dvi_5929

exon [dvir_GLEANR_6021:5]; exon [dvir_GLEANR_6021:6]; CDS [Dvir\GJ20594-cds]; CDS [Dvir\GJ20594-cds]; intron [Dvir\GJ20594-in]

GGACCGTCACCTGTCGAAATTCTGTACATCGGTCGACGGCGTATGCGTGACACACTGGTTCGACCTTTTACCGTTCAGACTTTTGATCAAACTATTTTGAATCGAATAAATATAAAAGAAAAGTCTACCACGTTGTTAAGCACCGACAAACAAACTGAACGGTGTCAGGCTCAAA ************************************************((((((..(((((((.......((((.(((.....))))))).......)))))))..))))))...........************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V053 head	M047 female body
.................................................................................................................AAAAGCACAGGCTACCACG...........................................	19	3	14	0.07	1	1	0
.........................ACATCGCTCGACGACGTATT..................................................................................................................................	20	3	16	0.06	1	0	1

Species	Coordinate	ID	Alignment
droVir3	scaffold_12875:10268037-10268211 -	dvi_5929	CCTGGCAGTGGACAGCTTTAAGACATGTAGCCAGCTGCCGCATACGCACTGTGTGACCAAGCTGGAAAATG-------GCAAGTCTGAA---A----ACTAG------------------------T---TTGA------------------TAAA----------A---------------------------------CTTAGCT--TATT-------TATA-T-TTTCTTTTCAGATGGTGCAACAATTCGTGGCTGTTTGTTTGACTTGCCACAGTCCGAGTTT
droMoj3	scaffold_6496:16733453-16733632 +		CCTGGCCATCGAGAGCTTCCAGACCTGCAGTCAGCTGCCACATACGCACTGTGTGACCAGGCTGGAGAACG-------GTAAGCCAGAC---A----ATCGA------------------------TG--TGA-----GTTCC-----C-GGGGAG----------A----GACT-----------------------TTTCAA-------------------ACG-GTTCCTTTCAGATGGTGCTACGGCCCGAGGCTGCCTCTACGACCTGGATCAGACTCAGTTT
droGri2	scaffold_15245:3415258-3415436 -		TTTGGCAGTTGCCCAATTTAAGACCTGTAACCAGTTCCCGCATCCACAATGTATGACGAGATTGGAGGATG-------GTAAGTGCGAA---A----TCCAG------------------------TA--TTAA------------------TCGA----------T----GCGT-----------------------TTGTT-ATCAATCCC------------T-CAATTTCCCAGATGGTTCAACAATTCGTGGTTGTCTTTATGATCTACCACAGGCGCACTTT
droWil2	scf2_1100000004514:2994911-2995100 -		CCAAGATGTGAGCACTTTCACCACATGCAGTCAATTGCCGCATACGAATTGTGTAACTCGATTGGAAAGTG-------GTAAGTCTCAATGAG---TGAAAA---------------------------------T-----------AAAAA--TAACCAACACAA-T--------------------CAAAATGCTA------AA------A----C----TTTC-ATTATCCATAGATGGCTCTACCACTCGTGGTTGTCTCACCGATCTTAACCAAAATGATTTT
dp5	3:15264650-15264831 -		CCAGGCCGTCGGCAGCTTCGACACCTGCAGCCAAATGCCGCATACCGGCTGTGTCACGCGCCTTCTGAGCG-------GCAAGTACAGC---C----GCATA-----------------------------TCAATTAG-----------GG------------------------------------CCCAATGCTA------AT------C----TTTTTTCTCCTCCTCTGGCAGATGGTGCCACCACACGAGGATGTCTGTACGACCAGGAACAGTCCGACTTT
droPer2	scaffold_4:3786690-3786871 +		CCAGGCCGTCGGCAGCTTCGACACCTGCAGCCAAATGCCGCATACCGGCTGTGTCACGCGTCTTCTGAGCG-------GCAAGTACAGC---C----GCATA-----------------------------TCAATTAG-----------GG------------------------------------CCCAATGCTA------AT------C----TTTGCTCTCCTCCTCTGGCAGATGGTGCCACCACACGAGGATGTCTGTACGACCAGGAACAGTCCGACTTT
droAna3	scaffold_13266:11086839-11087022 -		CACTGCCGTGGGCACCTTCAACACCTGCAGTCAGATGCCACATACGGGCTGTGTCACTAGATTGGAAAGCG-------GTGAGTTCTGA---G----GCCT------------------------------TCA------------------TTAA----------ATATT----AA-----------AACATA----------AC------CTATAATATTTCTA-CAATTTCCTAGACGGAGCCACCACTCGAGGCTGTTTGTATGACCTTGGTCAGTCAGAGTTT
droBip1	scf7180000396547:1381435-1381617 +		CACTGCCATAGGCACCTTCAACACCTGCAGTCAGATGCCACATACGGGCTGTGTTACCAAATTGGAAAACG-------GTGAGTTCTGA---G----TCT-------------------------------TAG------------------TTTA----------ATAAT----AA-----------AACAAT----ATTTTAAACA------------ATTGTA-CTGTTTCCTAGACGGAGCCACAACTCGAGGCTGTTTGTATGATCTTGGTCAGTCTGAGTTC
droKik1	scf7180000302366:246447-246637 +		CCAGTCAGTGGGCAGCTTCCAGACCTGCAGCCAGATGCCGCACACGGGATGCTTCACCAAGCTGGAGGACGGTGAGTT----ATCTGGG---C----GGCGGG--------------AC--G-CATCA-TCACAATT-------------------------TCA-----------A---------------ATTGA-------ACT--CCTT-------TATCTT-TTTCTTTAAAGATGGTTCCACCAACCGTGGCTGCCTTTACGATCTGGACCAGACACCGTTT
droFic1	scf7180000453858:117654-117838 -		TACTGCCATCGGCAATTTCGAGACCTGCAGCCAGTTGCCGCACACCGGATGTTACACCAAATTGGAGGACG-------GTGAGTTTAGC---A----TGATAA------------------AC-TT-TTTCTGATTT-------------------------TCA-----------A------------------------ATAATTTATGTT-------TAAAA--TTATGTTTCAGATGGTTCCACTAACCGTGGTTGCCTGTACAATCTTGGCCAGTCTGAATTC
droEle1	scf7180000491211:57986-58217 -		CACGAAGATCACTCTGATAGGAAATTGTGGAGTCTTGCCCTATACAAGTTGTCAGACGCGTGTCAGAAG----------TAAGTGAACT---TACCTTAAAA-CATTGCAAGCTAGCTCGAAT-TT-CTTGTGATTTGA----AACTAGATT--GGTCTAGTCGTA-TTTT----GA-----------ACTAATGA----------------TTGTACTATCTC-C-ATTCTTTTTAGATGGCATCACCCAGCGCAGTTGTCTGAGCAGTTTGCCTCGTGAACAGTTA
droRho1	scf7180000768041:15000-15231 -		CTCAAAGATCACTCTCATAGGACATTGTGGAATCTTGCCCTATTCTAGCTGCCAGACACGTGTCAGAG----------GTGAGTTGAGA---TACCCTAAAA-CCTTTAGACTTAGCTTGAAC-TT-CTTCCAG-TTAA----AGCTAGATC--TCCCCAGTCTTA-TCAA----GA-----------ACTAATGA----------------CTTAAATTCCTCCG-TATCTTTCTAGATGGCATAACCCAGCGTAGTTGCCTTAGCAGTTTGCCCCGCGAACAGTTG
droBia1	scf7180000301754:4808884-4809077 -		CCAGGCCATAGGAGTCTTTGAAACATGCAGCCAGCTGCCCCACACCGGATGCTTCACCAAGTTGGAGGATG-------GTAAGTCAAGA---A----AA--GG--------------------T--TT--TTAAACTGG-----------GGGAAGGCTATTTCT-----------A---------------------------ACAAATCTCTTT----AATATC-GCCTCTTTCAGACGGTTCCACCAACCGTGGTTGCCTGTACGACCTCGGCCAGTCTGAATTC
droTak1	scf7180000415681:280988-281092 -		CGAGGCCGTGGGTGTCTTTGCCACCTGCAGCCAGTTGCCCCACACGGGATGCTTTACCAAATTGGAGGATG-------GTGAGTTTAGT---G----------------------------------------------------------------------------------------------------------------------------------------------------GCGCAACATGTCATATCTATAT-------------------------
droEug1	scf7180000409672:7537192-7537379 -		CCATGCCATTGGAAACTTCGAAACCTGCAGTCAGTTGCCGCACACAGGATGCTACACCAAATTGGAGAGTG-------GTAAGTTTAGA---C----AAATAG------------------AGT--GT--TTCC--------T-----T--------------------------GAGTAAATAATTAAATATTGGT------AATC------------------C-CTCTTCCTTAGATGGTTCCACCAACCGTGGTTGCCTCTACAATCTTGGCCAGTCTGAGTTT
dm3	chr2R:17710044-17710230 -		CTACGCCATTGGAACCTTCAGCACCTGCAGTCAGTTGCCCCACACAGGATGCTTCACCAGATTGGAGAACG-------GTACGTTTGGA---A----AGAAGG--------------------T--TT--TCAG------------------TCAA----------A----GATT-----------------------TCCTTAATCAATCCA-------TATATA-CTTCTTCCTAGATGGTTCAACCCAACGTGGCTGCCTGTACGATCTCGACCAGACTGATTTT
droSim2	2r:18248452-18248634 -		CCAGGCCATTGGAACCTTCAGCACCTGCAGTCAGTTGCCCCACACAGGATGCTTCACCAGATTGGAGAATG-------GTACGTTTGGA---A----AAAAGG--------------------T--TT--TTAG------------------TCAG----------A----GATT-----------------------TTCTTAATCCATCCA-----------TA-CTCTTTCCTAGATGGTTCAACCCAACGTGGCTGCCTGTACGATCTCGACCAGACTGATTTT
droSec2	scaffold_9:1025107-1025293 -		CCAGGCCATTGGAACCTTCAGCACCTGCAGTCAGTTGCCCCACACAGGATGCTTCACCAGATTGGAGAATG-------GTACGTTTGAA---A----AGAAGG--------------------T--TT--TTAG------------------TCAA----------A----TATT-----------------------TCTTTAATCCAGCCA-------TATATA-CTTTTTCCTAGATGGTTCAACCCAACGTGGCTGCCTGTACGATCTCGACCAGACTGATTTT
droYak3	2R:11477575-11477761 +		CCTGGCTATTGGTACCTTCAACACCTGCAGTCAGTTGCCCCACACAGGATGCTACACCAGATTGGAGAATG-------GTATGTACACC---A----AGAAGT--------------------T--TC--TTAG------------------TCAT----------A----TATT-----------------------TCCTTAACCAATCTT-------TATAAC-TTTTCTTCTAGATGGTTCCACCCAGCGTGGCTGCCTGTACGATCTTGGCCAGACCGATTTT
droEre2	scaffold_4845:11841360-11841543 -		CCAGGCTATTGGAACCTTCAAGACCTGCAGTCAGTTGCCCCACACAGAATGCTTCACCAGATTGGAGAGCG-------GTACGTCCAGA---G----TGAAG---------------------T--TT--TTAG------------------TCAA----------A----TAAA-----------------------TCCTTAGCC--TCTA-------TATCAT-TTTGCTTCTAGATGGCTCCACCCAACGCGGCTGCCTGTACGATCTCGGCCAGACTGAATTT

