| droVir3 |
scaffold_12875:9896577-9896827 + |
dvi_5890 |
TTAAGC-T-----TTA---------TCATGC----------------------------------GCTGTTGCCAA------------------------------------------------------------------------------AATTCATAATTGTTTTCGTTTTATTTTGTTGTGTTCAAATTTGA------TGGCCA-----CCAGTGTAA---AACTTTGTGTTTATTATG------------------------------------------------------------------------------------------------------------------ATTC-GCATTT--TTACTCATTATCTTTTGCTTAA-----------------------------------------------CCAT----TCTC-------------------TTA------------TAATACG------------------------------------AA------CC-------------AATCTGATCAC----ATGTG-TGTATTGTTTTTTTGTC--ATCCCTGCAGTCTGCTAAAAATGGACGCCATTAGTCGCAACACAGCTTCGGTCGCTCAGG |
| droMoj3 |
scaffold_6496:17137371-17137659 - |
|
ATGAAA-T-----AAA---------TCTTGT----------------------------------GTTGTTGGG--------------TGTTGACGTGCTTTTATTAAATTTTTTGCATTCTTTGTTTTT-----------------------------------------------------------CAATTTTCT------TGCATATTTATCAAGTTTAATTCCACTTTATGTTTA-TATGATT-ACCAAAATTCTTCAAA-----------------------------------------------------------------------------------------------------------------------TTTTGATTAAG-----------TT--------------TTATCTTTCGA-GTTTTCATAAT----TTTT-------------------CTA------------TAAT---------------------TTAC----------------------CCAATGTAATTGCTTCATCTAATCTCT-C-CTTTCGT----TTGCTC---TCT--TCTTCCGCAGTCTGCTAAAAATGGACGCAATTAGTCGCAATACAGCTTCGGTCGCTCAGG |
| droGri2 |
scaffold_15245:3097422-3097643 + |
|
TTTAG-TTTTC---------------CTTGC----------------------------------GCTATTGCCAA--------------------------------------------------------------------------------------------------------------TTTT-------------------------------------------------------------------------------AT------------------------------TTG-----------------------------------AAT----GCTTTTGCTG-----TT-GTCCCTTTTCATTTATT-TCATTTATTTAT-----------------------------------------------TTAT----TA--------------------TATA------------TTATATGTATATATTTTCTCCTTATATATTCCATGTATATATACAT------C-------------TTACTAATCTC----TTGTT-------GATTTT---TTTCCAACTTACAGTCTGCTAAAAATGGACGCCATTAGTCGCAATACAGCTTCGGTCGCTCAGG |
| droWil2 |
scf2_1100000004512:2445466-2445645 + |
|
TTTAGC-TTCGTCAAAAAAAATTTTTTTTCT----------------------------------GCTGTTGGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTTTGTTTAATTTAGTTTATTTTGA--TATA----------------------TTTTTATGTTTT--TGTTATACTGACTAGCTATTGATTT-A----T--AAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT----TTAT------CT--TTTTTTACAGTCTACTAAAAATGGATGCAATTAGTCGTAATACTGCTTCGGTCGCTCAGG |
| dp5 |
3:8895888-8896037 + |
|
TTCAC-------------------------------------------------------------------------------T----------------TGTTTACTTG-TTTGTG-TC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTT-------------------------------------------------------ACTGTTCCTTATCGTTCTTT------ATCGGAA---TCAAT----------------------------------------------------------------------TTCTAATCGATGTTTTTCGAT----TTGTCT---CGT--TTTATTGCAGTCTGCTGAAAATGGACGCCATTAGTCGCAACACCGCTTCGGTCGCTCAGG |
| droPer2 |
scaffold_4:2781281-2781430 + |
|
TTCAC-------------------------------------------------------------------------------T----------------TGTTTACTTG-TTTGTG-TC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTT-------------------------------------------------------ACTGTGCTTTATCGTTCTTT------ATCGGAA---TCAAT----------------------------------------------------------------------TTTTAATCGATGTTTTTCGAT----TTGTCT---CGT--TTTATTGCAGTCTGCTGAAAATGGACGCCATTAGTCGCAACACCGCTTCGGTCGCTCAGG |
