ID:

dvi_6264

 Coordinate:

scaffold_12875:11923469-11923524 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [Dvir\GJ21881-cds]; exon [dvir_GLEANR_7207:8]; exon [dvir_GLEANR_7207:9]; CDS [Dvir\GJ21881-cds]; intron [Dvir\GJ21881-in]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------##################################################
CTCTATCTTTCACGCTTCACTTTGTCATTCTATATGTTGATGTCCTCTCTGTAAGTAATTATTCTAGATACTAAGTATAAGGCACTTAAATCCTGTATATTTGCAGGCCGTCTTCCAAGTGACACCGTTGTCTGCAGAGGAATGGATAACTGTGAT
**************************************************.............((......(((((((((((.........))).)))))))).))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060676
9xArg_ovaries_total
 M047
female body
 SRR060667
160_females_carcasses_total
 SRR060677
Argx9_ovaries_total
 GSM1528803
follicle cells		 M061
embryo
 SRR060675
140x9_ovaries_total
 M028
head
 V053
head
 SRR060674
9x140_ovaries_total
 V116
male body		 SRR060672
9x160_females_carcasses_total
 SRR060660
Argentina_ovaries_total
 SRR060663
160_0-2h_embryos_total
 SRR060668
160x9_males_carcasses_total
 SRR060671
9x160_males_carcasses_total
 SRR060681
Argx9_testes_total
 V047
embryo
 SRR060669
160x9_females_carcasses_total
 SRR060654
160x9_ovaries_total
 SRR060656
9x160_ovaries_total
 SRR060664
9_males_carcasses_total
 SRR060673
9_ovaries_total
 SRR060678
9x140_testes_total
 SRR060683
160_testes_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060688
160_ovaries_total
 SRR060662
9x160_0-2h_embryos_total
 SRR060666
160_males_carcasses_total
 M027
male body		 SRR060655
9x160_testes_total
 SRR060659
Argentina_testes_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060670
9_testes_total
 SRR060679
140x9_testes_total
 SRR060680
 9xArg_testes_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060687
9_0-2h_embryos_total
................................................................................................................................TGTCTGCAGAGGAATGGATAACTGTGA. 27 0 1 6.00 6 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................TGACACCGTTGTCTGCAGAGGAATGGA.......... 27 0 1 5.00 5 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TCTGCCGTCTTCCAAGTGACACCGTT........................... 26 3 1 5.00 5 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................TGTCTGCAGAGGAATGGATAACTGT... 25 0 1 4.00 4 0 0 0 1 0 0 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................GTTGTCTGCAGAGGAATGGATAACT..... 25 0 1 4.00 4 0 1 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................TCTGCAGAGGAATGGATAACTGTGA. 25 0 1 3.00 3 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TGCCGTCTTCCAAGTGACACCGTTGTCT....................... 28 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TGCCGTCTTCCAAGTGACACCGTTGTC........................ 27 1 1 3.00 3 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TCTGCCGTCTTCCAAGTGACACCGTTG.......................... 27 3 1 3.00 3 1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................TCTGCAGAGGAATGGATAACTGTG.. 24 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...................................................................................................................................CTGCAGAGGAATGGATAACTGTGAT 25 0 1 2.00 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................GTTGTCTGCAGAGGAATGGATA........ 22 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................CACTTTGTCATTCTATATGTTGATGTCC............................................................................................................... 28 0 1 2.00 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................GTCTGCAGAGGAATGGATAACTGT... 24 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................GGAATGGATAACTGTGAT 18 0 1 2.00 2 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................CTGCAGAGGAATGGATAACTGT... 22 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................ATTCTATATGTTGATGTCCTCTCTGCC....................................................................................................... 27 2 1 2.00 2 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................TGTCTGCAGAGGAATGGATAACTG.... 24 0 1 2.00 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................TGACACCGTTGTCTGCAGAGGAATGGAA......... 28 1 1 2.00 2 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................TTCCAAGTGACACCGTTGTCTGCAGA.................. 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................TCCAAGTGACACCGTTGTCTGCAGAG................. 26 0 1 2.00 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......CTTTCACGCTTCACTTTGTCATTCTA............................................................................................................................ 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.....................................................................................................................................GCAGAGGAATGGATAACT..... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................GTTGTCTGCAGAGGAATGGATAA....... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................TTTGTCATTCTATATGTTGATGTCC............................................................................................................... 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
CTCTATCTTTCACGCTTCACTTTGTCA................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................TCACTTTGTCATTCTATATGTTTAT................................................................................................................... 25 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........ACGCTTCACTTTGTCATTCT............................................................................................................................. 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................GTTGTCTGCAGAGGAATCGATA........ 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................TCCAAGTGACACCGTTGTCTTCAGAGGA............... 28 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................TTCTATATGTTGATGTCCTCTCTGCCG...................................................................................................... 27 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...............TTCACTTTGTCATTCTATAT......................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......TTTCACGCTTCACTTTGTCATT............................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................TGACACCGTTGTCTGCAGAGGAATGGAT......... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................TCATTCTATATGTTGATGTCCTCTCTGC........................................................................................................ 28 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................ACCGTTGTCTGCAGAGGAATGGATAACT..... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....TCTTTCACGCTTCACTTTGTCATTC.............................................................................................................................. 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........CACGCTTCACTTTGTCAT................................................................................................................................ 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TCTGCCGTCTTCCAAGTGACACCGTTGTC........................ 29 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TCTGCCGTCTTCCAAGTGACACCGT............................ 25 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................GACACCGTTGTCTGCAGAGGA............... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TGCCGTCTTCCAAGTGACACCGT............................ 23 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............CTTCACTTTGTCATTCTAT........................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................CTTCCAAGTGACACCGTTGT......................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................TCCAAGTGACACCGTTGTCTGCAGAGG................ 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................AGAGGAATGGATAACTGT... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GTCTTCCAAGTGACACCGT............................ 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....ATCTTTCACGCTTCACTTTGT................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.................................................................................................................TCCAAGTGATACCGTTGTCTGCAGAGGC............... 28 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............CTTCACTTTGTCATTCTATATGTT...................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................GAGGAATGGATAACTGTGAT 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TGCCGTCTTCCAAGGGACACCGTTGTCT....................... 28 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............CTTCACTTTGTCATTCTATATG........................................................................................................................ 22 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................AAGTGACACCGTTGTCTGCA.................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
...............................ATATGTTGATGTCCTCTCTGCC....................................................................................................... 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................CACCGTTGTCTGCAGAGGAG.............. 20 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................GTCTGCAGAGGAATGGATAACTG.... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................CTATATGTTGATGTCCTCTCTGCC....................................................................................................... 24 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GTCTTCCAAGTGACACCGTT........................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................AGTGACACCGTTGTCTGCAGAGGAAT............. 26 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................GACACCGTTGTCTGCAGAGGAATGGAT......... 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................GTTGTCTGCAGAGGAATGGAT......... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................TGGCTGCAGAGGAATGGA.......... 18 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................GCAGAGGAATGGATAACTGTGAT 23 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................TCCAAGTGACACCGTTGTCT....................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....TCTTTCACGCTTCACTTTTTCATTCT............................................................................................................................. 26 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................CACCGTTGTCTGCAGAGGA............... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
....................................................................................................................AAGTGACACCGTTGTCTGC..................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.................................................................................................................................GTCTGCAGAGGAATGGATAACTGTGA. 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................GTTGTCTGCAGAGGAATGGATAACTGT... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CGTTGTCTGCAGAGGAATG............ 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................ATATGTTGATGTCCTCTCT.......................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................TATGTTGATGTCCTCTCTGCC....................................................................................................... 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................GAGGAATGGATAAATGTG.. 18 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................TCCAAGTGACACCGTTGTCTGCAGAGGA............... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................ACACCGTTGTCTGCAGAGGA............... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................CACCGTTGTCTGCAGAGGAATGGA.......... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................CACCGTTGTCTGCAGAGGAATGGATAAC...... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................ACTTTGTCATTCTATATGTT...................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................GCCGTCTTCCAAGTGACACCGTTGTCT....................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................TCACTTTGTCATTCTATATGTTGATG.................................................................................................................. 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................GTCTGCAGAGGAATGGAAAACTGTGA. 26 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................TCTATATGTTGATGT................................................................................................................. 15 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................AGGCCGTCTTCCAAGGGAC................................. 19 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................TGTCTGCAGAGGAATGGA.......... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....TCTTTCACGCTTCACTTTGTCATTCTA............................................................................................................................ 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................TTCCAAGTGACACCGTTGTCTGCAGAG................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...TATCTTTCACGCTTCACTTTGTCAT................................................................................................................................ 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................CACCGTTGTCTGCAGAGGAATGG........... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................ATTGTCTGCAGAGGAATG............ 18 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......TTTCACGCTTCACTTTGTCATTCT............................................................................................................................. 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................CTGCAGAGGAATGGATAAC...... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................GACACCGTTGTCTGCAGAGGAATG............ 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................GACACCGTTGTCTGCAGA.................. 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................TTGTCTGCAGAGGAATGGATAACTGTG.. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......TTTCACGCTTCACTTTGTCATTCTAT........................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................ACCGTTGTCTGCAGAGGAATGGATAAC...... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GTGTTCCAGGTGACAACGTT........................... 20 3 7 0.57 4 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................GGGGAAAGGATAACTGTGGT 20 3 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................GTTGATGTCCTCTCTGCC....................................................................................................... 18 2 14 0.29 4 0 1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................TGGAATGGACAACTGTGA. 18 2 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................TCTTTGGCATTCTAGATGTTG..................................................................................................................... 21 3 10 0.10 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................CTCTGTAAATAAATATTCT........................................................................................... 19 2 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................TGTTCCAGGTGACAACGTT........................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

GAGATAGAAAGTGCGAAGTGAAACAGTAAGATATACAACTACAGGAGAGACATTCATTAATAAGATCTATGATTCATATTCCGTGAATTTAGGACATATAAACGTCCGGCAGAAGGTTCACTGTGGCAACAGACGTCTCCTTACCTATTGACACTA
**************************************************.............((......(((((((((((.........))).)))))))).))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M028
head
 SRR060677
Argx9_ovaries_total
...................................................................................................AAACGTCCGGCAGGAGGTTCA.................................... 21 1 1 1.00 1 1 0
..........................................................AAAAAGATCTATGATTGCTATT............................................................................ 22 3 8 0.13 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12875:11923419-11923574 + dvi_6264 CTCTATCTTTCACGCTTCACTTTGTCATTCTATATGTTGATGTCCTCTCTGTAAGTAAT--TATTCTAGAT---------A--CTAAGTATAAGG--CA-------------------------------------------CTT-----------------------------------------------------AAA---------------------------------TCC--------TGTA-------TA--TT-TGCAGGCCGTCTTCCAAGTGACACCGTTGTCTGCAGAGGAATGGATAACTGTGAT
droMoj3 scaffold_6496:14924753-14924931 + CACTTTCTTTCACTCTTCACTTTGTCATTCTATACGTTGAAGTCCTCTCTGTAAGTAGA-----T---C-------TAAAA--ATTAGCAA----------------------------------A-----AA-------------------GCA--------------A--------------------TC----ATGATATAATTCTATGTGAAATTGTTTTCT---------AAT-----CTAT---------TT--TA-TTTAGACCGTTTTCCAAGTAACACCGTTGTCTGCGGAGGAATGGATAACTGTGAT
droGri2 scaffold_15245:11782850-11783015 - CCCTTTCTTTCACTCTTCACTTTGTTATTCTATATGTTGAAGTCCTCTCCGTAAGTGAA--AGTC---TAT---------A--TTTAACAA----------------------------------C-------------TGC------CTTTGCC--------------A--------------------TG----ATAAT---------------------------------AGCATTGA--ATATA-------TA--TT-TATAGACCGTCTTCCAAGTGACACCGTTGTCTACAGAGGAATGGATAACTGTGAT
droWil2 scf2_1100000004514:1167786-1168006 + CACTTTCCTTCACTCTTCACTTTGTTATTCTTTATGTGGATGTCCTCTCTGTAAGTACT--AAT------------------------TACAGGC--AACTTAACTATGATTAACGCCAAAACTCT-T--------------------CCAATTC--AATTAAACTAAA------------TTCT-----GTTTCT------CTGTTCTGCGTGTTTGTGTCT-----------TCTATTCA--TTTTT-------TT--TC-TTTAGACCGTCTTCCAAGTGACACCGTTGTCTGCAGAGGAATGGATAACTGTGAT
dp5 3:1758509-1758678 - CACTTTCCTTCACTCTTCACTTCGTTATTCTTTACGTTGACGTCCTCTCCGTAAGTATC--AAA------------------TTTAAG------CGG----------------------------GATATGTTCACGCA---ACTAAA---------------------------------TTTT-----TGAACTC----------------------------TACA---------------TCTTC-------CA--TC-TATAGACCGTCTTCCAAGTGACACCGTTGTCTGCAGAGGAATGGATAACTGTGAT
droPer2 scaffold_2:1946107-1946276 - CACTTTCCTTCACTCTTCACTTCGTTATTCTTTACGTTGACGTCCTCTCCGTAAGTATC--AAA------------------TTTAAG------CGG----------------------------GATATGTTCACGCA---ACTAAA---------------------------------TTTT-----TGAACTC----------------------------TACA---------------TCTTC-------CA--TC-TATAGACCGTCTTCCAAGTGACACCGTTGTCTGCAGAGGAATGGATAACTGTGAT
droAna3 scaffold_13266:5681465-5681627 - CACTCTCCTTCACTCTTCACTTTGTTATTCTTTACGTCGATGTCCTCTCCGTGAGTACT--CCCT---TACCTAT-----A--AT---TTC------------------------------------------------TGA------TTGCGAA--------------T------------------------AGATAATAAT------------------------------TTAT--------ATA-------TT--TT-ATTAGACCGTCTTCCAAGTGACACCGTTGTCTGCAGAGGAATGGATAACTGTGAT
droBip1 scf7180000396372:295919-296086 - CACTCTCCTTCACTCTTCACTTTGTTATTCTTTACGTCGATGTCCTCTCCGTAAGTATCCCCGGC---GAT---------A--AT---------------------------------------------------------------TTACGAT--------------T--------------------AAGAAGATAAT---------------------------------CGAA------TGTTTAATTTATTACCCACCTTAGACCGTCTTCCAAGTGACACCGTTGTCTGCAGAGGAATGGATAACTGTGAT
droKik1 scf7180000302355:399359-399530 - CACTCTCCTTTACTCTTCACTTTGTTATTCTTTACGTCGATGTCCTCTCCGTAAGTACC--GAT----AAC----GTACCGATATAAGCCT----------------------------------T-C------------------------ACGAG------------G---AATGCTAATCCT-----TGTAATC----------------------------T-------------------CATC-------CT--TT-CTTAGACCGTCTTCCAAGTGACACCGTTGTCTGCTGAGGAATGGATAACTGTGAT
droFic1 scf7180000453858:1553804-1553963 - CACTCTCCTTCACTCTTCACTTTGTTATTCTTTACGTCGATGTCCTCTCCGTAAGTGCA--AGGC---GAT---------T--AGA------------------------------------------------------------------GCC--------------TCGT------------TTTTCAAAAAGCTAAC---------------------------------TTCGTTG--------------TCG--TC-CACAGACCGTCTTCCAAGTGACACCGTTGTCTGCAGAGGAATGGATAACTGTGAT
droEle1 scf7180000491214:5268199-5268377 + CACTATCCTTCACTCTTCACTTTGTTATTCTTTACGTCGATGTCCTCTCCGTAAGTATC--AGTT---G-------TATAAATATA-----------------------------------------TATATATATATA---GATATA---------------------------------TTAA-----TGTATAT----------------------------TATGCTTACCTTGTTA--------------TAT--TT-TATAGACCGTCTTCCAAGTGACACCGTTGTCTGCTGAGGAATGGATAACTGTGAT
droRho1 scf7180000777217:14005-14167 + CACTCTCCTTCACTCTTCACTTTGTTATTCTTTACGTCGATGTCCTCTCCGTAAGTAAC--AGGC---GA--------------TAAGCAC----------------------------------T-T--------------------GTACAT-------------------------------ATTTCCAAATACTAAC---------------------------------CTAATTA--------------TCT--CA-CACAGACCGTCTTCCAAGTGACACCGTTGTCTGCAGAGGAATGGATAACTGTGAT
droBia1 scf7180000302143:342189-342352 - CACTCTCCTTCACTCTTCACTTTGTTATTCTTTACGTCGATGTCCTCTCCGTAAGTATC--AGGC---TAT---------C--ATAATGCC------------------------------------------------TGT------TTGAGCA--------------G----------------------AGAGCTAAC---------------------------------CCAATTA--------------TCCTCCC-CACAGACCGTCTTCCAAGTGACACCGTTGTCTGCAGAGGAATGGATAACTGTGAT
droTak1 scf7180000415878:936840-937014 - CACTCTCCTTCACTCTTCACTTTGTTATTCTTTACGTCGATGTCCTCTCCGTAAGTACC--CGGC---GAT---------A--CCAAGTG--------AC---------------------------------------TTT------CTA-ACA--------------A--------------------AGAAAGCTAAT---------------------------------CCCC-----CGATCTTATCTATCCCCCA-CACAGACCGTCTTCCAAGTGACACCGTTGTCTGCTGAGGAATGGATAACTGTGAT
droEug1 scf7180000409464:189992-190154 - CACTCTCCTTCACTCTTCACTTTGTTATTCTTTACGTCGATGTCCTCTCCGTAAGTACC--AGAC---GAC---------G--ATAGGCAT----------------------------------T-T--------------------GTCTCCT--------------T--------------------CGAAAGCTAAC---------------------------------TCGATTA--------------TCC--CC-TACAGACCGTCTTCCAAGTGACACCGTTGTCTGCAGAGGAATGGATAACTGTGAT
dm3 chr2R:19816905-19817072 - CACTCTCCTTCACTCTTCACTTTGTTATTCTTTACGTCGATGTCCTCTCCGTAAGTATT--TGGC---AAT---------G--ATAAGCCC----------------------------------T-T--------------------CTGCGCC--------------G--------------------CGGAAACTAAT---------------------------------GCCAGTAT--CGTTT-------TA--CC-CACAGACCGTCTTCCAAGTGACACCGTTGTCTGCAGAAGAATGGATAACTGTGAT
droSim2 2r:20317705-20317872 - dsi_6717 CACTCTCCTTCACTCTTCACTTTGTTATTCTTTACGTCGATGTCCTCTCCGTAAGTATT--AGGC---AAC---------G--ATAAGCCT----------------------------------T-T--------------------CTGCGCC--------------G--------------------CGGAAACTAAT---------------------------------GCCAGTAA--CGTTT-------TA--CC-CACAGACCGTCTTCCAAGTGACACCGTTGTCTGCAGAAGAATGGATAACTGTGAT