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droVir3

CCTGGCAGTGGACAGCTTTAAGACATGTAGCCAGCTGCCGCATACGCACTGTGTGACCAAGCTGGAAAATG-------GCAAGTCTGAA---A----ACTAG------------------------T---TTGA------------------TAAA----------A---------------------------------CTTAGCT--TATT-------TATA-T-TTTCTTTTCAGATGGTGCAACAATTCGTGGCTGTTTGTTTGACTTGCCACAGTCCGAGTTT	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
.............................................................................................................................................................................................................................................GATGGTGCAACAATTCGTGGC..............................	21	1	2.00	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................GTGACCAAGCTGGAAAATG-------..................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................CTGTTTGTTTGACTTGCCACAGTC.......	24	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................CTGCCGCATACGCACTGTGT..........................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................AATTCGTGGCTGTTTGTTTGACT.................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................CGCACTGTGTGACCAAGC..................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................CGCACTGTGTGACCAAGCTGGA..............................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................CAACAATTCGTGGCTGTTT.........................	19	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................GTGACCAAGCTGGAAAATG-------AT................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................GCAACAATTCGTGGCTGT...........................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................ACTGTGTGACCAAGCTGGAAAATG-------ATG...............................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................ATACGCACTGTGTGACCAAGCTGGA..............................................................................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................AGCTGCCGCATACGCACTGTGT..........................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................GTTTGACTTGCCACAGTCCGA....	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......AGTGGACAGCTTTAAGACATGT....................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................TTCGTGGCTGTTTGTTTGACTTGC..............	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................CAACAATTCGTGGCTGTTTGTT......................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................CTGTTTGTTTGACTTGCCA............	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................GTTTGTTTGACTTGCCACAGTCCGAGT..	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................TACGCACTGTGTGACCAAGCT.................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................GTAGCCAGCTGCCGCATACGCACTGT............................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................CGCACTGTGTGACCAAGCTG................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................TGTTTGTTTGACTTGCCAC...........	19	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............GCTTTAAGACATGTAGCCAGCTGCCGC.......................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................ATACGCACTGTGTGACCAAGCT.................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................TGTTTGACTTGCCACAGTC.......	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................ACTGTGTGACCAAGCTGGAAA............................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................GTTTGACTTGCCACAGTCCGAGTT.	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................GCAACAATTCGTGGCTGC...........................	18	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................TGTTTGACTTGCCACAGTCCGAGTT.	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................GGTGCAACAATTCGTGGCTGT...........................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................ATTCGTGGCTGTTTGTTTGACTTGCC.............	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
..................................................................................................................................................................................................................................................................TGTTTGTTTGACTTGCCACAGT........	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................TGTAGCCAGCTGCCGCATA....................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................AGACATGTAGCCAGCTGCC.........................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................ATGTAGCCAGCTGCCGCATACGCACT..............................................................................................................................................................................................................................................	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

CCTGGCCATCGAGAGCTTCCAGACCTGCAGTCAGCTGCCACATACGCACTGTGTGACCAGGCTGGAGAACG-------GTAAGCCAGAC---A----ATCGA------------------------TG--TGA-----GTTCC-----C-GGGGAG----------A----GACT-----------------------TTTCAA-------------------ACG-GTTCCTTTCAGATGGTGCTACGGCCCGAGGCTGCCTCTACGACCTGGATCAGACTCAGTTT	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
..............................................CACTGTGTGACCAGGCTGGA..............................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
......................................................................................................................................................................................................TTTCAA-------------------ACG-GTTCCTTTCAGATGGTG............................................	26	1	1.00	1	1	0	0	0	0	0
...............................................ACTGTGTGACCAGGCTGG...............................................................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0
.........................................ATACGCACTGTGTGACCAG....................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0
..............GCTTCCAGACCTGCAGTCAGCT............................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
........................CTGCAGTCAGCTGCCACATACGCA................................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
.....................................CCACATACGCACTGTGTGACCAGGCT.................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
......CATCGAGAGCTTCCAGACCTGCAGT.................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	1	0
......................................CACATACGCACTGTGTGACCAGGCTGGA..............................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................................................................................................AGGCTGCCTCTACGACCTGGATCAGA........	26	1	1.00	1	1	0	0	0	0	0
.........CGAGAGCTTCCAGACCTGCAGT.................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	1

droGri2

TTTGGCAGTTGCCCAATTTAAGACCTGTAACCAGTTCCCGCATCCACAATGTATGACGAGATTGGAGGATG-------GTAAGTGCGAA---A----TCCAG------------------------TA--TTAA------------------TCGA----------T----GCGT-----------------------TTGTT-ATCAATCCC------------T-CAATTTCCCAGATGGTTCAACAATTCGTGGTTGTCTTTATGATCTACCACAGGCGCACTTT	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
....................AGACCTGTAACCAGTTCCCGCATCCACAA...............................................................................................................................................................................................................................................	29	1	1.00	1	1	0

