ID:

dvi_642

 Coordinate:

scaffold_10322:446727-446789 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-2.4 -2.2 -2.1

Flybase annnotation

exon [dvir_GLEANR_16525:4]; CDS [Dvir\GJ16098-cds]; exon [dvir_GLEANR_16525:3]; CDS [Dvir\GJ16098-cds]; intron [Dvir\GJ16098-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------##################################################
CTCGAAACTGAAATTAATTACGTAAAGCTTCTCGCTTCGATTTGCGATGGGTAAGTAAATAACGCAATAGTCAAGAAATACGCACAAAAAATAATTCATCTTTATTATTTTAGGTTTTTGCCTGCCATGAGCAAACGCATTGATATATTTTCTCCCAACAGCA
**************************************************.....................................((((((((........))))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060688
160_ovaries_total
 SRR060675
140x9_ovaries_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060679
140x9_testes_total
 SRR060689
160x9_testes_total
 SRR060654
160x9_ovaries_total
 GSM1528803
follicle cells		 SRR060658
140_ovaries_total
 SRR060663
160_0-2h_embryos_total
 SRR060674
9x140_ovaries_total
 SRR060678
9x140_testes_total
 SRR060683
160_testes_total
 SRR060655
9x160_testes_total
 SRR060670
9_testes_total
 SRR060673
9_ovaries_total
 SRR060676
9xArg_ovaries_total
 V047
embryo
 SRR060668
160x9_males_carcasses_total
.........................................................................................................................................CATTGATATATTTTCTCCCAACAGCA 26 0 1 68.00 68 58 3 1 1 2 0 2 0 0 0 0 0 0 0 0 0 0 1 0
...............AATTACGTAAAGCTTCTCGCTTCG............................................................................................................................ 24 0 1 28.00 28 20 5 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................TAGTCAAGAAATACGCACAAAAAATAAT.................................................................... 28 0 1 23.00 23 12 0 4 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............AATTACGTAAAGCTTCTCGCTTCGATT......................................................................................................................... 27 0 1 15.00 15 14 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................TTCATCTTTATTATTTTAGGTTTTTGCC......................................... 28 0 1 13.00 13 12 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............AATTACGTAAAGCTTCTCGCTTCGA........................................................................................................................... 25 0 1 11.00 11 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................TAGTCAAGAAATACGCACAAAAAATAA..................................................................... 27 0 1 11.00 11 7 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................CATTGATATATTTTCTCCCAACAG.. 24 0 1 10.00 10 8 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................TTCATCTTTATTATTTTAGGTTTTTGC.......................................... 27 0 1 10.00 10 5 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............AATTACGTAAAGCTTCTCGCTTC............................................................................................................................. 23 0 1 9.00 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................CATTGATATATTTTCTCCCAAC.... 22 0 1 7.00 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................CATTGATATATTTTCTCCCAACAGC. 25 0 1 7.00 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............AATTACGTAAAGCTTCTCGCTTCGAT.......................................................................................................................... 26 0 1 7.00 7 6 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................AACGCATTGATATATTTTCTCCCAACA... 27 0 1 7.00 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............AATTACGTAAAGCTTCTCGC................................................................................................................................ 20 0 1 6.00 6 1 2 0 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0
.........................................................................................................................................CATTGATATATTTTCTCCCAACA... 23 0 1 6.00 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................TTGATATATTTTCTCCCAACAGCA 24 0 1 6.00 6 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............TTAATTACGTAAAGCTTCTCGCTTC............................................................................................................................. 25 0 1 5.00 5 0 0 3 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................TAGTCAAGAAATACGCACAAAAAATA...................................................................... 26 0 1 5.00 5 3 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................CATTGATATATTTTCTCCCAA..... 21 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................ATTGATATATTTTCTCCCAACAGCA 25 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................TAGTCAAGAAATACGCACAAAAAATAATT................................................................... 29 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............AATTACGTAAAGCTTCTCGCT............................................................................................................................... 21 0 1 5.00 5 1 2 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0
...................................................................TAGTCAAGAAATACGCACAAAAAAT....................................................................... 25 0 1 4.00 4 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............TTAATTACGTAAAGCTTCTCGCTTCGA........................................................................................................................... 27 0 1 4.00 4 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............AATTACGTAAAGCTTCTCGCTT.............................................................................................................................. 22 0 1 4.00 4 3 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................TAGTCAAGAAATACGCACAAAA.......................................................................... 22 0 1 4.00 4 0 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................ATTACGTAAAGCTTCTCGCTTCG............................................................................................................................ 23 0 1 4.00 4 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................TTACGTAAAGCTTCTCGCTTCG............................................................................................................................ 22 0 1 4.00 4 0 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................ACGCAAAGCTTCCCGGTTCGA........................................................................................................................... 21 3 1 4.00 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................ATTGATATATTTTCTCCCAACA... 22 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................TCATCTTTATTATTTTAGGTTTTTGCC......................................... 27 0 1 3.00 3 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................TAGTCAAGAAATACGCACAAAAA......................................................................... 23 0 1 3.00 3 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................AACGCATTGATATATTTTCTCCCAAC.... 26 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................AACGCATTGATATATTTTCTCCCAACAGC. 29 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............AATTACGTAAAGCTTCTCG................................................................................................................................. 19 0 1 3.00 3 0 1 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0
.................TTACGTAAAGCTTCTCGCTTCGATT......................................................................................................................... 25 0 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................TAGTCAAGAAATACGCACAAAAAA........................................................................ 24 0 1 3.00 3 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................TGATATATTTTCTCCCAACAGCA 23 0 1 3.00 3 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............TTAATTACGTAAAGCTTCTCGCTTCG............................................................................................................................ 26 0 1 3.00 3 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................TAGTCAAGAAATACGCACAAA........................................................................... 21 0 1 2.00 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............TTAATTACGTAAAGCTTCTCGCTTCGATT......................................................................................................................... 29 0 1 2.00 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................TGCGATGGGTAAGTAAATAACG................................................................................................... 22 0 1 2.00 2 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0
...............AATTACGTAAAGCTTCTCGCTTCGT........................................................................................................................... 25 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................TTCATCTTTATTATTTTAGGTTTTTG........................................... 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................TAGTCAAGAAATACGCACAA............................................................................ 20 0 1 2.00 2 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................TGGGTTTTTGCCTGCCATGAGCAAACG.......................... 27 1 1 2.00 2 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................TTTGCGATGGGTAAGTAAATAACGCAA................................................................................................ 27 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............AATTACGTAAAGCTTCTCGCTTCA............................................................................................................................ 24 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................ATTACGTAAAGCTTCTCGCTT.............................................................................................................................. 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................ATTGATATATTTTCTCCCAACAG.. 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................CATTGATATATGTTCTCCCAACAGCA 26 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................ATTACGTAAAGCTTCTCGCTTCGA........................................................................................................................... 24 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................TAGTCAAGAAATACGCACA............................................................................. 19 0 1 2.00 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0
.................TTACGTAAAGCTTCTCGCTTCGAT.......................................................................................................................... 24 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................TAAAGCTTCTCGCTTCGATTTGCGA.................................................................................................................... 25 0 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0
...............AATTACGTAAAGCTTCTCGCTTT............................................................................................................................. 23 1 1 2.00 2 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................TTTAGGTTTTTGCCTGCCATGAGC............................... 24 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...GAAACTGAAATTAATTACGTAAAGCTT..................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................TAGTCAAGAAATACGCACAAAAAATAAAA................................................................... 29 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................CATTGATATATTTTCCCCCAAA.... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........TGAAATTAATTACGTAAAGCTTCTCGC................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................TCTCGCTTCGATTTGCGATGGGTAAG............................................................................................................ 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................TTACGTAAAGCTTCTCGCTTC............................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......ACTGAAATTAATTACGTAAAGCTTC.................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................CATTGATATATTTTCTCCCAAAA... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................TATATTTTCTCCCAACAGC. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................TTGCGATGGGTAAGTAAATAACGCAATA.............................................................................................. 28 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............AATTACGTAAAGCTTCTCGCTTTA............................................................................................................................ 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................TTCTCGCTTCGATTTGCGATGGGTAA............................................................................................................. 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