droSec2 scaffold_9:3100879-3101046 - CACTCTCCTTCACTCTTCACTTTGTTATTCTTTACGTCGATGTCCTCTCCGTAAGTATT--AGGC---AAT---------G--ATAAGCCC----------------------------------T-T--------------------CTGCGCC--------------G--------------------CGGAAACTAAT---------------------------------GCCAGTAA--CGTTT-------TA--CC-CACAGACCGTCTTCCAAGTGACACCGTTGTCTGCAGAAGAATGGATAACTGTGAT
droYak3 2R:19794437-19794605 - CACTCTCCTTCACTCTTCACTTTGTTATTCTTTACGTCGATGTCCTCTCCGTAAGTATC--GAGC---GAT---------G--ATAAGCCC----------------------------------T-T--------------------CTGCGCC--------------T--------------------CGGAAACTAAC---------------------------------CCAG-CCACCCGTTT-------TA--CT-TACAGACCGTCTTCCAAGTGACACCGTTGTCTGCAGAAGAATGGATAACTGTGAT
droEre2 scaffold_4845:21189661-21189830 - CACTCTCCTTCACTCTTCACTTTGTTATTCTTTACGTCGATGTCCTCTCCGTAAGTATC--GGGC---GAT---------G--ATAAGCCCTCGG--AA-------------------------------------------AGTAA-----GCC--------------C--------------------CGGAAACTAAC---------------------------------CCAC-----CCGTTT-------TA--CC-CACAGACCGTCTTCCAAGTGACACCGTTGTCTGCAGAAGAATGGATAACTGTGAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
CTCTATCTTTCACGCTTCACTTTGTCATTCTATATGTTGATGTCCTCTCTGTAAGTAAT--TATTCTAGAT---------A--CTAAGTATAAGG--CA-------------------------------------------CTT-----------------------------------------------------AAA---------------------------------TCC--------TGTA-------TA--TT-TGCAGGCCGTCTTCCAAGTGACACCGTTGTCTGCAGAGGAATGGATAACTGTGATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................................................................................................................................................................................................................................................................................TGTCTGCAGAGGAATGGATAACTGTGA.2716.006000001000010000000000001010100000000001000000000000000000000000
.........................................................................................................................................................................................................................................................................................TGACACCGTTGTCTGCAGAGGAATGGA..........2715.005001000000000000000000000002100010000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................TGTCTGCAGAGGAATGGATAACTGT...2514.004000000000010000000000000200100000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................GTTGTCTGCAGAGGAATGGATAACT.....2514.004031000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................TCTGCAGAGGAATGGATAACTGTGA.2513.003000000100000000000000000101000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................TCTGCAGAGGAATGGATAACTGTG..2412.002000000000000000000001001000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................CTGCAGAGGAATGGATAACTGTGAT2512.002000100000000000000000000000000000000000000000000000000000001000
................................................................................................................................................................................................................................................................................................GTTGTCTGCAGAGGAATGGATA........2212.002000000000000000000000000000000000000100000000000000000000000010
.................CACTTTGTCATTCTATATGTTGATGTCC.................................................................................................................................................................................................................................................................................2812.002000000000000000000000000000100010000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................GTCTGCAGAGGAATGGATAACTGT...2412.002000000000001000000000010000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................GGAATGGATAACTGTGAT1812.002000000000000010001000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................CTGCAGAGGAATGGATAACTGT...2212.002000000000000000000000000000000000200000000000000000000000000000
..........................ATTCTATATGTTGATGTCCTCTCTGCC.........................................................................................................................................................................................................................................................................2712.002001100000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................TGTCTGCAGAGGAATGGATAACTG....2412.002000000100000000000000000010000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................TGACACCGTTGTCTGCAGAGGAATGGAA.........2812.002000000000000000000000000010100000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................TTCCAAGTGACACCGTTGTCTGCAGA..................2612.002000000000000000000000000002000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TCCAAGTGACACCGTTGTCTGCAGAG.................2612.002001000000000000000000000000010000000000000000000000000000000000
......CTTTCACGCTTCACTTTGTCATTCTA..............................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000100000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................GCAGAGGAATGGATAACT.....1811.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................GTTGTCTGCAGAGGAATGGATAA.......2311.001000000000000000000000000000000000000000000000000000000000000100
....................TTTGTCATTCTATATGTTGATGTCC.................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000100000000000000000000000000000000000
CTCTATCTTTCACGCTTCACTTTGTCA...................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000001000000000000000000000000000000000000
...........ACGCTTCACTTTGTCATTCT...............................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
...........................TTCTATATGTTGATGTCCTCTCTGCCG........................................................................................................................................................................................................................................................................2711.001000000000000000000000000000001000000000000000000000000000000000
...............TTCACTTTGTCATTCTATAT...........................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
.......TTTCACGCTTCACTTTGTCATT.................................................................................................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................TGACACCGTTGTCTGCAGAGGAATGGAT.........2811.001000000000000000000000000001000000000000000000000000000000000000
........................TCATTCTATATGTTGATGTCCTCTCTGC..........................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................ACCGTTGTCTGCAGAGGAATGGATAACT.....2811.001000000000000000000000000000100000000000000000000000000000000000
.....TCTTTCACGCTTCACTTTGTCATTC................................................................................................................................................................................................................................................................................................2511.001000000000000001000000000000000000000000000000000000000000000000
..........CACGCTTCACTTTGTCAT..................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000001000
..........................................................................................................................................................................................................................................................................................GACACCGTTGTCTGCAGAGGA...............2111.001000000000000010000000000000000000000000000000000000000000000000
..............CTTCACTTTGTCATTCTAT.............................................................................................................................................................................................................................................................................................1911.001000000000000001000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................CTTCCAAGTGACACCGTTGT.........................2011.001000000000000000000000100000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TCCAAGTGACACCGTTGTCTGCAGAGG................2711.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................AGAGGAATGGATAACTGT...1811.001000000000000000001000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................GTCTTCCAAGTGACACCGT............................1911.001000000000000000000000000000000000000000000000000000000000000001
....ATCTTTCACGCTTCACTTTGT.....................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000010000000000000000000000000000
..............CTTCACTTTGTCATTCTATATGTT........................................................................................................................................................................................................................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................GAGGAATGGATAACTGTGAT2011.001000000000000010000000000000000000000000000000000000000000000000
..............CTTCACTTTGTCATTCTATATG..........................................................................................................................................................................................................................................................................................2211.001010000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................AAGTGACACCGTTGTCTGCA....................2011.001000000000000000000000000000000000001000000000000000000000000000
...............................ATATGTTGATGTCCTCTCTGCC.........................................................................................................................................................................................................................................................................2211.001100000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................CACCGTTGTCTGCAGAGGAG..............2011.001000000000000000000000000000000000000000000000000000000000000010
...................................................................................................................................................................................................................................................................................................GTCTGCAGAGGAATGGATAACTG....2311.001000000000000000000000000000000000000000000000000000000000000010
.............................CTATATGTTGATGTCCTCTCTGCC.........................................................................................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................GTCTTCCAAGTGACACCGTT...........................2011.001000000000000000000000100000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................AGTGACACCGTTGTCTGCAGAGGAAT.............2611.001010000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................GACACCGTTGTCTGCAGAGGAATGGAT.........2711.001000000000000000000000010000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................GTTGTCTGCAGAGGAATGGAT.........2111.001000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................................................................................................GCAGAGGAATGGATAACTGTGAT2311.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TCCAAGTGACACCGTTGTCT.......................2011.001000000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................CACCGTTGTCTGCAGAGGA...............1911.001000000000100000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................AAGTGACACCGTTGTCTGC.....................1911.001000000000000000000000000000000000000010000000000000000000000000
...................................................................................................................................................................................................................................................................................................GTCTGCAGAGGAATGGATAACTGTGA.2611.001000000000000000000000000010000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................GTTGTCTGCAGAGGAATGGATAACTGT...2711.001000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................CGTTGTCTGCAGAGGAATG............1911.001000000000010000000000000000000000000000000000000000000000000000
...............................ATATGTTGATGTCCTCTCT............................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
................................TATGTTGATGTCCTCTCTGCC.........................................................................................................................................................................................................................................................................2111.001000000000000000000010000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TCCAAGTGACACCGTTGTCTGCAGAGGA...............2811.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................ACACCGTTGTCTGCAGAGGA...............2011.001000000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................CACCGTTGTCTGCAGAGGAATGGA..........2411.001000010000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................CACCGTTGTCTGCAGAGGAATGGATAAC......2811.001000000000000000000000000000100000000000000000000000000000000000
..................ACTTTGTCATTCTATATGTT........................................................................................................................................................................................................................................................................................2011.001000000000000000010000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................GCCGTCTTCCAAGTGACACCGTTGTCT.......................2711.001000000000000000000000000001000000000000000000000000000000000000
................TCACTTTGTCATTCTATATGTTGATG....................................................................................................................................................................................................................................................................................2611.001000000000000000000000000100000000000000000000000000000000000000
............................TCTATATGTTGATGT...................................................................................................................................................................................................................................................................................1511.001000000000000000000000000000000000000000000000000000000000000001
..................................................................................................................................................................................................................................................................................................TGTCTGCAGAGGAATGGA..........1811.001000000000000000001000000000000000000000000000000000000000000000
.....TCTTTCACGCTTCACTTTGTCATTCTA..............................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................TTCCAAGTGACACCGTTGTCTGCAGAG.................2711.001000000000000000000000000001000000000000000000000000000000000000
...TATCTTTCACGCTTCACTTTGTCAT..................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000010000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................CACCGTTGTCTGCAGAGGAATGG...........2311.001001000000000000000000000000000000000000000000000000000000000000
.......TTTCACGCTTCACTTTGTCATTCT...............................................................................................................................................................................................................................................................................................2411.001000000000000000000100000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................CTGCAGAGGAATGGATAAC......1911.001000000000000000000100000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................GACACCGTTGTCTGCAGAGGAATG............2411.001000100000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................GACACCGTTGTCTGCAGA..................1811.001000100000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................TTGTCTGCAGAGGAATGGATAACTGTG..2711.001000000000000000000000000001000000000000000000000000000000000000
.......TTTCACGCTTCACTTTGTCATTCTAT.............................................................................................................................................................................................................................................................................................2611.001000000000000000000000000001000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................ACCGTTGTCTGCAGAGGAATGGATAAC......2711.001000000000000000001000000000000000000000000000000000000000000000
...................................GTTGATGTCCTCTCTGCC.........................................................................................................................................................................................................................................................................18140.294121000000000000000000000000000000000000000000000000000000000000
droMoj3
CACTTTCTTTCACTCTTCACTTTGTCATTCTATACGTTGAAGTCCTCTCTGTAAGTAGA-----T---C-------TAAAA--ATTAGCAA----------------------------------A-----AA-------------------GCA--------------A--------------------TC----ATGATATAATTCTATGTGAAATTGTTTTCT---------AAT-----CTAT---------TT--TA-TTTAGACCGTTTTCCAAGTAACACCGTTGTCTGCGGAGGAATGGATAACTGTGATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
CACTTTCTTTCACTCTTCACTTTGTC....................................................................................................................................................................................................................................................................................................2612.002200000
........TTCACTCTTCACTTTGTCATT.................................................................................................................................................................................................................................................................................................2111.001100000
............................................................................................................................................................................................................................................................................................CACCGTTGTCTGCGGAGGA...............1911.001000001
.............................................................................................................................................................................................................................................................................................ACCGTTGTCTGCGGAGGAAC.............2011.001100000
..................................................................................................................................................................................................................................................................................................TGTCTGCGGAGGAATGGAT.........1911.001100000
..........................................................................................................................................................................................................................................................................................AACACCGTTGTCTGCGGAGGAATGGAT.........2711.001000001
...................................................................................................................................................................................................................................................................................................GTCTGCGGAGGAATGGATAACTGT...2411.001000001
.................................................................................................................................................................................................................................................................................TTTCCAAGTAACACCGTTGTCTG......................2311.001100000
...........................................................................................................................................................................................................................................................................................ACACCGTTGTCTGCGGAGGAATGG...........2411.001100000
..........................................................................................................................................................................................................................................................................................AACACCGTTGTCTGCGGAGG................2011.001100000
...................................................................................................................................................................................................................................................................................................GTCTGCGGAGGAATGGATAA.......2011.001000001
............................................................................................................................................................................................................................................................................................CACCGTTGTCTGCGGAGG................1811.001100000
................................................................................................................................................................................................................................................................................................GTTGTCTGCGGAGGAATGGATA........2211.001000001