droWil2

CCAAGATGTGAGCACTTTCACCACATGCAGTCAATTGCCGCATACGAATTGTGTAACTCGATTGGAAAGTG-------GTAAGTCTCAATGAG---TGAAAA---------------------------------T-----------AAAAA--TAACCAACACAA-T--------------------CAAAATGCTA------AA------A----C----TTTC-ATTATCCATAGATGGCTCTACCACTCGTGGTTGTCTCACCGATCTTAACCAAAATGATTTT	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
................................AATTGCCGCATACGAATTGT............................................................................................................................................................................................................................................	20	1	14.00	14	0	0	1	13	0
................................AATTGCCGCATACGAATTGTGT..........................................................................................................................................................................................................................................	22	1	13.00	13	0	0	4	9	0
...........GCACTTTCACCACATGCAGTC................................................................................................................................................................................................................................................................	21	1	10.00	10	0	2	4	4	0
..................................................GTGTAACTCGATTGGAAAGT..........................................................................................................................................................................................................................	20	1	10.00	10	0	0	4	6	0
.............ACTTTCACCACATGCAGTC................................................................................................................................................................................................................................................................	19	1	9.00	9	0	0	0	9	0
............CACTTTCACCACATGCAGTC................................................................................................................................................................................................................................................................	20	1	9.00	9	0	0	2	7	0
...............................................ATTGTGTAACTCGATTGGAAAGT..........................................................................................................................................................................................................................	23	1	6.00	6	0	0	1	5	0
.................................................TGTGTAACTCGATTGGAAAGT..........................................................................................................................................................................................................................	21	1	5.00	5	0	0	4	1	0
.................................ATTGCCGCATACGAATTGT............................................................................................................................................................................................................................................	19	1	4.00	4	0	0	1	3	0
.............ACTTTCACCACATGCAGTCA...............................................................................................................................................................................................................................................................	20	1	4.00	4	0	0	0	4	0
.............ACTTTCACCACATGCAGT.................................................................................................................................................................................................................................................................	18	1	4.00	4	0	0	0	4	0
...........GCACTTTCACCACATGCAGT.................................................................................................................................................................................................................................................................	20	1	4.00	4	0	0	1	3	0
............CACTTTCACCACATGCAGT.................................................................................................................................................................................................................................................................	19	1	3.00	3	0	0	0	3	0
...............................CAATTGCCGCATACGAATTGTGT..........................................................................................................................................................................................................................................	23	1	3.00	3	0	0	1	2	0
..................................TTGCCGCATACGAATTGTGT..........................................................................................................................................................................................................................................	20	1	2.00	2	0	0	1	1	0
.............................................................................................................................................................................................................................................GATGGCTCTACCACTCGTGGTTGTC..........................	25	1	2.00	2	0	1	0	1	0
................................AATTGCCGCATACGAATTGTGTAACT......................................................................................................................................................................................................................................	26	1	2.00	2	0	0	0	2	0
.................................ATTGCCGCATACGAATTGTGTAACTC.....................................................................................................................................................................................................................................	26	1	2.00	2	0	0	0	2	0
.................................ATTGCCGCATACGAATTGTGT..........................................................................................................................................................................................................................................	21	1	2.00	2	0	0	1	1	0
........TGAGCACTTTCACCACATGC....................................................................................................................................................................................................................................................................	20	1	2.00	2	0	0	0	2	0
........................................................................................................................................................................................................................................................CACTCGTGGTTGTCTCACC.....................	19	1	2.00	2	0	1	0	1	0
...................................TGCCGCATACGAATTGTGT..........................................................................................................................................................................................................................................	19	1	2.00	2	0	0	0	2	0
................................AATTGCCGCATACGAATTGTG...........................................................................................................................................................................................................................................	21	1	2.00	2	0	0	0	2	0
............................AGTCAATTGCCGCATACGA.................................................................................................................................................................................................................................................	19	1	2.00	2	0	0	0	2	0
..........AGCACTTTCACCACATGCAGTC................................................................................................................................................................................................................................................................	22	1	2.00	2	0	0	0	2	0
....................................................GTAACTCGATTGGAAAGT..........................................................................................................................................................................................................................	18	1	2.00	2	1	0	0	1	0
............................AGTCAATTGCCGCATACGAATTGTGT..........................................................................................................................................................................................................................................	26	1	2.00	2	0	0	0	2	0
............................................CGAATTGTGTAACTCGATTGGA..............................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0
.................................................................................................................................................................................................................................................................TTGTCTCACCGATCTTAACCAAAAT......	25	1	1.00	1	0	0	0	1	0
.................TCACCACATGCAGTCAAT.............................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0
................................................................................................................................................................................................................................................................GTTGTCTCACCGATCTTAACCA..........	22	1	1.00	1	0	1	0	0	0
................................................TTGTGTAACTCGATTGGAAAG...........................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0
..................................................GTGTAACTCGATTGGAAAGTG-------..................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	1	0
.......................................................................................................................................................................................................................................................................CACCGATCTTAACCAAAAT......	19	1	1.00	1	0	0	0	1	0
..................................................................................................................................................................................................GCTA------AA------A----C----TTTC-ATTATCCATAG..................................................	23	1	1.00	1	0	1	0	0	0
.......................CATGCAGTCAATTGCCGC.......................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0
........................................................................................................................................................................................................................................................CACTCGTGGTTGTCTCACCGAT..................	22	1	1.00	1	0	0	0	1	0
................................AATTGCCGCATACGAATTG.............................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0
..............................................................................................................................................................................................................................................ATGGCTCTACCACTCGTGGT..............................	20	1	1.00	1	0	0	1	0	0
...................................................TGTAACTCGATTGGAAAG...........................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0
....................................GCCGCATACGAATTGTGTA.........................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0
...........................................ACGAATTGTGTAACTCGATT.................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0
....................................GCCGCATACGAATTGTGTAACTC.....................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	1	0
........................................................................................................................................................................................................................................................CACTCGTGGTTGTCTCACCGATCTTAAC............	28	1	1.00	1	0	1	0	0	0
..................CACCACATGCAGTCAATTGCCGC.......................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	1	0
....................................................................................................................................................................................................................................................................TCTCACCGATCTTAACCAA.........	19	1	1.00	1	0	0	0	1	0
..................................................................................................................................................................................................................................................CTCTACCACTCGTGGTTGTCTCACCGAT..................	28	1	1.00	1	0	0	1	0	0
............................AGTCAATTGCCGCATACGAATTGT............................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	1	0
................................................TTGTGTAACTCGATTGGAAAGT..........................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0
...............................CAATTGCCGCATACGAATTGTG...........................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	1	0
..............................................AATTGTGTAACTCGATTGGAAAGT..........................................................................................................................................................................................................................	24	1	1.00	1	0	0	1	0	0
.................................ATTGCCGCATACGAATTGTG...........................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0
.................................ATTGCCGCATACGAATTGTGTAACTCG....................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	1	0
............................AGTCAATTGCCGCATACG..................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0
...AGATGTGAGCACTTTCACCACATGCAGT.................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	1	0
.............................GTCAATTGCCGCATACGA.................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0
.............................................GAATTGTGTAACTCGATTGGAAAGT..........................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0
....................CCACATGCAGTCAATTGCC.........................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0
......................................................................................................................................................................................................................................................ACCACTCGTGGTTGTCTCACCGAT..................	24	1	1.00	1	0	0	0	1	0
............................................CGAATTGTGTAACTCGATTG................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0
.................................ATTGCCGCATACGAATTGTGTA.........................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	1	0
...............TTTCACCACATGCAGTCA...............................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0
...AGATGTGAGCACTTTCACC..........................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0
................................AATTGCCGCATACGAATTGTGTAACTCG....................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	1	0
..AAGATGTGAGCACTTTCACCAC........................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	1	0
..................................................................................................................................................................................................................................................................TGTCTCACCGATCTTAACCAA.........	21	1	1.00	1	0	0	0	1	0
.............................GTCAATTGCCGCATACGAATTGTGTA.........................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	1	0
...................................TGCCGCATACGAATTGTG...........................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0
..................................................GTGTAACTCGATTGGAAA............................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0
.................TCACCACATGCAGTCAATTGCCGCA......................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	1	0
............................................CGAATTGTGTAACTCGATTT................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0
.......................................................................................................................................................................................................................................................................CACCGATCTTAACCAAAATG.....	20	1	1.00	1	0	0	1	0	0
...............................................ATTGTGTAACTCGATTGGAA.............................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0
.........................................ATACGAATTGTGTAACTCGATTGG...............................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0
.................................ATTGCCGCATACGAATTGTGTAACT......................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	1	0
..................................TTGCCGCATACGAATTGT............................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0
..................................................................................................................................................................................................................................................................TGTCTCACCGATCTTAACCA..........	20	1	1.00	1	0	0	0	1	0
.........GAGCACTTTCACCACATGCAGTC................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0
.........................................ATACGAATTGTGTAACTCGATT.................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	1	0
................................AATTGCCGCATACGAATTGTGTA.........................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	1	0
...............................................ATTGTGTAACTCGATTGGAAAG...........................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	1	0
..............CTTTCACCACATGCAGTC................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0
..AAGATGTGAGCACTTTCACCACA.......................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	1	0
...............................................ATTGTGTAACTCGATTGG...............................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0
....................................GCCGCATACGAATTGTGTAACTCGAT..................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0
.......................................................................................................................................................................................................................................................CCACTCGTGGTTGTCTCACC.....................	20	1	1.00	1	0	0	0	1	0
...................................TGCCGCATACGAATTGTGTA.........................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0
.............................................................................................................................................................................................................................................GATGGCTCTACCACTCGTGGTTGTCT.........................	26	1	1.00	1	0	1	0	0	0
.................TCACCACATGCAGTCAATTGCCGC.......................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	1	0
.............................................GAATTGTGTAACTCGATTGGAAAGTG-------..................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	1	0