................................................................CAATAGTCAAGAAATACGCACAAA........................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................TTTAGGTTTTTGCCTGCCATGAGCAAAC........................... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................TGCCATGAGCAAACGCATTGATATATC.............. 27 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................ATTGATATATTTTCTCCCAAC.... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...GAAACTGAAATTAATTACGTAAAGCTTC.................................................................................................................................... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............TTAATTACGTAAAGCTTCTCGCT............................................................................................................................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................ATTACGTAAAGCTTCTCGCTTCGATT......................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................TAGTCAAGAAATACGCACAAAAAATAATC................................................................... 29 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................CAAGAAATACGCACAAAAAATAATC................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................TTGCCTGCCATGAGCAAACGCATTGA.................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............AATTACGTAAAGCTTCTCGT................................................................................................................................ 20 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............AATTACGTAAAGCTTCACGCTTCG............................................................................................................................ 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................AACGCATTGATATATTTTCTCCCA...... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................TATTTTCTCCCAACAGCA 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................TTACGTAAAGCTTCTCGCTTCGA........................................................................................................................... 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............AATTACGTAAAGCTTCTCGCTTCGATAA........................................................................................................................ 28 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............AATTACGTAAAGCTTCCCGCTTCG............................................................................................................................ 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................CAATAGTCAAGAAATACGCACAAAAAA........................................................................ 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................ATTACGTAAAGCTTCTCGCT............................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
............ATTAATTACGTAAAGCTTCTC.................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...................................................................TAGTCAAGAAATACGCACAAAAAATAAA.................................................................... 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........GAAATTAATTACGTAAAGCTTCTCGC................................................................................................................................ 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................ATTATTTTAGGTTTTTGCC......................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................CATTGATATATTTTCTCCCAT..... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................GCATTGATATATTTTCTCCCAACA... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................AATAGGCAAGAAATACGCACAAAAAA........................................................................ 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........GGTTAATTACGTAAAGCTTCTCGC................................................................................................................................ 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................TACGTAAAGCTTCTCGCTTCGATTTGC...................................................................................................................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................TAGTCAAGAAATACGCACAATTT......................................................................... 23 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................CGCATTGATATATTTTCTCCCAACAGCA 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................GATATATTTTCTCCCAACAGCA 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................CTTGATATATTTTCTCCCAACAGCA 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................CATTGATATATGTTCTCCCAAC.... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................ATAGTCAAGAAATACGCACAAAAAATC...................................................................... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................TTGCGATGGGTAAGTAAATCCCCC.................................................................................................. 24 3 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................CCTGCCATGAGCAAACGCATTGATAT................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................TGATATATTTTGTCCCAACAGCA 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................CTTTATTATTTTAGGTTTTTGCC......................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................CTTCGATTTGCGATGGGTAAG............................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.........................................................................................................................................CATTGATATATTTTCTCCCAACAA.. 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............TAATTACGTAAAGCTTCTCGCTTCGA........................................................................................................................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................CATTGATATATTTTCTCCC....... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................ATCTTTATTATTTTAGGTTTTTGCC......................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................CAAACGCATTGATATATTTTCTCCCAACA... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............TTAATTACGTAAAGCTTCTCG................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................TTTTTGCCTGCCATGAGCAAACGCAT....................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TTAGGTTTTTGCCTGCCATGAGCAAAC........................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................ATTACGTAAAGCTTCTCGCTTCT............................................................................................................................ 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................TTCATCTTTATTATTTTAGGTTTTT............................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................ATAGTCAAGAAATACGCACAAAAAATA...................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................TGATATATTTTCTCCCAACAG.. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........TGAAATTAATTACGTAAAGCTC..................................................................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.......................AAAGCTTCTCGCTTCGATTTGCGATG.................................................................................................................. 26 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................TCATTGATATATTTTCTCCCAACA... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................ATTACGTAAAGCTTCTCGCTTC............................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................CATTGATATATTTTCTCCCAACATT. 25 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................ATTGATATATTTTCTCCCAAT.... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................CGTTGATATATTTTCTCCCAACAGCA 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................AGTCAAGAAATACGCACAAAAAATAA..................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................AATAGTCAAGAAATACGCACAAAAAA........................................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................TTACGTAAAGCTTCTCGCTT.............................................................................................................................. 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................CGCATTGATATATTTTCTCC........ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................CGCATTGATATATTTTCTCCCAACAGC. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TGCCTGCCATGAGCAAACGCA........................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................GCATTGATATATTTTCTCCCAACAGCA 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................AATAGTCAAGAAATACGCACAAAAT......................................................................... 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................AATAGTCAAGAAATACGCACAA............................................................................ 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTAAATAACGCAATAGTCAAA........................................................................................ 25 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.........................................................................................................................................CATTGATATATTTTCTCCCA...... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................CTGCCATGAGCAAACGCATT...................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................GCATTGATATATTTTCTCCCAAC.... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................AAGAAATACGCACAAAAAATAA..................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................TAGTCAAGAAATACGCCA.............................................................................. 18 2 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................ACAAAAAATAATCCATGTT............................................................. 19 2 17 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

GAGCTTTGACTTTAATTAATGCATTTCGAAGAGCGAAGCTAAACGCTACCCATTCATTTATTGCGTTATCAGTTCTTTATGCGTGTTTTTTATTAAGTAGAAATAATAAAATCCAAAAACGGACGGTACTCGTTTGCGTAACTATATAAAAGAGGGTTGTCGT
**************************************************.....................................((((((((........))))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060688
160_ovaries_total
 SRR060654
160x9_ovaries_total
 SRR060675
140x9_ovaries_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060689
160x9_testes_total
 SRR060679
140x9_testes_total
 SRR060663
160_0-2h_embryos_total
 SRR060683
160_testes_total
 SRR060656
9x160_ovaries_total
 SRR060658
140_ovaries_total
 M061
embryo
 SRR060655
9x160_testes_total
 SRR060661
160x9_0-2h_embryos_total
 V116
male body		 M027
male body		 SRR060657
140_testes_total
 SRR060678
9x140_testes_total
 V047
embryo
 SRR1106729
mixed whole adult body
 SRR060668
160x9_males_carcasses_total
 V053
head
 SRR060667
160_females_carcasses_total
 SRR060685
9xArg_0-2h_embryos_total
..........................................................................................................................ACGGTACTCGTTTGCGTAACTATAT................ 25 0 1 235.00 235 198 22 10 0 0 0 0 0 2 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0
.....................................................TCATTTATTGCGTTATCAGTTCTT...................................................................................... 24 0 1 90.00 90 22 40 9 6 2 1 0 3 1 1 2 0 0 1 0 0 2 0 0 0 0 0 0 0
.......................................................................................................................CGGACGGTACTCGTTTGCGTAACTATAT................ 28 0 1 75.00 75 72 0 1 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................GGACGGTACTCGTTTGCGTAACTATAT................ 27 0 1 72.00 72 64 2 1 1 0 0 0 1 0 0 0 2 0 0 0 0 0 0 1 0 0 0 0 0
