTTT---------------------------TTCATGASizeHit CountTotal NormTotalM046
Female-body
V041
Embryo
V049
Head
V056
Head
M060
Embryo
V110
Male-body
...............................................................................................................................................................................................................................................................................................................TATTTGAAGAGGAGCCTTCATTCGGTGT.............................................................................2811.001000001
droGri2
ACTCTAGTTTAGAGGAATTCTATACGGCTGCCAATAATGCATACACTCAGGTGCGTTT-TCACAA-----------------------------------TTTGTGCATTGTTTTTGCCAAAATGTGAACATA-----TCTAATTAATAATTA---------------------------------------------CGTGCACATAAGTATGTAGATACAT--GCAATA-------------------------------------------------------------------T---------------------------------------------------------------A-TA-----------------------------------TATGTATSizeHit CountTotal NormTotalM041
Female-body
V109
Male-body
...................CTATACGGCTGCCAATAATGCATA.............................................................................................................................................................................................................................................................................................................................................................................2411.00110
.....................ATACGGCTGCCAATAATG.................................................................................................................................................................................................................................................................................................................................................................................1811.00110
droWil2
TATATTTTTA---TATTTTCCATGCGGGGTAATACAG-----A--------------------------------------TAATA---AGTAT---------------------------------------TGTCATATTATCAAATA------------------------------------------------------TATTC---------------------------------AGGTTTTTATACCATACAC-CCATAGGGTGAAATGGTATATTAAAGTCGC------------------------------------------------C---------AA---AATGTATG-----TAACA-GGCAGAAGGAAGCATCTCCGACCCCACAACATATSizeHit CountTotal NormTotalM020
Head
M045
Female-body
V117
Male-body
V118
Embryo
V119
Head
................................................................................................................................................................................................................................................................................................................................................................................TAACA-GGCAGAAGGAAGCATCTCC...............24204.4589000890
..........................................................................................................................................................................................................................................................................................................................................................................G-----TAACA-GGCAGAAGGAAGCATCTCCG..............26200.20404000
..........................................................................................................................................................................................................................................................................................................................................................................G-----TAACA-GGCAGAAGGAAGCATCTC................24200.20400040
....................................................................................................................................................................................................................................................................................................................................................C---------AA---AATGTATG-----TAACA-GGCAGAAGGA........................26200.15300030
...................................................................................................................................................................................................................................................................................................C------------------------------------------------C---------AA---AATGTATG-----TAACA-GGCA..............................21200.05110000
...............................................................................................................................................................................................................................................................................................................................................................A---AATGTATG-----TAACA-GGCAGAAGGAA.......................25200.05100100
dp5
ACCATTCTCTGGAAGATTTTTATGCAGCTGCGAATAGAGCGTACAATCAGGTTAGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body
M040
Female-body
M059
Embryo
M062
Head
V043
Embryo
V051
Head
V112
Male-body
SRR902010
Ovary
SRR902011
Testis
SRR902012
CNS imaginal disc
.................TTTTATGCAGCTGCGAATAGAGC................................................................................................................................................................................................................................................................................................................................................................................2312.0020200000000
..............GATTTTTATGCAGCTGCGAATAGAGC................................................................................................................................................................................................................................................................................................................................................................................2612.0020110000000
...............ATTTTTATGCAGCTGCGAATAGAGCGTA.............................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
.....TCTCTGGAAGATTTTTATGC...............................................................................................................................................................................................................................................................................................................................................................................................2011.0010000001000
...ATTCTCTGGAAGATTTTTATGCA..............................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.....TCTCTGGAAGATTTTTATGCAGCTGC.........................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000001