dp5

CCAGGCCGTCGGCAGCTTCGACACCTGCAGCCAAATGCCGCATACCGGCTGTGTCACGCGCCTTCTGAGCG-------GCAAGTACAGC---C----GCATA-----------------------------TCAATTAG-----------GG------------------------------------CCCAATGCTA------AT------C----TTTTTTCTCCTCCTCTGGCAGATGGTGCCACCACACGAGGATGTCTGTACGACCAGGAACAGTCCGACTTT	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
.............................................................................................................................................................................................................................................................GAGGATGTCTGTACGACCAGGAACA..........	25	1	6.00	6	0	5	0	0	0	0	0	0	0	1
...............................................................................................................................................................................................................................................................GGATGTCTGTACGACCAGGAAC...........	22	1	5.00	5	0	4	1	0	0	0	0	0	0	0
..............................................GGCTGTGTCACGCGCCTTCTGAGC..........................................................................................................................................................................................................................	24	1	5.00	5	0	5	0	0	0	0	0	0	0	0
..................................................GTGTCACGCGCCTTCTGAGC..........................................................................................................................................................................................................................	20	1	4.00	4	0	4	0	0	0	0	0	0	0	0
...GGCCGTCGGCAGCTTCGA...........................................................................................................................................................................................................................................................................	18	1	4.00	4	0	4	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................GATGTCTGTACGACCAGGAACA..........	22	1	3.00	3	0	3	0	0	0	0	0	0	0	0
......CGTCGGCAGCTTCGACACCTGC....................................................................................................................................................................................................................................................................	22	1	3.00	3	0	2	0	0	1	0	0	0	0	0
...GGCCGTCGGCAGCTTCGACACCTGC....................................................................................................................................................................................................................................................................	25	1	3.00	3	0	1	2	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................GGATGTCTGTACGACCAGGAACA..........	23	1	3.00	3	0	3	0	0	0	0	0	0	0	0
.................................................TGTGTCACGCGCCTTCTGAGC..........................................................................................................................................................................................................................	21	1	3.00	3	0	3	0	0	0	0	0	0	0	0
................................................CTGTGTCACGCGCCTTCTGAGC..........................................................................................................................................................................................................................	22	1	3.00	3	0	3	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................CACCACACGAGGATGTCTGTAC.....................	22	1	3.00	3	0	2	1	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................GTCTGTACGACCAGGAACA..........	19	1	2.00	2	0	2	0	0	0	0	0	0	0	0
................................................CTGTGTCACGCGCCTTCTGAGCG-------ATG...............................................................................................................................................................................................................	26	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.........................................ATACCGGCTGTGTCACGCGC...................................................................................................................................................................................................................................	20	1	2.00	2	0	2	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................CACGAGGATGTCTGTACGACCAG...............	23	1	2.00	2	0	1	1	0	0	0	0	0	0	0
.......GTCGGCAGCTTCGACACCTGCAGCC................................................................................................................................................................................................................................................................	25	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.......GTCGGCAGCTTCGACACCTGC....................................................................................................................................................................................................................................................................	21	1	2.00	2	0	1	0	1	0	0	0	0	0	0
....................................................GTCACGCGCCTTCTGAGCG-------ATG...............................................................................................................................................................................................................	22	2	2.00	4	0	4	0	0	0	0	0	0	0	0
......CGTCGGCAGCTTCGACACCTGCAGC.................................................................................................................................................................................................................................................................	25	1	2.00	2	0	1	1	0	0	0	0	0	0	0
.......GTCGGCAGCTTCGACACCTGCAGC.................................................................................................................................................................................................................................................................	24	1	2.00	2	0	2	0	0	0	0	0	0	0	0
...GGCCGTCGGCAGCTTCGAC..........................................................................................................................................................................................................................................................................	19	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................CTGTACGACCAGGAACAGTCC......	21	1	2.00	2	0	2	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................TGTCTGTACGACCAGGAACA..........	20	1	2.00	2	0	2	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................CGACCAGGAACAGTCCGAC...	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......................................CGCATACCGGCTGTGTCACGCG....................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................GATGGTGCCACCACACGAGGATGTCTGTA......................	29	1	1.00	1	0	0	1	0	0	0	0	0	0	0
....................................................GTCACGCGCCTTCTGAGC..........................................................................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......................................GCATACCGGCTGTGTCACGCGCCT.................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................CTGTACGACCAGGAACAGTCCGAC...	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................ACCACACGAGGATGTCTGTACGACCAG...............	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................GATGGTGCCACCACACGAGGATGTC..........................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........................................CATACCGGCTGTGTCACGCGCC..................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................GACCAGGAACAGTCCGACTT.	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................GATGTCTGTACGACCAGGAACAGTC.......	25	1	1.00	1	0	0	0	0	1	0	0	0	0	0
.................................................................................................................................................................................................................................................GTGCCACCACACGAGGATGTCTG........................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................................................TGTGTCACGCGCCTTCTG.............................................................................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................................ATACCGGCTGTGTCACGCGCCTTCT..............................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................ATGTCTGTACGACCAGGAAC...........	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0
.......................................GCATACCGGCTGTGTCACGC.....................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	1	0	0	0	0	0
..........................................................................................................................................................................................................................................................CACGAGGATGTCTGTACGACCA................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................GAGGATGTCTGTACGACCAGG..............	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................CCGCATACCGGCTGTGTCACGCGC...................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................CGACACCTGCAGCCAAATGCC.........................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...GGCCGTCGGCAGCTTCGACACCTGCA...................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................GATGTCTGTACGACCAGGA.............	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................CCAAATGCCGCATACCGGCTGTGTCACG......................................................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...GGCCGTCGGCAGCTTCGACACCTG.....................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................GTCTGTACGACCAGGAACAG.........	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................GTGCCACCACACGAGGATGTCT.........................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................GACACCTGCAGCCAAATGC..........................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................ATGTCTGTACGACCAGGAACAG.........	22	1	1.00	1	0	0	0	0	1	0	0	0	0	0
.................................................................................................................................................................................................................................................................ATGTCTGTACGACCAGGAA............	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................................................CTGTGTCACGCGCCTTCTGAGCG-------..................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................................................TGTGTCACGCGCCTTCTGAGCG-------ATG...............................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...GGCCGTCGGCAGCTTCGACACCT......................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................GACCAGGAACAGTCCGACT..	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................CACGAGGATGTCTGTACGACCAGGAACA..........	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...............................................GCTGTGTCACGCGCCTTCTGAGC..........................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................................GTGTCACGCGCCTTCTGAG...........................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................ACACGAGGATGTCTGTACGACCAGG..............	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................ATGTCTGTACGACCAGGAACA..........	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................GATGGTGCCACCACACGAGG...............................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................GTGCCACCACACGAGGATGTCTGTAC.....................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................GGATGTCTGTACGACCAGGA.............	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......................................CGCATACCGGCTGTGTCACGCGCC..................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................AGGATGTCTGTACGACCAGGAACA..........	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........................................TACCGGCTGTGTCACGCGCCTTCTGA............................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................GCCACCACACGAGGATGTCTGTAC.....................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................CCACACGAGGATGTCTGTACGACC.................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.CAGGCCGTCGGCAGCTTCGACACCTGCA...................................................................................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................CACCACACGAGGATGTCTGTA......................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................TGGTGCCACCACACGAGGATGTCTG........................	25	1	1.00	1	0	0	0	0	0	0	1	0	0	0
...................................................TGTCACGCGCCTTCTGAGC..........................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................................................TGTGTCACGCGCCTTCTGAG...........................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................AGGATGTCTGTACGACCAGGAAC...........	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................GCCAAATGCCGCATACCGGCTGTGTCA........................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................GCCAAATGCCGCATACCGGCTGT............................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................CGAGGATGTCTGTACGACCAGGAACA..........	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................GCCACCACACGAGGATGTCTGTACGA...................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................ACCACACGAGGATGTCTGTAC.....................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....GCCGTCGGCAGCTTCGACACCTGCA...................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................AGCCAAATGCCGCATACCGGC...............................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................TTCGACACCTGCAGCCAAATGCCGC.......................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................CGAGGATGTCTGTACGACCAGGAA............	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................ATGGTGCCACCACACGAGGATGT...........................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................GCCACCACACGAGGATGT...........................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................GTGCCACCACACGAGGATGTCTGTA......................	25	1	1.00	1	0	0	0	0	1	0	0	0	0	0
................................................................................................................................................................................................................................................................GATGTCTGTACGACCAGGAAC...........	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...............................CAAATGCCGCATACCGGCTGTGTCACGC.....................................................................................................................................................................................................................................	28	1	1.00	1	0	0	1	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................CACGAGGATGTCTGTACGACCAGGAAC...........	27	1	1.00	1	0	0	0	0	0	0	1	0	0	0
.............AGCTTCGACACCTGCAGCCAAATGCCGC.......................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	1	0	0	0	0	0	0	0
.........................TGCAGCCAAATGCCGCATACCGGCT..............................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................CACGAGGATGTCTGTACGACCAGG..............	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........................................CATACCGGCTGTGTCACGCGC...................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................ATGCCGCATACCGGCTGTGTCACGCGCC..................................................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................TTTTCTCCTCCTCTGGCAG..................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................AGCCAAATGCCGCATACCGGCTGTG...........................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0