.................................................CCATTCATTTATTGCGTTATCAGTTCTT...................................................................................... 28 0 1 57.00 57 22 20 2 5 4 1 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................TGCGTGTTTTTTATTAAGTAGAAAT........................................................... 25 0 1 53.00 53 7 19 9 1 3 5 1 0 2 1 3 0 2 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................CGGTACTCGTTTGCGTAACTATAT................ 24 0 1 49.00 49 38 6 3 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CATTCATTTATTGCGTTATCAGTTCTT...................................................................................... 27 0 1 42.00 42 16 12 2 3 8 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................GACGGTACTCGTTTGCGTAACTATAT................ 26 0 1 32.00 32 26 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................GGTACTCGTTTGCGTAACTATAT................ 23 0 1 28.00 28 19 4 0 1 0 2 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................GGACGGTACTCGTTTGCGTAACT.................... 23 0 1 23.00 23 10 6 5 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................GGTACTCGTTTGCGTAACTATATAAA............. 26 0 1 20.00 20 3 1 0 10 3 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................ATTCATTTATTGCGTTATCAGTTCTT...................................................................................... 26 0 1 17.00 17 11 4 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................ACGGTACTCGTTTGCGTAACTATA................. 24 0 1 16.00 16 15 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................GGACGGTACTCGTTTGCGTAACTAT.................. 25 0 1 15.00 15 1 1 0 2 1 0 0 6 1 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0
.............................................................................TATGCGTGTTTTTTATTAAGTAGAAAT........................................................... 27 0 1 14.00 14 6 3 0 1 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................TTCATTTATTGCGTTATCAGTTCTT...................................................................................... 25 0 1 13.00 13 10 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................CCATTCATTTATTGCGTTATCAGTTCT....................................................................................... 27 0 1 12.00 12 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................ACGGACGGTACTCGTTTGCGTAACT.................... 25 0 1 10.00 10 1 7 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................ACTCGTTTGCGTAACTATATAAA............. 23 0 1 10.00 10 4 0 2 0 1 0 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................CATTTATTGCGTTATCAGTTCTT...................................................................................... 23 0 1 10.00 10 3 2 3 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................CCCATTCATTTATTGCGTTATCAGTTCTT...................................................................................... 29 0 1 9.00 9 4 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................GGACGGTACTCGTTTGCGTAACTATA................. 26 0 1 9.00 9 8 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................GCGTGTTTTTTATTAAGTAGAAAT........................................................... 24 0 1 7.00 7 2 2 1 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TCATTTATTGCGTTATCAGTTCT....................................................................................... 23 0 1 7.00 7 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................ATGCGTGTTTTTTATTAAGTAGAAAT........................................................... 26 0 1 7.00 7 4 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................ACGGTACTCGTTTGCGTAACTATATAA.............. 27 0 1 7.00 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................GTACTCGTTTGCGTAACTATATAAA............. 25 0 1 6.00 6 2 0 0 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................CGGTACTCGTTTGCGTAACT.................... 20 0 1 6.00 6 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................GGTACTCGTTTGCGTAACTATATAA.............. 25 0 1 6.00 6 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ATTTATTGCGTTATCAGTTCTT...................................................................................... 22 0 1 6.00 6 1 2 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................CGTGTTTTTTATTAAGTAGAAAT........................................................... 23 0 1 6.00 6 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................GACGGTACTCGTTTGCGTAACT.................... 22 0 1 6.00 6 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................ACGGTACTCGTTTGCGTAACTAT.................. 23 0 1 6.00 6 5 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTATTGCGTTATCAGTTCTT...................................................................................... 20 0 1 5.00 5 0 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................CGGACGGTACTCGTTTGCGTAACTATA................. 27 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................GTACTCGTTTGCGTAACTATAT................ 22 0 1 5.00 5 2 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................ACGGACGGTACTCGTTTGCGTAACTAT.................. 27 0 1 5.00 5 1 3 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GAGCTTTGACTTTAATTAATGCATT.......................................................................................................................................... 25 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................CGGTACTCGTTTGCGTAACTATATAAA............. 27 0 1 5.00 5 3 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................CGGACGGTACTCGTTTGCGTAACTAT.................. 26 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................CCCATTCATTTATTGCGTTATCAGTT......................................................................................... 26 0 1 4.00 4 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................GACGGTACTCGTTTGCGTAACTATA................. 25 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.AGCTTTGACTTTAATTAATGCATT.......................................................................................................................................... 24 0 1 4.00 4 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................GGACGGTACTCGTTTGCGTAAC..................... 22 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TCATTTATTGCGTTATCAGTTCTTT..................................................................................... 25 0 1 4.00 4 2 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................ACTCGTTTGCGTAACTATATAA.............. 22 0 1 3.00 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................CTCGTTTGCGTAACTATATAA.............. 21 0 1 3.00 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................CGGACGGTACTCGTTTGCGTAACT.................... 24 0 1 3.00 3 2 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................CCATTTATTGCGTTATCAGTTCTT...................................................................................... 24 1 1 3.00 3 1 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................GTACTCGTTTGCGTAACTATATAA.............. 24 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................GGACGGTACTCGTTTGCGTAA...................... 21 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................GGTACTCGTTTGCGTAACTAT.................. 21 0 1 3.00 3 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................ACGGACGGTACTCGTTTGCGTAACTA................... 26 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................CGTTTGCGTAACTATATAAA............. 20 0 1 3.00 3 0 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................ACATTCATTTATTGCGTTATCAGTTCTT...................................................................................... 28 1 1 3.00 3 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................CTCATTTATTGCGTTATCAGTTCTT...................................................................................... 25 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................TACTCGTTTGCGTAACTATATAA.............. 23 0 1 3.00 3 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TGCGTTATCAGTTCTTTATGCGTGT............................................................................. 25 0 1 2.00 2 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................CCGGTACTCGTTTGCGTAACTATAT................ 25 1 1 2.00 2 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TGCGTTATCAGTTCTTTATGCGTGTT............................................................................ 26 0 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................TTATGCGTGTTTTTTATTAAGTAGAAAT........................................................... 28 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................GGACGGTACTCGTTTGCGTAACTA................... 24 0 1 2.00 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................CCATTCATTTATTGCGTTATCAGTT......................................................................................... 25 0 1 2.00 2 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................CGGTACTCGTTTGCGTAACTATATAA.............. 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................TACTCGTTTGCGTAACTATATAAA............. 24 0 1 2.00 2 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................ACGGTACTCGTTTCCGTAACTATAT................ 25 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................CGGTACTCGTTTGCGTAACTATA................. 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................ACGGTACTCGTTTGCGTAACTATATA............... 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................TGCGTGTTTTTTATTAAGTAGAAA............................................................ 24 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................GACGGTACTCGTTTGCGTAAC..................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................ACGGTACTCGTTTGCGTAACT.................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................TGCGTGTTTTTTATTAAGTAGAAATA.......................................................... 26 0 1 2.00 2 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................AAATGCGTGTTTTTTATTAAGTAGAAAT........................................................... 28 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................TTGCGTGTTTTTTATTAAGTAGAAAT........................................................... 26 1 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................CTGTACTCGTTTGCGTAACTATAT................ 24 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................GTGTTTTTTATTAAGTAGAAAT........................................................... 22 0 1 2.00 2 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................CCCATTCATTTATTGCGTTATCAGTTC........................................................................................ 27 0 1 2.00 2 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................CGTGTTTTTTATTAAGTAGAAATA.......................................................... 24 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.AGCTTTGACTTTAATTAATGCATTC......................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................GACGGTACTCGTTTACGTAACTATAT................ 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................CCATTCATTTATTGCGTTGTCAGTTCTT...................................................................................... 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TCATTTATTGCGTTATCAGTTATT...................................................................................... 24 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TTGCGTAACTATATAAAAGAG......... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................ACGGTACCCGTTTGCGTAACTATAT................ 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................AATATTCATTTATTGCGTTATCAGTTCTT...................................................................................... 29 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................GCGTTATCAGTTCTTTATGCGTGTT............................................................................ 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................CGGTACTCGTTTGCGTAACTATATA............... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................GGACGGTACTCGTTTGCGTAATTAT.................. 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................TGCGTGTTCTTTCTTAAGTAGACAT........................................................... 25 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................CTACCCATTCATTTATTGCGTTATCAGTT......................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TCATTTATTGCGTTATCAGTTC........................................................................................ 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TATGCGTGTTTTTTATTAAGCAGAAAT........................................................... 27 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................ACGGTACTCGTTTGCGTAACTGTAT................ 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..GCTTTGACTTTAATTAATGCATTTC........................................................................................................................................ 