ID:

dvi_5781

 Coordinate:

scaffold_12875:8742378-8742438 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [dvir_GLEANR_7025:2]; exon [dvir_GLEANR_7025:1]; CDS [Dvir\GJ21687-cds]; CDS [Dvir\GJ21687-cds]; intron [Dvir\GJ21687-in]

No Repeatable elements found

Sense Strand Reads

##################################################-------------------------------------------------------------##################################################
CGCTCTGATGATGATCGGGCTAGTTGCACTCGCCGTCTGCTTGGCCAGCGGTAAACACTCAAGTATTTCTCCCAAGACCTGCGACTTATTCCACAATTTAATAACTTACAGCACAATCAGCCGCGACGGATAAGCCCAAAACGGATGTGGATCGTAGCAAC
**************************************************............(((..(((....)))..))).............................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 M028
head
 SRR060667
160_females_carcasses_total
 SRR060666
160_males_carcasses_total
 SRR060679
140x9_testes_total
 SRR060660
Argentina_ovaries_total
 SRR060681
Argx9_testes_total
 SRR060665
9_females_carcasses_total
 V053
head
 M027
male body		 SRR060664
9_males_carcasses_total
 SRR060671
9x160_males_carcasses_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060659
Argentina_testes_total
 V116
male body		 M061
embryo
 SRR060657
140_testes_total
 SRR060663
160_0-2h_embryos_total
 SRR060672
9x160_females_carcasses_total
 SRR060678
9x140_testes_total
 SRR060684
140x9_0-2h_embryos_total
 SRR1106729
mixed whole adult body
 SRR060670
9_testes_total
.GCTCTGATGATGATCGGG.............................................................................................................................................. 18 0 1 3.00 3 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..............................................................................................................GCACAATCAGCCGCGACGGAT.............................. 21 0 1 3.00 3 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................AGCGCACAATCAGCCGCGACGGATA............................. 25 2 1 3.00 3 0 0 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................CTCGCCGTCTGCTTGGCCAG................................................................................................................. 20 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................CGACGGATAAGCCCAAAACGGATGT............. 25 0 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................CCCCAAAACGGATGTGGATC........ 20 1 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................AACGGATGTGGATCGTAGCA.. 20 0 1 2.00 2 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................GACGGATAAGCCCAAAACGGATGT............. 24 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........GATGATCGGGCTAGTTGCA..................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................CGCGACGGATAAGCCCAAAACGGAT............... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.GCTCTGATGATGATCGGGCTAGT......................................................................................................................................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................ATCAGCCGCGACGGATAAGCCCA....................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................TCAGCCGCGACGGATAAGCCCAAAA.................... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................GCCGCGACGGATAAGCCCA....................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................AACGGATGTGGATCGTAGC... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
........TGATGATCGGGCTAGTTGCACT................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.GCTCTGATGATGATCGGGCTA........................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.............ATCGGGCTAGTTGCACTCGCC............................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................ATCAGCCGCGACGGATAA............................ 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................ACAATCAGCCGCGACGGATAAGCCCAA...................... 27 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................AAGCCCAAAACGGATGTGGATC........ 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................AGTTGCACTCGCCGTCTGCTTGGCC................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......ATGATGATCGGGCTAGTTGC...................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....TGATGATGATCGGGCTAGT......................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................CCAAAACGGATGTGGATCGTAGC... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................ACAATCAGCCGCGAC.................................. 15 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
..........ATGATCGGGCTAGTTGCACT................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....TGATGATGATCGGGCTAGTTGCAC.................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............CGGGCTAGTTGCACTCGC................................................................................................................................ 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................ACAGCACAATCAGCCGCGACGGA............................... 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.GCTCTGATGATGATCGGGC............................................................................................................................................. 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................AGTTGCACTCGCCGTCTGCT........................................................................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...................CTAGTTGCACTCGCCGTCTGC......................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..........................................................................................................................................AAACGGATGTGGATCGTAGC... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................GGATAAGCCCAAAACGGATGTG............ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................AGCCGCGACGGATAAGCCCAAAA.................... 23 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......GATGATGATCGGGCTAGTTGCACTCGC................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................AAAACGGATGTGGATCGTAGC... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................CACTCGCCGTCTGCTTGGCCAGC................................................................................................................ 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................AATCAGCCGCGACGGATAAGCCC........................ 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........TGATGATCGGGCTAGTTGCAC.................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................AGCCGCGACGGATAAGCCCAA...................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................CCGCGACGGATAAGCCCAAAACG.................. 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................CTCGCCGTCTGCTTGGCCA.................................................................................................................. 19 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................GCGACGGATAAGCCCAAA..................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................AAAACGGATGTGGATCGTAGCAAC 24 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................GACGGATAAGCCCAAAACGGAT............... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................TGCACTCGCCGTCTGCTTGGCC................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.....................AGCTGCACTCGCCGTCTGCTTGG..................................................................................................................... 23 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................GCCGCGACGGATAAGCCCAAA..................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................CGCCGTCTGCTTGGCCAGCGCACA........................................................................................................... 24 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................TGCACTCGCCGTCTGCTTGGCCAGCGC.............................................................................................................. 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................AGCGCACAATCAGCCGCGACGG................................ 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................ACAATCAGCCGCGACGGATAAGC.......................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................TGCACTCGCCGTCTGCTTGGC.................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......GGTGATGATCGGGCTAGTTGCC..................................................................................................................................... 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................TAAGCCAAGAAAGGATGTGGATC........ 23 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.....................................TGATTGGCTAGCGGTAAA.......................................................................................................... 18 2 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................CGTCTGCTTGGCCAGCGCACA........................................................................................................... 21 3 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.GCTGGGATGAGGATCGGGC............................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