droPer2

CCAGGCCGTCGGCAGCTTCGACACCTGCAGCCAAATGCCGCATACCGGCTGTGTCACGCGTCTTCTGAGCG-------GCAAGTACAGC---C----GCATA-----------------------------TCAATTAG-----------GG------------------------------------CCCAATGCTA------AT------C----TTTGCTCTCCTCCTCTGGCAGATGGTGCCACCACACGAGGATGTCTGTACGACCAGGAACAGTCCGACTTT	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
....................................................GTCACGCGTCTTCTGAGC..........................................................................................................................................................................................................................	18	1	10.00	10	10	0	0	0	0	0
.......GTCGGCAGCTTCGACACCTGC....................................................................................................................................................................................................................................................................	21	1	7.00	7	7	0	0	0	0	0
.........................................ATACCGGCTGTGTCACGCGTCTTCTGAGC..........................................................................................................................................................................................................................	29	1	5.00	5	5	0	0	0	0	0
.................................................TGTGTCACGCGTCTTCTGAGC..........................................................................................................................................................................................................................	21	1	4.00	4	4	0	0	0	0	0
.................................................................................................................................................................................................................................................................ATGTCTGTACGACCAGGAACA..........	21	1	3.00	3	3	0	0	0	0	0
.........................................ATACCGGCTGTGTCACGCGTCTTCTGAG...........................................................................................................................................................................................................................	28	1	3.00	3	3	0	0	0	0	0
..................................................GTGTCACGCGTCTTCTGAG...........................................................................................................................................................................................................................	19	1	3.00	3	0	0	2	0	0	1
.............................................................................................................................................................................................................................................................GAGGATGTCTGTACGACCAGGAACA..........	25	1	3.00	3	3	0	0	0	0	0
..................................................GTGTCACGCGTCTTCTGAGCG-------ATG...............................................................................................................................................................................................................	24	1	2.00	2	0	0	2	0	0	0
..............................................GGCTGTGTCACGCGTCTTCTGAGC..........................................................................................................................................................................................................................	24	1	2.00	2	0	2	0	0	0	0
.................................................................................................................................................................................................................................................................ATGTCTGTACGACCAGGAACAGTC.......	24	1	2.00	2	2	0	0	0	0	0
.........................................ATACCGGCTGTGTCACGCGTC..................................................................................................................................................................................................................................	21	1	2.00	2	2	0	0	0	0	0
..........................................................................................................................................................................................................................................................CACGAGGATGTCTGTACGACCAGGAAC...........	27	1	2.00	2	2	0	0	0	0	0
.................................................................................................................................................................................................................................................................ATGTCTGTACGACCAGGAAC...........	20	1	2.00	2	1	1	0	0	0	0
...........................................................................................................................................................................................................................................................ACGAGGATGTCTGTACGACCAGGAACA..........	27	1	2.00	2	2	0	0	0	0	0
...............................................................................................................................................................................................................................................................GGATGTCTGTACGACCAGGAACAGTC.......	26	1	2.00	2	2	0	0	0	0	0
..................................................GTGTCACGCGTCTTCTGAGC..........................................................................................................................................................................................................................	20	1	2.00	2	0	2	0	0	0	0
......CGTCGGCAGCTTCGACACCTGC....................................................................................................................................................................................................................................................................	22	1	2.00	2	0	0	2	0	0	0
.............................................................................................................................................................................................................................................................GAGGATGTCTGTACGACCAGGAAC...........	24	1	2.00	2	2	0	0	0	0	0
.........................................ATACCGGCTGTGTCACGC.....................................................................................................................................................................................................................................	18	1	2.00	2	2	0	0	0	0	0
.....................................CCGCATACCGGCTGTGTCA........................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0
....................................................GTCACGCGTCTTCTGAGCG-------..................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0
.........CGGCAGCTTCGACACCTG.....................................................................................................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0
.............................................................CTTCTGAGCG-------GCAAGTACAGC---....................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0
.........................................ATACCGGCTGTGTCACGCGTCTTCTGG............................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
....................................GCCGCATACCGGCTGTGTCA........................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0
..........GGCAGCTTCGACACCTGCA...................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0
.......................................................................................................................................................................................................................................................................GTACGACCAGGAACAGTCC......	19	1	1.00	1	0	0	0	0	0	1
.........CGGCAGCTTCGACACCTGCAGCC................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0
......................................CGCATACCGGCTGTGTCAC.......................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0
.................................................................................................................................................................................................................................................GTGCCACCACACGAGGATGTCTGTAC.....................	26	1	1.00	1	1	0	0	0	0	0
........................................................................................................................................................................................................................................................................TACGACCAGGAACAGTCC......	18	1	1.00	1	0	1	0	0	0	0
.............................................................................................................................................................................................................................................................GAGGATGTCTGTACGACCAGGAACAGTC.......	28	1	1.00	1	1	0	0	0	0	0
.................................................TGTGTCACGCGTCTTCTGAG...........................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0
.............AGCTTCGACACCTGCAGCCAAATGC..........................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0
....................................GCCGCATACCGGCTGTGTCACGC.....................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0
..........................................................................................................................................................................................................................................................................CGACCAGGAACAGTCCGA....	18	1	1.00	1	0	1	0	0	0	0
............................................................................................................................................................................................................................................................CGAGGATGTCTGTACGACCAGGAAC...........	25	1	1.00	1	0	0	0	0	0	1
................................................CTGTGTCACGCGTCTTCTGA............................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
................................................................................................................................................................................................................................................................GATGTCTGTACGACCAGGA.............	19	1	1.00	1	0	1	0	0	0	0
....GCCGTCGGCAGCTTCGACAC........................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0
.............................................................................................................................................................................................................................................GATGGTGCCACCACACGAGG...............................	20	1	1.00	1	0	1	0	0	0	0
..................................................GTGTCACGCGTCTTCTGAGCG-------..................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
...GGCCGTCGGCAGCTTCGA...........................................................................................................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0
.......................................GCATACCGGCTGTGTCACGG.....................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
...GGCCGTCGGCAGCTTCGACACCT......................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0
....................................................GTCACGCGTCTTCTGAGCG-------ATG...............................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
...........................................................................................................................................................................................................................................................................GACCAGGAACAGTCCGACT..	19	1	1.00	1	1	0	0	0	0	0
..................................................................................................................................................................................................................................................................TGTCTGTACGACCAGGAACA..........	20	1	1.00	1	0	1	0	0	0	0
...GGCCGTCGGCAGCTTCGACACC.......................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
...................................................................................................................................................................................................................................................GCCACCACACGAGGATGTCTGTA......................	23	1	1.00	1	0	0	1	0	0	0
.........................................ATACCGGCTGTGTCACGCGT...................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................................................................................................CGAGGATGTCTGTACGACCAGGAA............	24	1	1.00	1	0	0	0	0	0	1
..................................................GTGTCACGCGTCTTCTGG............................................................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................................................................................................................................CCACCACACGAGGATGTCTGTA......................	22	1	1.00	1	0	0	1	0	0	0
..........................................TACCGGCTGTGTCACGCGTCTTCTGAGC..........................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0
...........................................ACCGGCTGTGTCACGCGTCTTCTGAGC..........................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
......................................CGCATACCGGCTGTGTCACG......................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0
...................GACACCTGCAGCCAAATGCCGC.......................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
................................................CTGTGTCACGCGTCTTCTG.............................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0

droAna3

CACTGCCGTGGGCACCTTCAACACCTGCAGTCAGATGCCACATACGGGCTGTGTCACTAGATTGGAAAGCG-------GTGAGTTCTGA---G----GCCT------------------------------TCA------------------TTAA----------ATATT----AA-----------AACATA----------AC------CTATAATATTTCTA-CAATTTCCTAGACGGAGCCACCACTCGAGGCTGTTTGTATGACCTTGGTCAGTCAGAGTTT	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
.............................GTCAGATGCCACATACGGGCTGTGT..........................................................................................................................................................................................................................................	25	1	2.00	2	0	0	0	0	2	0
......................................CACATACGGGCTGTGTCACTAGATT.................................................................................................................................................................................................................................	25	1	2.00	2	0	1	0	0	1	0
................................................................................................................................................................................................................................................................GCTGTTTGTATGACCTTGGT............	20	1	2.00	2	1	1	0	0	0	0
.............................GTCAGATGCCACATACGGGC...............................................................................................................................................................................................................................................	20	1	2.00	2	0	2	0	0	0	0
.................................................TGTGTCACTAGATTGGAAAGC..........................................................................................................................................................................................................................	21	1	2.00	2	0	1	0	0	1	0
.....................................................................................................................................................................................................................................................CACCACTCGAGGCTGTTTGT.......................	20	1	2.00	2	0	0	0	0	2	0
.............ACCTTCAACACCTGCAGTCAGATG...........................................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
........................................CATACGGGCTGTGTCACTAGATTGGAAA............................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	1	0
..................................................................................................................................................................................................................................................AGCCACCACTCGAGGCTGTTTGC.......................	23	1	1.00	1	0	1	0	0	0	0
.........................................................................................................................................................................................................................................................ACTCGAGGCTGTTTGTATG....................	19	1	1.00	1	0	1	0	0	0	0
...TGCCGTGGGCACCTTCAACACCTGCAGTC................................................................................................................................................................................................................................................................	29	1	1.00	1	0	1	0	0	0	0
.........................................ATACGGGCTGTGTCACTAG....................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1	0
............................AGTCAGATGCCACATACGGG................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0
........................................CATACGGGCTGTGTCACTAGATTGG...............................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................................................................................................................................................GTTTGTATGACCTTGGTCAGTC.......	22	1	1.00	1	1	0	0	0	0	0
................................................................................................................................................................................................................................................................GCTGTTTGTATGACCTTGGTCAGT........	24	1	1.00	1	0	1	0	0	0	0
..........................................TACGGGCTGTGTCACTAGA...................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0
....................................................GTCACTAGATTGGAAAGCG-------A.................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0
...................................TGCCACATACGGGCTGTGTC.........................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0
.............................................................................................................................................................................................................................................GACGGAGCCACCACTCGAGGCT.............................	22	1	1.00	1	0	1	0	0	0	0
..................................................................................................................................................................................................................................................AGCCACCACTCGAGGCTGTT..........................	20	1	1.00	1	1	0	0	0	0	0
...........GCACCTTCAACACCTGCAGTC................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0
....................................................................................................................................................................................................................................................CCACCACTCGAGGCTGTTTGC.......................	21	1	1.00	1	0	1	0	0	0	0
................................................................................................................................................................................................................................................................GCTGTTTGTATGACCTTGGTCAGTCA......	26	1	1.00	1	0	0	0	0	1	0
..................................................................................................................................................................................................................................................................TGTTTGTATGACCTTGGTCAGTCAGA....	26	1	1.00	1	0	1	0	0	0	0
............................AGTCAGATGCCACATACGGGCTGTGTCA........................................................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0
....................................................GTCACTAGATTGGAAAGC..........................................................................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0
.........................................ATACGGGCTGTGTCACTAGATTGG...............................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
.........................................................................................................................................................................................................................................................ACTCGAGGCTGTTTGTATGACCTT...............	24	1	1.00	1	1	0	0	0	0	0
..............CCTTCAACACCTGCAGTC................................................................................................................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0
...............................CAGATGCCACATACGGGCTGTGTC.........................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0
............CACCTTCAACACCTGCAGTC................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................................................................................................................................................GTTTGTATGACCTTGGTCAGTCAGA....	25	1	1.00	1	0	1	0	0	0	0
.................................GATGCCACATACGGGCTGTGTCACT......................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0
............CACCTTCAACACCTGCAGTCAGATGC..........................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0
...............................................................................................................................................................................................................................................CGGAGCCACCACTCGAGGCC.............................	20	1	1.00	1	0	1	0	0	0	0
..................................................GTGTCACTAGATTGGAAAGCG-------A.................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	1	0
......................................................CACTAGATTGGAAAGCG-------AC................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1	0
.....................................................................................................................................................................................................................................................CACCACTCGAGGCTGTTT.........................	18	1	1.00	1	0	1	0	0	0	0
...............................CAGATGCCACATACGGGCTGTGT..........................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	1	0

