ID:

dvi_62

 Coordinate:

scaffold_13042:4534981-4535044 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

No conservation details.

-30.1 -30.1 -30.1

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

AGCGGCTTTATTGGCTAGCGAATACCCTACACACGTTTCGTCTTGGATTTTAAGGATTTATAACAAATTTCATTTGTTATTTAGTTAATGAAAATTTGTACTGAATCCTTAGACATCCTGGCACGACAAGTAGCAAGAAAAATGTTTGAAAAAAAAGTGTTTAT
***********************************..((((((.((((((((((((((((..((((((((((((............)))).))))))))..)))))))))))).)))).)).))))..************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR060678
9x140_testes_total
 SRR060681
Argx9_testes_total
 SRR060679
140x9_testes_total
 SRR060680
 9xArg_testes_total
 M027
male body		 SRR060689
160x9_testes_total
 M047
female body
 SRR060670
9_testes_total
 SRR060655
9x160_testes_total
 SRR060683
160_testes_total
 SRR060676
9xArg_ovaries_total
 SRR060674
9x140_ovaries_total
 SRR060675
140x9_ovaries_total
 SRR060677
Argx9_ovaries_total
 SRR060664
9_males_carcasses_total
 M028
head
 SRR060659
Argentina_testes_total
 SRR060671
9x160_males_carcasses_total
 SRR060673
9_ovaries_total
 SRR1106729
mixed whole adult body
 SRR060672
9x160_females_carcasses_total
 SRR060665
9_females_carcasses_total
 SRR060667
160_females_carcasses_total
 V116
male body		 SRR060685
9xArg_0-2h_embryos_total
 SRR060657
140_testes_total
 SRR060656
9x160_ovaries_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060654
160x9_ovaries_total
 SRR060669
160x9_females_carcasses_total
 SRR060668
160x9_males_carcasses_total
 SRR1106730
embryo_16-30h
 M061
embryo
 SRR060687
9_0-2h_embryos_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060688
160_ovaries_total
 SRR1106728
larvae
 SRR060666
160_males_carcasses_total
 SRR1106713
embryo_0-2h
 SRR060686
Argx9_0-2h_embryos_total
 SRR1106720
embryo_8-10h
 SRR1106726
embryo_14-16h
 SRR1106727
larvae
 SRR1106719
embryo_8-10h
 SRR1106721
embryo_10-12h
 SRR1106723
embryo_12-14h
 V053
head
 SRR060662
9x160_0-2h_embryos_total
 SRR1106714
embryo_2-4h
 SRR1106715
embryo_4-6h
 SRR1106717
embryo_6-8h
 SRR1106722
embryo_10-12h
 SRR1106712
embryo_0-2h
 SRR1106716
embryo_4-6h
 SRR1106718
embryo_6-8h
 SRR1106724
embryo_12-14h
 SRR1106725
embryo_14-16h
 V047
embryo
..........................................................................................AAAATTTGTACTGAATCCTTAGA................................................... 23 0 1 3895.00 3895 1298 754 584 238 113 127 119 78 59 50 59 43 54 39 30 37 11 15 16 16 16 18 7 10 11 5 6 11 8 5 5 8 5 4 3 3 4 3 1 0 1 3 2 2 3 1 0 1 2 0 2 1 1 1 1 0 1 0
..........................................................................................AAAATTTGTACTGAATCCTTAG.................................................... 22 0 1 2363.00 2363 885 551 412 195 9 61 53 28 28 19 13 19 13 17 12 0 0 3 7 0 2 6 9 1 1 1 0 1 1 5 3 0 0 4 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TAAGGATTTATAACAAATTTCA............................................................................................ 22 0 1 2078.00 2078 763 517 425 161 0 18 9 6 6 7 24 29 18 22 22 1 0 12 0 0 9 5 12 0 4 1 0 3 0 1 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TAAGGATTTATAACAAATTT.............................................................................................. 20 0 1 745.00 745 228 191 120 72 10 22 16 4 11 4 3 5 6 3 9 7 0 5 0 5 1 3 2 2 0 0 2 0 1 1 3 4 0 0 0 0 0 1 2 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................ATTTGTACTGAATCCTTAGACT................................................. 22 1 1 706.00 706 139 93 82 33 29 87 12 57 38 29 4 1 1 3 4 8 33 2 4 5 0 3 0 10 0 16 5 1 3 0 0 0 1 0 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................AAATTTGTACTGAATCCTTAGA................................................... 22 0 1 293.00 293 91 56 45 15 9 11 15 9 5 4 5 5 5 3 4 0 2 2 1 0 1 0 0 1 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AAAATTTGTACTGAATCCTTAGACC................................................. 25 1 1 187.00 187 17 26 6 14 83 12 0 11 2 7 1 0 0 0 0 0 0 0 0 6 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AAAATTTGTACTGAATCCTTA..................................................... 21 0 1 184.00 184 76 42 32 14 0 5 4 3 0 0 0 1 0 0 2 0 0 1 0 0 0 0 1 0 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................ATTTGTACTGAATCCTTAGACC................................................. 22 1 1 167.00 167 19 14 11 8 67 13 0 15 8 3 0 0 0 1 0 2 0 0 2 2 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AAAATTTGTACTGAATCCTT...................................................... 20 0 1 125.00 125 46 32 20 7 0 3 2 3 4 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................AAATTTGTACTGAATCCTTAG.................................................... 21 0 1 121.00 121 47 26 17 9 0 2 9 2 0 1 1 0 0 1 1 0 0 0 1 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................TAAGGATTTATAACAAATTTC............................................................................................. 21 0 1 111.00 111 33 16 14 5 7 1 16 0 0 2 0 1 0 1 1 3 0 2 0 1 2 1 0 0 0 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0
..........................................................................................AAAATTTGTACTGAATCCTTAGAC.................................................. 24 0 1 91.00 91 24 16 6 6 18 3 3 0 0 0 0 0 1 0 0 7 0 0 0 3 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................ATTTGTACTGAATCCTTAGAC.................................................. 21 0 1 56.00 56 16 8 7 2 11 4 0 1 0 2 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................TAAGGATTTATAACAAATTTCC............................................................................................ 22 1 1 53.00 53 16 16 9 6 0 2 2 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................GAAAATTTGTACTGAATCCTTAG.................................................... 23 0 1 42.00 42 21 10 5 4 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................TTTGTACTGAATCCTTAGACT................................................. 21 1 1 42.00 42 6 3 1 4 3 7 0 5 2 3 0 1 0 0 0 0 4 0 2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AAAATTTGTACTGAATCCTTAGAA.................................................. 24 1 1 41.00 41 11 4 3 1 3 1 3 0 0 1 2 0 1 2 0 3 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0