..........................ATTCTATACGTTGAAGTCCTCT..............................................................................................................................................................................................................................................................................2211.001100000
...................................................................................................................................................................................................................................................................................................GTCTGCGGAGGAATGGAT.........1811.001000001
.............................................................................................................................................................................................................................................................................................ACCGTTGTCTGCGGAGGAATGGATAAC......2711.001000001
..........................................................................................................................................................................................................................................................................................AACACCGTTGTCTGCGGAGGAATG............2411.001100000
............................................................................................................................................................................................................................................................................ACCGTTTTCCAAGTAACACCGTT...........................2311.001000001
..................................................................................................................................................................................................................................................................................TTCCAAGTAACACCGTTGTCTGC.....................2311.001100000
.......................................................................................................................................................................................................................................................................................AGTAACACCGTTGTCTGCGGAGGA...............2411.001100000
...............................................................................................................................................................................................................................................................................................CGTTGTCTGCGGAGGAAT.............1811.001000100
.............................................................................................................................................................................................................................................................................................ACCGTTGTCTGCGGAGGAATGGATA........2511.001100000
............................................................................................................................................................................................................................................................................................CACCGTTGTCTGCGGAGGAATGGAT.........2511.001000001
...................................................................................................................................................................................................................................................................................................GTCTGCGGAGGAATGGATAACTGTG..2511.001100000
................................................................................................................................................................................................................................................................................................GTTGTCTGCGGAGGAATGGAT.........2111.001000001
......................................................................................................................................................................................................................................................................................AAGTAACACCGTTGTCTGCGGAGGAA..............2611.001100000
.................................ACGTTGAAGTCCTCTCTACC.........................................................................................................................................................................................................................................................................2020.501100000
droGri2
CCCTTTCTTTCACTCTTCACTTTGTTATTCTATATGTTGAAGTCCTCTCCGTAAGTGAA--AGTC---TAT---------A--TTTAACAA----------------------------------C-------------TGC------CTTTGCC--------------A--------------------TG----ATAAT---------------------------------AGCATTGA--ATATA-------TA--TT-TATAGACCGTCTTCCAAGTGACACCGTTGTCTACAGAGGAATGGATAACTGTGATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
............................................................................................................................................................................................................................................................................................CACCGTTGTCTACAGAGGAATGGATA........2611.00101
...............................................................................................................................................................................................................................................................................GTCTTCCAAGTGACACCGTTGTCT.......................2411.00110
........................................................................................................................................................................................................................................................................................................CAGAGGAATGGATAACTG....1811.00110
.....................................................................................................................................................................................................................................................................................CAAGTGACACCGTTGTCTACAGAGGA...............2611.00110
.......................................................................................................................................................................................................................................................................................AGTGACACCGTTGTCTACAGAGG................2311.00110
............................................................................................................................................................................................................................................................................ACCGTCTTCCAAGTGACACCGTTGTCT.......................2711.00110
droWil2
CACTTTCCTTCACTCTTCACTTTGTTATTCTTTATGTGGATGTCCTCTCTGTAAGTACT--AAT------------------------TACAGGC--AACTTAACTATGATTAACGCCAAAACTCT-T--------------------CCAATTC--AATTAAACTAAA------------TTCT-----GTTTCT------CTGTTCTGCGTGTTTGTGTCT-----------TCTATTCA--TTTTT-------TT--TC-TTTAGACCGTCTTCCAAGTGACACCGTTGTCTGCAGAGGAATGGATAACTGTGATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................................................................................................................................................................................................................................................................................................CTGCAGAGGAATGGATAACTGT...2216.00600240
............................................................................................................................................................................................................................................................................................CACCGTTGTCTGCAGAGG................1813.00320010
............................................................................................................................................................................................................................................................................................CACCGTTGTCTGCAGAGGAA..............2013.00320100
..................................................................................................................................................................................................................................................................................................TGTCTGCAGAGGAATGGATA........2012.00210010
................................................................................................................................................................................................................................................................................................GTTGTCTGCAGAGGAATGGA..........2012.00200200
.....................TTGTTATTCTTTATGTGGATGTCCTCTC.............................................................................................................................................................................................................................................................................2812.00211000
................................................................................................................................................................................................................................................................................................GTTGTCTGCAGAGGAATGGATA........2212.00200011
.................................................................................................................................................................................................................................................................................CTTCCAAGTGACACCGTTGTCTGCAGA..................2712.00200020
..................................................................................................................................................................................................................................................................................TTCCAAGTGACACCGTTGTCTGCAGAG.................2712.00201010
.....................................................................................................................................................................................................................................................................................................CTGCAGAGGAATGGATAACTG....2112.00210010
..............................................................................................................................................................................................................................................................................................CCGTTGTCTGCAGAGGAA..............1812.00220000
...................................................................................................................................................................................................................................................................................TCCAAGTGACACCGTTGTCTGCAGAGG................2712.00202000
..................................................................................................................................................................................................................................................................................................TGTCTGCAGAGGAATGGATAACTGT...2512.00200110
..................................................................................................................................................................................................................................................................................................TGTCTGCAGAGGAATGGATAACT.....2311.00110000
.................................................................................................................................................................................................................................................................................CTTCCAAGTGACACCGTTGTCTGCAGAG.................2811.00100010
................................................................................................................................................................................................................................................................................................GTTGTCTGCAGAGGAATGG...........1911.00100010
............................................................................................................................................................................................................................................................................................CACCGTTGTCTGCAGAGGA...............1911.00100100
.........................................................................................................................................................................................................................................................................................TGACACCGTTGTCTGCAGAGGAATGG...........2611.00101000
..........................................................................................................................................................................................................................................................................................GACACCGTTGTCTGCAGAGGA...............2111.00101000
.......................................................................................................................................................................................................................................................................................................GCAGAGGAATGGATAACTGT...2011.00100010
...........................................................................................................................................................................................................................................................................................ACACCGTTGTCTGCAGAGGAAT.............2211.00100010
.............................................................................................................................................................................................................................................................................................ACCGTTGTCTGCAGAGGA...............1811.00100010
.........................................................................................................................................................................................................................................................................................................AGAGGAATGGATAACTGTG..1911.00101000
...................................................................................................................................................................................................................................................................................................GTCTGCAGAGGAATGGATAACTG....2311.00100010
................................................................................................................................................................................................................................................................................................GTTGTCTGCAGAGGAATGGATAACTGTG..2811.00100100
........................................................................................................................................................................................................................................................................................GTGACACCGTTGTCTGCAGAGGAATGG...........2711.00100100
.......................GTTATTCTTTATGTGGATGTCCT................................................................................................................................................................................................................................................................................2311.00100010
...............................TTATGTGGATGTCCTCTC.............................................................................................................................................................................................................................................................................1811.00110000
................................................................................................................................................................................................................................................................................................GTTGTCTGCAGAGGAATGGAT.........2111.00100010
...................................................................................................................................................................................................................................................................................TCCAAGTGACACCGTTGTCTGCA....................2311.00110000
.....................................................................................................................................................................................................................................................................................CAAGTGACACCGTTGTCTGCAGAGGAA..............2711.00101000
...................................................................................................................................................................................................................................................................................TCCAAGTGACACCGTTGTCTGCAGAG.................2611.00101000
............................................................................................................................................................................................................................................................................ACCGTCTTCCAAGTGACACCGTTGTCTG......................2811.00110000
..........................................................................................................................................................................................................................................................................................GACACCGTTGTCTGCAGAGGAATGG...........2511.00100010
.................CACTTTGTTATTCTTTATGTGGATGTCCT................................................................................................................................................................................................................................................................................2911.00110000
.................................................................................................................................................................................................................................................................................CTTCCAAGTGACACCGTTGTCTG......................2311.00110000
...................................................................................................................................................................................................................................................................................TCCAAGTGACACCGTTGTCT.......................2011.00100001
............................................................................................................................................................................................................................................................................ACCGTCTTCCAAGTGACACCGT............................2211.00101000
.................................................................................................................................................................................................................................................................................................TTGTCTGCAGAGGAATGGAT.........2011.00100100
..........................................................................................................................................................................................................................................................................................GACACCGTTGTCTGCAGAGGAATGGAT.........2711.00100100
....................TTTGTTATTCTTTATGTGGATGTCC.................................................................................................................................................................................................................................................................................2511.00101000
............................................................................................................................................................................................................................................................................ACCGTCTTCCAAGTGACACCGTTGTC........................2611.00101000
......................................................................................................................................................................................................................................................................................................TGCAGAGGAATGGATAACTGTGAT2411.00100010
..................................................................................................................................................................................................................................................................................................TGTCTGCAGAGGAATGGATAACTGTGA.2711.00101000
.................................................................................................................................................................................................................................................................................CTTCCAAGTGACACCGTTGTCT.......................2211.00100100
..................................................................................................................................................................................................................................................................................TTCCAAGTGACACCGTTGTCTG......................2211.00101000