| droAna3 |
scaffold_13266:2319049-2319116 - |
|
TCCTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------TT--ATCCTTACAGTCTGCTGAAAATGGACGCCATCAGTCGCAACACCGCTTCGGTCGCTCAGG |
| droBip1 |
scf7180000396759:1364165-1364233 - |
|
TCCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG------TC--TTACTTACAGTCTGCTGAAAATGGACGCCATCAGTCGCAACACCGCTTCGGTCGCTCAGG |
| droKik1 |
scf7180000302367:105644-105926 - |
|
TTAAC-TTTAC---------------AACG--------------------------------------ATTGCCAGTTAGTCGTTAGTCGTTACTTCGTTTTGGTTAACTT-TTCGTG-TCTCTGTTTTTCCAAAATTAAATTATTTTCAATATAAATAAC-----------------------------------------------------------------------CATTTCTTTTATAATTTCGC-----------------ACCGTT---------------------GA---C-----------------------------------------------------------------C------------------------ACGTTTTTATTACATTTTTACCTCTAATTTTTACCTTTTGTTATTCTTAT--------------------------AAAC---------------TATTAT-------------------T-------------------AATGCCGT-------------ATACTAATCGT----TACCC---------A------TT--CTCTTTCCAGTCTGCTCAAAATGGACGCCATCAGTCGCAACACCGCTTCGGTCGCTCAGG |
| droFic1 |
scf7180000453342:893246-893461 - |
|
TAAAGC-GTTTTCTGA---------ATATGC----------------------------------AC-----------------T----------------TGTTGA-------------------------------------------------------------------------------TTGC-------------------------------------------------------------------------------ACCGTT---------------------GT---TTTTATTGGT-TTTATTCAGTTGTTCCCCTGATTTTCCCTA----TTAATTGCTGTTTATTC-GCCTTT--TGTTTT----------------------------------------------------------------TTC----CGTT----------------GTCATA------------TC-----------------------------------TCTAAACAC------T-------------TAACTAATTCC----TC----G----CTCT------TT--ATCCTTGCAGTCTGCTGAAAATGGACGCCATTAGTCGCAACACCGCTTCGGTCGCTCAGG |
| droEle1 |
scf7180000491214:3868154-3868350 + |
|
AAAAGT-T-----TTA---------TTTTGC----------------------------------ACTGTTTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATT---------------------GT---TTAAATT-GTTTATATTCAG---TTCCCCTGATTTTCACCC----TTAATAGCTGTTTATTT-G-----------------TCCTTCATTCAA-----------------------------------------------GCAT----CAAT----------------ATCAT-------------------------------------------------------------------------------ATTCTAATCCC----TTGCCAT----TTACT-----TT--ATCCTTGCAGTCTGCTGAAAATGGACGCCATTAGTCGCAACACCGCTTCGGTCGCTCAGG |
| droRho1 |
scf7180000776849:821388-821609 - |
|
TTTATA-T----------------------------------ATTTCCTTTCTACCGAAATTTGTACATATGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAATC---------------------TT---TTAAATTGGTTTTTATTCAGTTGTTTCCATGATTTTTAACT----TCAGTTGCTGTTTATTTTA----T--CAATTTGTTGTCCTTAA-------------------------------------------------------------------------------AAAA-----------------------------------------------------------ACATATCAT-------------ATTCTAACCTC----TTCCTAT----TTGCT-----TT--ATCTTTACAGTCTGCTGAAAATGGACGCCATTAGTCGCAACACCGCTTCGGTCGCTCAGG |
| droBia1 |
scf7180000302143:1493154-1493438 + |
|
TTGCG-TTTCT---------------AATGAGTTATTTTTATATTCCCCATCC------------AC-----------------T----------------TGTTCT-------------------------------------------------------------------------------TTTCAAATTTGTAAATATTGG-------------------------------------------CCGAAATACTTAAAATCGTTCAATA---------------------AT---TTATATTGGT-------------TTCTCCTGAGTTTCAACT----TCAATT-CTGTTTATTT-GCCACT--CCATTTGTTGTCCTTTGTTTAA-----------------------------------------------TCAC----CATT--------TTATTTACATAATAATT----TTATT------------------------------------------------TTAAC-------------AATCTAACCCG----TTTCCAT----TTGC------TT--ATCCTTGCAGTCTGCTGAAAATGGACGCCATTAGTCGCAACACCGCTTCGGTCGCTCAGG |