..............GATTTTTATGCAGCTGCGA.......................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
..........GGAAGATTTTTATGCAGCTGCGAAT.....................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
..................TTTATGCAGCTGCGAATAGAG.................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100000
..............GATTTTTATGCAGCTGCGAAT.....................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...................TTATGCAGCTGCGAATAGAGC................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.....................ATGCAGCTGCGAATAGAGCGTAC............................................................................................................................................................................................................................................................................................................................................................................2311.0010000010000
...............................GAATAGAGCGTACAATCAGGT....................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
................TTTTTATGCAGCTGCGAATAGAGC................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.....................ATGCAGCTGCGAATAGAGC................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
droPer2
ACCATTCTCTGGAAGATTTTTATGCAGCTGCGAATAGAGCGTACAATCAGGTTAGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo
M042
Female-body
V042
Embryo
V050
Head
V057
Head
V111
Male-body
...........GAAGATTTTTATGCAGCTGC.........................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
..CATTCTCTGGAAGATTTTTATGCAGCT...........................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
....................TATGCAGCTGCGAATAGAGC................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
droAna3
ACCATACTTTGGACGAGTTTTATACAGCTGCAAACAGAGCCTACAATCAGGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body
M058
Embryo
V039
Embryo
V055
Head
V105
Male-body
V106
Head
.....................ATACAGCTGCAAACAGAGCCT..............................................................................................................................................................................................................................................................................................................................................................................2113.003000030
......CTTTGGACGAGTTTTATACAGC............................................................................................................................................................................................................................................................................................................................................................................................2212.002020000
................GTTTTATACAGCTGCAAACAGAGC................................................................................................................................................................................................................................................................................................................................................................................2412.002011000
..CATACTTTGGACGAGTTTTATACAGCT...........................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
....................TATACAGCTGCAAACAGAGC................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
..........GGACGAGTTTTATACAGCTGC.........................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
...ATACTTTGGACGAGTTTTATACAGC............................................................................................................................................................................................................................................................................................................................................................................................2511.001000010
........TTGGACGAGTTTTATACAGCTGCA........................................................................................................................................................................................................................................................................................................................................................................................2411.001000010
..............GAGTTTTATACAGCTGCAAACAGAGC................................................................................................................................................................................................................................................................................................................................................................................2611.001000010
...............................AAACAGAGCCTACAATCAGA.....................................................................................................................................................................................................................................................................................................................................................................2011.001100000
........TTGGACGAGTTTTATACAGCTGC.........................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
..........GGACGAGTTTTATACAGCTGCAAACAG...................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
.............CGAGTTTTATACAGCTGCAAACAGAGC................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
.......................ACAGCTGCAAACAGAGCCTAC............................................................................................................................................................................................................................................................................................................................................................................2111.001010000
............................TGCAAACAGAGCCTACAATC........................................................................................................................................................................................................................................................................................................................................................................2011.001010000
....................TATACAGCTGCAAACAGAGCC...............................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.....................ATACAGCTGCAAACAGAGCCTAC............................................................................................................................................................................................................................................................................................................................................................................2311.001010000
.........TGGACGAGTTTTATACAGCTGCAAACA....................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
...........GACGAGTTTTATACAGCTGCAAAC.....................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
....................TATACAGCTGCAAACAGAGCCTACAAT.........................................................................................................................................................................................................................................................................................................................................................................2711.001100000
......................TACAGCTGCAAACAGAGCC...............................................................................................................................................................................................................................................................................................................................................................................1911.001100000
............................TGCAAACAGAGCCTACAATCAG......................................................................................................................................................................................................................................................................................................................................................................2211.001000001
........................CAGCTGCAAACAGAGCCTACAAT.........................................................................................................................................................................................................................................................................................................................................................................2311.001000001
ACCATACTTTGGACGAGTT.....................................................................................................................................................................................................................................................................................................................................................................................................1930.331010000
...ATACTTTGGACGAGTTTTATAC...............................................................................................................................................................................................................................................................................................................................................................................................2230.331000010
droBip1
ACCATACTTTGGAAGAGTTTTATACAGCAGCAAACAGAGCCTACAATCAGGTATGTCT----ATTCCAGGGGTGCTCAAATTCGTCTTATGGCAGCACCCCTGGTCTATTCTATTACTTAGTAAGCTTACATT-----TTTTTTTAAAGATTTTCTATTTGGTACATATACATACATA----C----------------------------------------ATGTAATAAAAAGATCAACTT-TTAGTCAAACCCTGCATA--------------------------AAT------------------------------------------------G---------CA---AATGTATAAGTACA---------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
ACCATTCATTGGAGGACTTTTATACAGCCGCAAATAGAGCGTACAAACAGGTTAGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
ACCATTCCTTGGAAGATTTTTATACAGCTGCCAACAGGGCGTACAATCAGGTAAGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
ACAATTCCTTGGAGGAGTTTTATGCAGCTGCAAATAGAGCGTACAATCAGGTAAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
AAAAAATATATATATATATA------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTAAATAAAAATGGCTATTCTAAAGGCAATTAGAGACACGTATGA---------------------------------------------------------------------T-------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
ACCATTCCTTGCAAGATTTTTATACAGCCGCCAATAGAGCGTACAATCAAGTAATTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
AAAAACGGAAAAAAGTGGGGTGGCC---------GGG-----T--------------------------------------TGACA---TGGAA---------------------------------------------------------------------------------------------------------------------------------------CGTC-CCATATATAC-TTTATGTACCCGTTAC-TCGTAAAGTAAACGGGTATAATATATTCGT------------------------------------------------G------------------------------------------------------------CAAAAGTSizeHit CountTotal NormTotal
No Reads
droEug1
ATATAT-------------ATATATATATATATATGAAATA----------------------------------------------------------------------------------------------------------------------------------------------------------------TATTAAATATATATATATATATATATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
ACCATTCGTTGGAAGATTTTTATGCAGCTGCAAATAGAGCATACAATCAGGTATGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary
GSM154620
Ovary
GSM154621
Ovary
GSM154622
Ovary
GSM180328
Head
GSM180329
Mixed-body
GSM180330
Embryo
GSM180331
Embryo
GSM180332
Embryo
GSM180333
Embryo
GSM180334
Larvae
GSM180335
Disc
GSM180336
Pupae
GSM180337
S2
GSM231091
Ovary
GSM239041
Head
GSM239050
Head
GSM239051
S2
GSM239052
S2
GSM246084
Head
GSM266765
S2
GSM280082
Ovary
GSM280083
Ovary
GSM280084
Ovary
GSM280085
Testis
GSM280086
Ovary
GSM280087
S2-NP
GSM280088
S2-NP
GSM312995
Head
GSM313160
Head
GSM313161
Head
GSM313162
Head
GSM313163
Head
GSM313164
Head
GSM313165
Head
GSM343287
Embryo
GSM379050
Ovary
GSM379051
Ovary
GSM379052
Ovary
GSM379053
Ovary
GSM379054
Ovary
GSM379055
Ovary
GSM379056
Ovary
GSM379057
Ovary
GSM379058
Ovary
GSM379059
Ovary
GSM379060
Ovary
GSM379061
Ovary
GSM379062
Ovary
GSM379063
Ovary
GSM379064
Ovary
GSM379065
Ovary
GSM379066
Ovary
GSM379067
Ovary
GSM424739
S2
GSM424740
S2
GSM424741
S2
GSM467729
Female-body
GSM467730
Female-body
GSM467731
Female-body
M002
CS
M003
Male-body
M004
Male-body
M005
ML-DmD32
M006
ML-DmD32
M029
OSC
M030
OSC
M031
OSC
M032
S2-R+
M033
S2-R+
M034
S2-R+
M035
S2-R+
M036
S2-R+
M037
S2-R+
M038
S2-R+
M039
S2-R+
M048
S2-R+
OSS2
OSS
OSS6
OSS
OSS7
OSS
OSS8
OSS
S1
Head
S10
Embryo
S11
Embryo
S12
Embryo
S13
Embryo
S14
Embryo
S15
S2-GMR
S16
Kc
S17
Larvae
S18
Larvae
S19
Pupae
S2
Head
S20
Pupae
S21
Disc
S22
Head
S23
Female-body
S24
Male-body
S25
Larvae
S26
Larvae
S27
Pupae
S28
Pupae
S29
Head
S3
Male-body
S30
S2-GMR
S31
S2
S32
S2
S33
Kc
S34
Kc
S35
Kc
S4
Female-body
S5
Disc
S6
Embryo
S7
Embryo
S8
S2
S9
Embryo
SRR001337
Head
SRR001338
Head
SRR001339
Head
SRR001340
Head
SRR001341
Head
SRR001342
Head
SRR001343
Head
SRR001344
Head
SRR001345
Head
SRR001346
Head
SRR001347
Head
SRR001348
Head
SRR001349
Head
SRR001664
Head
SRR010951
Ovary
SRR010952
Ovary
SRR010953
Ovary
SRR010954
Ovary
SRR010955
Ovary
SRR010956
Ovary
SRR010957
Ovary
SRR010958
Ovary
SRR010959
Ovary
SRR010960
Ovary
SRR014268
Embryo
SRR014269
Embryo
SRR014270
Embryo
SRR014271
Embryo
SRR014272
Embryo
SRR014273
Ovary
SRR014274
Ovary
SRR014275