.....................................................................................................................................................................................................................................................................................................CTGCAGAGGAATGGATAACTGTG..2311.00100001
..............................TTTATGTGGATGTCCTCT..............................................................................................................................................................................................................................................................................1811.00110000
........................................................................................................................................................................................................................................................................................GTGACACCGTTGTCTGCAGAGGA...............2311.00100100
..........................................................................................................................................................................................................................................................................................GACACCGTTGTCTGCAGAGGAATGGATA........2811.00100100
..............................TTTATGTGGATGTCCTCTCTACC.........................................................................................................................................................................................................................................................................2320.50110000
dp5
CACTTTCCTTCACTCTTCACTTCGTTATTCTTTACGTTGACGTCCTCTCCGTAAGTATC--AAA------------------TTTAAG------CGG----------------------------GATATGTTCACGCA---ACTAAA---------------------------------TTTT-----TGAACTC----------------------------TACA---------------TCTTC-------CA--TC-TATAGACCGTCTTCCAAGTGACACCGTTGTCTGCAGAGGAATGGATAACTGTGATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............................................................................................................................................................................................................................................................................................CACCGTTGTCTGCAGAGGA...............1915.0050500000000
...................................................................................................................................................................................................................................................................................................GTCTGCAGAGGAATGGATA........1912.0020100010000
...............................TTACGTTGACGTCCTCTCCAC..........................................................................................................................................................................................................................................................................2112.0020100001000
...............................................................................................................................................................................................................................................................................................CGTTGTCTGCAGAGGAATGGATA........2312.0020000002000
..........................ATTCTTTACGTTGACGTCCT................................................................................................................................................................................................................................................................................2012.0020200000000
........................................................................................................................................................................................................................................................................................GTGACACCGTTGTCTGCAGAGGAA..............2412.0020200000000
..........................................................................................................................................................................................................................................................................................GACACCGTTGTCTGCAGAGG................2012.0020010100000
...............................................................................................................................................................................................................................................................................................CGTTGTCTGCAGAGGAATGGAT.........2212.0020000002000
...................................................................................................................................................................................................................................................................................................GTCTGCAGAGGAATGGATAACTGTG..2512.0020200000000
...........................................................................................................................................................................................................................................................................................ACACCGTTGTCTGCAGAGG................1911.0010100000000
.......................................................................................................................................................................................................................................................................................AGTGACACCGTTGTCTGCAGAGGAATGG...........2811.0010010000000
.....................................................................................................................................................................................................................................................................................................CTGCAGAGGAATGGATAACTG....2111.0010100000000
....TTCCTTCACTCTTCACTTCG......................................................................................................................................................................................................................................................................................................2011.0010100000000
................................TACGTTGACGTCCTCTCCACC.........................................................................................................................................................................................................................................................................2111.0010100000000
......................CGTTATTCTTTACGTTGACGTCCTCTC.............................................................................................................................................................................................................................................................................2711.0010100000000
...............................................................................................................................................................................................................................................................................GTCTTCCAAGTGACACCGTTGTC........................2311.0010100000000
..............................................................................................................................................................................................................................................................................................CCGTTGTCTGCAGAGGAAT.............1911.0010100000000
............................................................................................................................................................................................................................................................................ACCGTCTTCCAAGTGACACCGTTGTCTG......................2811.0010100000000
.............................CTTTACGTTGACGTCCTCTCCA...........................................................................................................................................................................................................................................................................2211.0010000010000
........................................................................................................................................................................................................................................................................................GTGACACCGTTGTCTGCAG...................1911.0010000010000
...........ACTCTTCACTTCGTTATTT................................................................................................................................................................................................................................................................................................1911.0010000100000
.......................................................................................................................................................................................................................................................................................AGTGACACCGTTGTCTGCAGAG.................2211.0010000001000
...............................................................................................................................................................................................................................................................................GTCTTCCAAGTGACACCGTT...........................2011.0010100000000
..........................................................................................................................................................................................................................................................................................................GAGGAATGGATAACTGTG..1811.0010100000000
..............................................................................................................................................................................................................................................................................CGTCTTCCAAGTGACACCGTTGTCT.......................2511.0010100000000
........................................................................................................................................................................................................................................................................................GTGACACCGTTGTCTGCAGAG.................2111.0010000010000
...................................................................................................................................................................................................................................................................................................GTCTGCAGAGGAATGGATAACT.....2211.0010100000000
...TTTCCTTCACTCTTCACTTCG......................................................................................................................................................................................................................................................................................................2111.0010100000000
....................................................................................................................................................................................................................................................................................................TCTGCAGAGGAATGGATA........1811.0010000100000
..............................TTTACGTTGACGTCCTCTCC............................................................................................................................................................................................................................................................................2011.0010100000000
.............................CTTTACGTTGACGTCCTCTCCACC.........................................................................................................................................................................................................................................................................2411.0010001000000
.....................................................................................................................................................................................................................................................................................................CTGCAGAGGAATGGATAACTGTGA.2411.0010000000001
........................................................................................................................................................................................................................................................................................GTGACACCGTTGTCTGCAGAGGAATGG...........2711.0010010000000
...TTTCCTTCACTCTTCACTTCGTT....................................................................................................................................................................................................................................................................................................2311.0010100000000
....................................................................................................................................................................................................................................................................................................TCTGCAGAGGAATGGATAACTGTGA.2511.0010000000100
..............................................................................................................................................................................................................................................................................CGTCTTCCAAGTGACACCGTTGTC........................2411.0010100000000
....................................................................................................................................................................................................................................................................................................TCTGCAGAGGAATGGATAACTGT...2311.0010100000000
droPer2
CACTTTCCTTCACTCTTCACTTCGTTATTCTTTACGTTGACGTCCTCTCCGTAAGTATC--AAA------------------TTTAAG------CGG----------------------------GATATGTTCACGCA---ACTAAA---------------------------------TTTT-----TGAACTC----------------------------TACA---------------TCTTC-------CA--TC-TATAGACCGTCTTCCAAGTGACACCGTTGTCTGCAGAGGAATGGATAACTGTGATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............................................................................................................................................................................................................................................................................................CACCGTTGTCTGCAGAGG................1817.007700000
..........................ATTCTTTACGTTGACGTCCTCTCCACC.........................................................................................................................................................................................................................................................................2716.006600000
................................................................................................................................................................................................................................................................................................GTTGTCTGCAGAGGAATGGATA........2216.006000006
..........................................................................................................................................................................................................................................................................................................GAGGAATGGATAACTGTGAT2015.005000005
................................................................................................................................................................................................................................................................................................GTTGTCTGCAGAGGAATGGATAA.......2314.004000004
..........................................................................................................................................................................................................................................................................................................GAGGAATGGATAACTGTG..1814.004000004
................................................................................................................................................................................................................................................................................................GTTGTCTGCAGAGGAATGGAT.........2113.003000003
...................................................................................................................................................................................................................................................................................................GTCTGCAGAGGAATGGAT.........1813.003000003
......................................................................................................................................................................................................................................................................................................TGCAGAGGAATGGATAACT.....1913.003300000
................................................................................................................................................................................................................................................................................................GTTGTCTGCAGAGGAATGGA..........2013.003000003
...................................................................................................................................................................................................................................................................................................GTCTGCAGAGGAATGGATAA.......2013.003000003
..................................................................................................................................................................................................................................................................................................TGTCTGCAGAGGAATGGAT.........1913.003000003
...................................................................................................................................................................................................................................................................................................GTCTGCAGAGGAATGGATA........1913.003000003
...........................................................................................................................................................................................................................................................................................................AGGAATGGATAACTGTGAT1912.002000002
.................................................................................................................................................................................................................................................................................................TTGTCTGCAGAGGAATGGAT.........2012.002000002
.................................................................................................................................................................................................................................................................................................TTGTCTGCAGAGGAATGGATA........2112.002000002
.................................................................................................................................................................................................................................................................................CTTCCAAGTGACACCGTTGTCTGCAGA..................2712.002200000
.................................................................................................................................................................................................................................................................................................TTGTCTGCAGAGGAATGGATAACTGTG..2712.002000002
..........................ATTCTTTACGTTGACGTCCTCT..............................................................................................................................................................................................................................................................................2212.002200000
...........................TTCTTTACGTTGACGTCCTCTC.............................................................................................................................................................................................................................................................................2212.002200000
.............................CTTTACGTTGACGTCCTCTCCACC.........................................................................................................................................................................................................................................................................2412.002200000
..................................................................................................................................................................................................................................................................................................TGTCTGCAGAGGAATGGATA........2012.002000002
................................................................................................................................................................................................................................................................................................GTTGTCTGCAGAGGAATG............1812.002000002
