ID:

dvi_644

 Coordinate:

scaffold_10322:447111-447261 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-4.2 -3.8 -3.8

Flybase annnotation

exon [dvir_GLEANR_16525:5]; CDS [Dvir\GJ16098-cds]; intron [Dvir\GJ16098-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AGCAAGCATTTTAACTTTTTTATATGTAATGAGGATTAAAAATTTTTAAGAATTAAAATGGTTACTGGCAATAGTTTTAGCAAGCTTTTTAAAAGTTGAATTGTGTTCCTAAGCATATTCATCCAAAAGCCTAAACGCCAACAAAATATTTTAATAAGTGTCTAATAATACTTCATATATAAACTTTATTTTTATGTCTAGCATAAAGAATTCCTCTGCTACTCCACATACTGTAATGCTTATCCACGTGC
*******************************************************************************************************.........................((......)).................((((((......))))))...(((((((.......))))))).***************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060684
140x9_0-2h_embryos_total
 SRR060675
140x9_ovaries_total
 SRR060679
140x9_testes_total
 SRR060688
160_ovaries_total
 M027
male body		 M061
embryo
 SRR060654
160x9_ovaries_total
 SRR060689
160x9_testes_total
 SRR060658
140_ovaries_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060683
160_testes_total
 V116
male body		 SRR060663
160_0-2h_embryos_total
 M028
head
 V047
embryo
 SRR060687
9_0-2h_embryos_total
 SRR060677
Argx9_ovaries_total
 SRR060686
Argx9_0-2h_embryos_total
.......................................................................................................TGTTCCTAAGCATATTCATCCAAAAGCC........................................................................................................................ 28 0 1 504.00 504 463 1 0 4 20 0 0 7 5 0 1 1 0 1 0 1 0 0 0
..................................................................................................................................................................................................................TTCCTCTGCTACTCCACATACTGTAATGC............ 29 0 1 176.00 176 173 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................TAATGAGGATTAAAAATTTTTAAGAAT...................................................................................................................................................................................................... 27 0 1 79.00 79 45 4 2 7 0 5 15 0 0 0 0 0 0 0 1 0 0 0 0
............................................................................................................................................................................TCATATATAAACTTTATTTTTATGTC..................................................... 26 0 1 65.00 65 5 23 19 7 7 0 0 2 2 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TTCCTCTGCTACTCCACATACTGTAATG............. 28 0 1 58.00 58 25 1 1 1 0 29 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TTCCTCTGCTACTCCACATACTGTAA............... 26 0 1 43.00 43 32 7 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................GGTTACTGGCAATAGTTTTAGCAAGCT..................................................................................................................................................................... 27 0 1 39.00 39 10 16 5 6 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................GTTCCTAAGCATATTCATCCAAAAGCC........................................................................................................................ 27 0 1 38.00 38 38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TGTTCCTAAGCATATTCATCCAAAAGC......................................................................................................................... 27 0 1 35.00 35 34 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
......................TATGTAATGAGGATTAAAAATTTTT............................................................................................................................................................................................................ 25 0 1 33.00 33 0 12 11 8 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................GGTTACTGGCAATAGTTTTAGCAAGC...................................................................................................................................................................... 26 0 1 28.00 28 23 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TCCTCTGCTACTCCACATACTGTAATGC............ 28 0 1 27.00 27 27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TTCCTCTGCTACTCCACATACTGT................. 24 0 1 21.00 21 11 2 1 1 5 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................GGTTACTGGCAATAGTTTTAGCAAGCTT.................................................................................................................................................................... 28 0 1 16.00 16 6 3 2 3 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
......................TATGTAATGAGGATTAAAAATTTTTA........................................................................................................................................................................................................... 26 0 1 16.00 16 0 4 8 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TGTTCCTAAGCATATTCATCCAAAAGCCT....................................................................................................................... 29 0 1 15.00 15 14 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................TATGTAATGAGGATTAAAAATTTT............................................................................................................................................................................................................. 24 0 1 11.00 11 0 2 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TTCCTCTGCTACTCCACATACTGTAAT.............. 27 0 1 11.00 11 7 1 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................TCATATATAAACTTTATTTTTATGT...................................................... 25 0 1 10.00 10 5 3 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................TGGTTACTGGCAATAGTTTTAGCAAGC...................................................................................................................................................................... 27 0 1 10.00 10 9 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................ATGGTTACTGGCAATAGTTTTAGCA......................................................................................................................................................................... 25 0 1 10.00 10 6 1 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TTCCTCTGCTACTCCACATACTG.................. 23 0 1 10.00 10 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................TAAAGAATTCCTCTGCTACTCCACATAC.................... 28 0 1 8.00 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TTCCTCTGCTACTCCACATACTGTA................ 25 0 1 8.00 8 4 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................ATGGTTACTGGCAATAGTTTTAGCAAGC...................................................................................................................................................................... 28 0 1 7.00 7 5 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................TGTTCCTAAGCATATTCATCCA.............................................................................................................................. 22 0 1 7.00 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................TGGTTACTGGCAATAGTTTTAGCAAGCT..................................................................................................................................................................... 28 0 1 7.00 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................TAAACGCCAACAAAATATTTTAATAAGT............................................................................................ 28 0 1 6.00 6 0 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TCCTCTGCTACTCCACATACTGTAATGCT........... 29 0 1 6.00 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................AAATGGTTACTGGCAATAGTTTTAGCA......................................................................................................................................................................... 27 0 1 6.00 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................TAAAGAATTCCTCTGCTACTCCACA....................... 25 0 1 6.00 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................TGAATTGTGTTCCTAAGCATATTCA.................................................................................................................................. 25 0 1 6.00 6 0 2 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................TAATGAGGATTAAAAATTTTTAAGAA....................................................................................................................................................................................................... 26 0 1 6.00 6 5 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................TAATGAGGATTAAAAATTTTTAAGAATT..................................................................................................................................................................................................... 28 0 1 6.00 6 4 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0
...........................AATGAGGATTAAAAATTTTTAAGAAT...................................................................................................................................................................................................... 26 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................AAATGGTTACTGGCAATAGTTTTAG........................................................................................................................................................................... 25 0 1 5.00 5 2 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................AAATGGTTACTGGCAATAGTTTTAGC.......................................................................................................................................................................... 26 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTCCTAAGCATATTCATCCAAAAGCC........................................................................................................................ 26 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTACTGGCAATAGTTTTAGCAAGCTTT................................................................................................................................................................... 27 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................AAATGGTTACTGGCAATAGTTTTA............................................................................................................................................................................ 24 0 1 4.00 4 3 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................TGAATTGTGTTCCTAAGCATATTC................................................................................................................................... 24 0 1 4.00 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TCCTAAGCATATTCATCCAAAAGCC........................................................................................................................ 25 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TGTTCCTAAGCATATTCATCC............................................................................................................................... 21 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................AATGGTTACTGGCAATAGTTTTAGCA......................................................................................................................................................................... 26 0 1 4.00 4 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TGTTCCTAAGCATATTCATCCAAAAG.......................................................................................................................... 26 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TCCTCTGCTACTCCACATACTGTAA............... 25 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TAAGCATATTCATCCAAAAGCC........................................................................................................................ 22 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TTCCTCTGCTACTCCACATACT................... 22 0 1 3.00 3 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................TAATGAGGATTAAAAATTTTTAAGA........................................................................................................................................................................................................ 25 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................AAGCATATTCATCCAAAAGCC........................................................................................................................ 21 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................TGAGGATTAAAAATTTTTAAGAAT...................................................................................................................................................................................................... 24 0 1 3.00 3 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................ATGGTTACTGGCAATAGTTTTAGCAA........................................................................................................................................................................ 26 0 1 3.00 3 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................ATGTTCCTAAGCATATTCATCCAAAAGCC........................................................................................................................ 29 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................ATGGTTACTGGCAATAGTTTTAGCAAG....................................................................................................................................................................... 27 0 1 3.00 3 0 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................CTAAGCATATTCATCCAAAAGCC........................................................................................................................ 23 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................CCTCTGCTACTCCACATACTGTAATGC............ 27 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................TAAACGCCAACAAAATATTTTAATAAG............................................................................................. 27 0 1 3.00 3 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TGCTCCTAAGCATATTCATCCAAAAGCC........................................................................................................................ 28 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................TTAAAATGGTTACTGGCAATAGTTT.............................................................................................................................................................................. 25 0 1 3.00 3 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTACTGGCAATAGTTTTAGCAAGCT..................................................................................................................................................................... 25 0 1 2.00 2 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
........................TGTAATGAGGATTAAAAATT............................................................................................................................................................................................................... 20 0 1 2.00 2 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0
...........................AATGAGGATTAAAAATTTTTAAGAATT..................................................................................................................................................................................................... 27 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CATATATAAACTTTATTTTTATGT...................................................... 24 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................TATGTAATGAGGATTAAAAATTTTTAA.......................................................................................................................................................................................................... 27 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................TACTGGCAATAGTTTTAGCAAGCTTT................................................................................................................................................................... 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................AAATGGTTACTGGCAATAGTTTT............................................................................................................................................................................. 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TTCCTCTGCTACTCCACATAC.................... 21 0 1 2.00 2 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................TTGTTCCTAAGCATATTCATCCAAAAGCC........................................................................................................................ 29 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TCCTCTGCTACTCCACATACTG.................. 22 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TGTTCCTAAGCATATTCATCCAA............................................................................................................................. 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................ACTGGCAATAGTTTTAGCAAGCTTT................................................................................................................................................................... 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................CCTAAGCATATTCATCCAAAAGCC........................................................................................................................ 24 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTACTGGCAATAGTTTTAGCAAGCTT.................................................................................................................................................................... 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TGTTCCTAAGCATATTCATCCAAAATCC........................................................................................................................ 28 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................TAATGAGGATTAAAAATTTTTAAGAATC..................................................................................................................................................................................................... 28 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................CATATTCATCCAAAAGCC........................................................................................................................ 18 0 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................GTTCCTAAGCATATTCATCCAAAAGC......................................................................................................................... 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................TGATGAGGATTAAAAATTTTTAAGAAT...................................................................................................................................................................................................... 27 1 1 2.00 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TTCCTCTGCTACTCCACA....................... 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................TAAACGCCAACAAAATATTTTAATAAGTG........................................................................................... 29 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................AATGGTTACTGGCAATAGTTTTAGC.......................................................................................................................................................................... 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................TGAATTGTGTTCCTAAGCATATT.................................................................................................................................... 23 0 1 2.00 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................AGCATATTCATCCAAAAGCC........................................................................................................................ 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................TGGTTACTGGCAATAGTTTTAGCAAG....................................................................................................................................................................... 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................TTTAAAAGTTGAATTGTGTTCCT............................................................................................................................................. 23 0 1 2.00 2 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0