..............................................................................................TTTGTACTGAATCCTTAGACC................................................. 21 1 1 26.00 26 2 0 1 0 14 6 0 2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................ATTTGTACTGAATCCTTAGA................................................... 20 0 1 26.00 26 3 8 4 4 0 0 2 1 0 1 0 0 1 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................AATTTGTACTGAATCCTTAGA................................................... 21 0 1 26.00 26 8 4 2 2 0 1 4 2 0 0 0 0 0 0 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................ATTTGTACTGAATCCTTAGACA................................................. 22 0 1 22.00 22 5 4 4 2 0 2 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
..........................................................................................AAAATTTGTACTGAATCCTTAGACCC................................................ 26 2 1 22.00 22 1 4 0 4 10 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................GAAAATTTGTACTGAATCCTTAGA................................................... 24 0 1 21.00 21 6 4 3 1 0 3 0 1 1 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AAAATTTGTACTGAATCCT....................................................... 19 0 1 20.00 20 5 1 5 1 3 1 0 0 0 1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AAAATTTGTACTGAATCCTTAGG................................................... 23 1 1 19.00 19 0 1 0 0 13 1 0 0 0 0 0 0 0 1 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AAAATTTGTACTGAATCCTTAGAAA................................................. 25 1 1 17.00 17 0 0 0 0 0 0 3 0 0 0 2 0 1 0 0 1 0 0 1 0 1 0 0 0 4 0 0 1 0 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................CAAATTTGTACTGAATCCTTAGA................................................... 23 1 1 10.00 10 2 1 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................GAAAATTTGTACTGAATCCTT...................................................... 21 0 1 10.00 10 3 1 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................AAGGATTTATAACAAATTTCAT........................................................................................... 22 0 1 9.00 9 2 0 4 1 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................CAAAATTTGTACTGAATCCTTAGA................................................... 24 1 1 9.00 9 2 0 4 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................TTAAGGATTTATAACAAATTT.............................................................................................. 21 0 1 9.00 9 2 2 1 1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................CATTTGTACTGAATCCTTAGACT................................................. 23 2 1 9.00 9 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TAAGGATTTATAACAAATT............................................................................................... 19 0 1 8.00 8 3 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AAAATTTGTACTGAATCCTTAGC................................................... 23 1 1 8.00 8 1 0 0 0 1 2 0 2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................TTTGTACTGAATCCTTAGACTT................................................ 22 1 1 8.00 8 2 1 1 1 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AAAATTTGTACTGAATCCTTAGT................................................... 23 1 1 8.00 8 3 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AAAATTTGTACTGAATCCTTC..................................................... 21 1 1 8.00 8 3 1 1 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................ATTTGTACTGAATCCTTAGACTT................................................ 23 1 1 8.00 8 1 0 1 1 0 0 0 3 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................AAATTTGTACTGAATCCTTAGACC................................................. 24 1 1 8.00 8 0 1 1 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................CAAAATTTGTACTGAATCCTTAG.................................................... 23 1 1 7.00 7 0 3 3 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TAAGGATTTATAACAAATTTCAA........................................................................................... 23 1 1 7.00 7 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................AATTTGTACTGAATCCTTAG.................................................... 20 0 1 7.00 7 2 0 2 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TAAGGATTTATAACAAATTTCAT........................................................................................... 23 0 1 7.00 7 1 1 1 0 0 0 0 0 0 0 0 0 0 1 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................AAGGATTTATAACAAATTTCA............................................................................................ 21 0 1 7.00 7 2 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AAAATTTGTACTGAATCCTTAGTC.................................................. 24 1 1 7.00 7 3 1 0 0 0 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TAAGGATTTATAACAAATTTCACC.......................................................................................... 24 2 1 7.00 7 2 2 0 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AAAATTTGTACTGAATCCTTAGCC.................................................. 24 1 1 7.00 7 2 1 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................GAAAATTTGTACTGAATCCTTA..................................................... 22 0 1 6.00 6 3 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AAAATTTGTACTGAATCCTTAGACT................................................. 25 1 1 6.00 6 2 0 0 0 1 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................AAATTTGTACTGAATCCTTA..................................................... 20 0 1 6.00 6 0 2 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TAAGGATTTATAACAAATTTCCC........................................................................................... 23 2 1 6.00 6 0 1 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................TTTGTACTGAATCCTTAGACCT................................................ 22 1 1 6.00 6 1 0 2 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AAAATTTGTACTGAATCCTTAGAT.................................................. 24 1 1 6.00 6 2 1 0 1 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................AAGGATTTATAACAAATTT.............................................................................................. 