GCGAGACTACTACTAGCCCGATCAACGTGAGCGGCAGACGAACCGGTCGCCATTTGTGAGTTCATAAAGAGGGTTCTGGACGCTGAATAAGGTGTTAAATTATTGAATGTCGTGTTAGTCGGCGCTGCCTATTCGGGTTTTGCCTACACCTAGCATCGTTG
**************************************************............(((..(((....)))..))).............................************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060685
9xArg_0-2h_embryos_total
 M047
female body
 SRR1106729
mixed whole adult body
 GSM1528803
follicle cells		 V047
embryo
........................................................TGAGTTCATAAAGAGGGTTCTGGACG............................................................................... 26 0 1 1.00 1 1 0 0 0 0
....................................GACGGACCGGTTGCCATTTGT........................................................................................................ 21 2 2 0.50 1 0 1 0 0 0
........................................................................................................................GGCGCTGCCTATCCC.......................... 15 2 20 0.10 2 0 0 2 0 0
........................................................................................ATGGTGTTAAATTATT......................................................... 16 1 13 0.08 1 0 0 0 1 0
.............................................................................................................................................GCCCTCACCTAGCATCAT.. 18 3 18 0.06 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12875:8742328-8742488 + dvi_5781 CG-CTCTGATGATGATCGGGCTAGTTGCACTCGCCGTCTGCTTGGCCAGCGGTAAACACTCAA--GTATTTCT-----C------------------------CCAAGACCTGCGACTTAT---------------------------------TCC-----------ACAATTTAATAAC-TTAC----------------AGCACAATCAGCCGCGACGGATAAGCCCAAAACGGATGTGGATCGTAGCAAC
droMoj3 scaffold_6496:18458581-18458724 - CC-TTCTCATGATGATCGGCCTAGCGGCACTCGCTGTTTGCTTGGCCAGCGGTAAATAGTTTTAAAGGGCTCATTTATT------------------------CTTAGACCAGCGACTGAT---------------------------------------------------------------------CGTCCTCTTTGCAGCAC-------TGCCACCCAAAAG--------CTTTGTGGATCGTAGCAA-
droGri2 scaffold_15245:2132153-2132297 + CA-CTCCGATGTTTTTCGCACTAGTTGCACTAGCCTTCTGCTTGGCTAGCGGTAAATATTTGAGTATATGTT-------------------------------CGCAGA---------------------------------------------------ATGGAACTATAATTTGATGATATTGC----------------AGCACAA---------ACTGATAAACCCGCCACGTATGTCGATCACAGCAA-
droWil2 scf2_1100000004510:3863225-3863251 - CA-CTCTGATAATATTAGGGCTGATTGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396427:1330317-1330375 - AA-CCTGGATCTTACTGGGCCTGATGGCCGGCGCCGCCACCTTGTCTGGGGGTAAATATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000454039:1721936-1722086 + CA-CTGGAACTTGGATTTCACTGGTGGTGGCCATCGCCACTCTGACTAGCGGTAAACACATAA--ATTATCTT-----G------------------------CT-----------------TTCCTGCTTAA--CATTTAAGCTGCAACTAAATCCAA--------------------------A----------------AACATAATTTTATTCAGCAGACAA----------TTTGTGAACTGTTTTAAC
droBia1 scf7180000302291:2880518-2880687 - CAACTTGGATTCTACTGGGCCTGATGGCCGGCATCGCCTCTATGTCTAGCGGTATGTCTTTCTTAAAAATGTCT----TAAAAACCCCAATCTGGTATAATTTA---GA--------------------------------------------------------------------TGAC-AAAAAACACGAACTCAAGTTAGAAC-------TGCAAAATACAAGTCAGAACCGAACACAGATTTAAGTGG-
droTak1 scf7180000415401:29754-29826 + CAACTTGGATTCTACTGGGCCTGATGGCCGGCATCGCCTCTCAGTCTAGCGGTAAATATATCTAAATATTTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 2r:16992701-16992772 + AG-CTTGGATTCTACTGGGCCTGCTGGCCGGCATCGCCTCTCTGTCTAGCGGTGATTATATTGAGATACTTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_1:13977501-13977557 + AG-CTTGGATTCTACTGGGCCTGCTGGCCGGCATCGCCTCTCTGTCTAGCGGTGAATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4845:10567029-10567178 + AG-CTTGGATTCTACTGGGCGTGCTGGCCGGCATCGCCTCTCTGGCTAGCGGTAAGTATATATACATAGATACTTTTTT------------------------ATTG----AGATACTTTTTTTTCAGTTGAGATC-----AGTTGAGATTCAACTCAAAATGGCGTAAAGATATTAA----------------------------------------------------------------------AATACT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
CG-CTCTGATGATGATCGGGCTAGTTGCACTCGCCGTCTGCTTGGCCAGCGGTAAACACTCAA--GTATTTCT-----C------------------------CCAAGACCTGCGACTTAT---------------------------------TCC-----------ACAATTTAATAAC-TTAC----------------AGCACAATCAGCCGCGACGGATAAGCCCAAAACGGATGTGGATCGTAGCAACSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.G-CTCTGATGATGATCGGG..........................................................................................................................................................................................................................................1813.003000000000010010000000000000001000000000000000000000000000000000
...........................................................................................................................................................................................................GCACAATCAGCCGCGACGGAT..............................2113.003021000000000000000000000000000000000000000000000000000000000000
.............................CTCGCCGTCTGCTTGGCCAG.............................................................................................................................................................................................................2012.002020000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................CGACGGATAAGCCCAAAACGGATGT.............2512.002000000000020000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................AACGGATGTGGATCGTAGCA..2012.002001000000000000000000000000000000000000000000000000000000000100
.........................................................................................................................................................................................................................GACGGATAAGCCCAAAACGGATGT.............2411.001000000000000000000000000000000010000000000000000000000000000000
..........GATGATCGGGCTAGTTGCA.................................................................................................................................................................................................................................1911.001000000000000000000000000000000010000000000000000000000000000000
......................................................................................................................................................................................................................CGCGACGGATAAGCCCAAAACGGAT...............2511.001001000000000000000000000000000000000000000000000000000000000000
.G-CTCTGATGATGATCGGGCTAGT.....................................................................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
................................................................................................................................................................................................................ATCAGCCGCGACGGATAAGCCCA.......................2311.001000000000000000000000100000000000000000000000000000000000000000
.................................................................................................................................................................................................................TCAGCCGCGACGGATAAGCCCAAAA....................2511.001000000000000001000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................GCCGCGACGGATAAGCCCA.......................1911.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................AACGGATGTGGATCGTAGC...1911.001000000000000000000000000000000000001000000000000000000000000000
.........TGATGATCGGGCTAGTTGCACT...............................................................................................................................................................................................................................2211.001000000000000000100000000000000000000000000000000000000000000000
.G-CTCTGATGATGATCGGGCTA.......................................................................................................................................................................................................................................2111.001000000000000000000000100000000000000000000000000000000000000000
..............ATCGGGCTAGTTGCACTCGCC...........................................................................................................................................................................................................................2111.001010000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................ATCAGCCGCGACGGATAA............................1811.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................ACAATCAGCCGCGACGGATAAGCCCAA......................2711.001000000000000000100000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................AAGCCCAAAACGGATGTGGATC........2211.001100000000000000000000000000000000000000000000000000000000000000