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................GCTAAACGCTACCCATTCAT.......................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................ACGGTACTCGTTTGCGTAA...................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................CGTTATCAGTTCTTTATGCGTGTTTTTT........................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................CATTTCGAAGAGCGAAGCTAAACGCT.................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................CCGGTACTCGTTTGCGTAACTATATAAA............. 28 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..GCTTTGACTTTAATTAATGCATT.......................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................GATACTCGTTTGCGTAACTATATAAA............. 26 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ATTTATTGCGTTATCAGTTCTTTAT................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................AACGGTACTCGTTTGCGTAACTATA................. 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................ACGGACGGTACTCGTTTGCGTAA...................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TTGCGTAACTATATAAAAGAGGGTT..... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CATTCATTTATTGCGTTATCAGTTCT....................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................ATTGCGTTATCAGTTCTT...................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................CCATTCATTTATTGCGTTATCAGTTCTTA..................................................................................... 29 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................TTACGGTACTCGTTTGCGTAACT.................... 23 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................ACCCATTCATTTATTGCGTTAT.............................................................................................. 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................GGTACTCGTTTGCGTAAC..................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TTTTTTATTAAGTAGAAAT........................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................ACGGACGGTACTCGTTTGCGTAAC..................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................GAAATAATAAAATCCAAAAACGGACGGT.................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................TATTGCGTTATCAGTTCTTTATG.................................................................................. 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................TACCCATTCATTTATTGCGTTATCAGTTC........................................................................................ 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................TATGTACTCGTTTGCGTAACTATATAAA............. 28 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................GACGGTACTCGTTTGCGTAGCTATAT................ 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................GACGGTACTCGTTTGCGTAACTAT.................. 24 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................AGCGGTACTCGTTTGCGTAACTATAT................ 26 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................AACGGTACTCGTTTGCGTAACTATAT................ 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TATGAGTGTTTTTTATTAAGTAGAAAT........................................................... 27 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................AATGCGTGTTTTTTATTAAGTAGAAAT........................................................... 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................GGACGGTACACGTTTGCGTAACTATAT................ 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................TTCTTTATGCGTGTTTTTTATTAAGT................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................CCCATTCATTTATTGCGTTATCAGTTCT....................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................ATTCATTTATTGCGTTATCA............................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TCATTTATTGCGTTATTAGTTCTT...................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................ACCCATTCATTTATTGCG.................................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TGCTTTATCAGTTCTTTATGCGTG.............................................................................. 24 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................ACGCTACCCATTCATTTATTGCGTTATC............................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GAGCTTTGACTTTAATTAATGCAT........................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..GCTTTGACTTTAATTAATGCATTT......................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CCTTCATTTATTGCGTTATCAGTTCTTTA.................................................................................... 29 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................CGGACGGTACTCGTTTGCGTAACTATATC............... 29 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GAGCTTTGACTTTAATTAATGCATTTC........................................................................................................................................ 27 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................TGGACGGTACTCGTTTGCGTAACT.................... 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................ACGGACGGTACTCGTTTGCGTAACTATAT................ 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................CGTAACTATATAAAAGAGGGTTG.... 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................CCGGTACTCGTTTGCGTAACT.................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................GGTACTCGTTTGCGTAACTA................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................ATTCATTTATTGCGTTATCAGTTGAT...................................................................................... 26 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................ACCCATTCATTTATTGCGTTATCAG........................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TCATTTATTGCGTTATCAGTTCTTA..................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................TGCCTGTTTTTTATTAAGTAGAAAT........................................................... 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................CCATTCATTTATTGCGTTATCA............................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GAGCTTTGACTTTAATTAATGCA............................................................................................................................................ 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................CCATTCATTTATTGCGTT................................................................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................CCATTTATTGCGTTATCAGTTCT....................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................ACGGTACTCGTTTGCGTAAC..................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................GTTTGCGTAACTATATAAAAG........... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................GGTACTCGTTTGCGTAACTATA................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................ATTTATTGCGTTATCAGT.......................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GAGCTTTGACTTTAATTAATGCATTT......................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................GGGACGGTACTCGTTTGCGTAACTATAT................ 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................ATTCATTTATTGCGTTATCAGTTCT....................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................CGGTACTCGTTTGCGTAACTATATGCA............. 27 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................ACTCGTTTGCGTAACTATAT................ 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................CGAAGCTAAACGCTACCCATTCATTTATT..................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TATTCATTTATTGCGTTATCAGTTCTT...................................................................................... 27 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..GCTTTGACTTTAATTAATGCA............................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................TTTATTGCGTTATCAGTTCTT...................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................CGTTTGCGTAACTATATAAAA............ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................TTTATTGCGTTATCAGTTC........................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................TGACGGTACTCGTTTGCGTAACTAT.................. 25 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................ACTGTACTCGTTTGCGTAACTATAT................ 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TTGCGTAACTATATAAAAGAGGGTTGT... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................GTACTCGTTTGCGTAACTATA................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................CATTTATTGCGTTATCAGTTCT....................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................CGGACGGTACTCGTTTGCGTAACTC................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................CGGACGGTACTCGTTTGCGTAACTA................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................TACCCATTCATTTATTGCGTTATCAGTT......................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TCCTTTATTGCGTTATCAGTTCTT...................................................................................... 24 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................ACGCTACCCATTCATTTATTGCGTTAT.............................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................TCGAAGAGCGAAGCTAAACGC..................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................AGAGCGAAGCTAAACGCTACCCATTCA........................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................GACGGTACTCGTTTGCGTA....................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................ATATGCGTGTTTTTTATTAAGTAGAAAT........................................................... 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................TGCTTGTTTTTTATTAAGTAGAAAT........................................................... 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................CACGGTACTCGTTTGCGTAACTATAT................ 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................CTCGTTTGCGTAACTATATAAA............. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................CGGACGGTACTCGTTTGCGTAACTATATA............... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................GTCATTTATTGCGTTATCAGTTCTT...................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................GACGGTACTCGTTTGCGTAA...................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................ACCCATTCATTTATTGCGTTATCAGTTC........................................................................................ 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................CATTTATTGCGTTATCAGTTC........................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................GCTATACGCTACCCATTCATTTATT..................................................................................................... 25 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TCGGACGGTACTCGTTTGCGTAACT.................... 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................GACGGTACTCGTTCGCGCAACTATAT................ 26 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................ATTACGGTACTCGTTTGCGTAACT.................... 24 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................GTACTCGTTTGCGTAACTATATA............... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TATGCGTGTTTTTTATTAAGTAGAAATA.......................................................... 28 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TCATTTATTGCGTTATCAGTTCCT...................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................TGTTTTTTATTAAGTAGAAAT........................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................CGGACGGTACTCGTTTACGTAACTATAT................ 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................TGGACGGTACTCGTTTGCGTAACTATAT................ 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.AGCTTTGACTTTAATTAATGCATTTC........................................................................................................................................ 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................TGCGGGTTTTTTATTAAGTAGAAAT........................................................... 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................AACTCGTTTGCGTAACTATATAAA............. 24 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................CCGTGTTTTTTATTAAGTAGAAAT........................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................CCATTCATTTATTGCGTTATCAGTTC........................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................CGTTTGCGTAACTATATAAAAGAGGGTT..... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................GGACGGTCATCGTTTGCGTAACT.................... 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................AGAGCGAAGCTAAACGCTACCCATTCATT......................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................GGTGCTCGATTGCGTAAATAT.................. 21 3 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................GGACGGTACTCGTTTGCG......................... 18 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................TAAATGTTTTTTATTAAGTAGAAAT........................................................... 25 3 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................ATAAAGTAGAAATGATAA...................................................... 18 2 20 0.20 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 1