......................TATGTAATGAGGATTAAAAATTT.............................................................................................................................................................................................................. 23 0 1 2.00 2 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................CTGTTCCTAAGCATATTCATCCAAAAGCC........................................................................................................................ 29 1 1 2.00 2 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................TCATATATAAACTTTATTTTTATGTCT.................................................... 27 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................TGAATTGTGTTCCTAAGCATA...................................................................................................................................... 21 0 1 2.00 2 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................GTCTAGCATAAAGAATTCCTCTGCTAC............................. 27 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................TCATATATAAACTTTATTTTTATGTCC.................................................... 27 1 1 2.00 2 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TCCTCTGCTACTCCACATACTGTAATGCC........... 29 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................GGTTACTGGCAATAGTTTTAGCAAGT...................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................TAATGAGGATTAAAAATTTTTAAG......................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................ATGGTTACTAGCAATAGTTTTAGCAAG....................................................................................................................................................................... 27 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTCCTAAGCATATTCATCCAAAAGCCT....................................................................................................................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................TATGTAATGAGGATTAAAAATT............................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................AACTTTATTTTTATGTCTAGCAT............................................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TCTGCTACTCCACATACTGTAATGCTTA......... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................CGTTCCTAAGCATATTCATCCAAAAGC......................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TGTTCCTAAGCATATTCACCCAACAGCC........................................................................................................................ 28 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................TAATGAGGATTAAAAATTTTTCAGAAT...................................................................................................................................................................................................... 27 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TATTCCTAAGCATATTCATCCAAAAGCC........................................................................................................................ 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................TATATAAACTTTATTTTTATGTCTAGCA................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................GTGTTCCTAAGCATATTCATCCAAAAGCC........................................................................................................................ 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TGTTCCTAAGCATATTCATCCAAAGCC......................................................................................................................... 27 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................TAGCATAAAGAATTCCTCTG................................. 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................CAAATGGTTACTGGCAATAGTTTTAGC.......................................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................TAGCATAAAGAATTCCTCTGCTACT............................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................AAACGCCAACAAAATATTTTAATAAGTG........................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TGTTCCTAAGCATATTCATCCAAAACCC........................................................................................................................ 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................TTTTAAGAATTAAAATGGTTACTGGCA..................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TCCTCTGCTACTCCACATACTGTAAT.............. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................TGTAATGAGGATTAAAAATTTTTAAGA........................................................................................................................................................................................................ 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................TGGTTACTGGCAATAGTTTTAGCA......................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TCCTCTGCTACTCCACATACTGTAATGCG........... 29 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TAAAATGGTTACTGGCAATAGTTT.............................................................................................................................................................................. 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................TACTCCACATACTGTAATGC............ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................AAGCATATTCATCCAAAAGCCTAAACGC................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................GTTCCTAGGCATATTCATCCAGGAGCC........................................................................................................................ 27 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................AATGGTTACTGGCAATAGTTTTAGCAA........................................................................................................................................................................ 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TCCTCTGCTACTCCACATACTGT................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................CACATACTGTAATGCTTATCCACGTGC 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TTCCTCTGCTACTCCACATTCTGTAATGC............ 29 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................ATAGTTACTGGCAATAGTTTTAGCAAG....................................................................................................................................................................... 27 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................TAAACTTTATTTTTATGTC..................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TCCTCTGCTACTCCAGATACTGTAATGC............ 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................GTTGAATTGTCTTCCTAAGCATATTC................................................................................................................................... 26 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TCCACATACTGTAATGCTTATCCACGT.. 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TCCTCTGCTACTCCACATACTGTAGTGC............ 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................ATGAGGATTAAAAATTTTTAAGAATC..................................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TGTTCCTAAGCATATTCATCCAAACGCC........................................................................................................................ 28 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................TTATATGTAATGAGGATTAAAAAT................................................................................................................................................................................................................ 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TCTGCTACTCCACATACTGTAATG............. 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................TTAATGAGGATTAAAAATTTTTAAGAAT...................................................................................................................................................................................................... 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................GGTTACTGGCAATAGTTTTAGCAAG....................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TTCCTCTGCTGCTCCACATACTGTAATGC............ 29 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................GCATATTCATCCAAAAGCC........................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................AAAATGGTTACTGGCAATAGTTTTAGC.......................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................AGGATTAAAAATTTTTAAGAAT...................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................ATATATAAACTTTATTTTTATGTC..................................................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................AATACTTCATATATAAACTTTATT............................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TCTGCTACTCCACATACTGTAATGC............ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................TTAAAATGGTTACTGGCAATAGT................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TGTTCCTAAGCATATTCATCCACAAGCCT....................................................................................................................... 29 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................AAGCATATTCATCCAAAAGC......................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................GTTACTGGCAATAGTTTTAGCAAGC...................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................CTAAGCATATTCATCCAAAAGC......................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................ATGGTTACTGGCAATAGT................................................................................................................................................................................ 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................TCATATATAAAGTTTATTTTTATGTC..................................................... 26 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TGTTCCTAAGCATATTCATCCAAA............................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................GCTACTCCACATACTGTAATGCTTATC....... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TGTCTAGCATAAAGAATTCCTCTGC................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TAAAATGGTTACTGGCAATAGT................................................................................................................................................................................ 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................ATAAAGAATTCCTCTGCTACTCCACA....................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TATTCATCCAAAAGCCTAAACGCCAACA............................................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TGTTCCTAAGCATATACATCCAAAAGCC........................................................................................................................ 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................TAATGAGGATTAAAAATTTTTAAGAATA..................................................................................................................................................................................................... 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................TATGTAATGCGGATTAAAAATTTT............................................................................................................................................................................................................. 24 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................TAATGAGGATTAAAAATTTTTAAGAAC...................................................................................................................................................................................................... 27 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................AATGAGGATTAAAAATTTTTAAG......................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TAAAATGGTTACTGGCAATAGTTTTA............................................................................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TTCCTCTGCTACTCCACATA..................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TTCCTCTGCTACTCCACATACTC.................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................ATGGTTACTGGCCATAGTTTTAG........................................................................................................................................................................... 23 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................TGTAGTGAGGATTAAAAAT................................................................................................................................................................................................................ 19 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................TCATATATAAACCTTATTTTTATGT...................................................... 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................TAATGAGGATTAAAAATTTTTAAGAATTA.................................................................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TCCTCTGCTACTCCACATACTGTA................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................GTAATGAGGATTAAAAATTTTTAAGAAT...................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TCCTCTGCTACTCCACATACTGTAATG............. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................TAATACTTCATATATAAACTTTAT.............................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................GCAATAGTTTTAGCAAGCT..................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................TCATATATAAACTTTATTTTTAT........................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................TATGTAATGAGGATTAAAAATTTTTC........................................................................................................................................................................................................... 26 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................ATGGTTACGGGCAATAGTTTTAGCAAGC...................................................................................................................................................................... 28 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................AAGTTGAATTGTGTTCCTAAGCATAT..................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TCCTCTGCTACTCCACATACTGTAATC............. 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TTCCTCTGCTACTCCACATACTGTAAAA............. 28 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TCCTCTGCTACTCCACATACT................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................TACTGGCAATAGTTTTAGCAAGCTTTT.................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................GCTACTCCACATACTGTAATGCTTATCC...... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TTCCTCTGCTACTCCACATACTGC................. 24 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................AGAATTCCTCTGCTACTCCACATACTG.................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................CTCTGCTACTCCACATACTGTAAT.............. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TGTCCCTAAGCATATTCATCCAAA............................................................................................................................ 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................ATTCCTCTGCTACTCCACATACTGT................