droBip1

CACTGCCATAGGCACCTTCAACACCTGCAGTCAGATGCCACATACGGGCTGTGTTACCAAATTGGAAAACG-------GTGAGTTCTGA---G----TCT-------------------------------TAG------------------TTTA----------ATAAT----AA-----------AACAAT----ATTTTAAACA------------ATTGTA-CTGTTTCCTAGACGGAGCCACAACTCGAGGCTGTTTGTATGATCTTGGTCAGTCTGAGTTC	Size	Hit Count	Total Norm	Total
No Reads

droKik1

CCAGTCAGTGGGCAGCTTCCAGACCTGCAGCCAGATGCCGCACACGGGATGCTTCACCAAGCTGGAGGACGGTGAGTT----ATCTGGG---C----GGCGGG--------------AC--G-CATCA-TCACAATT-------------------------TCA-----------A---------------ATTGA-------ACT--CCTT-------TATCTT-TTTCTTTAAAGATGGTTCCACCAACCGTGGCTGCCTTTACGATCTGGACCAGACACCGTTT	Size	Hit Count	Total Norm	Total
No Reads

droFic1

TACTGCCATCGGCAATTTCGAGACCTGCAGCCAGTTGCCGCACACCGGATGTTACACCAAATTGGAGGACG-------GTGAGTTTAGC---A----TGATAA------------------AC-TT-TTTCTGATTT-------------------------TCA-----------A------------------------ATAATTTATGTT-------TAAAA--TTATGTTTCAGATGGTTCCACTAACCGTGGTTGCCTGTACAATCTTGGCCAGTCTGAATTC	Size	Hit Count	Total Norm	Total
No Reads

droEle1

CACGAAGATCACTCTGATAGGAAATTGTGGAGTCTTGCCCTATACAAGTTGTCAGACGCGTGTCAGAAG----------TAAGTGAACT---TACCTTAAAA-CATTGCAAGCTAGCTCGAAT-TT-CTTGTGATTTGA----AACTAGATT--GGTCTAGTCGTA-TTTT----GA-----------ACTAATGA----------------TTGTACTATCTC-C-ATTCTTTTTAGATGGCATCACCCAGCGCAGTTGTCTGAGCAGTTTGCCTCGTGAACAGTTA	Size	Hit Count	Total Norm	Total
No Reads

droRho1

CTCAAAGATCACTCTCATAGGACATTGTGGAATCTTGCCCTATTCTAGCTGCCAGACACGTGTCAGAG----------GTGAGTTGAGA---TACCCTAAAA-CCTTTAGACTTAGCTTGAAC-TT-CTTCCAG-TTAA----AGCTAGATC--TCCCCAGTCTTA-TCAA----GA-----------ACTAATGA----------------CTTAAATTCCTCCG-TATCTTTCTAGATGGCATAACCCAGCGTAGTTGCCTTAGCAGTTTGCCCCGCGAACAGTTG	Size	Hit Count	Total Norm	Total
No Reads

droBia1

CCAGGCCATAGGAGTCTTTGAAACATGCAGCCAGCTGCCCCACACCGGATGCTTCACCAAGTTGGAGGATG-------GTAAGTCAAGA---A----AA--GG--------------------T--TT--TTAAACTGG-----------GGGAAGGCTATTTCT-----------A---------------------------ACAAATCTCTTT----AATATC-GCCTCTTTCAGACGGTTCCACCAACCGTGGTTGCCTGTACGACCTCGGCCAGTCTGAATTC	Size	Hit Count	Total Norm	Total
No Reads

droTak1

CGAGGCCGTGGGTGTCTTTGCCACCTGCAGCCAGTTGCCCCACACGGGATGCTTTACCAAATTGGAGGATG-------GTGAGTTTAGT---G----------------------------------------------------------------------------------------------------------------------------------------------------GCGCAACATGTCATATCTATAT-------------------------	Size	Hit Count	Total Norm	Total
No Reads

droEug1

CCATGCCATTGGAAACTTCGAAACCTGCAGTCAGTTGCCGCACACAGGATGCTACACCAAATTGGAGAGTG-------GTAAGTTTAGA---C----AAATAG------------------AGT--GT--TTCC--------T-----T--------------------------GAGTAAATAATTAAATATTGGT------AATC------------------C-CTCTTCCTTAGATGGTTCCACCAACCGTGGTTGCCTCTACAATCTTGGCCAGTCTGAGTTT	Size	Hit Count	Total Norm	Total
No Reads

dm3

CTACGCCATTGGAACCTTCAGCACCTGCAGTCAGTTGCCCCACACAGGATGCTTCACCAGATTGGAGAACG-------GTACGTTTGGA---A----AGAAGG--------------------T--TT--TCAG------------------TCAA----------A----GATT-----------------------TCCTTAATCAATCCA-------TATATA-CTTCTTCCTAGATGGTTCAACCCAACGTGGCTGCCTGTACGATCTCGACCAGACTGATTTT	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
.......................................................................................................................................................................................................................................................................GTACGATCTCGACCAGACT......	19	1	7.00	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................CAACGTGGCTGCCTGTAC.....................	18	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................TGCCCCACACAGGATGCTTCACCA.....................................................................................................................................................................................................................................	24	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................CAACCCAACGTGGCTGCCT.........................	19	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................TCAACCCAACGTGGCTGCCT.........................	20	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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.................................GTTGCCCCACACAGGATGCTT..........................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................GTTTGGA---A----AGAAGG--------------------T--TT--G.............................................................................................................................................................	18	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................GTGGCTGCCTGTACGATCATC..............	21	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSim2

CCAGGCCATTGGAACCTTCAGCACCTGCAGTCAGTTGCCCCACACAGGATGCTTCACCAGATTGGAGAATG-------GTACGTTTGGA---A----AAAAGG--------------------T--TT--TTAG------------------TCAG----------A----GATT-----------------------TTCTTAATCCATCCA-----------TA-CTCTTTCCTAGATGGTTCAACCCAACGTGGCTGCCTGTACGATCTCGACCAGACTGATTTT	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
.......................................................................................................................................................................................................................................................................GTACGATCTCGACCAGACT......	19	1	6.00	6	0	1	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................AACGTGGCTGCCTGTACGATCTCGACCA..........	28	1	3.00	3	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................ACAGGATGCTTCACCAGATTG................................................................................................................................................................................................................................	21	1	3.00	3	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................GCCTGTACGATCTCGACCAGAC.......	22	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................ACCCAACGTGGCTGCCTGTACGATCT................	26	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................GGCTGCCTGTACGATCTCGACC...........	22	1	2.00	2	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................CTGTACGATCTCGACCAGACT......	21	1	2.00	2	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................GCCTGTACGATCTCGACC...........	18	1	2.00	2	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................ACCCAACGTGGCTGCCTGTAC.....................	21	1	2.00	2	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................CAACGTGGCTGCCTGTACGATCTCGACC...........	28	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................GCCTGTACGATCTCGACCAGACT......	23	1	2.00	2	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................AACGTGGCTGCCTGTACGATCTC...............	23	1	2.00	2	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................GTTGCCCCACACAGGATGCTT..........................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
................................................................................................................................................................................................................................................GGTTCAACCCAACGTGGCTGCCTGTAC.....................	27	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................GTTCAACCCAACGTGGCTGCCTGTACGAT..................	29	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................CAACGTGGCTGCCTGTACGATCTC...............	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................ATGCTTCACCAGATTGGA..............................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................CTGCCTGTACGATCTCGACCAGACT......	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................GGCTGCCTGTACGATCTCGACCAGACT......	27	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................ACGTGGCTGCCTGTACGATCT................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................TGCCTGTACGATCTCGACCAGACT......	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................GGCTGCCTGTACGATCTCGACCAGAC.......	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................GTGGCTGCCTGTACGATCTCGACC...........	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................CCCAACGTGGCTGCCTGTA......................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................TGGCTGCCTGTACGATCTCG..............	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................CAACCCAACGTGGCTGCCTGTA......................	22	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................TGCCTGTACGATCTCGAC............	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................AACCCAACGTGGCTGCCTGTACGA...................	24	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................TGCCTGTACGATCTCGACCAGA........	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................CGTGGCTGCCTGTACGATCTCGACC...........	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................CCCAACGTGGCTGCCTGTACG....................	21	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................CTGCCTGTACGATCTCGA.............	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................TTCAACCCAACGTGGCTGC...........................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................AACGTGGCTGCCTGTACGATCTCGAC............	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................TGTACGATCTCGACCAGACT......	20	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................AACGTGGCTGCCTGTACGATCTCGACC...........	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................TGCCTGTACGATCTCGACCAGAC.......	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................GATCTCGACCAGACTGATTTT	21	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................CAACGTGGCTGCCTGTACGATCTCGA.............	26	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................GATGCTTCACCAGATTGGA..............................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................GTACGATCTCGACCAGAC.......	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSec2