.....................................................TCAATTAATGCGATATCAGT.......................................................................................... 20 3 13 0.15 2 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................ATACTAAAATCCAAAAA............................................ 17 1 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...............................................................................................................TCAAAGAACAGACGGTACTC................................ 20 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
........................................................TTTATTGCCTTCTCAGTT......................................................................................... 18 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_10322:446677-446839 + dvi_642 CTCGAAACTGAAATTAATTACGTAAAGCTTCTCGCTTCGATTTGCGATGGGTAAGTAAAT-AACGCAATAG-----TCAAG--AAATACGCACAAAAAATA----------------ATT-------------------------------CATCTTTATTATTTTAGGTTTTTGCCTGCCATGAGCAAACGCATTGATATATTTTCTCCCAACAGCA
droMoj3 scaffold_6680:2480263-2480426 + TTAGAAACCGAAGTCAATTACGTAAAGCTGCTGGCTTCAATTTGCGACGGGTAAGCATTG------------------ACTTTG-TGC-------TCAATGATA-------------AATGATCTCTAATTGA------------TTTT---GTAATTATTTCTATAGGTATCTGCCTGCCATGAGCAAGCGCATCGATATATTTTCGCCGAACAGCA
droGri2 scaffold_15110:89215-89372 - CTCGAAACTGAAGTCAATTACGTAAAGCTTCTGGCTGCCATTTGTGATGGGTAATAAATC------------------AAATCA-TCG-------GAAAAT-TA---------AAGA----------------TGTTAAC-----ACTTATTCTATTA---TCTCCAGATATTTGCCTGTCATGAGCAAACGCATCGATATATTCTCCCCCAACAGCA
droWil2 scf2_1100000004511:11327037-11327208 - CTTGAAACAGAGTCTAATTATGTGAAATTGTTGGCTTCGATATGTGATGGGTAAGTGCTC-AACCT----AAACAATCAAATGAAC------------AGTGCA--------CGCAA----------------TGCTAAT-----ATTTGCATATTTATCATCTTTAGATATTTGCCGGCCATGAGCAAGCGCATCGACATATTCTCGCCCAACAGTA
dp5 XR_group8:1321047-1321217 - CTGGAGACGGAGGTCAACTACGTCAAGCTGCTGGCTGCCATTTGTGACGGGTAAGTGGGC-CTCGCTCTCG-------------------------TGATCAGAACTACTCTAACAC----------------CCCGA-----ACCCTGAACCTCCGACCCGCCACAGGTATCTGCCGGCCATGAGCAAGCGCATCGACATATTCTCGCCGAACAGCA
droPer2 scaffold_32:156000-156162 + CTGGAGACGGAGGTCAACTACGTCAAGCTGCTGGCTGCCATTTGCGACGGGTAAGTGGGC-CTCGCTCTCG-------------------------TGATAAGA--------ACTAC----------------CCTAACA-----CCCGGAACCCCGACCCGCCACAGGTATCTGCCGGCCATGAGCAAGCGCATCGACATATTCTCGCCGAACAGCA
droAna3 scaffold_13337:2265471-2265632 + CTGGAGACTGAGGTGAACTATGTCAAGCTGCTGGCCTCCATTTGCGATGGGTAAGTTGTG------------------GCAACT---A-------CCA-------------------AAT--CTTCTCGATGTTTCTATAA----CT---CTTCGGATTCCTTCACAGATATCTGCCAGCCATGAGCAAACGCATCGATATATTCTCGCCAAACAGTA
droBip1 scf7180000396390:114264-114425 + CTCGAAACTGAGGTGAACTATGTCAAGCTGCTGGCCTCCATCTGCGATGGGTAAGTTAAG------------------GCATCA-ACC-------ATACCCGTT---------------------TG--GCCTTTGTATAA----CCTT---TCATCCTCGTCTACAGATATCTGCCCGCCATGAGCAAGCGCATCGATATATTCTCGCCCAACAGTA
droKik1 scf7180000302510:857219-857389 + CTCGAAACGGAGGCCAACTATGTCAAGCTGCTGGCTGCCATTTGTGATGGGTAAGATAATATTCTCTTTCAAAAAATCGAATCGATCG-------GCAACC-C------------A---------------------------ACTTTATTCCTTATTCCCACTTTAGATATCTGCCGGCCATGAGCAAGCGCATCGACATATTCTCGCCAAACAGTA
droFic1 scf7180000454105:120922-121083 + CTTGATACGGAAGTCAATTATGTCAAACTCCTGGCAGCCATTTGTGATGGGTAAGAGTGG------------------AAATCG-ATG-------GAAAACGCT--------ATTAC----------------TTGTA------AGCTTACCTTGTGATCTGCTTTAGGTATCTGCCAGCCATGAGCAAGCGCATCGATATATTTTCGCCAAACAGTA
droEle1 scf7180000491249:85324-85486 + CTTGACACGGAGATCAATTATGTCAAACTGCTGGCATCCATTTGCGATGGGTAAGAGAAC------------------AAGTCG-TTG-------GCAATCGTC--------AGCAG----------------TTTTAAA-----ATTTGCATTCTGATTTGATTTAGGTATCTCCCTGCCATGAGCAAGCGCATCGATATATTCTCGCCAAACAGCA
droRho1 scf7180000777885:39476-39638 - CTCGATACGGAGGTTAATTATGTCAAACTGCTGGCATCTATTTGTGATGGGTAAGATAAC------------------GAGTCG-CTT-------GCAATTGGC--------AGCAG----------------TTGTAAA-----GTTTGCTTTCTGACCCGATTTAGGTATCTTCCTGCCATGAGCAAGCGCATCGATATATTCTCGCCAAGCAGTA
droBia1 scf7180000300910:39593-39745 - CTTGATACGGAGGTCAATTACGTTAAACTGCTGGCATCTATTTGCGATGGGTAAGA---C------------------TAGCT---GG-------GTTATTAC----------------------TA-----------GC-AGTTTTTTGATTTGTGACTCTTTTTAGGTATCTGCCTGCCATGAGCAAGCGCATCGATATATTCTCGCCGAACAGTA
droTak1 scf7180000415208:4575-4734 - CTCGATACGGAGGTCAATTACGTCAAACTGCTGGCATCCATTTGTGATGGGTAAGAGACC------------------GAGTCC-TGG----AGGACAATAGT----------------------TA-----------GC-ATT-TTTTAATTTGTGGTCCTCTTTAGGTATCTGCCAGCCATGAGCAAGCGCATCGATATATTCTCGCCGAACAGTA
droEug1 scf7180000409184:36052-36209 - CTTGATACGGAGGTCAACTATGTCAAACTGCTGGCAGCCATTTGTGATGGGTAAAGAACC------------------TAGTTA-GGG-------GCAATCGT----------------------GA-----------TC-AGATTTTAATTTTGTGTCCTACTTTAGGTACCTGCCAGCCATGAGCAAGCGCATCGATATATTCTCTCCAAATAGTA
dm3 chr3L:302252-302409 + CTTGATACGGAGGTCAATTATGTAAAGCTGCTAGCAGCCATTTGTGATGGGTAAGAGATC------------------AAGACC-TAA-------CCAGTCTT----------------------CA-----------GC-ACATATTTACTTTGTGACCCATTTTAGTTACCTGCCAGCTATGAGCAAGCGAATCGATATATTTTCGCCAAACAGTA
droSim2 3l:272766-272923 + CTTGATACGGAGGTCAATTACGTAAAGCTCCTAGCAGCCATTTGTGATGGGTAAGAAAAC------------------AAGTCT-TGA-------CCAATCTT----------------------CG-----------GC-ACATATTTACTTTGTGACCCATTTTAGGTACCTGCCAGCTATGAGCAAGCGCATCGATATATTTTCGCCAAACAGTA
droSec2 scaffold_2:333885-334042 + CTTGATACGGAGGTCAATTACGTAAAGCTGCTAGCAGCCATTTGTGATGGGTAAGAAAAC------------------AAGACC-TGA-------CCAATCTT----------------------CA-----------GC-ACATATTTACTTTGTGACCCATTTTAGGTACCTGCCAGCTATGAGCAAGCGCATCGATATATTTTCGCCAAACAGTA
droYak3 3L:281438-281595 + CTTGATACGGAGGTCAATTATGTAAAACTGCTGGCAGCCATTTGTGATGGGTAAGAGATC------------------GAGACT-GGA-------CCAATCGT----------------------CA-----------TC-ACATGCTTAATTTGTGTCCCATTTCAGGTACCTGCCAGCCATGAGCAAGCGCATCGATATATTTTCACCAAATAGTA
droEre2 scaffold_4784:294655-294810 + CTTGATACGGAGGTCAATTATGTAAAACTGCTGGCAGCCATTTGCGATGGGTAAGAGATC------------------GAGAA---GA-------TCCATCCT----------------------CA-----------GC-ACATGTTTAATTTGTGAACCATTTTAGGTACCTGCCAGCCATGAGCAAGCGCATCGACATATTTTCACCAAACAGTA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
CTCGAAACTGAAATTAATTACGTAAAGCTTCTCGCTTCGATTTGCGATGGGTAAGTAAAT-AACGCAATAG-----TCAAG--AAATACGCACAAAAAATA----------------ATT-------------------------------CATCTTTATTATTTTAGGTTTTTGCCTGCCATGAGCAAACGCATTGATATATTTTCTCCCAACAGCASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................................................................................................................................................................................CATTGATATATTTTCTCCCAACAGCA26168.00680058020000000000000000000010002000010003000000000000000000001000
...............AATTACGTAAAGCTTCTCGCTTCG...................................................................................................................................................................................24128.00280020010000000000000000000000000000000005200000000000000000000000
....................................................................TAG-----TCAAG--AAATACGCACAAAAAATA----------------AT...................................................................................................28123.00230012000000000000000000000040003000040000000000000000000000000000
...............AATTACGTAAAGCTTCTCGCTTCGATT................................................................................................................................................................................27115.00150014000000000000000000000010000000000000000000000000000000000000
......................................................................................................................TT-------------------------------CATCTTTATTATTTTAGGTTTTTGCC.........................................28113.00130012000000000000000000000000001000000000000000000000000000000000
...............AATTACGTAAAGCTTCTCGCTTCGA..................................................................................................................................................................................25111.00110011000000000000000000000000000000000000000000000000000000000000
....................................................................TAG-----TCAAG--AAATACGCACAAAAAATA----------------A....................................................................................................27111.0011007000000000000000000000020000000020000000000000000000000000000
................................................................................................................................................................................................CATTGATATATTTTCTCCCAACAG..24110.0010008000000000010000000000000000000000000100000000000000000000000
......................................................................................................................TT-------------------------------CATCTTTATTATTTTAGGTTTTTGC..........................................27110.0010005000000000000000000000010001000010002000000000000000000000000
...............AATTACGTAAAGCTTCTCGCTTC....................................................................................................................................................................................2319.009009000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................CATTGATATATTTTCTCCCAAC....2217.007007000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................CATTGATATATTTTCTCCCAACAGC.2517.007007000000000000000000000000000000000000000000000000000000000000
...............AATTACGTAAAGCTTCTCGCTTCGAT.................................................................................................................................................................................2617.007006000000000000000000000000000000000000100000000000000000000000
............................................................................................................................................................................................AACGCATTGATATATTTTCTCCCAACA...2717.007007000000000000000000000000000000000000000000000000000000000000
...............AATTACGTAAAGCTTCTCGC.......................................................................................................................................................................................2016.006001000000000010000001000000000000100002000000000000000000000000
................................................................................................................................................................................................CATTGATATATTTTCTCCCAACA...2316.006006000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TTGATATATTTTCTCCCAACAGCA2416.006005000000000000000000000000000000000001000000000000000000000000
.............TTAATTACGTAAAGCTTCTCGCTTC....................................................................................................................................................................................2515.005000000000000000000000000030002000000000000000000000000000000000
....................................................................TAG-----TCAAG--AAATACGCACAAAAAATA----------------.....................................................................................................2615.005003000000000000000000000010001000000000000000000000000000000000
................................................................................................................................................................................................CATTGATATATTTTCTCCCAA.....2115.005005000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................ATTGATATATTTTCTCCCAACAGCA2515.005005000000000000000000000000000000000000000000000000000000000000
....................................................................TAG-----TCAAG--AAATACGCACAAAAAATA----------------ATT-------------------------------...................................................................2915.005005000000000000000000000000000000000000000000000000000000000000
...............AATTACGTAAAGCTTCTCGCT......................................................................................................................................................................................2115.005001000001000000000000000000000000100002000000000000000000000000