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TGCTTCTGCTACTCCACATACTGTAATGC............ 29 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TGTTCCTAAGCATATTCATCCAAAAGCA........................................................................................................................ 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................ACTCCACATACTGTAATGCTTA......... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TTCTTCTGCTACTCCACATACT................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TCCACATACTGTAATGCTTATCCACG... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................TGGTTACTGGCAATAGTTT.............................................................................................................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................AATTGTGTTCCTAAGCATATTCATCC............................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................TGTAATGAGGATTAAAAATTTTTA........................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TGTTCCTAAGCATATTCATCCAAT............................................................................................................................ 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TGTTCCTAAGCATATTCATC................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................CTCTGCTACTCCACATACTGTAATG............. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................GTTCCTAAGCATATTCATCCA.............................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TGTTCCTAAGCATATTCATCCAAAAGCCC....................................................................................................................... 29 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TTCCTCTGCTAATCCACATACTGTAATGC............ 29 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................TCATATATAAACTTTATATTTATGTC..................................................... 26 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................TAGCATAAAGAATTCCTCTGCTACTCCAC........................ 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................AAAATGGTTACTGGCAATAGTTTTA............................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................TTTAAAAGTTGAATTGTGTTCCTAAGCA........................................................................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................TTCATCCAAAAGCCTAAACGCCAACA............................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................TATGTAATGAGGATTAAAAAT................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................CTACTCCACATACTGTAATGC............ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................TGAATTGTGTTCCTAAGCAT....................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................GATATTCATCCAAAAGCC........................................................................................................................ 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................TACTTCATATATAAACTTTATTTT........................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................CATACTGTAATGCTTATCCACGTG. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TGTTCCTAAGCATATTCATCTAAAAGCC........................................................................................................................ 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CATATATAAACTTTATTTTTATGTC..................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TGTTCCTAAGCATATTCATCCAAAAGCCA....................................................................................................................... 29 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................TATGTAGTGAGGATTAAAAATTTTT............................................................................................................................................................................................................ 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................TAGTTTTAGCAAGCTTTTTAAAAGT........................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................AATGGTTACTGGCAATAGTTTTAG........................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................TAATGAGGATTAAAAATTTTTAAGAAA...................................................................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................ACTTCATATATAAACTTTATTTTTATA....................................................... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................GTTGAATTGTGTTCCTAAGCATATTC................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TATTCATCCAAAAGCCTAAACCCCAACA............................................................................................................ 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TGTTCCTAAGCATATTCATCCAAAA........................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TTCCTCTGCTACTCCACGTACTGT................. 24 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................TACTGGCAATAGTTTTAGCAAGC...................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................GGTTACTGGCAATAGTTTTAGCAA........................................................................................................................................................................ 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................AATGAGGATTAAAAATTTTTAAGAA....................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................TAAACGCCAACAAAATATTTTAATAA.............................................................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................TGTAATGAGGATTAAAAATTTTTAAG......................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...............................................................................................................AGCATATTCATCCAAAAGCCTAAACG.................................................................................................................. 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................TAAAGAACTCCTCTGCTACTCCAC........................ 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................CTTCATATATAAACTTTATTTTTATG....................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................TAATGAGGATTAAAAATTTTTAAGAATTC.................................................................................................................................................................................................... 29 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................TACTTCATATATAAACTTTATTTTT.......................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................TGTAATGAGGATTAAAAATTTTT............................................................................................................................................................................................................ 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................GAATTCCTCTGCTACTCCACATACTG.................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................GCATATTCATCCAAAAGCCTAAACGCC................................................................................................................ 27 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TTCCTCTGCTACCCCACATACTGTAATG............. 28 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................TAAAGAATTCCTCTGCTACTCCAC........................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TGTTCCTAAGCATATTCATCCAACAGCC........................................................................................................................ 28 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................GGCAATAGTTTTAGCAAGCT..................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TTCCTCTGCTACTCCACATACTGTAAACC............ 29 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TGTTCCTAAGCATACTCATCCAAAAGCC........................................................................................................................ 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................TACGTAATGAGGATTAAAAATTTTTC........................................................................................................................................................................................................... 26 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................TTTTATATGTAATGAGGATTAAAAATT............................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................GTAATGAGATTTAAAAATTTT............................................................................................................................................................................................................. 21 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
........................TGTAATGGGGATTAAAAAA................................................................................................................................................................................................................ 19 2 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................GTAATGAGATTTAAAAATTTTAA........................................................................................................................................................................................................... 23 3 9 0.11 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................TGTGATGAGGATAAAAAA................................................................................................................................................................................................................. 18 2 18 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
...........................................TTTTAAGAACGAAAATGGGT............................................................................................................................................................................................ 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
......................................AAATTTTTGAAGAATTAAAA................................................................................................................................................................................................. 20 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

TCGTTCGTAAAATTGAAAAAATATACATTACTCCTAATTTTTAAAAATTCTTAATTTTACCAATGACCGTTATCAAAATCGTTCGAAAAATTTTCAACTTAACACAAGGATTCGTATAAGTAGGTTTTCGGATTTGCGGTTGTTTTATAAAATTATTCACAGATTATTATGAAGTATATATTTGAAATAAAAATACAGATCGTATTTCTTAAGGAGACGATGAGGTGTATGACATTACGAATAGGTGCACG
*****************************************************.........................((......)).................((((((......))))))...(((((((.......))))))).******************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060675
140x9_ovaries_total
 SRR060688
160_ovaries_total
 SRR060654
160x9_ovaries_total
 SRR060658
140_ovaries_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060679
140x9_testes_total
 M027
male body		 SRR060655
9x160_testes_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060683
160_testes_total
 SRR060674
9x140_ovaries_total
 M061
embryo
 V053
head
 SRR060656
9x160_ovaries_total
 SRR060669
160x9_females_carcasses_total
 SRR060678
9x140_testes_total
 SRR060680
 9xArg_testes_total
 SRR060682
9x140_0-2h_embryos_total
 V116
male body		 SRR060686
Argx9_0-2h_embryos_total
 SRR060660
Argentina_ovaries_total
 SRR060687
9_0-2h_embryos_total
.....................................................................................AAAAATTTTCAACTTAACACAAGGATTC.......................................................................................................................................... 28 0 1 27.00 27 25 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................TCACAGATTATTATGAAGTATATATT..................................................................... 26 0 1 24.00 24 18 2 1 0 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................GATCGTATTTCTTAAGGAGACGA............................... 23 0 1 20.00 20 5 6 6 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................AAAATTTTCAACTTAACACAAGGATTC.......................................................................................................................................... 27 0 1 20.00 20 14 0 4 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................ACAGATTATTATGAAGTATATATT..................................................................... 24 0 1 12.00 12 7 3 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................CGTTCGAAAAATTTTCAACTTAACACA................................................................................................................................................. 27 0 1 8.00 8 0 7 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................TTCACAGATTATTATGAAGTATATATT..................................................................... 27 0 1 8.00 8 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................ACAGATCGTATTTCTTAAGGAGACGA............................... 26 0 1 8.00 8 6 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........AAAATTGAAAAAATATACATTACTCCTA....................................................................................................................................................................................................................... 28 0 1 7.00 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TTTTCAACTTAACACAAGGATTC.......................................................................................................................................... 23 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................TATTCACAGATTATTATGAAGTATATATT..................................................................... 29 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................ATTTTCAACTTAACACAAGGATTC.......................................................................................................................................... 24 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................TCACAGATTATTATGAAGTATATAT...................................................................... 25 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....TCGTAAAATTGAAAAAATATACATTACT........................................................................................................................................................................................................................... 28 0 1 4.00 4 0 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................CACAGATTATTATGAAGTATATATT..................................................................... 25 0 1 4.00 4 3 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................AAAAATTTTCAACTTAACACAAGGATT........................................................................................................................................... 27 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................GAAAAATTTTCAACTTAACACAAGGATTC.......................................................................................................................................... 29 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................AAATTTTCAACTTAACACAAGGATTC.......................................................................................................................................... 26 0 1 4.00 4 3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................AGATCGTATTTCTTAAGGAGACGA............................... 24 0 1 4.00 4 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................................AATTTTCAACTTAACACAAGGATTC.......................................................................................................................................... 25 0 1 4.00 4 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............TGAAAAAATATACATTACTCC......................................................................................................................................................................................................................... 21 0 1 3.00 3 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................ATTCACAGATTATTATGAAGTATATATT..................................................................... 28 0 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............TTGAAAAAATATACATTACTCCTA....................................................................................................................................................................................................................... 24 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................GTAGGTTTTCGGATTTGCGGTT.............................................................................................................. 22 0 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................TTTCAACTTAACACAAGGATTC.......................................................................................................................................... 22 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................AGTAGGTTTTCGGATTTGCGGTT.............................................................................................................. 23 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................ATAAGTAGGTTTTCGGATTTGCGGTT.............................................................................................................. 26 0 1 3.00 3 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................GGTTTTCGGATTTGCGGTTGTTTT......................................................................................................... 24 0 1 3.00 3 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................TCGAAAAATTTTCAACTTAACACA................................................................................................................................................. 