...............................................................................................................................................................................................................................................................................................CGTTGTCTGCAGAGGAATGGATA........2312.002000002
.........................TATTCTTTACGTTGACGTCCTCTC.............................................................................................................................................................................................................................................................................2412.002200000
.......................GTTATTCTTTACGTTGAC.....................................................................................................................................................................................................................................................................................1811.001100000
......................................................................................................................................................................................................................................................................................................TGCAGAGGAATGGATAACTG....2011.001000001
.......................................................................................................................................................................................................................................................................................AGTGACACCGTTGTCTGCAGA..................2111.001010000
.................................................................................................................................................................................................................................................................................................TTGTCTGCAGAGGAATGGA..........1911.001000001
..........................................................................................................................................................................................................................................................................................................GAGGAATGGATAACTGTGA.1911.001010000
..........................................................................................................................................................................................................................................................................................GACACCGTTGTCTGCAGAGGAATGGAT.........2711.001000001
..............................................................................................................................................................................................................................................................................................CCGTTGTCTGCAGAGGAATG............2011.001010000
..................................................................................................................................................................................................................................................................................TTCCAAGTGACACCGTTGTC........................2011.001010000
......CCTTCACTCTTCACTTCGTTATT.................................................................................................................................................................................................................................................................................................2311.001010000
............CTCTTCACTTCGTTATTCTTTACG..........................................................................................................................................................................................................................................................................................2411.001010000
.ACTTTCCTTCACTCTTCACTTCGT.....................................................................................................................................................................................................................................................................................................2411.001001000
..........................................................................................................................................................................................................................................................................................GACACCGTTGTCTGCAGAGGAA..............2211.001010000
...................................................................................................................................................................................................................................................................................................GTCTGCAGAGGAATGGATAACT.....2211.001010000
.................................................................................................................................................................................................................................................................................................TTGTCTGCAGAGGAATGG...........1811.001000001
......................CGTTATTCTTTACGTTGACGTCC.................................................................................................................................................................................................................................................................................2311.001010000
.............................CTTTACGTTGACGTCCTCTCC............................................................................................................................................................................................................................................................................2111.001100000
.................................................................................................................................................................................................................................................................................................TTGTCTGCAGAGGAATGGATAAC......2311.001000001
.......................................................................................................................................................................................................................................................................................AGTGACACCGTTGTCTGCAGAGGAT..............2511.001000010
............................................................................................................................................................................................................................................................................ACCGTCTTCCAAGTGACACCGTTGTCT.......................2711.001000010
....................................................................................................................................................................................................................................................................................................TCTGCAGAGGAATGGATAAC......2011.001000001
droAna3
CACTCTCCTTCACTCTTCACTTTGTTATTCTTTACGTCGATGTCCTCTCCGTGAGTACT--CCCT---TACCTAT-----A--AT---TTC------------------------------------------------TGA------TTGCGAA--------------T------------------------AGATAATAAT------------------------------TTAT--------ATA-------TT--TT-ATTAGACCGTCTTCCAAGTGACACCGTTGTCTGCAGAGGAATGGATAACTGTGATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................ATTCTTTACGTCGATGTCCTCTCCACC.........................................................................................................................................................................................................................................................................2714.004031000
.....................................................................................................................................................................................................................................................................................................CTGCAGAGGAATGGATAACT.....2013.003030000
..........................................................................................................................................................................................................................................................................................GACACCGTTGTCTGCAGAGGAATGGAT.........2712.002100010
......................................................................................................................................................................................................................................................................................AAGTGACACCGTTGTCTGCA....................2012.002100001
.......................................................................................................................................................................................................................................................................................AGTGACACCGTTGTCTGCAGAGGAAT.............2611.001010000
...........ACTCTTCACTTTGTTATTCTTTACGTC........................................................................................................................................................................................................................................................................................2711.001000100
..........................................................................................................................................................................................................................................................................................GACACCGTTGTCTGCAGAGG................2011.001100000
....................................................................................................................................................................................................................................................................................CCAAGTGACACCGTTGTCTGCAGA..................2411.001001000
.........................................................................................................................................................................................................................................................................................................AGAGGAATGGATAACTGT...1811.001001000
................................................................................................................................................................................................................................................................................................GTTGTCTGCAGAGGAATGGATAAC......2411.001000100
...................................................................................................................................................................................................................................................................................................GTCTGCAGAGGAATGGATAACTGT...2411.001001000
............CTCTTCACTTTGTTATTCTTTA............................................................................................................................................................................................................................................................................................2211.001100000
................................................................................................................................................................................................................................................................................................GTTGTCTGCAGAGGAATGGA..........2011.001000010
..............................................................................................................................................................................................................................................................................................CCGTTGTCTGCAGAGGAA..............1811.001100000
........................................................................................................................................................................................................................................................................................GTGACACCGTTGTCTGCAGAGGAAT.............2511.001000001
................................................................................................................................................................................................................................................................................TCTTCCAAGTGACACCGTTGTCTGC.....................2511.001010000
..........................ATTCTTTACGTCGATGTCCT................................................................................................................................................................................................................................................................................2011.001010000
..................................................................................................................................................................................................................................................................................TTCCAAGTGACACCGTTGTCTGCAGAG.................2711.001100000
.......................................................................................................................................................................................................................................................................................AGTGACACCGTTGTCTGCAGAGGAATG............2711.001000001
...........................................................................................................................................................................................................................................................................................ACACCGTTGTCTGCAGAGGA...............2011.001010000
..................................................................................................................................................................................................................................................................................................TGTCTGCAGAGGAATGGAT.........1911.001000001
............................................................................................................................................................................................................................................................................................CACCGTTGTCTGCAGAGGAAT.............2111.001001000
.............................................................................................................................................................................................................................................................................................ACCGTTGTCTGCAGAGGAATGGATAAC......2711.001010000
.................................................................................................................................................................................................................................................................................CTTCCAAGTGACACCGTTG..........................1911.001001000
...............................TTACGTCGATGTCCTCTCCAC..........................................................................................................................................................................................................................................................................2111.001000001
.........................TATTCTTTACGTCGATGTCC.................................................................................................................................................................................................................................................................................2011.001000001
..................................................................................................................................................................................................................................................................................TTCCAAGTGACACCGTTGT.........................1911.001100000
................................................................................................................................................................................................................................................................................................GTTGTCTGCAGAGGAATGGAT.........2111.001000001
.....................TTGTTATTCTTTACGTCGATGTCCTCTCC............................................................................................................................................................................................................................................................................2911.001100000
.......................GTTATTCTTTACGTCGATGTCC.................................................................................................................................................................................................................................................................................2211.001010000
...........................................................................................................................................................................................................................................................................................ACACCGTTGTCTGCAGAGG................1911.001100000
....CTCCTTCACTCTTCACTTTGT.....................................................................................................................................................................................................................................................................................................2111.001100000
.............................................................................................................................................................................................................................................................................................ACCGTTGTCTGCAGAGGAAT.............2011.001000001
.....................................................................................................................................................................................................................................................................................................CTGCAGAGGAATGGATAACTGT...2211.001000010
..................................................................................................................................................................................................................................................................................................TGTCTGCAGAGGAATGGATAAC......2211.001000001
...............................TTACGTCGATGTCCTCTCCACC.........................................................................................................................................................................................................................................................................2220.501010000
droBip1
CACTCTCCTTCACTCTTCACTTTGTTATTCTTTACGTCGATGTCCTCTCCGTAAGTATCCCCGGC---GAT---------A--AT---------------------------------------------------------------TTACGAT--------------T--------------------AAGAAGATAAT---------------------------------CGAA------TGTTTAATTTATTACCCACCTTAGACCGTCTTCCAAGTGACACCGTTGTCTGCAGAGGAATGGATAACTGTGATSizeHit CountTotal NormTotal
No Reads
droKik1
CACTCTCCTTTACTCTTCACTTTGTTATTCTTTACGTCGATGTCCTCTCCGTAAGTACC--GAT----AAC----GTACCGATATAAGCCT----------------------------------T-C------------------------ACGAG------------G---AATGCTAATCCT-----TGTAATC----------------------------T-------------------CATC-------CT--TT-CTTAGACCGTCTTCCAAGTGACACCGTTGTCTGCTGAGGAATGGATAACTGTGATSizeHit CountTotal NormTotal
No Reads
droFic1
CACTCTCCTTCACTCTTCACTTTGTTATTCTTTACGTCGATGTCCTCTCCGTAAGTGCA--AGGC---GAT---------T--AGA------------------------------------------------------------------GCC--------------TCGT------------TTTTCAAAAAGCTAAC---------------------------------TTCGTTG--------------TCG--TC-CACAGACCGTCTTCCAAGTGACACCGTTGTCTGCAGAGGAATGGATAACTGTGATSizeHit CountTotal NormTotal
No Reads
droEle1
CACTATCCTTCACTCTTCACTTTGTTATTCTTTACGTCGATGTCCTCTCCGTAAGTATC--AGTT---G-------TATAAATATA-----------------------------------------TATATATATATA---GATATA---------------------------------TTAA-----TGTATAT----------------------------TATGCTTACCTTGTTA--------------TAT--TT-TATAGACCGTCTTCCAAGTGACACCGTTGTCTGCTGAGGAATGGATAACTGTGATSizeHit CountTotal NormTotal
No Reads
droRho1
CACTCTCCTTCACTCTTCACTTTGTTATTCTTTACGTCGATGTCCTCTCCGTAAGTAAC--AGGC---GA--------------TAAGCAC----------------------------------T-T--------------------GTACAT-------------------------------ATTTCCAAATACTAAC---------------------------------CTAATTA--------------TCT--CA-CACAGACCGTCTTCCAAGTGACACCGTTGTCTGCAGAGGAATGGATAACTGTGATSizeHit CountTotal NormTotal
No Reads
droBia1
CACTCTCCTTCACTCTTCACTTTGTTATTCTTTACGTCGATGTCCTCTCCGTAAGTATC--AGGC---TAT---------C--ATAATGCC------------------------------------------------TGT------TTGAGCA--------------G----------------------AGAGCTAAC---------------------------------CCAATTA--------------TCCTCCC-CACAGACCGTCTTCCAAGTGACACCGTTGTCTGCAGAGGAATGGATAACTGTGATSizeHit CountTotal NormTotal
No Reads
droTak1
CACTCTCCTTCACTCTTCACTTTGTTATTCTTTACGTCGATGTCCTCTCCGTAAGTACC--CGGC---GAT---------A--CCAAGTG--------AC---------------------------------------TTT------CTA-ACA--------------A--------------------AGAAAGCTAAT---------------------------------CCCC-----CGATCTTATCTATCCCCCA-CACAGACCGTCTTCCAAGTGACACCGTTGTCTGCTGAGGAATGGATAACTGTGATSizeHit CountTotal NormTotal
No Reads
droEug1
CACTCTCCTTCACTCTTCACTTTGTTATTCTTTACGTCGATGTCCTCTCCGTAAGTACC--AGAC---GAC---------G--ATAGGCAT----------------------------------T-T--------------------GTCTCCT--------------T--------------------CGAAAGCTAAC---------------------------------TCGATTA--------------TCC--CC-TACAGACCGTCTTCCAAGTGACACCGTTGTCTGCAGAGGAATGGATAACTGTGATSizeHit CountTotal NormTotal
No Reads
dm3
CACTCTCCTTCACTCTTCACTTTGTTATTCTTTACGTCGATGTCCTCTCCGTAAGTATT--TGGC---AAT---------G--ATAAGCCC----------------------------------T-T--------------------CTGCGCC--------------G--------------------CGGAAACTAAT---------------------------------GCCAGTAT--CGTTT-------TA--CC-CACAGACCGTCTTCCAAGTGACACCGTTGTCTGCAGAAGAATGGATAACTGTGATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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......................TGTTATTCTTTACGTCGATG....................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.....................................CGATGTCCTCTCCGTAAGTAT....................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................CCAAGTGACACCGTTGTCTGCAGAAGAT..............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TTCACTCTTCACTTTGTTATTCTT..............................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................AGTGACACCGTTGTCTGCATC..................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GTTATTCTTTACGTCGATGTCCT................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.ACTCTCCTTCACTCTTCACT.........................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TGTTATTCTTTACGTCGATGTC..................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...............................................................................................................................................................................................................................................................................GTCTTCCAAGTGACACCGTTGTCTGCAGA..................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................GACACCGTTGTCTGCAGAAGAATGGATAAC......3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................TGCAGAAGAATGGATAACTGT...2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........ACTCTTCACTTTGTTATT.................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................TGTCTGCAGAAGAATGGATAACTG....2411.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................ACACCGTTGTCTGCAGAAG................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................ACACCGTTGTCTGCAGAAGAA..............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................AAGAATGGATAACTGTGA.1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
............CTCTTCACTTTGTTATTC................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................CACCGTTGTCTGCAGAATC...............1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................ACACCGTTGTCTGCAGATC................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................CGTCGATGTCCTCTCCACC.........................................................................................................................................................................................................................................................................19200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010200000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CACTCTCCTTCACTCTTCACTTTGTTATTCTTTACGTCGATGTCCTCTCCGTAAGTATT--AGGC---AAC---------G--ATAAGCCT----------------------------------T-T--------------------CTGCGCC--------------G--------------------CGGAAACTAAT---------------------------------GCCAGTAA--CGTTT-------TA--CC-CACAGACCGTCTTCCAAGTGACACCGTTGTCTGCAGAAGAATGGATAACTGTGATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................................................................................................................................................................................................................................................................................................TGTCTGCAGAAGAATGGATAACTGTGA.2716.00600000012101010000
.................................................................................................................................................................................................................................................................................................TTGTCTGCAGAAGAATGGATAACTG....2515.00500000021001001000
..........................ATTCTTTACGTCGATGTCCT................................................................................................................................................................................................................................................................................2014.00410300000000000000
..................................................................................................................................................................................................................................................................................................TGTCTGCAGAAGAATGGATAACTGT...2514.00400000000002020000
..................................................................................................................................................................................................................................................................................TTCCAAGTGACACCGTTGTCTGCAGA..................2613.00300000021000000000
...............................TTACGTCGATGTCCTCTCCACC.........................................................................................................................................................................................................................................................................2213.00320010000000000000
...................................................................................................................................................................................................................................................................................................GTCTGCAGAAGAATGGATAACTGTGA.2613.00300000011000001000
......................................................................................................................................................................................................................................................................................................TGCAGAAGAATGGATAAC......1813.00330000000000000000
...................................................................................................................................................................................................................................................................................................GTCTGCAGAAGAATGGATAACT.....2212.00200100000000100000
...........................................................................................................................................................................................................................................................................................ACACCGTTGTCTGCAGAA.................1812.00200200000000000000
...................................................................................................................................................................................................................................................................................................GTCTGCAGAAGAATGGATA........1912.00200000100000100000
...................................................................................................................................................................................................................................................................................................GTCTGCAGAAGAATGGATAACTG....2312.00200200000000000000
............................................................................................................................................................................................................................................................................................CACCGTTGTCTGCAGAAG................1812.00200200000000000000
.................................................................................................................................................................................................................................................................................................TTGTCTGCAGAAGAATGGATAACTGT...2612.00200000000001010000
..........................ATTCTTTACGTCGATGTC..................................................................................................................................................................................................................................................................................1812.00200200000000000000
..........................ATTCTTTACGTCGATGTCCTCTCC............................................................................................................................................................................................................................................................................2412.00200000002000000000
..........................ATTCTTTACGTCGATGTCCTCTCCAC..........................................................................................................................................................................................................................................................................2611.00100100000000000000
.................................................................................................................................................................................................................................................................................CTTCCAAGTGACACCGTTGTCTGCAGA..................2711.00100100000000000000
...........................TTCTTTACGTCGATGTCCTCTCCA...........................................................................................................................................................................................................................................................................2411.00100000010000000000
..............................TTTACGTCGATGTCCTCTCCACC.........................................................................................................................................................................................................................................................................2311.00100100000000000000
.............................................................................................................................................................................................................................................................................................ACCGTTGTCTGCAGAAGAATGG...........2211.00100100000000000000
.....................................................................................................................................................................................................................................................................................CAAGTGACACCGTTGTCTGCAGAAGAA..............2711.00100000010000000000
.........................TATTCTTTACGTCGATGTCCTCTCCAC..........................................................................................................................................................................................................................................................................2711.00100000010000000000
.............................................................................................................................................................................................................................................................................................ACCGTTGTCTGCAGAAGAATGGATAACT.....2811.00100010000000000000
.................................ACGTCGATGTCCTCTCC............................................................................................................................................................................................................................................................................1711.00100000000001000000
...........................TTCTTTACGTCGATGTCCTCTCC............................................................................................................................................................................................................................................................................2311.00100010000000000000
................................................................................................................................................................................................................................................................................................GTTGTCTGCAGAAGAATGGATAACT.....2511.00100010000000000000
.....................TTGTTATTCTTTACGTCGATGT...................................................................................................................................................................................................................................................................................2211.00100100000000000000
.......CTTCACTCTTCACTTTGTTATTCTT..............................................................................................................................................................................................................................................................................................2511.00100010000000000000
.......................................................................................................................................................................................................................................................................................................GCAGAAGAATGGATAACTGT...2011.00100000000000100000
.......................................................................................................................................................................................................................................................................................................GCAGAAGAATGGATAACTG....1911.00101000000000000000
......................................................................................................................................................................................................................................................................................................TGCAGAAGAATGGATAACTG....2011.00100000000000100000
.................CACTTTGTTATTCTTTACGTCGAT.....................................................................................................................................................................................................................................................................................2411.00100010000000000000
...................................................................................................................................................................................................................................................................................................GTCTGCAGAAGAATGGATAACTGT...2411.00100010000000000000
.....................................................................................................................................................................................................................................................................................................CTGCAGAAGAATGGATAA.......1811.00100000000000100000
...................................................................................................................................................................................................................................................................................TCCAAGTGACACCGTTGT.........................1811.00100100000000000000
.....................................................................................................................................................................................................................................................................................................CTGCAGAAGAATGGATAACTGT...2211.00100100000000000000
..................................................................................................................................................................................................................................................................................................TGTCTGCAGAAGAATGGATAACTG....2411.00100000000001000000
............................TCTTTACGTCGATGTCCTCTCC............................................................................................................................................................................................................................................................................2211.00110000000000000000
...........................................................................................................................................................................................................................................................................................ACACCGTTGTCTGCAGAAGAA..............2111.00110000000000000000
.........................TATTCTTTACGTCGATGTCC.................................................................................................................................................................................................................................................................................2011.00101000000000000000
......................................................................................................................................................................................................................................................................................................TGCAGAAGAATGGATAACTGTGAT2411.00100000000000010000
.......................................................................................................................................................................................................................................................................................................GCAGAAGAATGGATAACT.....1811.00100100000000000000
...................................................................................................................................................................................................................................................................................................GTCTGCAGAAGAATGGATAACG.....2211.00110000000000000000
.....................TTGTTATTCTTTACGTCGA......................................................................................................................................................................................................................................................................................1911.00100010000000000000
............................................................................................................................................................................................................................................................................................CACCGTTGTCTGCAGAAGAA..............2011.00100100000000000000
..........................................................................................................................................................................................................................................................................................GACACCGTTGTCTGCAGAA.................1911.00100010000000000000
.........................................................................................................................................................................................................................................................................................TGACACCGTTGTCTGCAGAAGAATGGAA.........2811.00100000000000010000
...................CTTTGTTATTCTTTACGTCGATGTC..................................................................................................................................................................................................................................................................................2511.00100100000000000000
.........................................................................................................................................................................................................................................................................................TGACACCGTTGTCTGCAGAAGAATGGA..........2711.00100000010000000000
.....................................................................................................................................................................................................................................................................................................CTGCAGAAGAATGGATAACT.....2011.00100000000000100000
..............CTTCACTTTGTTATTCA...............................................................................................................................................................................................................................................................................................1760.17100000010000000000
droSec2
CACTCTCCTTCACTCTTCACTTTGTTATTCTTTACGTCGATGTCCTCTCCGTAAGTATT--AGGC---AAT---------G--ATAAGCCC----------------------------------T-T--------------------CTGCGCC--------------G--------------------CGGAAACTAAT---------------------------------GCCAGTAA--CGTTT-------TA--CC-CACAGACCGTCTTCCAAGTGACACCGTTGTCTGCAGAAGAATGGATAACTGTGATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................................................................................................................................................................................................................................................................GTCTGCAGAAGAATGGAT.........1813.0030030
...................................................................................................................................................................................................................................................................................................GTCTGCAGAAGAATGGATA........1912.0020101
................................................................................................................................................................................................................................................................................................GTTGTCTGCAGAAGAATGGAT.........2111.0010010
...............................................................................................................................................................................................................................................................................GTCTTCCAAGTGACACCGTTGT.........................2211.0011000
...................CTTTGTTATTCTTTACGTCGATG....................................................................................................................................................................................................................................................................................2311.0010100
................................................................................................................................................................................................................................................................................................GTTGTCTGCAGAAGAATGGA..........2011.0010001
...............................TTACGTCGATGTCCTCTCC............................................................................................................................................................................................................................................................................1911.0010001
...........ACTCTTCACTTTGTTATTCTT..............................................................................................................................................................................................................................................................................................2111.0011000
..................................................................................................................................................................................................................................................................................................TGTCTGCAGAAGAATGGATAACTGTG..2611.0010010
............................................................................................................................................................................................................................................................................................CACCGTTGTCTGCAGAAGAA..............2011.0010001
.....................................................................................................................................................................................................................................................................................................CTGCAGAAGAATGGATAACTGT...2211.0010100
..........................ATTCTTTACGTCGATGTCCTCTCCACC.........................................................................................................................................................................................................................................................................2711.0010100
.......................GTTATTCTTTACGTCGATG....................................................................................................................................................................................................................................................................................1911.0011000
.............................................................................................................................................................................................................................................................................................ACCGTTGTCTGCAGAAGAATGG...........2211.0011000
........................TTATTCTTTACGTCGATGTCCTCTCCACC.........................................................................................................................................................................................................................................................................2911.0011000
......................TGTTATTCTTTACGTCGATGTCC.................................................................................................................................................................................................................................................................................2311.0011000
......................TGTTATTCTTTACGTCGATGTCCT................................................................................................................................................................................................................................................................................2411.0010010
............................TCTTTACGTCGATGTCCTCTCCA...........................................................................................................................................................................................................................................................................2311.0011000
..................................................GTAAGTATT--AGGC---AAT---------G--ATAAG......................................................................................................................................................................................................................................2211.0010010
...............................TTACGTCGATGTCCTCTCCACC.........................................................................................................................................................................................................................................................................2211.0010010
.................................................................................................................................................................................................................................................................................CTTCCAAGTGACACCGTTGT.........................2011.0010010
........................................................................................................................................................................................................................................................................................GTGACACCGTTGTCTGCAGAAGAATG............2611.0010010
.............................................................................................................................................................................................................................................................................CCGTCTTCCAAGTGACACCGTTGT.........................2411.0010100
................TCACTTTGTTATTCTTTACGTC........................................................................................................................................................................................................................................................................................2211.0010100
................................................................................................................................................................................................................................................................................................GTTGTCTGCAGAAGAATGG...........1911.0010010
....................TTTGTTATTCTTTACGTCGATG....................................................................................................................................................................................................................................................................................2211.0011000
.....................................................................................................................................................................................................................................................................................................CTGCAGAAGAATGGATAACT.....2011.0010100
droYak3
CACTCTCCTTCACTCTTCACTTTGTTATTCTTTACGTCGATGTCCTCTCCGTAAGTATC--GAGC---GAT---------G--ATAAGCCC----------------------------------T-T--------------------CTGCGCC--------------T--------------------CGGAAACTAAC---------------------------------CCAG-CCACCCGTTT-------TA--CT-TACAGACCGTCTTCCAAGTGACACCGTTGTCTGCAGAAGAATGGATAACTGTGATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................................................................................................................................................................................................................................................................................ACACCGTTGTCTGCAGAAGAATGGAT.........26119.0019000000000019
...................................................................................................................................................................................................................................................................................TCCAAGTGACACCGTTGTCTGCAGAA.................26114.0014000000000014
....................................................................................................................................................................................................................................................................................CCAAGTGACACCGTTGTCTGCAGAA.................2519.00900000000009
..................................................................................................................................................................................................................................................................................TTCCAAGTGACACCGTTGTCTGCAGA..................2619.00903000000006
.....................................................................................................................................................................................................................................................................................................CTGCAGAAGAATGGATAACTGT...2214.00401000030000
...............................TTACGTCGATGTCCTCTCCACC.........................................................................................................................................................................................................................................................................2214.00411000020000
..........................................................................................................................................................................................................................................................................................GACACCGTTGTCTGCAGAAGAATGGAT.........2713.00301000020000
...........................................................................................................................................................................................................................................................................................ACACCGTTGTCTGCAGAAGAATGGATA........2712.00220000000000
.....................TTGTTATTCTTTACGTCGATGTCCTCTCC............................................................................................................................................................................................................................................................................2912.00220000000000
.............................CTTTACGTCGATGTCCTCTCCACC.........................................................................................................................................................................................................................................................................2412.00200000020000
..........................ATTCTTTACGTCGATGTCCTCTCCACC.........................................................................................................................................................................................................................................................................2712.00210100000000
................................................................................................................................................................................................................................................................................................GTTGTCTGCAGAAGAATGGAT.........2112.00202000000000
...............................TTACGTCGATGTCCTCTCC............................................................................................................................................................................................................................................................................1912.00220000000000
...........................................................................................................................................................................................................................................................................................ACACCGTTGTCTGCAGAAG................1912.00200200000000
.................................................................................................................................................................................................................................................................................CTTCCAAGTGACACCGTTGTCTGCAGA..................2712.00211000000000
.........................TATTCTTTACGTCGATGTCCTCTCCACC.........................................................................................................................................................................................................................................................................2812.00202000000000
.......................................................................................................................................................................................................................................................................................AGTGACACCGTTGTCTGCAGA..................2112.00220000000000
.................................................................................................................................................................................................................................................................................CTTCCAAGTGACACCGTTGTCTGCAGAA.................2811.00101000000000
...................................................................................................................................................................................................................................................................................................GTCTGCAGAAGAATGGATAACTGT...2411.00101000000000
..................................................................................................................................................................................................................................................................................................TGTCTGCAGAAGAATGGATAACTGT...2511.00101000000000
................................................................................................................................................................................................................................................................................TCTTCCAAGTGACACCGTTGTCTGCAGA..................2811.00101000000000
.ACTCTCCTTCACTCTTCACTTTG......................................................................................................................................................................................................................................................................................................2311.00101000000000
.........................................................................................................................................................................................................................................................................................................AGAAGAATGGATAACTGTG..1911.00100000010000
...........................TTCTTTACGTCGATGTCCTCTCCACC.........................................................................................................................................................................................................................................................................2611.00101000000000
..................................................................................................................................................................................................................................................................................................TGTCTGCAGAAGAATGGAT.........1911.00100000100000
...TCTCCTTCACTCTTCACTTTGTTATT.................................................................................................................................................................................................................................................................................................2611.00101000000000
..........................ATTCTTTACGTCGATGTCCTCTCCAC..........................................................................................................................................................................................................................................................................2611.00101000000000
.....................................................................................................................................................................................................................................................................................................CTGCAGAAGAATGGATAACT.....2011.00101000000000
..................................................................................................................................................................................................................................................................................TTCCAAGTGACACCGTTGT.........................1911.00100000010000
............................................................................................................................................................................................................................................................................ACCGTCTTCCAAGTGACACCGTT...........................2311.00100000010000
................................................................................................................................................................................................................................................................................TCTTCCAAGTGACACCGTTGTCTGCAGG..................2811.00110000000000
.................CACTTTGTTATTCTTTACGTC........................................................................................................................................................................................................................................................................................2111.00101000000000
.........................TATTCTTTACGTCGATGTCCTC...............................................................................................................................................................................................................................................................................2211.00101000000000
................................................................................................................................................................................................................................................................................................GTTGTCTGCAGAAGAATGGATA........2211.00100000010000
..................................................................................................................................................................................................................................................................................TTCCAAGTGACACCGTTGTCTGCAG...................2511.00101000000000
.....................TTGTTATTCTTTACGTCGATGT...................................................................................................................................................................................................................................................................................2211.00100100000000
..................................................................................................................................................................................................................................................................................................TGTCTGCAGAAGAATGGATAACTGTGA.2711.00101000000000
...................................................................................................................................................................................................................................................................................TCCAAGTGACACCGTTGTCTGCAGA..................2511.00101000000000
......................................................................................................................................................................................................................................................................................AAGTGACACCGTTGTCTGCAGAAGAA..............2611.00100000010000
..................................................................................................................................................................................................................................................................................TTCCAAGTGACACCGTTGTCTGCAGAAG................2811.00101000000000
........................TTATTCTTTACGTCGATGTCCTCTCCA...........................................................................................................................................................................................................................................................................2711.00101000000000
.................CACTTTGTTATTCTTTACGTCGA......................................................................................................................................................................................................................................................................................2311.00100010000000
...............................TTACGTCGATGTCCTCTCCA...........................................................................................................................................................................................................................................................................2011.00100000010000
......................................................................................................................................................................................................................................................................................AAGTGACACCGTTGTCTGCAGA..................2211.00101000000000
.........................TATTCTTTACGTCGATGTCCTCTC.............................................................................................................................................................................................................................................................................2411.00101000000000
...................................................................................................................................................................................................................................................................................TCCAAGTGACACCGTTGTCTGCA....................2311.00100100000000
..........................................................................................................................................................................................................................................................................................................GAAGAATGGATAACTGTGA.1911.00101000000000
............................................................................................................................................................................................................................................................................................CACCGTTGTCTGCAGAAG................1811.00101000000000
.....................................................................................................................................................................................................................................................................................................CTGCAGAAGAATGGATAACTGTG..2311.00100100000000
............................................................................................................................................................................................................................................................................................CACCGTTGTCTGCAGAAGAATG............2211.00100100000000
.................................................................................................................................................................................................................................................................................CTTCCAAGTGACACCGTTGTCTGC.....................2411.00100100000000
...........................TTCTTTACGTCGATGTCCTCTCCAC..........................................................................................................................................................................................................................................................................2511.00100100000000
..............CTTCACTTTGTTATTCTTTACGTC........................................................................................................................................................................................................................................................................................2411.00100000010000
..................................................................................................................................................................................................................................................................................TTCCAAGTGACACCGTTGTCTGCAGAA.................2711.00101000000000
...TCTCCTTCACTCTTCACTTTGTT....................................................................................................................................................................................................................................................................................................2311.00100000010000
................................................................................................................................................................................................................................................................................................GTTGTCTGCAGAAGAATGGA..........2011.00100000010000
..................................................................................................................................................................................................................................................................................TTCCAAGTGACACCGTTGTCTGCAGAAGA...............2911.00100000000001
..........................................................................................................................................................................................................................................................................................................GAAGAATGGATAACTGTGAT2011.00100000010000
.................................ACGTCGATGTCCTCTCCACC.........................................................................................................................................................................................................................................................................2040.25101000000000
droEre2
CACTCTCCTTCACTCTTCACTTTGTTATTCTTTACGTCGATGTCCTCTCCGTAAGTATC--GGGC---GAT---------G--ATAAGCCCTCGG--AA-------------------------------------------AGTAA-----GCC--------------C--------------------CGGAAACTAAC---------------------------------CCAC-----CCGTTT-------TA--CC-CACAGACCGTCTTCCAAGTGACACCGTTGTCTGCAGAAGAATGGATAACTGTGATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............................TTACGTCGATGTCCTCTCCACC.........................................................................................................................................................................................................................................................................2212.0020001100
.....................................................................................................................................................................................................................................................................................................CTGCAGAAGAATGGATAACTGT...2212.0020011000
.......................GTTATTCTTTACGTCGATGT...................................................................................................................................................................................................................................................................................2012.0021000100
.....................................................................................................................................................................................................................................................................................................CTGCAGAAGAATGGATAACT.....2012.0020000110
...................................................................................................................................................................................................................................................................................................GTCTGCAGAAGAATGGAT.........1812.0020000200
................................................................................................................................................................................................................................................................................................GTTGTCTGCAGAAGAATGGAT.........2112.0020000020
...................................................................................................................................................................................................................................................................................................GTCTGCAGAAGAATGGATA........1912.0020000200
............................................................................................................................................................................................................................................................................ACCGTCTTCCAAGTGACACCGTTGTC........................2611.0010000100
...................................................................................................................................................................................................................................................................................................GTCTGCAGAAGAATGGATAACTGT...2411.0010000010
...................................................................................................................................................................................................................................................................................................GTCTGCAGAAGAATGGATAACTGTG..2511.0011000000
..........................ATTCTTTACGTCGATGTCCTCTCCACC.........................................................................................................................................................................................................................................................................2711.0010100000
...................................................................................................................................................................................................................................................................................TCCAAGTGACACCGTTGTCTGCAGT..................2511.0011000000
.....................................................................................................................................................................................................................................................................................................CTGCAGAAGAATGGATAA.......1811.0011000000
..................................................................................................................................................................................................................................................................................................TGTCTGCAGAAGAATGGATAACTG....2411.0011000000
................................................................................................................................................................................................................................................................................................GTTGTCTGCAGAAGAATGGA..........2011.0010000100
...................CTTTGTTATTCTTTACGTCGATGTCC.................................................................................................................................................................................................................................................................................2611.0010000100
...................................................................................................................................................................................................................................................................................................GTCTGCAGAAGAATGGATAACTT....2311.0010000010
.................CACTTTGTTATTCTTTACGTCGATGTCCT................................................................................................................................................................................................................................................................................2911.0010100000
..................................................................................................................................................................................................................................................................................................TGTCTGCAGAAGAATGGATAA.......2111.0010001000
.............................................................................................................................................................................................................................................................................................ACCGTTGTCTGCAGAAGAATG............2111.0010000010
.......................................................................................................................................................................................................................................................................................AGTGACACCGTTGTCTGCA....................1911.0011000000
............CTCTTCACTTTGTTATTCTTTACGTC........................................................................................................................................................................................................................................................................................2611.0010000100
......................................................................................................................................................................................................................................................................................AAGTGACACCGTTGTCTGCAGAA.................2311.0011000000
......................TGTTATTCTTTACGTCGATGT...................................................................................................................................................................................................................................................................................2111.0010000100
.............................CTTTACGTCGATGTCCTCTCC............................................................................................................................................................................................................................................................................2111.0010000010
.........................TATTCTTTACGTCGATGTCCTCTCCACC.........................................................................................................................................................................................................................................................................2811.0010000010
.............................................................................................................................................................................................................................................................................................ACCGTTGTCTGCAGAAGAATGGATAACT.....2811.0011000000
..................................................................................................................................................................................................................................................................................................TGTCTGCAGAAGAATGGATAACTGTGA.2711.0011000000
........................................................................................................................................................................................................................................................................................GTGACACCGTTGTCTGCAGAA.................2111.0010000100
..........................................................................................................................................................................................................................................................................................GACACCGTTGTCTGCAGAAGAATGGATAA.......2911.0010100000
..........................................................................................................................................................................................................................................................................................GACACCGTTGTCTGCAGAAGAATGGATA........2811.0011000000
......................TGTTATTCTTTACGTCGATGTCCTC...............................................................................................................................................................................................................................................................................2511.0011000000
.................................................................................................................................................................................................................................................................................CTTCCAAGTGACACCGTTGTCTGCAGA..................2711.0011000000
.........................TATTCTTTACGTCGATGTCCTCTC.............................................................................................................................................................................................................................................................................2411.0011000000
..........................................................................................................................................................................................................................................................................................GACACCGTTGTCTGCAGAAGAATGGA..........2611.0011000000
.................................................................................................................................................................................................................................................................................................TTGTCTGCAGAAGAATGGATAACTGTG..2711.0010000100
..............................TTTACGTCGATGTCCTCTCC............................................................................................................................................................................................................................................................................2011.0010000100
..........................................................................................................................................................................................................................................................................................GACACCGTTGTCTGCAGAAGAA..............2211.0011000000
.........................................................................................................................................................................................................................................................................................................AGAAGAATGGATAACTGTG..1911.0011000000
................TCACTTTGTTATTCTTTACGTCGATGTCC.................................................................................................................................................................................................................................................................................2911.0010000001
........................................................................................................................................................................................................................................................................................GTGACACCGTTGTCTGCAGAAGAAT.............2511.0010000100
...............................................................................................................................................................................................................................................................................................CGTTGTCTGCAGAAGAATGGATA........2311.0010000010
...........................................................................................................................................................................................................................................................................................................AAGAATGGATAACTGTGA.1811.0011000000
................................................................................................................................................................................................................................................................................TCTTCCAAGTGACACCGTT...........................1911.0011000000
..................................................................................................................................................................................................................................................................................................TGTCTGCAGAAGAATGGAT.........1911.0010000010
................................TACGTCGATGTCCTCTCCAC..........................................................................................................................................................................................................................................................................2011.0010000100
.................................ACGTCGATGTCCTCTCCAC..........................................................................................................................................................................................................................................................................1930.3310000010
.................................ACGTCGATGTCCTCTCCACC.........................................................................................................................................................................................................................................................................2070.1410001000

Generated: 05/16/2015 at 10:18 PM