19 0 1 6.00 6 1 2 2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................AAATTTGTACTGAATCCTTAGAC.................................................. 23 0 1 6.00 6 2 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................TTTGTACTGAATCCTTAG.................................................... 18 0 1 5.00 5 2 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................CTAAGGATTTATAACAAATTT.............................................................................................. 21 1 1 5.00 5 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AAAATTTGTACTGAATCCTTAGTCC................................................. 25 2 1 5.00 5 2 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AAAATTTGTACTGAATCCTTAGACA................................................. 25 0 1 5.00 5 0 0 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AAAATTTGTACTGAATCCTTT..................................................... 21 1 1 5.00 5 3 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TAAATTTGTACTGAATCCTTAG.................................................... 22 1 1 4.00 4 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................TGAAAATTTGTACTGAATCCTT...................................................... 22 0 1 4.00 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................CATTTGTACTGAATCCTTAGACC................................................. 23 2 1 4.00 4 0 2 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AAAATCTGTACTGAATCCTTAGA................................................... 23 1 1 4.00 4 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AAAATTTGTACTGAATCC........................................................ 18 0 1 4.00 4 0 1 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................TTTGTACTGAATCCTTAGACA................................................. 21 0 1 4.00 4 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................TTTGTACTGAATCCTTAGA................................................... 19 0 1 4.00 4 1 0 1 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................AAATTTGTACTGAATCCTTAGACT................................................. 24 1 1 4.00 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................ATTTGTACTGAATCCTTAGACCC................................................ 23 2 1 4.00 4 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AAAATTTGTACTGAATTCTTAGA................................................... 23 1 1 4.00 4 1 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................CTAAGGATTTATAACAAATTTCA............................................................................................ 23 1 1 4.00 4 0 0 1 2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AAAATTTGTACTGAATCCTTCGA................................................... 23 1 1 4.00 4 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AAAATTTGTACTAAATCCTTAGA................................................... 23 1 1 4.00 4 2 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AAAATTTGTACTGAGTCCTTAG.................................................... 22 1 1 3.00 3 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AAAATTTGTACTAAATCCTTAG.................................................... 22 1 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................GTACTGAATCCTTAGACT................................................. 18 1 1 3.00 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TAAATTTGTACTGAATCCTTAGA................................................... 23 1 1 3.00 3 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................ATTTGTACTGAATCCTTATACT................................................. 22 2 1 3.00 3 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AAAACTTGTACTGAATCCTTAGA................................................... 23 1 1 3.00 3 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................GAAATTTGTACTGAATCCTTAGA................................................... 23 1 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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.............................................................................................ATTTGTACTGAATCCTTAGCCT................................................. 22 2 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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..................................................TAAGGGTTTATAACAAATTTCATC.......................................................................................... 24 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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..................................................TAAGGATTTATAACAAATTTCATCT......................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................TAGGATTTATAACAAATTTCA............................................................................................ 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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..........................................................................................AAGATTTGTACTGAATCCTTAGAAA................................................. 25 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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.............................................................................................CTTTGTACTGAATCCTTAGACC................................................. 22 2 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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..........................................................................................AAAATTTGTACTGAATCCTTAGACG................................................. 25 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................AAATTTGTACTGAATCCTTAGAT.................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................GTTTGTACTGAATCCTTAGACT................................................. 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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..........................................................................................AAAATTTGAACTGAATCCTT...................................................... 