24 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........AATTGAAAAAATATACATTACTCCTA....................................................................................................................................................................................................................... 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TCAACTTAACACAAGGATTC.......................................................................................................................................... 20 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................GTATTTCTTAAGGAGACGA............................... 19 0 1 2.00 2 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ATTTCTTAAGGAGACGATGAGGTG........................ 24 0 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................CTTAATTTTACCAATGACCGTTATC................................................................................................................................................................................. 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................CCAATGACCGTTATCAAAATCGTTC....................................................................................................................................................................... 25 0 1 2.00 2 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................TCGTTCGAAAAATTTTCAACTTAACACA................................................................................................................................................. 28 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................ACAGATCGTATTTCTTAAGGAGACGAT.............................. 27 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................GGTTTTCGGATTTGCGGTT.............................................................................................................. 19 0 1 2.00 2 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................AAATTTTCAACTTAACACAAGGATT........................................................................................................................................... 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............TGAAAAAATATACATTACTCCTA....................................................................................................................................................................................................................... 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........AAATTGAAAAAATATACATTACTCCT........................................................................................................................................................................................................................ 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................TCACAGATTATTATGAAGTA........................................................................... 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CAACTTAACACAAGGATTCGTATAA.................................................................................................................................... 25 0 1 2.00 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................CCCAAATTTTCAACTTAACACAAGGATTC.......................................................................................................................................... 29 3 1 2.00 2 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................GGATTTGCGGTTGTTTTATAAAAT.................................................................................................. 24 0 1 2.00 2 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........ATTGAAAAAATATACATTACTCCTA....................................................................................................................................................................................................................... 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GACGATGAGGTGTATGACATT............... 21 0 1 2.00 2 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................GTAGGTTTTCGGATTTGCGGTTGTTT.......................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................TTTCTTAAGGAGACGATGAGGTGT....................... 24 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................GATCGTACTTCTTAAGGAGACGA............................... 23 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................CCTATTCACAGATTATTATGAAGTATA......................................................................... 27 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................AGACGATGAGGTGTATGACATT............... 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................CTAAATTTTCAACTTAACACAGGGATTC.......................................................................................................................................... 28 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................ACAGATCGTATTTCTTAAGGAGACG................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................GTTTTCAACTTAACACAAGGATTC.......................................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................ACTTAACACAAGGATTCGTATAAG................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................AGATCGTATTTCTCAAGGAGACGA............................... 24 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................CGGATTTGCGGTTGTTTTAT....................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
................................................................................................................................................................................................................TTAAGGAGACGATGAGGTGTATGACATT............... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................CCAATGACCGTTATCAAAATCGTT........................................................................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................CAAAAATTTTCAACTTAACACAAGGATTC.......................................................................................................................................... 29 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................CGATGAGGTGTATGACATTACGAAT......... 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................TTATCAAAATCGTTCGAAAAATTTT............................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................GTATAAGTAGGTTTTCGGAT...................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................TTCCAAAAATTTTCAACTTAACACA................................................................................................................................................. 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......AAAAATTGAAAAAATATACATTACTCCTA....................................................................................................................................................................................................................... 29 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................AGGAGACGATGAGGTGTATG.................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TTCTTAAGGAGACGATGAGGTGTA...................... 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................AAGGAGACGATGAGGTGTATGACATT............... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................GTATAAGTAGGTTTTCGGATTT.................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................CCCTTTTCAACTTAACACAAGGATTC.......................................................................................................................................... 26 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................AAGACCGTTATCAAAATCG.......................................................................................................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................ATACATTACTCCTAATTTTTAAAAAT........................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................ACTTTTCAACTTAACACAAGGATTC.......................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........AAAATTGAAAAAATATACATTACTCCT........................................................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................GGTTTTCGGATTTGCGGTTGT............................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................AAAAATTCTTAATTTTACCAATGACCG...................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................CAGATTATTATGAAGTATATATT..................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................GATCGTATTTCTTAAGGAGA.................................. 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................AAAAATTTTCAACTTAAGACAAGGATTC.......................................................................................................................................... 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................TAACACAAGGATTCGTATAAGTAAGT.............................................................................................................................. 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................CCTATTTTCAACTTAACACAAGGATTC.......................................................................................................................................... 27 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................ATACAGATCGTATTTCTTAAGGAGACGA............................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................ACCAATGACCGTTATCAAAATCG.......................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TCAGATCGTATTTCTTAAGGAGACG................................ 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................TTTCAACTTAACACAAGGATT........................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................AATTCTTAATTTTACCAATGACCGTT.................................................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................ATTCTTAATTTTACCAATG.......................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................CGATAAGGAGTCTGACATTAC............. 21 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................ACAGATTATTATGAAGTATA......................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................TCACAGATTATTATGAAGTATA......................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........AAATTGAAAAAATATACATTACTCCTA....................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................CGTATAAGTAGGTTTTCGGATTTGCGG................................................................................................................ 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................TAGGTTTTCGGATTTGCGGTTGTTTT......................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................ACGTAGGTTTTCGGATTTGCGGTT.............................................................................................................. 24 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................ATCACAGATTATTATGAAGTATATATT..................................................................... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................ATATTTTCAACTTAACACAAGGATT........................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................GCGGTTGTTTTATAAAATTATT.............................................................................................. 22 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................TAGGTTTTCGGATTTGCGGTT.............................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CCTCTTAAGGAGACGATGAGGTGTA...................... 25 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................CTATTTTCAACTTAACACAAGGATTC.......................................................................................................................................... 26 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................CACAGATTATTATGAAGTATATAT...................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........ATTGAAAAAATATACGTTACTCCTA....................................................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TAAGGAGACGATGAGGTGTATGACATT............... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................TCGTATTTCTTAAGGAGACGA............................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................CGTATAAGTAGGTTTTCGGAT...................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TTTACCAATGACCGTTATC................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................TTATGAAGTATATATTTGAAATAAAA........................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................TAGTAGGTTTTCGGATTTGCGGTT.............................................................................................................. 24 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................AAAATTTTCAACTTAACACAAGGATTCG......................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................AAGTAGGTTTTCGGATTTGCGGTT.............................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................CCAAATTCTTAATTTTACCAATG.......................................................................................................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................TTCGAAAAATTTTCAACTTAACACA................................................................................................................................................. 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................CAAAATTTTCAACTTAACACAAGGATTC.......................................................................................................................................... 28 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................GTTTTTCGGATTTGCGGTTGTTTTA........................................................................................................ 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................CAAGGATTCGTATAAGTAGGTTTT........................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TACAGATCGTATTTCTTAAGGAGA.................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................CGGATTTGCGGTTGTTTTATAAAAT.................................................................................................. 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................GATTATTATGAAGTATATATT..................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................ACAGATCGTATTTCTTAAGGAGA.................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TACCAATGACCGTTATCAAAATCGTTC....................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........AAATTGAAAAAATATACATTACTCC......................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................TCGTATTTCTTAAGGAGACGATGAG........................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................AATTAAGTAGGTTTTCGGATTTGCGGTT.............................................................................................................. 28 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................CCAGATTATTATGAAGTATATATT..................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................AGGATTCGTATAAGTAGGTTTT........................................................................................................................... 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................AAAAATTTTCAACGTAACACAAGGATTC.......................................................................................................................................... 28 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TTTTTAAAAATTCTTAATTTTACCAATG.......................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................TCACAGATTATTATGAAGTATAT........................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................CAGATCGTATTTCTTAAGGAGACGAT.............................. 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............TGAAAAAATATACATTACTCCT........................................................................................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................CGTTCGAAAAATTTTCAACTTAACAC.................................................................................................................................................. 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................CCCAATTTTCAACTTAACACAAGGATTC.......................................................................................................................................... 28 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TAAGGAGACGATGAGGTGTATGACAT................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TTAAGTAGGTTTTCGGATTTGCGGTT.............................................................................................................. 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................ATTCTTAATTTTACCAATGACCGTTA................................................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................AACACAAGGATTCGTATAAGTAGG............................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................TATTCACAGATTATTATGAAGTAT.......................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GACGATGAGGTGTATGACAT................ 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................AACAGATTATTATGAAGTATATATT..................................................................... 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............GAAAAAATATACATTACTCCTA....................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................AAAATTATTCACAGATTATTATGAAG............................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................TCGGATTTGCGGTTGTTTTATAAAATT................................................................................................. 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......GTAAAATTGAAAAAATATACATTACTCCT........................................................................................................................................................................................................................ 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................GTCACAGATTATTATGAAGTATATATT..................................................................... 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................GGTTTTCGGATTTGCGGTTGTTTTAT....................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................AAAAATTTTCAACTTAACACAAGGATTCA......................................................................................................................................... 29 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................TGAAATAAAAATACAGATCG................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....CGTAAAATTGAAAAAATATAC................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................CCTAGGTTTTCGGATTTGCGGTTGTTTT......................................................................................................... 28 2 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................TTCACAGATTATTATGAAGTATATAT...................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................GTATAAGTAGGTTTTCGGATTTGCGGTT.............................................................................................................. 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................TAAAAATTCTTAATTTTACCAATG.......................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................AAAAAATTTTCAACTTAACACAAGGATTC.......................................................................................................................................... 29 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................TAATTTTACCAATGACCGTTATCAAAAT............................................................................................................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................ACGGATTATTATGAAGTATATATT..................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................AGATCGTATTTCTTAAGGAGACGATGAG........................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....CGTAAAATTGAAAAAATATACATTACTC.......................................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................CTATTATGAAGTATATATT..................................................................... 19 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................GATACGTTGAGGTGTAGGA................... 19 3 20 0.50 10 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 3 3 2 0 1