....................................................................TAG-----TCAAG--AAATACGCACAAAAAAT......................................................................................................................2514.004002000000000000000000000000001000000001000000000000000000000000
.............TTAATTACGTAAAGCTTCTCGCTTCGA..................................................................................................................................................................................2714.004000000000000000000000000000001000030000000000000000000000000000
...............AATTACGTAAAGCTTCTCGCTT.....................................................................................................................................................................................2214.004003000000000000000000000000000000010000000000000000000000000000
....................................................................TAG-----TCAAG--AAATACGCACAAAA.........................................................................................................................2214.004000000000000000000000000010000000020001000000000000000000000000
................ATTACGTAAAGCTTCTCGCTTCG...................................................................................................................................................................................2314.004001000000000000000000000020000000000001000000000000000000000000
.................TTACGTAAAGCTTCTCGCTTCG...................................................................................................................................................................................2214.004000000000000000000000000000001000010002000000000000000000000000
.................................................................................................................................................................................................ATTGATATATTTTCTCCCAACA...2213.003003000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................T-------------------------------CATCTTTATTATTTTAGGTTTTTGCC.........................................2713.003002000000000000000000000000000000000000100000000000000000000000
....................................................................TAG-----TCAAG--AAATACGCACAAAAA........................................................................................................................2313.003001000000000000000000000010000000010000000000000000000000000000
............................................................................................................................................................................................AACGCATTGATATATTTTCTCCCAAC....2613.003003000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................AACGCATTGATATATTTTCTCCCAACAGC.2913.003003000000000000000000000000000000000000000000000000000000000000
...............AATTACGTAAAGCTTCTCG........................................................................................................................................................................................1913.003000020000000000000000000000000000000001000000000000000000000000
.................TTACGTAAAGCTTCTCGCTTCGATT................................................................................................................................................................................2513.003000000000000000000000000030000000000000000000000000000000000000
....................................................................TAG-----TCAAG--AAATACGCACAAAAAA.......................................................................................................................2413.003000000000000000000000000010001000010000000000000000000000000000
...................................................................................................................................................................................................TGATATATTTTCTCCCAACAGCA2313.003001000000000000000000000010001000000000000000000000000000000000
.............TTAATTACGTAAAGCTTCTCGCTTCG...................................................................................................................................................................................2613.003000000000000000000000000010000000020000000000000000000000000000
....................................................................TAG-----TCAAG--AAATACGCACAAA..........................................................................................................................2112.002001000000000000000000000000000000010000000000000000000000000000
.............TTAATTACGTAAAGCTTCTCGCTTCGATT................................................................................................................................................................................2912.002001000000000000000000000000000000010000000000000000000000000000
..........................................TGCGATGGGTAAGTAAAT-AACG.........................................................................................................................................................2212.002000000002000000000000000000000000000000000000000000000000000000
...............AATTACGTAAAGCTTCTCGCTTCGT..................................................................................................................................................................................2512.002002000000000000000000000000000000000000000000000000000000000000
......................................................................................................................TT-------------------------------CATCTTTATTATTTTAGGTTTTTG...........................................2612.002002000000000000000000000000000000000000000000000000000000000000
....................................................................TAG-----TCAAG--AAATACGCACAA...........................................................................................................................2012.002000000000000000000000000010000000000000100000000000000000000000
........................................TTTGCGATGGGTAAGTAAAT-AACGCAA......................................................................................................................................................2712.002000000000000000000000000000002000000000000000000000000000000000
...............AATTACGTAAAGCTTCTCGCTTCA...................................................................................................................................................................................2412.002002000000000000000000000000000000000000000000000000000000000000
................ATTACGTAAAGCTTCTCGCTT.....................................................................................................................................................................................2112.002002000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................ATTGATATATTTTCTCCCAACAG..2312.002002000000000000000000000000000000000000000000000000000000000000
................ATTACGTAAAGCTTCTCGCTTCGA..................................................................................................................................................................................2412.002002000000000000000000000000000000000000000000000000000000000000
....................................................................TAG-----TCAAG--AAATACGCACA............................................................................................................................1912.002000020000000000000000000000000000000000000000000000000000000000
.................TTACGTAAAGCTTCTCGCTTCGAT.................................................................................................................................................................................2412.002002000000000000000000000000000000000000000000000000000000000000
......................TAAAGCTTCTCGCTTCGATTTGCGA...........................................................................................................................................................................2512.002000000000000000000000000000000000000000200000000000000000000000
...............AATTACGTAAAGCTTCTCGCTTT....................................................................................................................................................................................2312.002000000000000000000000000000000000000001100000000000000000000000
...................................................................................................................................................................TTTAGGTTTTTGCCTGCCATGAGC...............................2412.002000000000000000000000000000000000000002000000000000000000000000
...GAAACTGAAATTAATTACGTAAAGCTT............................................................................................................................................................................................2711.001000000000000000000000000000001000000000000000000000000000000000
....................................................................TAG-----TCAAG--AAATACGCACAAAAAATA----------------AAA-------------------------------...................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
........TGAAATTAATTACGTAAAGCTTCTCGC.......................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.............................TCTCGCTTCGATTTGCGATGGGTAAG...................................................................................................................................................................2611.001000000000000000000000000000000000010000000000000000000000000000
.................TTACGTAAAGCTTCTCGCTTC....................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
......ACTGAAATTAATTACGTAAAGCTTC...........................................................................................................................................................................................2511.001000000000000000000000000010000000000000000000000000000000000000
......................................................................................................................................................................................................TATATTTTCTCCCAACAGC.1911.001001000000000000000000000000000000000000000000000000000000000000
.........................................TTGCGATGGGTAAGTAAAT-AACGCAATA....................................................................................................................................................2811.001000000000000000000000000000000000000000100000000000000000000000
...............AATTACGTAAAGCTTCTCGCTTTA...................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
............................TTCTCGCTTCGATTTGCGATGGGTAA....................................................................................................................................................................2611.001000001000000000000000000000000000000000000000000000000000000000
.................................................................CAATAG-----TCAAG--AAATACGCACAAA..........................................................................................................................2411.001000000000000000000000000000000000000001000000000000000000000000
...................................................................................................................................................................TTTAGGTTTTTGCCTGCCATGAGCAAAC...........................2811.001000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................TGCCATGAGCAAACGCATTGATATATC..............2711.001000000000000000000000000000001000000000000000000000000000000000
.................................................................................................................................................................................................ATTGATATATTTTCTCCCAAC....2111.001001000000000000000000000000000000000000000000000000000000000000
...GAAACTGAAATTAATTACGTAAAGCTTC...........................................................................................................................................................................................2811.001000000000000000000000000010000000000000000000000000000000000000
.............TTAATTACGTAAAGCTTCTCGCT......................................................................................................................................................................................2311.001000000000000000000000000010000000000000000000000000000000000000
................ATTACGTAAAGCTTCTCGCTTCGATT................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