......................AGTTGCACTCGCCGTCTGCTTGGCC...............................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
........ATGATGATCGGGCTAGTTGC..................................................................................................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
......TGATGATGATCGGGCTAGT.....................................................................................................................................................................................................................................1911.001000000000000000100000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................CCAAAACGGATGTGGATCGTAGC...2311.001000000000100000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................ACAATCAGCCGCGAC..................................1511.001000000000000000000000000000000000000000000000000000000000100000
...........ATGATCGGGCTAGTTGCACT...............................................................................................................................................................................................................................2011.001100000000000000000000000000000000000000000000000000000000000000
......TGATGATGATCGGGCTAGTTGCAC................................................................................................................................................................................................................................2411.001000000000000000000000000000001000000000000000000000000000000000
................CGGGCTAGTTGCACTCGC............................................................................................................................................................................................................................1811.001010000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................AC----------------AGCACAATCAGCCGCGACGGA...............................2311.001000000000000000010000000000000000000000000000000000000000000000
.G-CTCTGATGATGATCGGGC.........................................................................................................................................................................................................................................1911.001000000000000000010000000000000000000000000000000000000000000000
......................AGTTGCACTCGCCGTCTGCT....................................................................................................................................................................................................................2011.001000000000000000000000000000000000010000000000000000000000000000
....................CTAGTTGCACTCGCCGTCTGC.....................................................................................................................................................................................................................2111.001000000000000000000000010000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................AAACGGATGTGGATCGTAGC...2011.001010000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................GGATAAGCCCAAAACGGATGTG............2211.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................AGCCGCGACGGATAAGCCCAAAA....................2311.001000000000000000000000000000000010000000000000000000000000000000
.......GATGATGATCGGGCTAGTTGCACTCGC............................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................AAAACGGATGTGGATCGTAGC...2111.001000000000010000000000000000000000000000000000000000000000000000
...........................CACTCGCCGTCTGCTTGGCCAGC............................................................................................................................................................................................................2311.001000000000000000010000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................AATCAGCCGCGACGGATAAGCCC........................2311.001000000000000000001000000000000000000000000000000000000000000000
.........TGATGATCGGGCTAGTTGCAC................................................................................................................................................................................................................................2111.001000000010000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................AGCCGCGACGGATAAGCCCAA......................2111.001000000000000000010000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................CCGCGACGGATAAGCCCAAAACG..................2311.001010000000000000000000000000000000000000000000000000000000000000
.............................CTCGCCGTCTGCTTGGCCA..............................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000100
.......................................................................................................................................................................................................................GCGACGGATAAGCCCAAA.....................1811.001000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................AAAACGGATGTGGATCGTAGCAAC2411.001000000000000000000000000000000000000000000000000000000000000100
.........................................................................................................................................................................................................................GACGGATAAGCCCAAAACGGAT...............2211.001000000000000001000000000000000000000000000000000000000000000000
.........................TGCACTCGCCGTCTGCTTGGCC...............................................................................................................................................................................................................2211.001000000000000000000000000000010000000000000000000000000000000000
....................................................................................................................................................................................................................GCCGCGACGGATAAGCCCAAA.....................2111.001000000000000000001000000000000000000000000000000000000000000000
.........................TGCACTCGCCGTCTGCTTGGCCAGCGC..........................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................ACAATCAGCCGCGACGGATAAGC..........................2311.001001000000000000000000000000000000000000000000000000000000000000
.........................TGCACTCGCCGTCTGCTTGGC................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
CC-TTCTCATGATGATCGGCCTAGCGGCACTCGCTGTTTGCTTGGCCAGCGGTAAATAGTTTTAAAGGGCTCATTTATT------------------------CTTAGACCAGCGACTGAT---------------------------------------------------------------------CGTCCTCTTTGCAGCAC-------TGCCACCCAAAAG--------CTTTGTGGATCGTAGCAA-SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.....CTCATGATGATCGGCCTAGC.....................................................................................................................................................................................................................................2012.002000002
........................................................TAGTTTTAAAGGGCTCATTTA.................................................................................................................................................................................2111.001100000
.........................................................................................................TAGACCAGCGACTGAT---------------------------------------------------------------------CGT.............................................................1911.001100000
.........................GGCACTCGCTGTTTGCTTGGC................................................................................................................................................................................................................2111.001100000
.............................................................................TT------------------------CTTAGACCAGCGACTGAT---------------------------------------------------------------------CGTCCT..........................................................2611.001000100
.............................................................................................................................................................................................................................CAAAAG--------CTTTGTGGATCGTAG....2111.001000001
...TTCTCATGATGATCGGCCTAGC.....................................................................................................................................................................................................................................2211.001000001
.............GATCGGCCTAGCGGCACTCGC............................................................................................................................................................................................................................2111.001100000
...........ATGATCGGCCTAGCGGCACTCG.............................................................................................................................................................................................................................2211.001100000
..........GATGATCGGCCTAGCGGCACTC..............................................................................................................................................................................................................................2211.001000001
droGri2
CA-CTCCGATGTTTTTCGCACTAGTTGCACTAGCCTTCTGCTTGGCTAGCGGTAAATATTTGAGTATATGTT-------------------------------CGCAGA---------------------------------------------------ATGGAACTATAATTTGATGATATTGC----------------AGCACAA---------ACTGATAAACCCGCCACGTATGTCGATCACAGCAA-SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..............................................................................................................................................................................................................................ATAAACCCGCCACGTATGTCGATCACA.....27117.0017170
.................................................................................................................................................................................................................................AACCCGCCACGTATGTCGATC........21116.0016142
.................................................................................................................................................................................................................................AACCCGCCACGTATGTCGATCACA.....24114.0014131
................................................................................................................................................................................................................................AAACCCGCCACGTATGTCGATCACA.....25112.0012120
.............................................................................................................................................................................................................................GATAAACCCGCCACGTATGTCGATC........2519.00972
..............................................................................................................................................................................................................................ATAAACCCGCCACGTATGTCGATC........2419.00945
..................................................................................................................................................................................................................................ACCCGCCACGTATGTCGATC........2018.00880
.................................................................................................................................................................................................................................AACCCGCCACGTATGTCGATCA.......2217.00752
................................................................................................................................................................................................................................AAACCCGCCACGTATGTCGATC........2217.00761
......................AGTTGCACTAGCCTTCTGCTTGGCT...............................................................................................................................................................................................................2516.00660
.....................................................................................................................................................................................................................................CGCCACGTATGTCGATCACA.....2016.00660
...............................................................................................................................................................................................................................TAAACCCGCCACGTATGTCGATCACA.....2616.00660
...............................................................................................................................................................................................................................TAAACCCGCCACGTATGTCGATC........2316.00651
...................................................................................................................................................................................................................................CCCGCCACGTATGTCGATC........1916.00651
.................................................................................................................................................................................................................................AACCCGCCACGTATGTCG...........1815.00550
......................AGTTGCACTAGCCTTCTG......................................................................................................................................................................................................................1815.00550
.................................................................................................................................................................................................................................AACCCGCCACGTATGTCGAT.........2015.00541
..................................................................................................................................................................................................................................ACCCGCCACGTATGTCGATCACA.....2315.00550
......................................................................................................................................................................................................................................GCCACGTATGTCGATCACA.....1914.00440
................................................................................................................................................................................................................................AAACCCGCCACGTATGTCGATCA.......2314.00440
..................................................................................................................................................................................................................................ACCCGCCACGTATGTCGATCACAGCA..2614.00440
.............................................................................................................................................................................................................................GATAAACCCGCCACGTATGTC............2114.00431
.................................................................................................................................................................................................................................AACCCGCCACGTATGTCGATCAC......2314.00440
..........................GCACTAGCCTTCTGCTTGGCTAGCG...........................................................................................................................................................................................................2514.00440
.............................................................................................................................................................................................................................GATAAACCCGCCACGTATGTCGATCA.......2613.00321
..............................................................................................................................................................................................................................ATAAACCCGCCACGTATGTCG...........2113.00330
................................................................................................................................................................................................................A---------ACTGATAAACCCGCCACGTATGTCGATC........2913.00321
...............................AGCCTTCTGCTTGGCTAGCGC..........................................................................................................................................................................................................2113.00321
..........................GCACTAGCCTTCTGCTTGGCT...............................................................................................................................................................................................................2113.00330
................................GCCTTCTGCTTGGCTAGCGCA.........................................................................................................................................................................................................2123.00633
................................................................................................................................................................................................................A---------ACTGATAAACCCGCCACGTATG..............2313.00330
................................GCCTTCTGCTTGGCTAGCGC..........................................................................................................................................................................................................2013.00321
..............................................................................................................................................................................................................................ATAAACCCGCCACGTATGTCGATCA.......2513.00330
................................GCCTTCTGCTTGGCTAGCG...........................................................................................................................................................................................................1913.00330
....................................................................................................................................................................................................................................CCGCCACGTATGTCGATCACA.....2112.00220
..........................................................................................................................................................................................................................ACTGATAAACCCGCCACGTATGTCGATC........2812.00211
..............................................................................................................................................................................................................CAA---------ACTGATAAACCCGCCACGTATGTC............2712.00220
................................................................................................................................................................................................................................AAACCCGCCACGTATGTCGATCACAGC...2712.00220
.............................................................................................................................................................................................................................GATAAACCCGCCACGTATGTCGATCAC......2712.00220
..............................................................................................................................................................................................................................ATAAACCCGCCACGTATGTC............2012.00211
...............TCGCACTAGTTGCACTAGC............................................................................................................................................................................................................................1912.00220
........................................................................................................................................................................................................................................CACGTATGTCGATCACAGCA..2012.00220
.................................................................................................................................................................................................................................AACCCGCCACGTATGTCGA..........1912.00220
................................................................................................................................................................................................................................AAACCCGCCACGTATGTCGATCACAG....2612.00220
.................................................................................................................................................................................................................................AACCCGCCACGTATGTCGATCACAGCA..2712.00211
.............................................................................................................................................................................................................................GATAAACCCGCCACGTATGTCG...........2212.00220
.................................CCTTCTGCTTGGCTAGCGC..........................................................................................................................................................................................................1912.00220
...................................................................................................................................................................................................................................CCCGCCACGTATGTCGATCACA.....2212.00220
...........................CACTAGCCTTCTGCTTGGCT...............................................................................................................................................................................................................2012.00220
....................CTAGTTGCACTAGCCTTCTGC.....................................................................................................................................................................................................................2112.00220
................................................................................................................................................................................................................A---------ACTGATAAACCCGCCACGTA................2112.00220
...............................AGCCTTCTGCTTGGCTAGCG...........................................................................................................................................................................................................2012.00220
..................................................................................................................................................................................................................................ACCCGCCACGTATGTCGATCACAGC...2512.00220
..............................................................................................................................................................................................................................ATAAACCCGCCACGTATGTCGAT.........2312.00202
..........................GCACTAGCCTTCTGCTTG..................................................................................................................................................................................................................1812.00220
.................................................................................................................................................................................................................................AACCCGCCACGTATGTCGATCACAGC...2612.00220
...............................AGCCTTCTGCTTGGCTAGC............................................................................................................................................................................................................1912.00220
.......................GTTGCACTAGCCTTCTGCTTGGCT...............................................................................................................................................................................................................2412.00220
.................................................................................................................................................................................................................................AACCCGCCACGTATGTCGATCACG.....2411.00110
...................................................................................................................................................................................................................................CCCGCCACGTATGTCGATCA.......2011.00110
................................................................................................................................................................................................................................AAACCCGCCACGTATGTCGATCAC......2411.00110
....................CTAGTTGCACTAGCCTTCTGCTTGG.................................................................................................................................................................................................................2511.00110
................................................................................................................................................................................................................................AAACCCGCCACGTATGTCGATCACAGCA..2811.00110
........................TTGCACTAGCCTTCTGCTTG..................................................................................................................................................................................................................2011.00110
...........................................................................................................................................................................................................................CTGATAAACCCGCCACGTATGTCGATCA.......2811.00110
..............................................................................................................................................................................................................CAA---------ACTGATAAACCCGCCA....................1911.00110
..................CACTAGTTGCACTAGCCTTC........................................................................................................................................................................................................................2011.00110
............................................................................................................................................................................................................................TGATAAACCCGCCACGTATGTCG...........2311.00110
..........................GCACTAGCCTTCTGCTTGGC................................................................................................................................................................................................................2011.00110
..........................................................................................................................................................................................................................ACTGATAAACCCGCCACGTATG..............2211.00101
..................................................................................................................................................................................................................................ACCCGCCACGTATGTCGAT.........1911.00110
...........................................................................................................................................................................................................................CTGATAAACCCGCCACGTATG..............2111.00110
...................................................................................................................................................................................................................................CCCGCCACGTATGTCGATCACAGCA..2511.00101
........................TTGCACTAGCCTTCTGCTTGG.................................................................................................................................................................................................................2111.00110
.....................................................................................................................................................................................................................................CGCCACGTATGTCGATCACAGC...2211.00110
............................ACTAGCCTTCTGCTTGGCTAGCG...........................................................................................................................................................................................................2311.00110
...............................AGCCTTCTGCTTGGCTAGCGCAC........................................................................................................................................................................................................2311.00110
...............................................................................................................................................................................................................AA---------ACTGATAAACCCGCCACGTAT...............2311.00110
..........................................................................................................................................................................................................................ACTGATAAACCCGCCACGTATGTCG...........2511.00110
...........................................................................................................................................................................................................................CTGATAAACCCGCCACGTATGTC............2311.00110
..................CACTAGTTGCACTAGCCTTCTGCTT...................................................................................................................................................................................................................2511.00110
......................AGTTGCACTAGCCTTCTGCTTG..................................................................................................................................................................................................................2211.00110
....................................................................................................................................................................................................................................CCGCCACGTATGTCGATCG.......1911.00110
.......................GTTGCACTAGCCTTCTGCTTG..................................................................................................................................................................................................................2111.00110
...............................AGCCTTCTGCTTGGCTAGCGCA.........................................................................................................................................................................................................2211.00110
......................AGTTGCACTAGCCTTCTGC.....................................................................................................................................................................................................................1911.00110
...............................................................................................................................................................................................................................TAAACCCGCCACGTATGTC............1911.00110
.....CCGATGTTTTTCGCACTAGTTGCA.................................................................................................................................................................................................................................2411.00110
............................................................................................................................................................................................................CACAA---------ACTGATAAACCCGC......................1911.00110
...............................................................................................................................................................................................................................TAAACCCGCCACGTATGTCGATCACAG....2711.00110
.................GCACTAGTTGCACTAGCCTTC........................................................................................................................................................................................................................2111.00110
.............TTTCGCACTAGTTGCACTAGCCTTCTGC.....................................................................................................................................................................................................................2811.00110
...................................................................................................................................................................................................................................CCCGCCACGTATGTCGATCACAGC...2411.00110
................................................................................................................................................................................................................................AAACCCGCCACGTATGTCGA..........2011.00110
...............................................................................................................................................................................................................................TAAACCCGCCACGTATGTCGATCAC......2511.00110
....................CTAGTTGCACTAGCCTTCTG......................................................................................................................................................................................................................2011.00110
................................................................................................................................................................................................................A---------ACTGATAAACCCGCCACGTATGTCGA..........2711.00110
........................TTGCACTAGCCTTCTGCTTGGCTA..............................................................................................................................................................................................................2411.00110
..........................................................................................................................................................................................................................ACTGATAAACCCGCCACGTATGTC............2411.00110
........ATGTTTTTCGCACTAGTTGCA.................................................................................................................................................................................................................................2111.00110
......................AGTTGCACTAGCCTTCTGCTTGG.................................................................................................................................................................................................................2311.00110
..............................................................................................................................................................................................................CAA---------ACTGATAAACCCGCCACGTATGTCG...........2811.00110
.......................GTTGCACTAGCCTTCTGCTTGGCTA..............................................................................................................................................................................................................2511.00110
............................................................................................................................................................................................................................TGATAAACCCGCCACGTATGTC............2211.00110
................................................................................................................................................................................................................................AAACCCGCCACGTATGTCG...........1911.00110
CA-CTCCGATGTTTTTCGCA..........................................................................................................................................................................................................................................1911.00110
....................CTAGTTGCACTAGCCTTCTGCTTGGCTA..............................................................................................................................................................................................................2811.00101
......................AGTTGCACTAGCCTTCTGCTT...................................................................................................................................................................................................................2111.00110
.............................................................................................................................................................................................................ACAA---------ACTGATAAACCCGCCACGTATG..............2611.00110
............................................................................................................................................................................................................................TGATAAACCCGCCACGTATGTCGATCACA.....2911.00110
..............................TAGCCTTCTGCTTGGCTAGCGCA.........................................................................................................................................................................................................2311.00110
.........................TGCACTAGCCTTCTGCTTGGCTAGCGC..........................................................................................................................................................................................................2711.00101
......................................................................................................................................................................................................................................GCCACGTATGTCGATCAC......1811.00110
.............................................................................................................................................................................................................................GATAAACCCGCCACGTAT...............1811.00110
................................................................................................................................................................................................................................AAACCCGCCACGTATGTC............1811.00110
............................................................................................................................................................................................................................TGATAAACCCGCCACGTATG..............2011.00110
...CTCCGATGTTTTTCGCACTA.......................................................................................................................................................................................................................................2011.00110
..............................................................................................................................................................................................................................ATAAACCCGCCACGTATGTCGATCAC......2611.00110
............................ACTAGCCTTCTGCTTGGCT...............................................................................................................................................................................................................1911.00110
..........................GCACTAGCCTTCTGCTTGGCTAGCGCA.........................................................................................................................................................................................................2711.00110
.................................................................................................................................................................................................................................AACCCGCCACGTATGTCGATCACAG....2511.00110
................................................................................................................................................................................................................A---------ACTGATAAACCCGCCACGTATGTCG...........2611.00110
....................................................................................................................................................................................................................................CCGCCACGTATGTCGATC........1811.00110
.............................................................................................................................................................................................................................GATAAACCCGCCACGTATGTCGATCACA.....2811.00110
..................CACTAGTTGCACTAGCCTTCTGCTTG..................................................................................................................................................................................................................2611.00110
.......................GTTGCACTAGCCTTCTGCTTGGCTAGCG...........................................................................................................................................................................................................2811.00110
..........................................................................................................................................................................................................................................CGTATGTCGATCACAGCA..1811.00110
..............TTCGCACTAGTTGCACTAGCCTTCTG......................................................................................................................................................................................................................2611.00110
................................GCCTTCTGCTTGGCTAGCGCAC........................................................................................................................................................................................................2220.50110
..................................CTTCTGCTTGGCTAGCGCA.........................................................................................................................................................................................................1950.40220
droWil2
CA-CTCTGATAATATTAGGGCTGATTGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........AATATTAGGGCTGATTGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1818.00880000
CA-CTCTGATAATATTAGG...........................................................................................................................................................................................................................................1813.00330000
.......GATAATATTAGGGCTGAT.....................................................................................................................................................................................................................................1813.00321000
........ATAATATTAGGGCTGATTGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2012.00210001
.......GATAATATTAGGGCTGATTGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2111.00100001
.....CTGATAATATTAGGGCTGATT....................................................................................................................................................................................................................................2111.00110000
....TCTGATAATATTAGGGCT........................................................................................................................................................................................................................................1811.00110000
droBip1
AA-CCTGGATCTTACTGGGCCTGATGGCCGGCGCCGCCACCTTGTCTGGGGGTAAATATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CA-CTGGAACTTGGATTTCACTGGTGGTGGCCATCGCCACTCTGACTAGCGGTAAACACATAA--ATTATCTT-----G------------------------CT-----------------TTCCTGCTTAA--CATTTAAGCTGCAACTAAATCCAA--------------------------A----------------AACATAATTTTATTCAGCAGACAA----------TTTGTGAACTGTTTTAACSizeHit CountTotal NormTotal
No Reads
droBia1
CAACTTGGATTCTACTGGGCCTGATGGCCGGCATCGCCTCTATGTCTAGCGGTATGTCTTTCTTAAAAATGTCT----TAAAAACCCCAATCTGGTATAATTTA---GA--------------------------------------------------------------------TGAC-AAAAAACACGAACTCAAGTTAGAAC-------TGCAAAATACAAGTCAGAACCGAACACAGATTTAAGTGG-SizeHit CountTotal NormTotal
No Reads
droTak1
CAACTTGGATTCTACTGGGCCTGATGGCCGGCATCGCCTCTCAGTCTAGCGGTAAATATATCTAAATATTTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droSim2
AG-CTTGGATTCTACTGGGCCTGCTGGCCGGCATCGCCTCTCTGTCTAGCGGTGATTATATTGAGATACTTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.G-CTTGGATTCTACTGGGC..........................................................................................................................................................................................................................................1812.00211000000000000000
...CTTGGATTCTACTGGGCC.........................................................................................................................................................................................................................................1812.00220000000000000000
................................................GCGGTGATTATATTGAGA............................................................................................................................................................................................1811.00100000100000000000
....TTGGATTCTACTGGGCCT........................................................................................................................................................................................................................................1811.00110000000000000000
..........TCTACTGGGCCTGCTGGCCGG...............................................................................................................................................................................................................................2111.00100010000000000000
...........CTACTGGGCCTGCTGGCCGGCATCG..........................................................................................................................................................................................................................2511.00110000000000000000
...CTTGGATTCTACTGGGCCTG.......................................................................................................................................................................................................................................2011.00110000000000000000
.........................GGCCGGCATCGCCTCTCTGTC................................................................................................................................................................................................................2111.00100100000000000000
..........................GCCGGCATCGCCTCTCTGTCTAGCGGT.........................................................................................................................................................................................................2711.00100000000000001000
..........................GCCGGCATCGCCTCTCTG..................................................................................................................................................................................................................1811.00110000000000000000
....................CTGCTGGCCGGCATCGCCTCTCTG..................................................................................................................................................................................................................2411.00101000000000000000
...CTTGGATTCTACTGGGCCC........................................................................................................................................................................................................................................1911.00110000000000000000
..........................GCCGGCATCGCCTCTCTGT.................................................................................................................................................................................................................1911.00110000000000000000
...CTTGGATTCTACTGGGCCTGCT.....................................................................................................................................................................................................................................2211.00100100000000000000
...CTTGGATTCTACTGGGCCG........................................................................................................................................................................................................................................1911.00100100000000000000
.G-CTTGGATTCTACTGGGCCT........................................................................................................................................................................................................................................2011.00100100000000000000
droSec2
AG-CTTGGATTCTACTGGGCCTGCTGGCCGGCATCGCCTCTCTGTCTAGCGGTGAATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........CTACTGGGCCTGCTGGCCGGCA.............................................................................................................................................................................................................................2211.0011000
AG-CTTGGATTCTACTGGGCC.........................................................................................................................................................................................................................................2011.0011000
....................................CCTCTCTGTCTAGCGGTGAATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2211.0010001
droEre2
AG-CTTGGATTCTACTGGGCGTGCTGGCCGGCATCGCCTCTCTGGCTAGCGGTAAGTATATATACATAGATACTTTTTT------------------------ATTG----AGATACTTTTTTTTCAGTTGAGATC-----AGTTGAGATTCAACTCAAAATGGCGTAAAGATATTAA----------------------------------------------------------------------AATACTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................................GCTAGCGGTAAGTATATA................................................................................................................................................................................................1812.0020000020
........................................................................................................TTG----AGATACTTTTTTTTCAGTTGAGAT.......................................................................................................................2711.0011000000
..........................................TGGCTAGCGGTAAGTATATATACATA..........................................................................................................................................................................................2611.0010000010
................................................................................................................GATACTTTTTTTTCAGTTGAGAT.......................................................................................................................2311.0010000100
..................GCGTGCTGGCCGGCATCG..........................................................................................................................................................................................................................1811.0010000010
...............TGGGCGTGCTGGCCGGCAT............................................................................................................................................................................................................................1911.0011000000
.............ACTGGGCGTGCTGGCCGGCATC...........................................................................................................................................................................................................................2211.0010000100
.............ACTGGGCGTGCTGGCCGGCATCGC.........................................................................................................................................................................................................................2411.0010000010

Generated: 05/16/2015 at 09:36 PM