......................................................................................................................................TGCGGTTATTTTATAAAA................................................................................................... 18 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................GGAGCTGATGAGGTGTATC.................... 19 3 13 0.08 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................ATTTGCGGTTGGTTTAAAA..................................................................................................... 19 2 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................TGCGGTAGTTTTATAAAAT.................................................................................................. 19 1 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
......................................................................................................CACAAGGTTTCGAAAAAGTA................................................................................................................................. 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_10322:447061-447311 + dvi_644 AGCAAGCATTTTAACTTTTTTATATGTAATGAGGATTAAAAATTTTTAAGAA-----TTAAAATGGTTACTGGCAATAGTTTTAGCAAGCTTTTTAAAAGTTGAATTGTGTTCCTAAGCATATTCATCCAAAAGCCTAAACGCCAACAAAATATTTTAATAAGTGTCTAATAATAC-----------------------------------------------------------------------TTCATATATAAA------CTTTAT------TTTT---------ATGTCTAGCATAAAGAATTCCTCTGCTACTCCACATACTGTAATGCTTATCCACGTGC
droMoj3 scaffold_6540:7194145-7194237 + AAAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-----------------------------------------------------------------------TGTA---------------ATTATGTCAAAAAGTGAATTTTATACAACCAGCATAAAGGATTCCTATGTTATTCCACGTATTGTAATGCCTACACACGAGC
droGri2 scaffold_15110:88991-89178 - AGTT-------------------------------------------T----------------------------------CAGCAAGTGTTTTTGGAG--GAACTGCGA--CAAGGCAT---------------------------------------------C-------------GAACAAAATCAAATATCAAAGGTCTTTTTAAAAATGGTGGGTTTGCTCTATCAAATAATCGATACTCTTCATCACTGAC------TTTAAT------TCT---------TACACCTAGTATAAAGGATTTCTTTGCTACTCCACGTACTGTAATGCTTATCCACGTGC
droWil2 scf2_1100000004511:11326408-11326485 - ATAT-------------------------------------------CAA-------A--------------------------------------------------------------------------------------------------------------------AT-----------------------------------------------------------------------TTCA-------------T-A----------ATTT---------GATTCTAGCATAAAGGGTTTCTTTGCTACTCCACTTATTGTAATGCCTACCCGCGCGC
dp5 XR_group8:1315469-1315520 - --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCACAAGGGATTCCTGTGCTACTCCAACTACTGCAACGCCTATCCCCGGGC
droPer2 scaffold_32:156344-156395 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCACAAGGGATTCCTGTGCTACTCCAACTACTGCAACGCCTATCCCCGGGC
droAna3 scaffold_13337:2265807-2265858 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCACAAAGGTTTCCTTTGCTATTCCACCTACTGCAACGCCTATCCTCGTGC
droBip1 scf7180000396390:114576-114649 + ACTTTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----------------------------------------------------------------------TTT---------------CTACCA-------------------TTCTCTAGCACAAAGGCTTCCTATGCTACTCCACCTACTGCAATGCCTATCCTCGCGC
droKik1 scf7180000302510:857573-857656 + TCAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAT------------------------------------------------------------------------AAAACTTAC-TATCT------TTCA---------CCCGCCAGCACAAAGGTTTCCTCTGCTATTCCACTTATTGCAACGCCTATCCCCGGGC
droFic1 scf7180000454105:121224-121303 + ATAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-----------------------------------------------------------------------TTCA---------------TATAT------TTTT-------GTGTACTTAGCACAAGGGTTTTTTATGCTACTCAACCTACTGCAACGCCTATCCCCGAGC
droEle1 scf7180000491249:85641-85711 + AAAT-------------------------------------------TT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAA------TCG---------TTTCTTAAGCACAAAGGATTTCTATGCTACTCCAACTACTGCAACGCTTATCCCCGAGC
droRho1 scf7180000777885:39248-39368 - AAAATG-------------------GTAATGAGAGTTGGATTTTCTTTAATA-----TAAAAGCC------------------------------------------------G--------------------------------------------------------------TTTTA------------------------------------------------------------------------CATGTG------CTATCA------TTTT---------TTTTTCAGCATAAAGGATTTCTATGCTACTCAAGCTACTGCAACGCATATCCCCGAGC
droBia1 scf7180000300910:39374-39468 - ATTT-------------------------------------------TAATAATTGGTT------------------------------------------------GCCTTCT--------------------------------------------------------------T---TAAT------------------------------------------------------------------------AAATCATAC-------------------------AATTGCAGCACAAAGGTTTCCTCTGCTACTCCACTTACTGCAACGCTTATCCTAGAGC
droTak1 scf7180000415208:4350-4458 - AGAAGA----------------------------CTTTGATTT----AAATACTTAGTAAAAACC------------------------------------------------T--------------------------------------------------------------TTACA------------------------------------------------------------------------CATAAA------TTATAA-------------------TTTTTCAGCACAAAGGTTTTCTATGCTACTCCACCTACTGCAACGCCTATCCTCGAGC
droEug1 scf7180000409184:35826-35911 - TGAT-----------------------------------------------AATCAGT--------------------------------------------------------------------------------------------------------------------TTT---GAAT------------------------------------------------------------------------AAATTGTAC-T-----------------------TTCTGCAGCACAAAGGGTTTCTATGCTATTCCACATACTGCAACGCATATCCCCGAGC
dm3 chr3L:302583-302634 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCACAAAGGTTTCCTTTGCTACTCCACCTATTGTAACGCATACCCTCGAGC
droSim2 3l:273096-273147 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCATAAAGGTTTCCTATGCTACTCCACCTATTGTAACGCATACCCTCGAGC
droSec2 scaffold_2:334215-334266 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCATAAAGGTTTCCTATGCTACTCCACCTATTGTAACGCATACCCTCGAGC
droYak3 3L:281768-281819 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCACAAAGGTTTCCTATGCTACTCCACCTACTGCAACGCATACCCTCGAGC
droEre2 scaffold_4784:294983-295034 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCACAAAGGTTTCCTATGCTACTCCACCTATTGCAACGCATACCCTCGAGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
AGCAAGCATTTTAACTTTTTTATATGTAATGAGGATTAAAAATTTTTAAGAA-----TTAAAATGGTTACTGGCAATAGTTTTAGCAAGCTTTTTAAAAGTTGAATTGTGTTCCTAAGCATATTCATCCAAAAGCCTAAACGCCAACAAAATATTTTAATAAGTGTCTAATAATAC-----------------------------------------------------------------------TTCATATATAAA------CTTTAT------TTTT---------ATGTCTAGCATAAAGAATTCCTCTGCTACTCCACATACTGTAATGCTTATCCACGTGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................................................TGTTCCTAAGCATATTCATCCAAAAGCC....................................................................................................................................................................................................................281504.00504004630700000010100000000000000040001100020500000000000000000001000
...................................................................................................................................................................................................................................................................................................................TTCCTCTGCTACTCCACATACTGTAATGC............291176.0017600173000000000000000000000000000000010002000000000000000000000000
..........................TAATGAGGATTAAAAATTTTTAAGAA-----T..................................................................................................................................................................................................................................................................................................27179.007951451500000000000000000000020007000040000000000000000000000000000
........................................................................................................................................................................................................................................................TCATATATAAA------CTTTAT------TTTT---------ATGTC.....................................................26165.006500502000000000000000000001900070000230007200000000000000000000000
...................................................................................................................................................................................................................................................................................................................TTCCTCTGCTACTCCACATACTGTAATG.............28158.005829025100000000000000000000010001000010000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................TTCCTCTGCTACTCCACATACTGTAA...............26143.00430032000000000000000000000010002000070001000000000000000000000000
................................................................GGTTACTGGCAATAGTTTTAGCAAGCT.................................................................................................................................................................................................................................................................27139.003900100200000000000000000000500060000160000000000000000000000000000
.............................................................................................................GTTCCTAAGCATATTCATCCAAAAGCC....................................................................................................................................................................................................................27138.00380038000000000000000000000000000000000000000000000000000000000000
............................................................................................................TGTTCCTAAGCATATTCATCCAAAAGC.....................................................................................................................................................................................................................27135.00350034000000001000000000000000000000000000000000000000000000000000
......................TATGTAATGAGGATTAAAAATTTTT.............................................................................................................................................................................................................................................................................................................25133.003300000000100000000000000001100080000120001000000000000000000000000
................................................................GGTTACTGGCAATAGTTTTAGCAAGC..................................................................................................................................................................................................................................................................26128.00280023000000000000000000000010000000040000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TCCTCTGCTACTCCACATACTGTAATGC............28127.00270027000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................TTCCTCTGCTACTCCACATACTGT.................24121.00210011000001000000000000000010001000020005000000000000000000000000
................................................................GGTTACTGGCAATAGTTTTAGCAAGCTT................................................................................................................................................................................................................................................................28116.0016006000000000000000000000020003000030001000000000000000000000010
......................TATGTAATGAGGATTAAAAATTTTTA............................................................................................................................................................................................................................................................................................................26116.0016000000000000000000000000080004000040000000000000000000000000000
............................................................................................................TGTTCCTAAGCATATTCATCCAAAAGCCT...................................................................................................................................................................................................................29115.00150014010000000000000000000000000000000000000000000000000000000000
......................TATGTAATGAGGATTAAAAATTTT..............................................................................................................................................................................................................................................................................................................24111.0011000000000000000000000000070002000020000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................TTCCTCTGCTACTCCACATACTGTAAT..............27111.0011107000000000000000000000020000000010000000000000000000000000000
........................................................................................................................................................................................................................................................TCATATATAAA------CTTTAT------TTTT---------ATGT......................................................25110.0010005010000000000000000000000000000030001000000000000000000000000
...............................................................TGGTTACTGGCAATAGTTTTAGCAAGC..................................................................................................................................................................................................................................................................27110.0010009000000000000000000000000001000000000000000000000000000000000
..............................................................ATGGTTACTGGCAATAGTTTTAGCA.....................................................................................................................................................................................................................................................................25110.0010006000000000000000000000000001000010002000000000000000000000000
...................................................................................................................................................................................................................................................................................................................TTCCTCTGCTACTCCACATACTG..................23110.00100010000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................TAAAGAATTCCTCTGCTACTCCACATAC....................2818.008008000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................TTCCTCTGCTACTCCACATACTGTA................2518.008204000000000000000000000000000000020000000000000000000000000000
..............................................................ATGGTTACTGGCAATAGTTTTAGCAAGC..................................................................................................................................................................................................................................................................2817.007005000000001000000000000000000000000001000000000000000000000000
............................................................................................................TGTTCCTAAGCATATTCATCCA..........................................................................................................................................................................................................................2217.007007000000000000000000000000000000000000000000000000000000000000