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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..........................................................................................................CCTTAGACATTCTGGCCCG....................................... 19 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AAAATTTGTACTGAATCCTTACC................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AAAATTTGTACTGAACCCTT...................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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.............................................................................................ATTTGTCCTGAATCCTTAGACT................................................. 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AAAATTTGTACTGATTCCTTAGT................................................... 23 2 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................ATTTATACTGAATCCTTAGACT................................................. 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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....................................................................................TTCAGTAAAATTTGTACTGAATCCTTAGA................................................... 29 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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..................................................TAAGGCTTTATAACAAATTT.............................................................................................. 20 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AAAATTTGTACTGAATCCTTAGACCCC............................................... 27 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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......................................................................................GATCAAAATTTGTACTGAATCCTTAG.................................................... 26 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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.................................................CTAAGGATTTATAACAAATTTC............................................................................................. 22 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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.............................................................................................ATTTGTACTGAATCCCTAGACT................................................. 22 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................GAAAATTTGTACTGAATCCTTCGA................................................... 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AAAATTTGTACTGAATCCTTCC.................................................... 22 2 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AAAATTTGTACTGCCTCCTTCGA................................................... 23 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................AATAAAATTTGTACTGAATCCTTAGA................................................... 26 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................TTTGTACTGAATCCTTAGACCTT............................................... 23 2 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TAAGGATTTATACCAAATTTCA............................................................................................ 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TAAGGATTTATAACAAAT................................................................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AAAATTTATACTGAATCCTTAG.................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AAAATTTGTACTGACTCCTTAGA................................................... 23 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................AAATTTGTACTGAGTCCTTAGA................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AAAATTTGTACTGAATCCTTAGATAA................................................ 26 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................TGAAAATTTGTACTGAATCCTTA..................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AAAATTTGTACTAAATCCTTAGTC.................................................. 24 2 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TAAGGATCTATAACAAATTT.............................................................................................. 20 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TAAGGATTTATCACAAATTTCA............................................................................................ 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AAAATTTGTACTGCATCCTTAGA................................................... 23 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AAAATTTGTACTGATTCCTTAG.................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AAAATTTGTTCTGAATCCTTAGA................................................... 23 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................ATTTGTACTGAATCCTTAGACCTT............................................... 24 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TAATGATTTATAACAAATTTCA............................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................CAAAATTTGTACTGAATCCTTAGAC.................................................. 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CAAGGATTTATAACAAATTTCC............................................................................................ 22 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TAAGGATTTATAGCAAATTT.............................................................................................. 20 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................TTTGTACTGAATCCTTCGACCTT............................................... 23 3 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AAAATTTGTACTGAATCCCTAGA................................................... 23 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................ATTTGTACTGAATCATTAGA................................................... 20 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AAAATTTGTAATGAATACTTAGA................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AAAATTTGTACTGAATCCTTTGA................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AAAATTTGTACTGAATCCTCAG.................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................AAATTCGTACTGAATCCTTAGAC.................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................AAAATTGTACTGAATCCTTA..................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................ATTTGTACTGAATACTTAGACT................................................. 22 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................CATTTGTACTGAATCCTTAGAC.................................................. 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AAAATTTGTACTGTATCCTTAG.................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TAAGGATTTATAACAAATTTCATTTGTC...................................................................................... 28 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AAAATTTGTACTGAATCGTTAGA................................................... 23 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