....................................................................TAG-----TCAAG--AAATACGCACAAAAAATA----------------ATC-------------------------------...................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................CAAG--AAATACGCACAAAAAATA----------------ATC-------------------------------...................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................TTGCCTGCCATGAGCAAACGCATTGA....................2611.001000000000000000000000000000001000000000000000000000000000000000
...............AATTACGTAAAGCTTCTCGT.......................................................................................................................................................................................2011.001000000000000000000000000000000000000000100000000000000000000000
............................................................................................................................................................................................AACGCATTGATATATTTTCTCCCA......2411.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................TATTTTCTCCCAACAGCA1811.001001000000000000000000000000000000000000000000000000000000000000
.................TTACGTAAAGCTTCTCGCTTCGA..................................................................................................................................................................................2311.001000000000000000000000000000000000010000000000000000000000000000
...............AATTACGTAAAGCTTCTCGCTTCGATAA...............................................................................................................................................................................2811.001000010000000000000000000000000000000000000000000000000000000000
.................................................................CAATAG-----TCAAG--AAATACGCACAAAAAA.......................................................................................................................2711.001000000000000000000000000000000000000001000000000000000000000000
................ATTACGTAAAGCTTCTCGCT......................................................................................................................................................................................2011.001000000000000000000000000100000000000000000000000000000000000000
............ATTAATTACGTAAAGCTTCTC.........................................................................................................................................................................................2111.001000000000000000000000001000000000000000000000000000000000000000
....................................................................TAG-----TCAAG--AAATACGCACAAAAAATA----------------AA...................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
.........GAAATTAATTACGTAAAGCTTCTCGC.......................................................................................................................................................................................2611.001000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................ATTATTTTAGGTTTTTGCC.........................................1911.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................CATTGATATATTTTCTCCCAT.....2111.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................GCATTGATATATTTTCTCCCAACA...2411.001001000000000000000000000000000000000000000000000000000000000000
..................TACGTAAAGCTTCTCGCTTCGATTTGC.............................................................................................................................................................................2711.001000000000000000000000000000001000000000000000000000000000000000
....................................................................TAG-----TCAAG--AAATACGCACAATTT........................................................................................................................2311.001000000000000000000000000000000000000001000000000000000000000000
..............................................................................................................................................................................................CGCATTGATATATTTTCTCCCAACAGCA2811.001000000000000000000000000000000000000001000000000000000000000000
....................................................................................................................................................................................................GATATATTTTCTCCCAACAGCA2211.001001000000000000000000000000000000000000000000000000000000000000
...................................................................ATAG-----TCAAG--AAATACGCACAAAAAATC----------------.....................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................CCTGCCATGAGCAAACGCATTGATAT.................2611.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................CTTTATTATTTTAGGTTTTTGCC.........................................2311.001001000000000000000000000000000000000000000000000000000000000000
..................................CTTCGATTTGCGATGGGTAAG...................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
................................................................................................................................................................................................CATTGATATATTTTCTCCCAACAA..2411.001001000000000000000000000000000000000000000000000000000000000000
..............TAATTACGTAAAGCTTCTCGCTTCGA..................................................................................................................................................................................2611.001000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................CATTGATATATTTTCTCCC.......1911.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................ATCTTTATTATTTTAGGTTTTTGCC.........................................2511.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................CAAACGCATTGATATATTTTCTCCCAACA...2911.001001000000000000000000000000000000000000000000000000000000000000
.............TTAATTACGTAAAGCTTCTCG........................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................TTTTTGCCTGCCATGAGCAAACGCAT.......................2611.001000000000000000000000000000000000000001000000000000000000000000
....................................................................................................................................................................TTAGGTTTTTGCCTGCCATGAGCAAAC...........................2711.001000000000000000000000000000000000010000000000000000000000000000
................ATTACGTAAAGCTTCTCGCTTCT...................................................................................................................................................................................2311.001000000000000000000000000000000000000001000000000000000000000000
......................................................................................................................TT-------------------------------CATCTTTATTATTTTAGGTTTTT............................................2511.001001000000000000000000000000000000000000000000000000000000000000
...................................................................ATAG-----TCAAG--AAATACGCACAAAAAATA----------------.....................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................TGATATATTTTCTCCCAACAG..2111.001001000000000000000000000000000000000000000000000000000000000000
........TGAAATTAATTACGTAAAGCTC............................................................................................................................................................................................2211.001000000000000000000000000001000000000000000000000000000000000000
.......................AAAGCTTCTCGCTTCGATTTGCGATG.........................................................................................................................................................................2611.001000000001000000000000000000000000000000000000000000000000000000
................ATTACGTAAAGCTTCTCGCTTC....................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................CATTGATATATTTTCTCCCAACATT.2511.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................ATTGATATATTTTCTCCCAAT....2111.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................AG-----TCAAG--AAATACGCACAAAAAATA----------------A....................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
..................................................................AATAG-----TCAAG--AAATACGCACAAAAAA.......................................................................................................................2611.001000000000000000000000000000000000000001000000000000000000000000
.................TTACGTAAAGCTTCTCGCTT.....................................................................................................................................................................................2011.001000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................CGCATTGATATATTTTCTCC........2011.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................CGCATTGATATATTTTCTCCCAACAGC.2711.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................TGCCTGCCATGAGCAAACGCA........................2111.001000000000000000000000000100000000000000000000000000000000000000
...............................................................................................................................................................................................GCATTGATATATTTTCTCCCAACAGCA2711.001001000000000000000000000000000000000000000000000000000000000000
..................................................................AATAG-----TCAAG--AAATACGCACAAAAT........................................................................................................................2511.001000000000000000000000000000000000000001000000000000000000000000
..................................................................AATAG-----TCAAG--AAATACGCACAA...........................................................................................................................2211.001000000000000000000000000000000000000001000000000000000000000000
..................................................GTAAGTAAAT-AACGCAATAG-----TCAAA--.......................................................................................................................................2511.001000000000000000000000000000010000000000000000000000000000000000
................................................................................................................................................................................................CATTGATATATTTTCTCCCA......2011.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................CTGCCATGAGCAAACGCATT......................2011.001000000000000000000000000000000000000001000000000000000000000000
...............................................................................................................................................................................................GCATTGATATATTTTCTCCCAAC....2311.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................AAG--AAATACGCACAAAAAATA----------------A....................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
....................................................................TAG-----TCAAG--AAATACGCCA.............................................................................................................................1860.171000000000000000000000000000000000000001000000000000000000000000
droMoj3
TTAGAAACCGAAGTCAATTACGTAAAGCTGCTGGCTTCAATTTGCGACGGGTAAGCATTG------------------ACTTTG-TGC-------TCAATGATA-------------AATGATCTCTAATTGA------------TTTT---GTAATTATTTCTATAGGTATCTGCCTGCCATGAGCAAGCGCATCGATATATTTTCGCCGAACAGCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................................................................................................................................................................GCGCATCGATATATTTTCGCCGAACAGC.2811.001100000
droGri2
CTCGAAACTGAAGTCAATTACGTAAAGCTTCTGGCTGCCATTTGTGATGGGTAATAAATC------------------AAATCA-TCG-------GAAAAT-TA---------AAGA----------------TGTTAAC-----ACTTATTCTATTA---TCTCCAGATATTTGCCTGTCATGAGCAAACGCATCGATATATTCTCCCCCAACAGCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
CTTGAAACAGAGTCTAATTATGTGAAATTGTTGGCTTCGATATGTGATGGGTAAGTGCTC-AACCT----AAACAATCAAATGAAC------------AGTGCA--------CGCAA----------------TGCTAAT-----ATTTGCATATTTATCATCTTTAGATATTTGCCGGCCATGAGCAAGCGCATCGACATATTCTCGCCCAACAGTASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........AGAGTCTAATTATGTGAAATTGTT..........................................................................................................................................................................................2411.00100100
......................TGAAATTGTTGGCTTCGATATGTGA...........................................................................................................................................................................2511.00100100
dp5