...............................................................TGGTTACTGGCAATAGTTTTAGCAAGCT.................................................................................................................................................................................................................................................................2817.007007000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................TAAACGCCAACAAAATATTTTAATAAGT........................................................................................................................................................................................2816.006000000000000000000000000010001000040000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TCCTCTGCTACTCCACATACTGTAATGCT...........2916.006006000000000000000000000000000000000000000000000000000000000000
............................................................AAATGGTTACTGGCAATAGTTTTAGCA.....................................................................................................................................................................................................................................................................2716.006006000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................TAAAGAATTCCTCTGCTACTCCACA.......................2516.006006000000000000000000000000000000000000000000000000000000000000
.....................................................................................................TGAATTGTGTTCCTAAGCATATTCA..............................................................................................................................................................................................................................2516.006000000000000000000000000020002000020000000000000000000000000000
..........................TAATGAGGATTAAAAATTTTTAAGAA-----...................................................................................................................................................................................................................................................................................................2616.006005000000000000000000000010000000000000000000000000000000000000
..........................TAATGAGGATTAAAAATTTTTAAGAA-----TT.................................................................................................................................................................................................................................................................................................2816.006004200000000000000000000000000000000000000000000000000000000000
...........................AATGAGGATTAAAAATTTTTAAGAA-----T..................................................................................................................................................................................................................................................................................................2615.005005000000000000000000000000000000000000000000000000000000000000
............................................................AAATGGTTACTGGCAATAGTTTTAG.......................................................................................................................................................................................................................................................................2515.005002000000000000000000000000001000000002000000000000000000000000
............................................................AAATGGTTACTGGCAATAGTTTTAGC......................................................................................................................................................................................................................................................................2615.005005000000000000000000000000000000000000000000000000000000000000
..............................................................................................................TTCCTAAGCATATTCATCCAAAAGCC....................................................................................................................................................................................................................2615.005005000000000000000000000000000000000000000000000000000000000000
..................................................................TTACTGGCAATAGTTTTAGCAAGCTTT...............................................................................................................................................................................................................................................................2715.005005000000000000000000000000000000000000000000000000000000000000
............................................................AAATGGTTACTGGCAATAGTTTTA........................................................................................................................................................................................................................................................................2414.004003000000000000000000000000000000000000100000000000000000000000
.....................................................................................................TGAATTGTGTTCCTAAGCATATTC...............................................................................................................................................................................................................................2414.004000000000000000000000000000004000000000000000000000000000000000
...............................................................................................................TCCTAAGCATATTCATCCAAAAGCC....................................................................................................................................................................................................................2514.004004000000000000000000000000000000000000000000000000000000000000
............................................................................................................TGTTCCTAAGCATATTCATCC...........................................................................................................................................................................................................................2114.004004000000000000000000000000000000000000000000000000000000000000
.............................................................AATGGTTACTGGCAATAGTTTTAGCA.....................................................................................................................................................................................................................................................................2614.004002000000000000000000000010001000000000000000000000000000000000
............................................................................................................TGTTCCTAAGCATATTCATCCAAAAG......................................................................................................................................................................................................................2614.004004000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TCCTCTGCTACTCCACATACTGTAA...............2514.004004000000000000000000000000000000000000000000000000000000000000
..................................................................................................................TAAGCATATTCATCCAAAAGCC....................................................................................................................................................................................................................2213.003003000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................TTCCTCTGCTACTCCACATACT...................2213.003002000000000000000000000010000000000000000000000000000000000000
..........................TAATGAGGATTAAAAATTTTTAAGA.........................................................................................................................................................................................................................................................................................................2513.003003000000000000000000000000000000000000000000000000000000000000
...................................................................................................................AAGCATATTCATCCAAAAGCC....................................................................................................................................................................................................................2113.003003000000000000000000000000000000000000000000000000000000000000
.............................TGAGGATTAAAAATTTTTAAGAA-----T..................................................................................................................................................................................................................................................................................................2413.003000000000000000000000000000001000020000000000000000000000000000
..............................................................ATGGTTACTGGCAATAGTTTTAGCAA....................................................................................................................................................................................................................................................................2613.003000000000000000000000000000000000010002000000000000000000000000
..............................................................ATGGTTACTGGCAATAGTTTTAGCAAG...................................................................................................................................................................................................................................................................2713.003000010000000000000000000000001000010000000000000000000000000000
.................................................................................................................CTAAGCATATTCATCCAAAAGCC....................................................................................................................................................................................................................2313.003003000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................CCTCTGCTACTCCACATACTGTAATGC............2713.003003000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................TAAACGCCAACAAAATATTTTAATAAG.........................................................................................................................................................................................2713.003001000000000000000000000000001000010000000000000000000000000000
.........................................................TTAAAATGGTTACTGGCAATAGTTT..........................................................................................................................................................................................................................................................................2513.003000010000000000000000000000001000000001000000000000000000000000
..................................................................TTACTGGCAATAGTTTTAGCAAGCT.................................................................................................................................................................................................................................................................2512.002001000000000000000000000000000000100000000000000000000000000000
........................TGTAATGAGGATTAAAAATT................................................................................................................................................................................................................................................................................................................2012.002000010000000000000000000000000000100000000000000000000000000000
...........................AATGAGGATTAAAAATTTTTAAGAA-----TT.................................................................................................................................................................................................................................................................................................2712.002002000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................CATATATAAA------CTTTAT------TTTT---------ATGT......................................................2412.002002000000000000000000000000000000000000000000000000000000000000
......................TATGTAATGAGGATTAAAAATTTTTAA...........................................................................................................................................................................................................................................................................................................2712.002000000000000000000000000000002000000000000000000000000000000000
...................................................................TACTGGCAATAGTTTTAGCAAGCTTT...............................................................................................................................................................................................................................................................2612.002002000000000000000000000000000000000000000000000000000000000000
............................................................AAATGGTTACTGGCAATAGTTTT.........................................................................................................................................................................................................................................................................2312.002002000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................TTCCTCTGCTACTCCACATAC....................2112.002001100000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TCCTCTGCTACTCCACATACTG..................2212.002002000000000000000000000000000000000000000000000000000000000000
............................................................................................................TGTTCCTAAGCATATTCATCCAA.........................................................................................................................................................................................................................2312.002002000000000000000000000000000000000000000000000000000000000000
....................................................................ACTGGCAATAGTTTTAGCAAGCTTT...............................................................................................................................................................................................................................................................2512.002002000000000000000000000000000000000000000000000000000000000000
................................................................................................................CCTAAGCATATTCATCCAAAAGCC....................................................................................................................................................................................................................2412.002002000000000000000000000000000000000000000000000000000000000000
..................................................................TTACTGGCAATAGTTTTAGCAAGCTT................................................................................................................................................................................................................................................................2612.002002000000000000000000000000000000000000000000000000000000000000
..........................TAATGAGGATTAAAAATTTTTAAGAA-----TC.................................................................................................................................................................................................................................................................................................2812.002002000000000000000000000000000000000000000000000000000000000000
......................................................................................................................CATATTCATCCAAAAGCC....................................................................................................................................................................................................................1812.002001000000000000000000000000000000000001000000000000000000000000
.............................................................................................................GTTCCTAAGCATATTCATCCAAAAGC.....................................................................................................................................................................................................................2612.002002000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................TTCCTCTGCTACTCCACA.......................1812.002002000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................TAAACGCCAACAAAATATTTTAATAAGTG.......................................................................................................................................................................................2912.002002000000000000000000000000000000000000000000000000000000000000
.............................................................AATGGTTACTGGCAATAGTTTTAGC......................................................................................................................................................................................................................................................................2512.002002000000000000000000000000000000000000000000000000000000000000