CCAGGCCATTGGAACCTTCAGCACCTGCAGTCAGTTGCCCCACACAGGATGCTTCACCAGATTGGAGAATG-------GTACGTTTGAA---A----AGAAGG--------------------T--TT--TTAG------------------TCAA----------A----TATT-----------------------TCTTTAATCCAGCCA-------TATATA-CTTTTTCCTAGATGGTTCAACCCAACGTGGCTGCCTGTACGATCTCGACCAGACTGATTTT	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
...........................................ACAGGATGCTTCACCAGATTGGAGA............................................................................................................................................................................................................................	25	1	2.00	2	0	1	1	0
..AGGCCATTGGAACCTTCAGC..........................................................................................................................................................................................................................................................................	20	1	2.00	2	1	0	1	0
.............................................AGGATGCTTCACCAGATTGGAGA............................................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0
..........................................CACAGGATGCTTCACCAGATTGGAGA............................................................................................................................................................................................................................	26	1	1.00	1	0	0	1	0
..AGGCCATTGGAACCTTCAGCACCTGC....................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0
...GGCCATTGGAACCTTCAGC..........................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0
.......................................................................................................................................................................................................................................................CCCAACGTGGCTGCCTGTACGATC.................	24	1	1.00	1	1	0	0	0
................................AGTTGCCCCACACAGGATGCT...........................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0
...................................................................................................................................................................................................................................................................GCCTGTACGATCTCGACCAGACT......	23	1	1.00	1	0	0	1	0
.............................................AGGATGCTTCACCAGATTGGA..............................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0
..........................................CACAGGATGCTTCACCAGATTGG...............................................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0
......CATTGGAACCTTCAGCACCTGCA...................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0
.............................GTCAGTTGCCCCACACAGGATGCTT..........................................................................................................................................................................................................................................	25	1	1.00	1	0	0	1	0
.....................................................................................................................................................................................................................................................AACCCAACGTGGCTGCCTGTACGATCTC...............	28	1	1.00	1	1	0	0	0
.......................................................................................................................................................................................................................................................................GTACGATCTCGACCAGACTGA....	21	1	1.00	1	0	0	1	0
..............................................GGATGCTTCACCAGATTGGA..............................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0
.................................GTTGCCCCACACAGGATGCT...........................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0
.........................................ACACAGGATGCTTCACCAGATTGGA..............................................................................................................................................................................................................................	25	1	1.00	1	0	0	1	0
...............................................GATGCTTCACCAGATTGGAGA............................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0
.............................GTCAGTTGCCCCACACAGGATG.............................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0
..........................................CACAGGATGCTTCACCAGATTGGA..............................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0
........................................................................................................................................................................................................................................................CCAACGTGGCTGCCTGTACG....................	20	1	1.00	1	0	0	1	0
.....CCATTGGAACCTTCAGCACCTG.....................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0

droYak3

CCTGGCTATTGGTACCTTCAACACCTGCAGTCAGTTGCCCCACACAGGATGCTACACCAGATTGGAGAATG-------GTATGTACACC---A----AGAAGT--------------------T--TC--TTAG------------------TCAT----------A----TATT-----------------------TCCTTAACCAATCTT-------TATAAC-TTTTCTTCTAGATGGTTCCACCCAGCGTGGCTGCCTGTACGATCTTGGCCAGACCGATTTT	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
.....................................................................................................................................................................................................................................................CACCCAGCGTGGCTGCCTGTAC.....................	22	1	5.00	5	0	4	1	0	0	0	0	0	0	0	0
.......ATTGGTACCTTCAACACCTGCAGTC................................................................................................................................................................................................................................................................	25	1	4.00	4	0	2	0	0	0	0	2	0	0	0	0
...............................................................................................................................................................................................................................................................GGCTGCCTGTACGATCTTGGCCA..........	23	1	4.00	4	0	4	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................GGCTGCCTGTACGATCTTGGCCAGACC......	27	1	4.00	4	0	2	2	0	0	0	0	0	0	0	0
................................................ATGCTACACCAGATTGGAGAATG-------..................................................................................................................................................................................................................	23	1	3.00	3	0	2	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................TGCCTGTACGATCTTGGCC...........	19	1	3.00	3	0	2	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................ACCCAGCGTGGCTGCCTGTAC.....................	21	1	3.00	3	0	1	2	0	0	0	0	0	0	0	0
...........GTACCTTCAACACCTGCAGTC................................................................................................................................................................................................................................................................	21	1	3.00	3	0	2	0	1	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................GCGTGGCTGCCTGTACGATCTT...............	22	1	3.00	3	0	3	0	0	0	0	0	0	0	0	0
.............................GTCAGTTGCCCCACACAGG................................................................................................................................................................................................................................................	19	1	3.00	3	0	3	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................GTTCCACCCAGCGTGGCTGCCTGTAC.....................	26	1	3.00	3	0	1	2	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................GATGGTTCCACCCAGCGTGGCTGC...........................	24	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0
.............................GTCAGTTGCCCCACACAGGATG.............................................................................................................................................................................................................................................	22	1	2.00	2	0	1	0	1	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................CACCCAGCGTGGCTGCCTGTACGATCTT...............	28	1	2.00	2	0	1	1	0	0	0	0	0	0	0	0
...........GTACCTTCAACACCTGCAGTCA...............................................................................................................................................................................................................................................................	22	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0
.....................CACCTGCAGTCAGTTGCCCC.......................................................................................................................................................................................................................................................	20	1	2.00	2	0	1	1	0	0	0	0	0	0	0	0
............................AGTCAGTTGCCCCACACAGGATGC............................................................................................................................................................................................................................................	24	1	2.00	2	0	1	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................GCCTGTACGATCTTGGCCAGACC......	23	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0
.............................GTCAGTTGCCCCACACAGGATGC............................................................................................................................................................................................................................................	23	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................TCCACCCAGCGTGGCTGCCTGTACGAT..................	27	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................GGCTGCCTGTACGATCTTGGCC...........	22	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................GGCTGCCTGTACGATCTTGGCCAGA........	25	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................GTACGATCTTGGCCAGAC.......	18	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0
..............................................GGATGCTACACCAGATTGGA..............................................................................................................................................................................................................................	20	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0
.................................GTTGCCCCACACAGGATGCT...........................................................................................................................................................................................................................................	20	1	2.00	2	0	1	0	0	0	0	1	0	0	0	0
................................AGTTGCCCCACACAGGATGCT...........................................................................................................................................................................................................................................	21	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................CACCCAGCGTGGCTGCCTGTACGAT..................	25	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0
......................ACCTGCAGTCAGTTGCCCCACACAG.................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................GTGGCTGCCTGTACGATCTTGGC............	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
CCTGGCTATTGGTACCTTCAACAC........................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..................................................................................GTACACC---A----AGAAGT--------------------T--TC--TTAG------------------T.......................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
......................................................................................................................................................................................................................................................................TGTACGATCTTGGCCAGACC......	20	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................GATGGTTCCACCCAGCGTGGCTGCCT.........................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
....................ACACCTGCAGTCAGTTGCCC........................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
................................................ATGCTACACCAGATTGGAGA............................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................TGCCTGTACGATCTTGGCCAGACC......	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................GTGGCTGCCTGTACGATCT................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.............................................AGGATGCTACACCAGATTGGAGA............................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...GGCTATTGGTACCTTCAACACCTGCA...................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................TGTACGATCTTGGCCAGACCGAT...	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................TGTACGATCTTGGCCAGAC.......	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
............................AGTCAGTTGCCCCACACAGG................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0
.......ATTGGTACCTTCAACACCTGCAGC.................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................ATGGTTCCACCCAGCGTGGCTGCC..........................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................CCACCCAGCGTGGCTGCCC.........................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................TGGTTCCACCCAGCGTGGCTGC...........................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................TGCCTGTACGATCTTGGCCAGACCG.....	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................TGGTTCCACCCAGCGTGGCTGCC..........................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................GCTGCCTGTACGATCTTGGCCAGACC......	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...............CTTCAACACCTGCAGTCAGTTG...........................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.............................GTCAGTTGCCCCACACAGGATGCTA..........................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................ATGGTTCCACCCAGCGTGGCTGC...........................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
................TTCAACACCTGCAGTCAGT.............................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..............................................GGATGCTACACCAGATTGGAGA............................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................GGCTGCCTGTACGATCTTGG.............	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.................................................TGCTACACCAGATTGGAGA............................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...............................................GATGCTACACCAGATTGGAGAATG-------..................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
............TACCTTCAACACCTGCAGTCAGTT............................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................TGCCTGTACGATCTTGGCCAGACCGA....	26	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..................CAACACCTGCAGTCAGTTGCCCCACAC...................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
..................................................GCTACACCAGATTGGAGAAT..........................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
................................AGTTGCCCCACACAGGATGCTACACCAG....................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
............................AGTCAGTTGCCCCACACAG.................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................CACCCAGCGTGGCTGCCTGTA......................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.............................................AGGATGCTACACCAGATTGGA..............................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
............TACCTTCAACACCTGCAGTCA...............................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...............................CAGTTGCCCCACACAGGATGCT...........................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...........................................ACAGGATGCTACACCAGATTGGAGAAT..........................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................TTCCACCCAGCGTGGCTGCCTG........................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.......................................CCACACAGGATGCTACACCAGAT..................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................GCGTGGCTGCCTGTACGAT..................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................GTGGCTGCCTGTACGATCTTGGCCA..........	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................CTGTACGATCTTGGCCAGACCGA....	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.......................................CCACACAGGATGCTACACCAGA...................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................GTTCCACCCAGCGTGGCTGCC..........................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
...........GTACCTTCAACACCTGCAGTCAGTTGCCC........................................................................................................................................................................................................................................................	29	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.........................................ACACAGGATGCTACACCAGATTG................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.......................................CCACACAGGATGCTACACCA.....................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................GTACGATCTTGGCCAGACC......	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.........................TGCAGTCAGTTGCCCCACACAGGAT..............................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..............................................GGATGCTACACCAGATTGG...............................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
................................AGTTGCCCCACACAGGATGC............................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..............................................GGATGCTACACCAGATTGGAG.............................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................GGCTGCCTGTACGATCTT...............	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................GATGGTTCCACCCAGCGTGGCTGCC..........................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
......................ACCTGCAGTCAGTTGCCCC.......................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
...................................TGCCCCACACAGGATGCTACACCAGAT..................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................GTTCCACCCAGCGTGGCTGCCTGTACG....................	27	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
................................AGTTGCCCCACACAGGAT..............................................................................................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................TCCACCCAGCGTGGCTGCCTGTACGATC.................	28	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................CACCCAGCGTGGCTGCCTGT.......................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.......ATTGGTACCTTCAACACCTGCAGTCAGT.............................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0
....................................GCCCCACACAGGATGCTACACCAGAT..................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...............................................GATGCTACACCAGATTGGAGAAT..........................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.......................................................................................................................................................................................................................................................................GTACGATCTTGGCCAGACCGATT..	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.............................................................................................................................................................................................................................................GATGGTTCCACCCAGCGT.................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..................................................GCTACACCAGATTGGAGA............................................................................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................CAGCGTGGCTGCCTGTAC.....................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0