CTGGAGACGGAGGTCAACTACGTCAAGCTGCTGGCTGCCATTTGTGACGGGTAAGTGGGC-CTCGCTCTCG-------------------------TGATCAGAACTACTCTAACAC----------------CCCGA-----ACCCTGAACCTCCGACCCGCCACAGGTATCTGCCGGCCATGAGCAAGCGCATCGACATATTCTCGCCGAACAGCASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............CAACTACGTCAAGCTGCTGGC.......................................................................................................................................................................................2112.0020100010000
................................GGCTGCCATTTGTGACGGGT......................................................................................................................................................................2011.0010100000000
...............AACTACGTCAAGCTGCTGGC.......................................................................................................................................................................................2011.0010100000000
.................................................................................................................................................................................GGCCATGAGCAAGCGCATCGA....................2120.5010100000000
.............................................................................................................................................................................TGCCGGCCATGAGCAAGCGCATCGACA..................2720.5010100000000
....................................................................................................................................................................................................GACATATTCTCGCCGAACAG..2020.5010100000000
...............................................................................................................................................................................................GCATCGACATATTCTCGCCGAAC....2320.5010100000000
...............................................................................................................................................................................................GCATCGACATATTCTCGCCGAACAGC.2620.5010010000000
........................................................................................................................................................................GTATCTGCCGGCCATGAGCAAGCGC.........................2520.5010100000000
CTGGAGACGGAGGTCAACTA......................................................................................................................................................................................................2020.5010100000000
................................................................................................................................................................................................CATCGACATATTCTCGCC........1820.5010100000000
droPer2
CTGGAGACGGAGGTCAACTACGTCAAGCTGCTGGCTGCCATTTGCGACGGGTAAGTGGGC-CTCGCTCTCG-------------------------TGATAAGA--------ACTAC----------------CCTAACA-----CCCGGAACCCCGACCCGCCACAGGTATCTGCCGGCCATGAGCAAGCGCATCGACATATTCTCGCCGAACAGCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............CAACTACGTCAAGCTGCT..........................................................................................................................................................................................1812.002200000
.................CTACGTCAAGCTGCTGGCTGCCA..................................................................................................................................................................................2312.002200000
....................................................................................................................................................................................................GACATATTCTCGCCGAAC....1812.002200000
...........................................................................................................................................................................................AAGCGCATCGACATATTCTCGCC........2312.002200000
..............CAACTACGTCAAGCTGCTGGCT......................................................................................................................................................................................2211.001100000
...............AACTACGTCAAGCTGCTGGCTGCC...................................................................................................................................................................................2411.001100000
droAna3
CTGGAGACTGAGGTGAACTATGTCAAGCTGCTGGCCTCCATTTGCGATGGGTAAGTTGTG------------------GCAACT---A-------CCA-------------------AAT--CTTCTCGATGTTTCTATAA----CT---CTTCGGATTCCTTCACAGATATCTGCCAGCCATGAGCAAACGCATCGATATATTCTCGCCAAACAGTASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....GACTGAGGTGAACTATGT...................................................................................................................................................................................................1811.001010000
...................ATGTCAAGCTGCTGGCCTCCA..................................................................................................................................................................................2111.001100000
.....................GTCAAGCTGCTGGCCTCC...................................................................................................................................................................................1811.001100000
droBip1
CTCGAAACTGAGGTGAACTATGTCAAGCTGCTGGCCTCCATCTGCGATGGGTAAGTTAAG------------------GCATCA-ACC-------ATACCCGTT---------------------TG--GCCTTTGTATAA----CCTT---TCATCCTCGTCTACAGATATCTGCCCGCCATGAGCAAGCGCATCGATATATTCTCGCCCAACAGTASizeHit CountTotal NormTotal
No Reads
droKik1
CTCGAAACGGAGGCCAACTATGTCAAGCTGCTGGCTGCCATTTGTGATGGGTAAGATAATATTCTCTTTCAAAAAATCGAATCGATCG-------GCAACC-C------------A---------------------------ACTTTATTCCTTATTCCCACTTTAGATATCTGCCGGCCATGAGCAAGCGCATCGACATATTCTCGCCAAACAGTASizeHit CountTotal NormTotal
No Reads
droFic1
CTTGATACGGAAGTCAATTATGTCAAACTCCTGGCAGCCATTTGTGATGGGTAAGAGTGG------------------AAATCG-ATG-------GAAAACGCT--------ATTAC----------------TTGTA------AGCTTACCTTGTGATCTGCTTTAGGTATCTGCCAGCCATGAGCAAGCGCATCGATATATTTTCGCCAAACAGTASizeHit CountTotal NormTotal
No Reads
droEle1
CTTGACACGGAGATCAATTATGTCAAACTGCTGGCATCCATTTGCGATGGGTAAGAGAAC------------------AAGTCG-TTG-------GCAATCGTC--------AGCAG----------------TTTTAAA-----ATTTGCATTCTGATTTGATTTAGGTATCTCCCTGCCATGAGCAAGCGCATCGATATATTCTCGCCAAACAGCASizeHit CountTotal NormTotal
No Reads
droRho1
CTCGATACGGAGGTTAATTATGTCAAACTGCTGGCATCTATTTGTGATGGGTAAGATAAC------------------GAGTCG-CTT-------GCAATTGGC--------AGCAG----------------TTGTAAA-----GTTTGCTTTCTGACCCGATTTAGGTATCTTCCTGCCATGAGCAAGCGCATCGATATATTCTCGCCAAGCAGTASizeHit CountTotal NormTotal
No Reads
droBia1
CTTGATACGGAGGTCAATTACGTTAAACTGCTGGCATCTATTTGCGATGGGTAAGA---C------------------TAGCT---GG-------GTTATTAC----------------------TA-----------GC-AGTTTTTTGATTTGTGACTCTTTTTAGGTATCTGCCTGCCATGAGCAAGCGCATCGATATATTCTCGCCGAACAGTASizeHit CountTotal NormTotal
No Reads
droTak1
CTCGATACGGAGGTCAATTACGTCAAACTGCTGGCATCCATTTGTGATGGGTAAGAGACC------------------GAGTCC-TGG----AGGACAATAGT----------------------TA-----------GC-ATT-TTTTAATTTGTGGTCCTCTTTAGGTATCTGCCAGCCATGAGCAAGCGCATCGATATATTCTCGCCGAACAGTASizeHit CountTotal NormTotal
No Reads
droEug1
CTTGATACGGAGGTCAACTATGTCAAACTGCTGGCAGCCATTTGTGATGGGTAAAGAACC------------------TAGTTA-GGG-------GCAATCGT----------------------GA-----------TC-AGATTTTAATTTTGTGTCCTACTTTAGGTACCTGCCAGCCATGAGCAAGCGCATCGATATATTCTCTCCAAATAGTASizeHit CountTotal NormTotal
No Reads
dm3
CTTGATACGGAGGTCAATTATGTAAAGCTGCTAGCAGCCATTTGTGATGGGTAAGAGATC------------------AAGACC-TAA-------CCAGTCTT----------------------CA-----------GC-ACATATTTACTTTGTGACCCATTTTAGTTACCTGCCAGCTATGAGCAAGCGAATCGATATATTTTCGCCAAACAGTASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................................................................................................................................................AATCGATATATTTTCGCCA.......1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TACGGAGGTCAATTATGTAAAGCTGC...........................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TACGGAGGTCAATTATGTAAAGCT.............................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................CCTGCCAGCTATGAGCAAGCGA.........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TGCTAGCAGCCATTTGTGATGGGT......................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................CAGCTATGAGCAAGCGAATCGATATAT...............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................AGCAGCCATTTGTGATGGGTA.....................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
....ATACGGAGGTCAATTATGTAAAGCT.............................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.........GAGGTCAATTATGTAAAGCT.............................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................AGCTATGAGCAAGCGAATC......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.........................................................................................................................................................................TACCTGCCAGCTATGAGCAAG............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...............................TAGCAGCCATTTGTGATGGGTACCT..................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..........................................TGTGATGGGTAAGAGATC------------------AAG.........................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
................................................................................................................................................................................CAGCTATGAGCAAGCGAATCGAT...................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TGATACGGAGGTCAATTATGTAAAGC..............................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................GCTAGCAGCCATTTGTGATGGGTACC...................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................CTGCCAGCTATGAGCAAGCG..........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............AATTATGTAAAGCTGCTAGCAGCC...................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................TATGAGCAAGCGAATCGATATATTTT............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................TTTGTGATGGGTAAGAGATC------------------A...........................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
....ATACGGAGGTCAATTATGTAAAGCTGC...........................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
droSim2
CTTGATACGGAGGTCAATTACGTAAAGCTCCTAGCAGCCATTTGTGATGGGTAAGAAAAC------------------AAGTCT-TGA-------CCAATCTT----------------------CG-----------GC-ACATATTTACTTTGTGACCCATTTTAGGTACCTGCCAGCTATGAGCAAGCGCATCGATATATTTTCGCCAAACAGTASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................................................................................................................................................................................................ATATTTTCGCCAAACAGT.1812.00200200000000000000
.....TACGGAGGTCAATTACGTAAAGCTC............................................................................................................................................................................................2511.00100000000001000000
.......................................................................................................................................................................................................ATATTTTCGCCAAACAGG.1820.50100100000000000000
droSec2
CTTGATACGGAGGTCAATTACGTAAAGCTGCTAGCAGCCATTTGTGATGGGTAAGAAAAC------------------AAGACC-TGA-------CCAATCTT----------------------CA-----------GC-ACATATTTACTTTGTGACCCATTTTAGGTACCTGCCAGCTATGAGCAAGCGCATCGATATATTTTCGCCAAACAGTASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
CTTGATACGGAGGTCAATTATGTAAAACTGCTGGCAGCCATTTGTGATGGGTAAGAGATC------------------GAGACT-GGA-------CCAATCGT----------------------CA-----------TC-ACATGCTTAATTTGTGTCCCATTTCAGGTACCTGCCAGCCATGAGCAAGCGCATCGATATATTTTCACCAAATAGTASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................................GTAAGAGATC------------------GAGACT-GGA-------CC.........................................................................................................................2111.00110000000000
..................................................................................................................................................CTTAATTTGTGTCCCATTTCAG..................................................2211.00110000000000
droEre2
CTTGATACGGAGGTCAATTATGTAAAACTGCTGGCAGCCATTTGCGATGGGTAAGAGATC------------------GAGAA---GA-------TCCATCCT----------------------CA-----------GC-ACATGTTTAATTTGTGAACCATTTTAGGTACCTGCCAGCCATGAGCAAGCGCATCGACATATTTTCACCAAACAGTASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................................................................................................CATGAGCAAGCGCATCGACAT.................2111.0011000000

Generated: 05/19/2015 at 10:48 AM