.....................................................................................................TGAATTGTGTTCCTAAGCATATT................................................................................................................................................................................................................................2312.002000000000000000000000000010001000000000000000000000000000000000
....................................................................................................................AGCATATTCATCCAAAAGCC....................................................................................................................................................................................................................2012.002002000000000000000000000000000000000000000000000000000000000000
...............................................................TGGTTACTGGCAATAGTTTTAGCAAG...................................................................................................................................................................................................................................................................2612.002002000000000000000000000000000000000000000000000000000000000000
............................................................................................TTTAAAAGTTGAATTGTGTTCCT.........................................................................................................................................................................................................................................2312.002000000002000000000000000000000000000000000000000000000000000000
......................TATGTAATGAGGATTAAAAATTT...............................................................................................................................................................................................................................................................................................................2312.002000000001000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................TCATATATAAA------CTTTAT------TTTT---------ATGTCT....................................................2712.002002000000000000000000000000000000000000000000000000000000000000
.....................................................................................................TGAATTGTGTTCCTAAGCATA..................................................................................................................................................................................................................................2112.002000000001000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................GTCTAGCATAAAGAATTCCTCTGCTAC.............................2712.002000000000000000000000000000002000000000000000000000000000000000
........................................................................................................................................................................................................................................................TCATATATAAA------CTTTAT------TTTT---------ATGTCC....................................................2712.002001010000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TCCTCTGCTACTCCACATACTGTAATGCC...........2911.001000100000000000000000000000000000000000000000000000000000000000
................................................................GGTTACTGGCAATAGTTTTAGCAAGT..................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
..........................TAATGAGGATTAAAAATTTTTAAG..........................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................TTCCTAAGCATATTCATCCAAAAGCCT...................................................................................................................................................................................................................2711.001000000000000000000000000000000000000001000000000000000000000000
......................TATGTAATGAGGATTAAAAATT................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................AA------CTTTAT------TTTT---------ATGTCTAGCAT...............................................2311.001000000000001000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................TCTGCTACTCCACATACTGTAATGCTTA.........2811.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................TATATAAA------CTTTAT------TTTT---------ATGTCTAGCA................................................2811.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................GTGTTCCTAAGCATATTCATCCAAAAGCC....................................................................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................TAGCATAAAGAATTCCTCTG.................................2011.001000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................TAGCATAAAGAATTCCTCTGCTACT............................2511.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................AAACGCCAACAAAATATTTTAATAAGTG.......................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
...........................................TTTTAAGAA-----TTAAAATGGTTACTGGCA.................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TCCTCTGCTACTCCACATACTGTAAT..............2611.001001000000000000000000000000000000000000000000000000000000000000
........................TGTAATGAGGATTAAAAATTTTTAAGA.........................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000001000000000000000000000000000000000
...............................................................TGGTTACTGGCAATAGTTTTAGCA.....................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TCCTCTGCTACTCCACATACTGTAATGCG...........2911.001001000000000000000000000000000000000000000000000000000000000000
..........................................................TAAAATGGTTACTGGCAATAGTTT..........................................................................................................................................................................................................................................................................2411.001000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TACTCCACATACTGTAATGC............2011.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................AAGCATATTCATCCAAAAGCCTAAACGC.............................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
.............................................................AATGGTTACTGGCAATAGTTTTAGCAA....................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TCCTCTGCTACTCCACATACTGT.................2311.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................CACATACTGTAATGCTTATCCACGTGC2711.001000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................................................................TAAA------CTTTAT------TTTT---------ATGTC.....................................................1911.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................TCCACATACTGTAATGCTTATCCACGT..2711.001000000000000000000000000000000000010000000000000000000000000000
............................ATGAGGATTAAAAATTTTTAAGAA-----TC.................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
...................TTATATGTAATGAGGATTAAAAAT.................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000001000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................TCTGCTACTCCACATACTGTAATG.............2411.001100000000000000000000000000000000000000000000000000000000000000
................................................................GGTTACTGGCAATAGTTTTAGCAAG...................................................................................................................................................................................................................................................................2511.001000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................GCATATTCATCCAAAAGCC....................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
...........................................................AAAATGGTTACTGGCAATAGTTTTAGC......................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
...............................AGGATTAAAAATTTTTAAGAA-----T..................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................ATATATAAA------CTTTAT------TTTT---------ATGTC.....................................................2411.001000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................................AATAC-----------------------------------------------------------------------TTCATATATAAA------CTTTAT------T......................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................TCTGCTACTCCACATACTGTAATGC............2511.001001000000000000000000000000000000000000000000000000000000000000
.........................................................TTAAAATGGTTACTGGCAATAGT............................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................AAGCATATTCATCCAAAAGC.....................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.................................................................GTTACTGGCAATAGTTTTAGCAAGC..................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................CTAAGCATATTCATCCAAAAGC.....................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
..............................................................ATGGTTACTGGCAATAGT............................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000001000000000000000000000000
............................................................................................................TGTTCCTAAGCATATTCATCCAAA........................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................GCTACTCCACATACTGTAATGCTTATC.......2711.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................TGTCTAGCATAAAGAATTCCTCTGC................................2511.001001000000000000000000000000000000000000000000000000000000000000
..........................................................TAAAATGGTTACTGGCAATAGT............................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................................................................................................................................................................................................ATAAAGAATTCCTCTGCTACTCCACA.......................2611.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................TATTCATCCAAAAGCCTAAACGCCAACA........................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
..........................TAATGAGGATTAAAAATTTTTAAGAA-----TA.................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
..........................TAATGAGGATTAAAAATTTTTAAGAA-----C..................................................................................................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
...........................AATGAGGATTAAAAATTTTTAAG..........................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
..........................................................TAAAATGGTTACTGGCAATAGTTTTA........................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................TTCCTCTGCTACTCCACATA.....................2011.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................TTCCTCTGCTACTCCACATACTC..................2311.001001000000000000000000000000000000000000000000000000000000000000
..........................TAATGAGGATTAAAAATTTTTAAGAA-----TTA................................................................................................................................................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TCCTCTGCTACTCCACATACTGTA................2411.001001000000000000000000000000000000000000000000000000000000000000
.........................GTAATGAGGATTAAAAATTTTTAAGAA-----T..................................................................................................................................................................................................................................................................................................2811.001000100000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TCCTCTGCTACTCCACATACTGTAATG.............2711.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................TAATAC-----------------------------------------------------------------------TTCATATATAAA------CTTTAT------.......................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
........................................................................GCAATAGTTTTAGCAAGCT.................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................TCATATATAAA------CTTTAT------TTTT---------AT........................................................2311.001001000000000000000000000000000000000000000000000000000000000000
......................TATGTAATGAGGATTAAAAATTTTTC............................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000001000000000000000000000000000000000
.................................................................................................AAGTTGAATTGTGTTCCTAAGCATAT.................................................................................................................................................................................................................................2611.001000000000000000000000000010000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TCCTCTGCTACTCCACATACTGTAATC.............2711.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................TTCCTCTGCTACTCCACATACTGTAAAA.............2811.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TCCTCTGCTACTCCACATACT...................2111.001001000000000000000000000000000000000000000000000000000000000000
...................................................................TACTGGCAATAGTTTTAGCAAGCTTTT..............................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................GCTACTCCACATACTGTAATGCTTATCC......2811.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................TTCCTCTGCTACTCCACATACTGC.................2411.001100000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................AGAATTCCTCTGCTACTCCACATACTG..................2711.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................CTCTGCTACTCCACATACTGTAAT..............2411.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................ATTCCTCTGCTACTCCACATACTGT.................2511.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................TGTTCCTAAGCATATTCATCCAAAAGCA....................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................ACTCCACATACTGTAATGCTTA.........2211.001000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................TCCACATACTGTAATGCTTATCCACG...2611.001000000000000000000000000010000000000000000000000000000000000000
...............................................................TGGTTACTGGCAATAGTTT..........................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................AATTGTGTTCCTAAGCATATTCATCC...........................................................................................................................................................................................................................2611.001000000000000000000000000010000000000000000000000000000000000000
........................TGTAATGAGGATTAAAAATTTTTA............................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................TGTTCCTAAGCATATTCATCCAAT........................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................TGTTCCTAAGCATATTCATC............................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................CTCTGCTACTCCACATACTGTAATG.............2511.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................GTTCCTAAGCATATTCATCCA..........................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................TGTTCCTAAGCATATTCATCCAAAAGCCC...................................................................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................TAGCATAAAGAATTCCTCTGCTACTCCAC........................2911.001001000000000000000000000000000000000000000000000000000000000000
...........................................................AAAATGGTTACTGGCAATAGTTTTA........................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................TTTAAAAGTTGAATTGTGTTCCTAAGCA....................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................TTCATCCAAAAGCCTAAACGCCAACA........................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
......................TATGTAATGAGGATTAAAAAT.................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................CTACTCCACATACTGTAATGC............2111.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................TGAATTGTGTTCCTAAGCAT...................................................................................................................................................................................................................................2011.001000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................TAC-----------------------------------------------------------------------TTCATATATAAA------CTTTAT------TTT....................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................CATACTGTAATGCTTATCCACGTG.2411.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................CATATATAAA------CTTTAT------TTTT---------ATGTC.....................................................2511.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................TGTTCCTAAGCATATTCATCCAAAAGCCA...................................................................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
............................................................................TAGTTTTAGCAAGCTTTTTAAAAGT.......................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.............................................................AATGGTTACTGGCAATAGTTTTAG.......................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