Ovary
SRR014276
Ovary
SRR014277
Ovary
SRR014278
Ovary
SRR014279
Ovary
SRR014280
Ovary
SRR014281
Ovary
SRR014282
Ovary
SRR023197
S2
SRR023399
S2
SRR023400
S2
SRR023402
S2
SRR023407
S2
SRR029028
S2
SRR029029
S2
SRR029030
S2
SRR029031
S2
SRR029032
S2
SRR029033
S2
SRR029608
Head
SRR029633
Head
SRR030145
gb3
SRR031692
Head
SRR031693
Head
SRR031694
Head
SRR031696
Head
SRR031697
Head
SRR031698
Head
SRR031699
Head
SRR031700
Head
SRR031701
Head
SRR031702
Head
SRR031703
Head
SRR031704
Head
SRR032092
S2
SRR032093
S2
SRR032094
S2
SRR032095
S2-NP
SRR032096
S2-NP
SRR032152
Head
SRR060643
Testis
SRR060644
Ovary
SRR060645
Testis
SRR060646
Ovary
SRR060647
Ovary
SRR060648
Ovary
SRR060649
Ovary
SRR060650
Testis
SRR060651
Ovary
SRR060652
Testis
SRR060653
Ovary
SRR065151
Ovary
SRR065152
Ovary
SRR065153
Ovary
SRR065154
Ovary
SRR065155
Ovary
SRR065800
Ovary
SRR065801
Ovary
SRR065802
Ovary
SRR065803
Ovary
SRR065804
Ovary
SRR065805
Ovary
SRR065806
Ovary
SRR065807
Ovary
SRR097865
S2-NP
SRR097866
S2-NP
SRR097867
S2-NP
SRR298536
Ovary
SRR298537
Ovary
SRR298711
Ovary
SRR298712
Ovary
SRR317110
Ovary
SRR317111
Ovary
SRR317112
Ovary
SRR317113
Ovary
SRR317114
Ovary
SRR317115
Ovary
SRR317116
Ovary
SRR317117
Ovary
SRR341115
S2
SRR341116
S2
SRR341117
S2
SRR341118
S2
SRR351332
Mixed-body
SRR351333
Mixed-body
T004
OSC
T005
CME-L1
V001
Embryo
V002
Embryo
V003
S2
V006
Female-body
V007
Head
V008
S2
V009
CME-L1
V010
ML-DmD20-C5
V011
Sg4
V012
Male-body
V013
Head
V014
DTT
V015
DreRFHV
V018
Kc167
V019
GM2
V020
S2-R+
V021
ML-DmD21
V022
ML-DmD32
V023
Head
V024
Kc167
V025
S2-R+
V026
1182-2H
V027
ML-DmD21
V028
CME-W1-Cl.8+
V029
ML-DmD9
V030
ML-DmD8
V031
GM2
V032
S1
V033
CME-W1-Cl.8+
V034
ML-DmD16-C3
V035
ML-DmD32
V036
ML-DmD20-C5
V037
S2
V038
S2
V063
Ovary
V0632
Ovary
V064
Ovary
V0642
Ovary
V065
Ovary
V0652
Ovary
V066
Ovary
V0662
Ovary
V067
S2-NP
V073
mbn2
V074
S3
V075
ML-DmBG1-C1
V076
ML-DmBG3-C2
V077
Head
V078
Head
V079
Head
V080
Head
V081
Embryo
V082
Embryo
V083
Male-body
V084
Female-body
V085
CME-W2
V086
Female-body
V088
Ovary
V0882
Ovary
V089
Ovary
V0892
Ovary
V090
Male-body
V091
fGS/OSS
V092
Male-body
V093
Male-body
V094
S2-R+
V095
S2-R+
V096
Ovary
V097
Ovary
V098
Ovary
V125
ML-DmD9
V126
CME-L1
V127
G2
V128
S3
V129
ML-DmBG1-C1
V130
ML-DmBG3-C2
V131
ML-DmD16-C3
V132
ML-DmD32
V133
Sg4
V134
ML-DmD8
V135
CME-W2
V136
Male-body
V137
Head
V138
Male-body
V139
Female-body
V140
Female-body
V141
Female-body
V142
Female-body
V144
OSC
V145
S2
V146
S1
V147
1182-2H
V148
mbn2
GSM1528798
follicle cells
...ATTCGTTGGAAGATTTTTATGC...............................................................................................................................................................................................................................................................................................................................................................................................22130.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000284015000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
....TTCGTTGGAAGATTTTTATGCAGCTGC.........................................................................................................................................................................................................................................................................................................................................................................................27110.00100000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000001004000000000000200100000
.....................ATGCAGCTGCAAATAGAGCATAC............................................................................................................................................................................................................................................................................................................................................................................23110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003501000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
....................TATGCAGCTGCAAATAGAGCATA.............................................................................................................................................................................................................................................................................................................................................................................2316.0060000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...ATTCGTTGGAAGATTTTTATGCAGC............................................................................................................................................................................................................................................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.................TTTTATGCAGCTGCAAATAGAGCA...............................................................................................................................................................................................................................................................................................................................................................................2415.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000020000000000000000200000000
.....................ATGCAGCTGCAAATAGAGCATACAATC........................................................................................................................................................................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TGCAGCTGCAAATAGAGCATA.............................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TTTTTATGCAGCTGCAAATAGAGCA...............................................................................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000100100000
.....................ATGCAGCTGCAAATAGAGCAT..............................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010000000000000000000000000000
.................TTTTATGCAGCTGCAAATAGAGC................................................................................................................................................................................................................................................................................................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000
...................TTATGCAGCTGCAAATAGAGC................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000
.........TGGAAGATTTTTATGCAGCTGCAAA......................................................................................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000
..................TTTATGCAGCTGCAAATAGAGC................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................AGCTGCAAATAGAGCATACAATC........................................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............GATTTTTATGCAGCTGCAAATAGAGC................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TTTATGCAGCTGCAAATAGAGCAT..............................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CCATTCGTTGGAAGATTTTTATGCAGC............................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000001000000000000000000000000
..............GATTTTTATGCAGCTGCAAAT.....................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TTTTATGCAGCTGCAAATAGAGCATA.............................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................AGCTGCAAATAGAGCATACA...........................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...ATTCGTTGGAAGATTTTTATGCAGCTGC.........................................................................................................................................................................................................................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................ATGCAGCTGCAAATAGAGCATA.............................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................AAATAGAGCATACAATCAGGTATGT................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CCATTCGTTGGAAGATTTTT...................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GCAGCTGCAAATAGAGCATA.............................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000001000000000000
...............ATTTTTATGCAGCTGCAAATAGAGCATA.............................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
ACCATTCGTTGGAAGATTTTTATGCAGC............................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......CGTTGGAAGATTTTTATGC...............................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000010000000
...............................AAATAGAGCATACAATCAGA.....................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
................................AATAGAGCATACAATCAG......................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000
.........................AGCTGCAAATAGAGCATAC............................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TTTTTATGCAGCTGCAAATAGAGC................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
ACCATTCGTTGGAAGATTTTT...................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TTCGTTGGAAGATTTTTA..................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TCGTTGGAAGATTTTTATGC...............................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
ACCATTCGTTGGAAGATTTTTATGC...............................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.....TCGTTGGAAGATTTTTATGCAGCTGC.........................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........TTGGAAGATTTTTATGCAGCTGCAAAT.....................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
......................TGCAGCTGCAAATAGAGCATACAATCAGAA....................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................AGCTGCAAATAGAGCATACAAT.........................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................ATGCAGCTGCAAATAGAGCATACA...........................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GCAGCTGCAAATAGAGCATACAAT.........................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TTCGTTGGAAGATTTTTATGCAG.............................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......CGTTGGAAGATTTTTATGCAGCTGC.........................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TTATGCAGCTGCAAATAGAGCATAC............................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TTCGTTGGAAGATTTTTATGC...............................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GAAGATTTTTATGCAGCTGCAAATAGAGC................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TTCGTTGGAAGATTTTTATGCAGCTG..........................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................GCAAATAGAGCATACAATCAGA.....................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TTTATGCAGCTGCAAATAGAGCAA..............................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...ATTCGTTGGAAGATTTTTAT.................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
......................TGCAGCTGCAAATAGAGCATACAATC........................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TATGCAGCTGCAAATAGAGC................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
........TTGGAAGATTTTTATGCAGC............................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
....TTCGTTGGAAGATTTTTATGCAGCTGCA........................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TTTTTATGCAGCTGCAAAT.....................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GCAGCTGCAAATAGAGCAT..............................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GCAGCTGCAAATAGAGCATAC............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...........................CTGCAAATAGAGCATACAATCAG......................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..............GATTTTTATGCAGCTGCAAATA....................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............ATTTTTATGCAGCTGCAAATAGAGCA...............................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................GCTGCAAATAGAGCATACAATCAGAAT...................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TGCAAATAGAGCATACAATC........................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
ACCATTCGTTGGAAGATTTTTATGCA..............................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............GATTTTTATGCAGCTGCA........................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.............................GCAAATAGAGCATACAATCA.......................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CAGCTGCAAATAGAGCATACAATCAGAA....................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................GCTGCAAATAGAGCATACAATCAGAA....................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........GGAAGATTTTTATGCAGCTGCAAATAGAGC................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GCAGCTGCAAATAGAGCATACA...........................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TATGCAGCTGCAAATAGAGCAT..............................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............GATTTTTATGCAGCTGCAAATAGAGCA...............................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TATGCAGCTGCAAATAGAGCA...............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TGCAGCTGCAAATAGAGCAT..............................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
......CGTTGGAAGATTTTTATGCAGCT...........................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
......................TGCAGCTGCAAATAGAGCATACAATCAG......................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............ATTTTTATGCAGCTGCAAATAGAGC................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
..........GGAAGATTTTTATGCAGC............................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................GCAAATAGAGCATACAATCAG......................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............ATTTTTATGCAGCTGCAAATAGAATC...............................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TTTATGCAGCTGCAAATAGAGCATACA...........................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............GATTTTTATGCAGCTGCAAATAGA..................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TTGGAAGATTTTTATGCAGCTGCAAA......................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TGCAGCTGCAAATAGAGC................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TTTATGCAGCTGCAAATAGAGCATA.............................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TTATGCAGCTGCAAATAGAGCAT..............................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.............................GCAAATAGAGCATACAATCAGAAT...................................................................................................................................................................................................................................................................................................................................................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.................................ATAGAGCATACAATCAGAAT...................................................................................................................................................................................................................................................................................................................................................................20140.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
ACCATTCGTTGGAAGATTTTTATGCAGCTGCAAATAGAGCATACAATCAGGTATGTT-CTCTATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head
M024
Male-body
M025
Embryo
M053
Female-body
O001
Testis
O002
Head
SRR553485
Ovary
SRR553486
Ovary
SRR553487
Ovary
SRR553488
Ovary
SRR618934
Ovary
V044
Embryo
SRR902008
Ovary
SRR902009
Testis
SRR1275487
Male larvae
SRR1275485
Male prepupae
SRR1275483
Male prepupae
............................TGCAAATAGAGCATACAATCAGAA....................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000000000
...ATTCGTTGGAAGATTTTTATGCAG.............................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000000001000
..........GGAAGATTTTTATGCAGCTG..........................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
.......................GCAGCTGCAAATAGAGCATACAATCAGA.....................................................................................................................................................................................................................................................................................................................................................................2811.00100010000000000000
.CCATTCGTTGGAAGATTTTTATGCAGC............................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
............................TGCAAATAGAGCATACAATCAGA.....................................................................................................................................................................................................................................................................................................................................................................2311.00100000001000000000
droSec2
ACCATTCGTTGGAAGATTTTTATGCAGCTGCAAATAGAGCATACAATCAGGTATGTT-CTCTATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body
V113
Male-body
V114
Embryo
V115
Head
.....................ATGCAGCTGCAAATAGAGC................................................................................................................................................................................................................................................................................................................................................................................19112.001200120
......................TGCAGCTGCAAATAGAGC................................................................................................................................................................................................................................................................................................................................................................................1813.0030030
................TTTTTATGCAGCTGCAAATAGAGC................................................................................................................................................................................................................................................................................................................................................................................2412.0020020
..............GATTTTTATGCAGCTGCAAATAGAGC................................................................................................................................................................................................................................................................................................................................................................................2612.0020020
....................TATGCAGCTGCAAATAGAGC................................................................................................................................................................................................................................................................................................................................................................................2012.0020020
...............ATTTTTATGCAGCTGCAAATAGAGC................................................................................................................................................................................................................................................................................................................................................................................2512.0020110
.................TTTTATGCAGCTGCAAATAGAGC................................................................................................................................................................................................................................................................................................................................................................................2312.0021100
..................TTTATGCAGCTGCAAATAGAGC................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
......................TGCAGCTGCAAATAGAGCATACA...........................................................................................................................................................................................................................................................................................................................................................................2311.0010100
...ATTCGTTGGAAGATTTTTA..................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
.......GTTGGAAGATTTTTATGC...............................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
................TTTTTATGCAGCTGCAAAT.....................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
........................CAGCTGCAAATAGAGCATA.............................................................................................................................................................................................................................................................................................................................................................................1911.0010010
...ATTCGTTGGAAGATTTTTATGC...............................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
.............................GCAAATAGAGCATACAAT.........................................................................................................................................................................................................................................................................................................................................................................1811.0010010
ACCATTCGTTGGAAGATTTTTATGC...............................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
.......GTTGGAAGATTTTTATGCAGC............................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
..................TTTATGCAGCTGCAAATAGAG.................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
.......................GCAGCTGCAAATAGAGCAT..............................................................................................................................................................................................................................................................................................................................................................................1911.0010010
.....................ATGCAGCTGCAAATAGAGCATACA...........................................................................................................................................................................................................................................................................................................................................................................2411.0010010
.....................ATGCAGCTGCAAATAGAGCAT..............................................................................................................................................................................................................................................................................................................................................................................2111.0010010
................................AATAGAGCATACAATCAGAAT...................................................................................................................................................................................................................................................................................................................................................................2130.3311000
.....................ATGCAGCTGCAAATAGAGT................................................................................................................................................................................................................................................................................................................................................................................1930.3310010
droYak3
AATAATATATATATATATAATATAT-----------------A--------------------------------------TAATA---TATAT---------------------------------------ATATATAATAATATATA---TATAT------ATAATATATATATATATAT----------------AATAATATATATATAAAATTATAT-------------------------------------------------------------------------------------------------------------------------------------------A-TATATAATCC---------------------------TATATATSizeHit CountTotal NormTotalM026
Head
M043
Female-body
M056
Embryo
V046
Embryo
V052
Head
V058
Head
V120
Male-body
SRR1275488
Male larvae
SRR1275486
Male prepupae
SRR1275484
Male prepupae
GSM1528802
follicle cells
No Reads
droEre2
ACCACTCTTTGGAAGATTTTTATGCAGCAGCAAATAGAGCATACAACCAGGTACGTCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body
M057
Embryo
V060
Head
V040
Embryo
V107
Male-body
V108
Head
GSM1528801
follicle cells
..................TTTATGCAGCAGCAAATAGAGC................................................................................................................................................................................................................................................................................................................................................................................2219.0090000810
.................TTTTATGCAGCAGCAAATAGAGC................................................................................................................................................................................................................................................................................................................................................................................2317.0070000610
....................TATGCAGCAGCAAATAGAGC................................................................................................................................................................................................................................................................................................................................................................................2016.0061000500
.....................ATGCAGCAGCAAATAGAGC................................................................................................................................................................................................................................................................................................................................................................................1916.0060000510
...............ATTTTTATGCAGCAGC.........................................................................................................................................................................................................................................................................................................................................................................................1613.0030000003
..........................GCAGCAAATAGAGCATACAACC........................................................................................................................................................................................................................................................................................................................................................................2212.0020000200
....CTCTTTGGAAGATTTTTATGCA..............................................................................................................................................................................................................................................................................................................................................................................................2212.0021000100
..................TTTATGCAGCAGCAAATAGAG.................................................................................................................................................................................................................................................................................................................................................................................2112.0020000200
................TTTTTATGCAGCAGCAAATAGAGC................................................................................................................................................................................................................................................................................................................................................................................2412.0020000200
.......................GCAGCAGCAAATAGAGCATACAACCAGA.....................................................................................................................................................................................................................................................................................................................................................................2812.0020000200
.............AGATTTTTATGCAGCAGCAAATAGAGC................................................................................................................................................................................................................................................................................................................................................................................2712.0021000100
......CTTTGGAAGATTTTTATGC...............................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
........TTGGAAGATTTTTATGCAGCAGC.........................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000
.....TCTTTGGAAGATTTTTATGC...............................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
...ACTCTTTGGAAGATTTTTA..................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
.............................GCAAATAGAGCATACAACC........................................................................................................................................................................................................................................................................................................................................................................1911.0010100000
....CTCTTTGGAAGATTTTTATGC...............................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
....................TATGCAGCAGCAAATAGAGCA...............................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
........TTGGAAGATTTTTATGCAGCAAAT........................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
ACCACTCTTTGGAAGATTTTTATGCAGC............................................................................................................................................................................................................................................................................................................................................................................................2811.0010000100
........TTGGAAGATTTTTATGCAGC............................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
.........................AGCAGCAAATAGAGCATACAACC........................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
.......................GCAGCAGCAAATAGAGCATACA...........................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
.....................ATGCAGCAGCAAATAGAGCAT..............................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
...................TTATGCAGCAGCAAATAGAGC................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
..................................TAGAGCATACAACCAGGTACGTCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2411.0011000000
......CTTTGGAAGATTTTTATGCAGC............................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000
...............................AAATAGAGCATACAACCAGA.....................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
.........................AGCAGCAAATAGAGCATACAACCAGA.....................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
....................TATGCAGCAGCAAATAGAG.................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
......................TGCAGCAGCAAATAGAGCATACAACCAG......................................................................................................................................................................................................................................................................................................................................................................2811.0010000010
..............GATTTTTATGCAGCAGCAAAT.....................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
......................TGCAGCAGCAAATAGAGC................................................................................................................................................................................................................................................................................................................................................................................1820.5010000010

Generated: 05/17/2015 at 04:51 AM