ATAAACACTTTTTTTTCAAACATTTTTCTTGCTACTTGTCGTGCCAGGATGTCTAAGGATTCAGTACAAATTTTCATTAACTAAATAACAAATGAAATTTGTTATAAATCCTTAAAATCCAAGACGAAACGTGTGTAGGGTATTCGCTAGCCAATAAAGCCGCT
************************************..((((.((.((((.((((((((((((..((((((((.((((............))))))))))))..)))))))))))))))).))))))..*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060667
160_females_carcasses_total
 SRR060671
9x160_males_carcasses_total
..........................................................................CTTTAACGAAATAACAGATG...................................................................... 20 3 20 0.10 2 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13042:4534931-4535094 + dvi_62 AGCGGCTTTATTGGCTAGCGAATACCCTACACACGTTTCGTCTTGGATTTTAAGGATTTATAACAAATTTCATTTGTTATTTAGTTAATGAAAATTTGTACTGAATCCTTAGACATCCTGGCACGACAAGTAGCAAGAAAAATGTTTGAAAAAAAAGTGTTTAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
AGCGGCTTTATTGGCTAGCGAATACCCTACACACGTTTCGTCTTGGATTTTAAGGATTTATAACAAATTTCATTTGTTATTTAGTTAATGAAAATTTGTACTGAATCCTTAGACATCCTGGCACGACAAGTAGCAAGAAAAATGTTTGAAAAAAAAGTGTTTATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body
..........................................................................................AAAATTTGTACTGAATCCTTAGA...................................................2313895.00389511337119585965011001030183755781516164354593912985842387541150311043127112012121311013241680010
..........................................................................................AAAATTTGTACTGAATCCTTAG....................................................2212363.00236390530128010000001260935283271913131788541219555111921141610000000000000000000001
..................................................TAAGGATTTATAACAAATTTCA............................................................................................2212078.002078019006010000002250122161290291824227634251615173714000180000000000000000000000
..................................................TAAGGATTTATAACAAATTT..............................................................................................201745.007451071601112000000093123145105633228120721910400000220200000000010001054002
...........................................................................................AAATTTGTACTGAATCCTTAGA...................................................221293.0029390150053002000040000092115553914515560400000110000000000010000000001
..........................................................................................AAAATTTGTACTGAATCCTTA.....................................................211184.00184004000000000002001003100100076321442100200050000000000000000000000
..........................................................................................AAAATTTGTACTGAATCCTT......................................................201125.0012500200400000000000001300000104620732040110030000000000000000000000
...........................................................................................AAATTTGTACTGAATCCTTAG....................................................211121.0012100901001000000100000200100114717926010100020000000000000000000010
..................................................TAAGGATTTATAACAAATTTC.............................................................................................211111.00111731610002000000110000022010013314516020000010001000000100000010000
..........................................................................................AAAATTTGTACTGAATCCTTAGAC..................................................24191.009118731001000000000000000000100246616000000030000000000000010130000
.............................................................................................ATTTGTACTGAATCCTTAGAC..................................................21156.00561110100000100000000001000100016728020000040000000000000000000010
.........................................................................................GAAAATTTGTACTGAATCCTTAG....................................................23142.00420000010000000000000000000010215410000000000000000000000000000000
.............................................................................................ATTTGTACTGAATCCTTAGA...................................................20126.002601200000000000010000100001003448010000000000000000000000000000
............................................................................................AATTTGTACTGAATCCTTAGA...................................................21126.002600400000000000100000200200008224000000010000000000000000000000
.............................................................................................ATTTGTACTGAATCCTTAGACA.................................................22122.002200100000000000000000300000005424000000020000000000000000000100
.........................................................................................GAAAATTTGTACTGAATCCTTAGA...................................................24121.002100000100000000010000110000006314000000030000000000000000000000
..........................................................................................AAAATTTGTACTGAATCCT.......................................................19120.002032000010000000000000000000005511010000010000000000000000000000
.........................................................................................GAAAATTTGTACTGAATCCTT......................................................21110.001000000000000000000000000000003601000000000000000000000000000000