| droTak1 |
scf7180000415389:175405-175628 - |
|
TTCT----------CA---------TTTTGC----------------------------------ACTGTTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC--------------------------AATATTTATTGGTTTTTACTCAATTGTTCCCCTG-TTTTCACCT----TCAATTGCTGTTTATTT-GCCACT--TGATTTCTTGTCCTTTGTTTAA-----------------------------------------------TCAC----CAAT--------CA------ATCACAA---TCAATTCT------------------------------------------------TTAAT-------------AATCTAACCCC----TTTCCAT----TTGC------TT--ATCCTTGCAGTCTGCTGAAAATGGACGCCATTAGTCGCAACACCGCTTCGGTCGCTCAGG |
| droEug1 |
scf7180000409462:124488-124719 - |
|
TTTTAT-C-----TGA---------TTTTGC----------------------------------ACTATTTAA-------------------------------------------------------------------TCATTGTAACCATAATTCAA-----------------------------------------------------------------------------------------------------------------------------------------------TATTGGTTTTTACTCAGTT-TTCCCCTGATTTTCACCT----ACACTCGCTGTTCTGTT-GTCACT--TAATTTGTTGTCCTTTGTTTAT-----------------------------------------------TTAT----TAAC----------------TTAATA------------TATTTC----------------------------------------------C-------------AATCTAACTGA----TTTCTTT----TTCC------TT--ATCCTTACAGTCTACTAAAAATGGACGCCATTAGTCGCAACACCGCTTCGGTCGCTCAGG |
| dm3 |
chr2R:11029263-11029391 + |
|
TTTTG-T-------------------------------------------------------------------------------------------------TAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTCGTTTAA-----------------------------------------------TTAC----CAAT----------------ATCATA------------TCATACG------------------------------------CA------AT-------------AAACTAAGACA----TTTTTAT----TCAC------TT--ATCCTTGCAGTCTGCTGAAAATGGACGCCATTAGTCGCAACACCGCTTCGGTCGCTCAGG |
| droSim2 |
2r:11700264-11700387 + |
|
TTTTG-T-------------------------------------------------------------------------------------------------TTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTCGTTTAT-----------------------------------------------ATAC----CAAT----------------ATCATAAAAAT-----------------------------------------------------------A-------------ATTCTAATTAT----TGTTTAT----TCAC------TT--ATCCTTGCAGTCTGCTAAAAATGGACGCCATTAGTCGCAACACCGCTTCGGTCGCTCAGG |
| droSec2 |
scaffold_1:8523640-8523764 + |
|
TTTTG-T-------------------------------------------------------------------------------------------------TTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTCGTTTAT-----------------------------------------------ATAC----CAAT----------------ATCATAATAAT-----------------------------------------------------------C-------------AATCTAATATAT---TGTTTAT----TCAC------TT--ATCCTTGCAGTCTGCTAAAAATGGACGCCATTAGTCGCAACACCGCTTCGGTCGCTCAGG |
| droYak3 |
2R:10949815-10949945 + |
|
TTTTG-T-------------------------------------------------------------------------------------------------TCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTCGTTTAA-----------------------------------------------TTAC----CAAT----------------ACCACAATA----CCCAT------------------------------------------------TTATT-------------AATCTAACACA----TTTCTAT----TTGC------TT--ATCCTTGCAGTCTGCTGAAAATGGACGCCATCAGTCGCAACACCGCTTCGGTCGCTCAGG |
| droEre2 |
scaffold_4845:14844764-14844825 - |
|
T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--ATCCTTGCAGTCTGCTGAAAATGGACGCCATTAGTCGCAACACCGCTTCGGTCGCTCAGG |