..........................TAATGAGGATTAAAAATTTTTAAGAA-----A..................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................AC-----------------------------------------------------------------------TTCATATATAAA------CTTTAT------TTTT---------ATA.......................................................2711.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................GTTGAATTGTGTTCCTAAGCATATTC...............................................................................................................................................................................................................................2611.001000000000000000000000000010000000000000000000000000000000000000
............................................................................................................TGTTCCTAAGCATATTCATCCAAAA.......................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
...................................................................TACTGGCAATAGTTTTAGCAAGC..................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
................................................................GGTTACTGGCAATAGTTTTAGCAA....................................................................................................................................................................................................................................................................2411.001000000000000000000000000010000000000000000000000000000000000000
...........................AATGAGGATTAAAAATTTTTAAGAA-----...................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................TAAACGCCAACAAAATATTTTAATAA..........................................................................................................................................................................................2611.001000000000000000000000000000000000010000000000000000000000000000
........................TGTAATGAGGATTAAAAATTTTTAAG..........................................................................................................................................................................................................................................................................................................2611.001000000000000010000000000000000000000000000000000000000000000000
....................................................................................................................AGCATATTCATCCAAAAGCCTAAACG..............................................................................................................................................................................................................2611.001000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................C-----------------------------------------------------------------------TTCATATATAAA------CTTTAT------TTTT---------ATG.......................................................2611.001001000000000000000000000000000000000000000000000000000000000000
..........................TAATGAGGATTAAAAATTTTTAAGAA-----TTC................................................................................................................................................................................................................................................................................................2911.001000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................................TAC-----------------------------------------------------------------------TTCATATATAAA------CTTTAT------TTTT---------..........................................................2511.001001000000000000000000000000000000000000000000000000000000000000
........................TGTAATGAGGATTAAAAATTTTT.............................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................GAATTCCTCTGCTACTCCACATACTG..................2611.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................GCATATTCATCCAAAAGCCTAAACGCC............................................................................................................................................................................................................2711.001000010000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................TAAAGAATTCCTCTGCTACTCCAC........................2411.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................GGCAATAGTTTTAGCAAGCT.................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000001000000000000000000000000
.................TTTTATATGTAATGAGGATTAAAAATT................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000010000000000000000000000000000
droMoj3
AAAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-----------------------------------------------------------------------TGTA---------------ATTATGTCAAAAAGTGAATTTTATACAACCAGCATAAAGGATTCCTATGTTATTCCACGTATTGTAATGCCTACACACGAGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
AGTT-------------------------------------------T----------------------------------CAGCAAGTGTTTTTGGAG--GAACTGCGA--CAAGGCAT---------------------------------------------C-------------GAACAAAATCAAATATCAAAGGTCTTTTTAAAAATGGTGGGTTTGCTCTATCAAATAATCGATACTCTTCATCACTGAC------TTTAAT------TCT---------TACACCTAGTATAAAGGATTTCTTTGCTACTCCACGTACTGTAATGCTTATCCACGTGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
ATAT-------------------------------------------CAA-------A--------------------------------------------------------------------------------------------------------------------AT-----------------------------------------------------------------------TTCA-------------T-A----------ATTT---------GATTCTAGCATAAAGGGTTTCTTTGCTACTCCACTTATTGTAATGCCTACCCGCGCGCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................................................................................................................................................................................................................................................................................................................................TATTGTAATGCCTACCCGCGCG.2211.00101000
dp5
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCACAAGGGATTCCTGTGCTACTCCAACTACTGCAACGCCTATCCCCGGGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................................................................................................................................................................................................................................................................................................AACTACTGCAACGCCTATCCCCG...2320.5010100000000
......................................................................................................................................................................................................................................................................................................................................ACTGCAACGCCTATCCCCGG..2020.5010100000000
....................................................................................................................................................................................................................................................................................................................................CTACTGCAACGCCTATCCCC....2020.5010100000000
.........................................................................................................................................................................................................................................................................................................................TGCTACTCCAACTACTGCAACGC............2320.5010100000000
..........................................................................................................................................................................................................................................................................................................................GCTACTCCAACTACTGCAAC..............2020.5010100000000
................................................................................................................................................................................................................................................................................................................GGATTCCTGTGCTACTCCAA........................2020.5010100000000
.......................................................................................................................................................................................................................................................................................................................TGTGCTACTCCAACTACTGCAACGCC...........2620.5010100000000
...........................................................................................................................................................................................................................................................................................................................CTACTCCAACTACTGCAACGC............2120.5010100000000
droPer2
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCACAAGGGATTCCTGTGCTACTCCAACTACTGCAACGCCTATCCCCGGGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................................................................................................................................................................................................................................................................................ACTCCAACTACTGCAACGCC...........2013.003300000
..................................................................................................................................................................................................................................................................................................................................AACTACTGCAACGCCTATCCCCGGG.2512.002200000
...........................................................................................................................................................................................................................................................................................................................CTACTCCAACTACTGCAACGCC...........2212.002200000
............................................................................................................................................................................................................................................................................................................................TACTCCAACTACTGCAACGCCTATCCC.....2712.002200000
......................................................................................................................................................................................................................................................................................................................CTGTGCTACTCCAACTACTGC.................2111.001010000
............................................................................................................................................................................................................................................................................................................................TACTCCAACTACTGCAACGCC...........2111.001100000
...............................................................................................................................................................................................................................................................................................................GGGATTCCTGTGCTACTC...........................1811.001100000
...........................................................................................................................................................................................................................................................................................................................CTACTCCAACTACTGCAACGCCT..........2311.001100000
..............................................................................................................................................................................................................................................................................................................................CTCCAACTACTGCAACGC............1811.001100000
................................................................................................................................................................................................................................................................................................................................CCAACTACTGCAACGCCT..........1811.001100000
.....................................................................................................................................................................................................................................................................................................................................TACTGCAACGCCTATCCCCGGG.2211.001100000
droAna3
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCACAAAGGTTTCCTTTGCTATTCCACCTACTGCAACGCCTATCCTCGTGCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
ACTTTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----------------------------------------------------------------------TTT---------------CTACCA-------------------TTCTCTAGCACAAAGGCTTCCTATGCTACTCCACCTACTGCAATGCCTATCCTCGCGCSizeHit CountTotal NormTotal
No Reads
droKik1
TCAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAT------------------------------------------------------------------------AAAACTTAC-TATCT------TTCA---------CCCGCCAGCACAAAGGTTTCCTCTGCTATTCCACTTATTGCAACGCCTATCCCCGGGCSizeHit CountTotal NormTotal
No Reads
droFic1
ATAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-----------------------------------------------------------------------TTCA---------------TATAT------TTTT-------GTGTACTTAGCACAAGGGTTTTTTATGCTACTCAACCTACTGCAACGCCTATCCCCGAGCSizeHit CountTotal NormTotal
No Reads
droEle1
AAAT-------------------------------------------TT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAA------TCG---------TTTCTTAAGCACAAAGGATTTCTATGCTACTCCAACTACTGCAACGCTTATCCCCGAGCSizeHit CountTotal NormTotal
No Reads
droRho1
AAAATG-------------------GTAATGAGAGTTGGATTTTCTTTAATA-----TAAAAGCC------------------------------------------------G--------------------------------------------------------------TTTTA------------------------------------------------------------------------CATGTG------CTATCA------TTTT---------TTTTTCAGCATAAAGGATTTCTATGCTACTCAAGCTACTGCAACGCATATCCCCGAGCSizeHit CountTotal NormTotal
No Reads
droBia1
ATTT-------------------------------------------TAATAATTGGTT------------------------------------------------GCCTTCT--------------------------------------------------------------T---TAAT------------------------------------------------------------------------AAATCATAC-------------------------AATTGCAGCACAAAGGTTTCCTCTGCTACTCCACTTACTGCAACGCTTATCCTAGAGCSizeHit CountTotal NormTotal
No Reads
droTak1
AGAAGA----------------------------CTTTGATTT----AAATACTTAGTAAAAACC------------------------------------------------T--------------------------------------------------------------TTACA------------------------------------------------------------------------CATAAA------TTATAA-------------------TTTTTCAGCACAAAGGTTTTCTATGCTACTCCACCTACTGCAACGCCTATCCTCGAGCSizeHit CountTotal NormTotal
No Reads
droEug1
TGAT-----------------------------------------------AATCAGT--------------------------------------------------------------------------------------------------------------------TTT---GAAT------------------------------------------------------------------------AAATTGTAC-T-----------------------TTCTGCAGCACAAAGGGTTTCTATGCTATTCCACATACTGCAACGCATATCCCCGAGCSizeHit CountTotal NormTotal
No Reads
dm3
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCACAAAGGTTTCCTTTGCTACTCCACCTATTGTAACGCATACCCTCGAGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................................................................................................................................................................................................................................................................TCCACCTATTGTAACGCATACCCTCGA..2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................TCCACCTATTGTAACGCATACCCTCGAGC2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................TTTGCTACTCCACCTATTGT.................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................................................................................................................................................................................................................................ACCTATTGTAACGCATACCCT.....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................CACCTATTGTAACGCATACCCTCGAGC2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCATAAAGGTTTCCTATGCTACTCCACCTATTGTAACGCATACCCTCGAGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCATAAAGGTTTCCTATGCTACTCCACCTATTGTAACGCATACCCTCGAGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................................................................................................................................................................................................................................................................................................TTGTAACGCATACCCTCGAGC2111.0011000
droYak3
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCACAAAGGTTTCCTATGCTACTCCACCTACTGCAACGCATACCCTCGAGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................................................................................................................................................................................................................................................................................................................................CACCTACTGCAACGCATACCCTCG...2411.00101000000000
droEre2
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCACAAAGGTTTCCTATGCTACTCCACCTATTGCAACGCATACCCTCGAGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/19/2015 at 10:49 AM