...................................................AAGGATTTATAACAAATTTCAT...........................................................................................2219.00900000000000000000000010001002410000000000000000000000000000000
.................................................TTAAGGATTTATAACAAATTT..............................................................................................2119.00900000000000000000000000000202112000000000000000000000000001000
..................................................TAAGGATTTATAACAAATT...............................................................................................1918.00800000000000000000000000000003302000000000000000000000000000000
............................................................................................AATTTGTACTGAATCCTTAG....................................................2017.00700000000000000100000100000002210000000000000000000000000000000
..................................................TAAGGATTTATAACAAATTTCAT...........................................................................................2317.00700000000000000100000011000011101000000000000000000000000000000
...................................................AAGGATTTATAACAAATTTCA............................................................................................2117.00700000000000000000000000000002212000000000000000000000000000000
.........................................................................................GAAAATTTGTACTGAATCCTTA.....................................................2216.00600000000000000000000000000003102000000000000000000000000000000
...........................................................................................AAATTTGTACTGAATCCTTA.....................................................2016.00600100000000000000000000000000212000000000000000000000000000000
...................................................AAGGATTTATAACAAATTT..............................................................................................1916.00600000000000000000000000010001202000000000000000000000000000000
...........................................................................................AAATTTGTACTGAATCCTTAGAC..................................................2316.00610010000000000000000000000002011000000000000000000000000000000
..............................................................................................TTTGTACTGAATCCTTAG....................................................1815.00500100000000000001000000000002001000000000000000000000000000000
..........................................................................................AAAATTTGTACTGAATCCTTAGACA.................................................2515.00500000000000000000000000100000200000000020000000000000000000000
........................................................................................TGAAAATTTGTACTGAATCCTT......................................................2214.00400000000000000000100000000003000000000000000000000000000000000
..........................................................................................AAAATTTGTACTGAATCC........................................................1814.00410000000000000000000000000000201000000000000000000000000000000
..............................................................................................TTTGTACTGAATCCTTAGACA.................................................2114.00401000100000000000000000000001001000000000000000000000000000000
..............................................................................................TTTGTACTGAATCCTTAGA...................................................1914.00400100100000000000000000000001100000000000000000000000000000000
...............................................................................................TTGTACTGAATCCTTAGA...................................................1813.00300000000000000000000000000000210000000000000000000000000000000
..............................................................................................TTTGTACTGAATCCTTAGAC..................................................2013.00300000000000000000000000000001010000000010000000000000000000000
...........................................................................................AAATTTGTACTGAATCCTT......................................................1913.00300100000000000000000000000002000000000000000000000000000000000
............................................................................................AATTTGTACTGAATCCTTA.....................................................1912.00200000000000000000000000000001001000000000000000000000000000000
.............................................................................................ATTTGTACTGAATCCTTAG....................................................1912.00200000000000000000000000000002000000000000000000000000000000000
.........................................................................................GAAAATTTGTACTGAATCCT.......................................................2012.00200000000000000000000000000100100000000000000000000000000000000
...........................................................................................AAATTTGTACTGAATCCT.......................................................1811.00100000000000000000000000000001000000000000000000000000000000000
....................................................AGGATTTATAACAAATTTCA............................................................................................2011.00100000000000000000000000010000000000000000000000000000000000000
...................................................AAGGATTTATAACAAATTTC.............................................................................................2011.00100000000000000000000000000000010000000000000000000000000000000
..................................................TAAGGATTTATAACAAAT................................................................................................1811.00100000000000000000000000000001000000000000000000000000000000000
........................................................................................TGAAAATTTGTACTGAATCCTTA.....................................................2311.00100000000000000000000000000001000000000000000000000000000000000

Generated: 04/16/2014 at 10:13 AM