droEre2

CCAGGCTATTGGAACCTTCAAGACCTGCAGTCAGTTGCCCCACACAGAATGCTTCACCAGATTGGAGAGCG-------GTACGTCCAGA---G----TGAAG---------------------T--TT--TTAG------------------TCAA----------A----TAAA-----------------------TCCTTAGCC--TCTA-------TATCAT-TTTGCTTCTAGATGGCTCCACCCAACGCGGCTGCCTGTACGATCTCGGCCAGACTGAATTT	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
.......................................................................................................................................................................................................................................................................GTACGATCTCGGCCAGACT......	19	1	6.00	6	1	0	0	1	4	0	0
..................................................GCTTCACCAGATTGGAGAG...........................................................................................................................................................................................................................	19	1	4.00	4	0	0	0	0	4	0	0
...........................................ACAGAATGCTTCACCAGATTGGAGAG...........................................................................................................................................................................................................................	26	1	3.00	3	0	0	0	1	1	1	0
................................................ATGCTTCACCAGATTGGAGA............................................................................................................................................................................................................................	20	1	3.00	3	0	0	0	1	2	0	0
.......ATTGGAACCTTCAAGACCTGCAGTCA...............................................................................................................................................................................................................................................................	26	1	3.00	3	0	1	0	0	1	1	0
..........................................CACAGAATGCTTCACCAGATTGGAGAG...........................................................................................................................................................................................................................	27	1	2.00	2	0	0	0	0	1	1	0
.......................................................................................................................................................................................................................................................................GTACGATCTCGGCCAGACTGA....	21	1	2.00	2	1	0	0	0	1	0	0
...........GAACCTTCAAGACCTGCAGTC................................................................................................................................................................................................................................................................	21	1	2.00	2	1	0	0	0	1	0	0
...GGCTATTGGAACCTTCAA...........................................................................................................................................................................................................................................................................	18	1	2.00	2	2	0	0	0	0	0	0
..................................................GCTTCACCAGATTGGAGA............................................................................................................................................................................................................................	18	1	2.00	2	1	0	0	0	0	1	0
......................................................................................................................................................................................................................................................................TGTACGATCTCGGCCAGACTGA....	22	1	2.00	2	0	0	0	0	2	0	0
.............................................................................................................................................................................................................................................GATGGCTCCACCCAACGCGGC..............................	21	1	1.00	1	0	0	0	1	0	0	0
.......................................................................................................................................................................................................................................................................GTACGATCTCGGCCAGACTG.....	20	1	1.00	1	0	0	0	0	0	1	0
...............................................................................................................................................................................................................................................TGGCTCCACCCAACGCGGCT.............................	20	1	1.00	1	0	0	0	1	0	0	0
...............................................................................................................................................................................................................................................................GGCTGCCTGTACGATCTC...............	18	1	1.00	1	0	1	0	0	0	0	0
.....................GACCTGCAGTCAGTTGCCCCACACA..................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0	0
....................AGACCTGCAGTCAGTTGCCCC.......................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0
.............................................AGAATGCTTCACCAGATTGGAGA............................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	1	0	0
.....................................................................................................................................................................................................................................................CACCCAACGCGGCTGCCTGTACG....................	23	1	1.00	1	1	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................TGCCTGTACGATCTCGGC............	18	1	1.00	1	0	0	0	0	0	1	0
......TATTGGAACCTTCAAGACCTGCAGTC................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................CTGCCTGTACGATCTCGGCCA..........	21	1	1.00	1	0	0	0	0	0	1	0
......................................................................................................................................................................................................................................................................TGTACGATCTCGGCCAGACTG.....	21	1	1.00	1	0	0	0	0	0	1	0
.................................................................................................................................................................................................................................................GCTCCACCCAACGCGGCT.............................	18	1	1.00	1	1	0	0	0	0	0	0
...GGCTATTGGAACCTTCAAGACCTGCAGTC................................................................................................................................................................................................................................................................	29	1	1.00	1	0	1	0	0	0	0	0
.........................................ACACAGAATGCTTCACCAGATTGGAGA............................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	1	0	0	0
............AACCTTCAAGACCTGCAGTCAGTTG...........................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	1	0
.....................................................................................................................................................................................................................................................CACCCAACGCGGCTGCCTGT.......................	20	1	1.00	1	0	0	1	0	0	0	0
................TTCAAGACCTGCAGTCAGTTGCCCCAC.....................................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0
...................................................CTTCACCAGATTGGAGAG...........................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	1	0	0
....................................................TTCACCAGATTGGAGAGC..........................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	1	0
................................AGTTGCCCCACACAGAATGCT...........................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................GATCTCGGCCAGACTGAAT..	19	1	1.00	1	0	1	0	0	0	0	0
.................................................................................................................................................................................................................................................................CTGCCTGTACGATCTCGGCC...........	20	1	1.00	1	0	1	0	0	0	0	0
................................AGTTGCCCCACACAGAATGCTT..........................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	1	0	0
................................................ATGCTTCACCAGATTGGAGAG...........................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0	0
.....................GACCTGCAGTCAGTTGCCCCA......................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0
...............................................AATGCTTCACCAGATTGGAG.............................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0	0	0
.........................................ACACAGAATGCTTCACCAGATTGGAG.............................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	1	0
.........................................................................................................................................................................................................................................................CAACGCGGCTGCCTGTACGATCTC...............	24	1	1.00	1	1	0	0	0	0	0	0
..................................................GCTTCACCAGATTGGAGAGC..........................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	1	0	0
...............................................................................................................................................................................................................................................................GGCTGCCTGTACGATCTCGGCC...........	22	1	1.00	1	1	0	0	0	0	0	0

dvi_5929

scaffold_12875:10268087-10268161 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads