ID:

dvi_577

 Coordinate:

scaffold_10322:234058-234208 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-15.2 -15.2 -15.0 -14.9

Flybase annnotation

CDS [Dvir\GJ16082-cds]; exon [dvir_GLEANR_16503:8]; intron [Dvir\GJ16082-in]

Repeatable elements

NameClassFamilyStrand
Helitron-2N1_DVirRCHelitron-

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GGGTCGTAGATGTCTGCTTCTATGCGTTACACATATTACATATCACATTTTAATACCTGCTGTAAGGGTATAAAATGTAATTAGCGAAGGGAAAAAATATTTGTCTATAATTATGATTGCCTCTAAGAGAGAGTGAGGGATTTATACTGTGCCCAAGCTTATCTCAAATATAATCTCGAAACTTATTCAATTTGTCTGCAGCTTTAAAGCGAACTCCGCGCCATTTGACATTTCGGCAACGTCGGCCTTTA
******************************************************************************..((.....(((.(((......(((...........(((((.......((((.(((..(((............)))..)))..)))).....)))))............)))))).)))..))************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528803
follicle cells		 M028
head
 SRR060672
9x160_females_carcasses_total
 M047
female body
 M061
embryo
 SRR060686
Argx9_0-2h_embryos_total
 V116
male body		 SRR060664
9_males_carcasses_total
 SRR060669
160x9_females_carcasses_total
 SRR060679
140x9_testes_total
 SRR060681
Argx9_testes_total
 SRR060687
9_0-2h_embryos_total
 SRR1106725
embryo_14-16h
 SRR1106729
mixed whole adult body
 SRR060654
160x9_ovaries_total
 SRR060671
9x160_males_carcasses_total
 SRR060658
140_ovaries_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060670
9_testes_total
 V047
embryo
 V053
head
..................................................................................................................................................................................................................GAACTCCGCGCCATTTGAC...................... 19 0 1 3.00 3 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................ATTTGACATTTCGGCAACGT......... 20 0 1 2.00 2 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................CCGCGCCATTTGACATTTCGGCAACGTC........ 28 0 1 2.00 2 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................GCGAACTCCGCGCCATTTGA....................... 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................ATTTGACATTTCGGCAACGTCGGCCT... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................GCCATTTGACATTTCGGCAACGTC........ 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................CTTCTTTAAAGCGAACTCCGCGCC............................. 24 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................AATTAGCGAAGGGAAAAA........................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................GACATTTCGGCAACGTCGGCCTTTA 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................CTGCAGCTTTAAAGCGAACTCCG................................. 23 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................TTTGACATTTCGGCAACGTC........ 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................TTTCGGCAACGTCGGCCT... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................AAATATAATCTCGAAACTTATTCAATTTGTCTGCAG.................................................. 36 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................TTGACATTTCGGCAACGTCGGCCTTTA 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................TTGACATTTCGGCAACGTCGGCC.... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................TGATTGCCTCTAAGTCAGAAT..................................................................................................................... 21 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................TTGACATTTCGGCAACGT......... 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................GAATTCCGCGCCATTTGACATTTCGG............... 26 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................CCGCGCCATTTGACATTTCGGC.............. 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................TGGCTGTAAGTGAGAGTGAGG................................................................................................................. 21 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.............................................................................TAATTAGTGACGCGAAAAAA.......................................................................................................................................................... 20 3 17 0.12 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0
.................................................................................................................TGAACGCCTCTAAGTGAGA....................................................................................................................... 19 3 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...................................................AAGACCTACTGTAAGGGT...................................................................................................................................................................................... 18 2 11 0.09 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................TGTTATGAGCTAAGGGAAAA............................................................................................................................................................ 20 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.............................................................................................................ATAATGATTGGCTCTAAG............................................................................................................................ 18 2 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.............................................................................................................ATAAGGATTGCCTCTAAGG........................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.....................................................................................................................TGGCTGTAAGTGAGAGTGAG.................................................................................................................. 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
............................................................................................................GATAAGGATTGCCTCTAAG............................................................................................................................ 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

CCCAGCATCTACAGACGAAGATACGCAATGTGTATAATGTATAGTGTAAAATTATGGACGACATTCCCATATTTTACATTAATCGCTTCCCTTTTTTATAAACAGATATTAATACTAACGGAGATTCTCTCTCACTCCCTAAATATGACACGGGTTCGAATAGAGTTTATATTAGAGCTTTGAATAAGTTAAACAGACGTCGAAATTTCGCTTGAGGCGCGGTAAACTGTAAAGCCGTTGCAGCCGGAAAT
**************************************************..((.....(((.(((......(((...........(((((.......((((.(((..(((............)))..)))..)))).....)))))............)))))).)))..))****************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060669
160x9_females_carcasses_total
........CTACAGACGAAGATACGCAATGTGT.......................................................................................................................................................................................................................... 25 0 3 0.33 1 1 0
......................................................................................................................CGCAGATTCTCTCTAACAC.................................................................................................................. 19 3 20 0.05 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_10322:234008-234258 + dvi_577 GGGTCGTAGATGTCTGCTTCT-ATGCGTTACACATATT-------ACATATCACATTTTAATACCTG-C---------------------TGTAAGGGTATAAAATGTAATTA---------------------------------GCGAAGGGAAA-AAA--TATTT----G------------------------------------T---CTATAATTATGATTGCCTCTAAGAGAGAGTG----AGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTTATAC--------------------------------------TGT----------------------------------------------------GCCCAAGCTTATCT--------------------------------------------------------------------------CAAATATAATCTCGA----------------------------------AACTTATTCAATTT-----------------------------GTCTGCAGCTTTAAAGCGAACTCCGCGCCATTTGACATTTC-----GGCAACGTC------GGCC--------------------------------------------------------------------------------------------TTTA
droMoj3 scaffold_6359:2845771-2846002 + GGGTCTGCGATGATTCCTTCT-GCCCGTTACATACTTT-------TTCA-GAATACCATTATACCCTG-A-TTTCCCATTTTC--AATGGGTTCAGGGTATAATAAAAATAAAT----------------------------------------------A--TATTT---------------------------------------CTTAATGTACAAATTTAA--GATATTAAAAAA----GAATGTTGAATTTGATTGTA------------------------------------TTTAGGCAAGTTTT----T---------------------------------------------------------------------------------------------------------------------------------------------------------C---AAGCAACTAAACGATTTTGT----------------------------------ATGAG-------------------------------CTC------A-----------------------------------------------GCTCA----------------------------------------------------------------------------------------------------------ATTATGTCAAGAGCTATG-------------------------------------------------ATT--------------------------------------------------------------------------------------------GCTA
droGri2 scaffold_15203:5270817-5271069 + GTATTGTAGACGCCTCTTTCA-GTGCGTTACCAACTTC-------ACAA-CAAAATTGGAATACGCT-C---------------------TGTAAGGGTGTAAAAAAGAAGCAAAAA------------------------------------TAATC---AAGT---TTCCG------------------------------------------A---------------CAA------------------------------------------------------------------------------------------AC-A-------------------------------------------------------------------TCAACATGACGCCCA-----------------------------------GATAAAAACG---TTCAGGA--------------------------------------TGC----------------------------------------------------GCCAACGCCAACTCCAA--------AGCTAACGCCGACGCCGGCGTCGCTGCCACTGCAGACAAGATAAGACACATCAACAGCAG-----------------------------------CAGTAGCAGCAGCATCAGTAGCAG-CAGCAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGT
droWil2 scf2_1100000004515:1229915-1230178 + TGGTCAGAAATGCTTCCTTCT-ATGCGTTGCACACTTC-------TGAC-CAAAATTAATATACCCTT-T-T------------------TGCAAGGGTATAAAAAACTGT-A--------TAAACTT------------------GAGGCACGTAA-ATA--CATTT----G--------------------------------------ATTTAAAAATATAC--AGCATTAAGAAA----A----G---------------------------------------------------------------------------------------A---------------------------------------------------------------------------------------------------------------AATTAAGGAATTCA---AGTTATT---TGCTGACC----------------------------------------------------------------------------------AA--------CGCCA------------------------------------------------------------------TAAATGCAATCATAA----------------------------------AATATA-------------------------------------------------------------------TTGG-CCAACA-----CTTTTTCTTGACCAAACACTTGGCCGGAAGTGGACAGCTATAA---------------AATGTGTGC----AT--------------------------------------TAAT
dp5 Unknown_group_71:21323-21601 - GGGTCGGAAACGATTCCTTCT-GGACGTTACACACATCCACTTTTACCA-CAAATCTAATATACCCCA-A-TAC-------TAATTTTGAATATCGGGTATAAAAATTGT------------------------------------GCGCACTGAAA-C--AATTTTC----AACTTTGAGTGCTCATATCTTCTAAACGAAAAGTCC------------------------------------------GAATTTGAAAGTTTAATTTTTAAAAGC---------------------------------TC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGA--------AAC------------TTCTCTATTAGATGCGTATATTCATTGTATCCAAAGCGCTAAAAAAAAATCTCCGACTTTTG-CCACCT-----CTTTTCGTCGAAATCGCCC----------------------------------------------------------------------------------------------CT
droPer2 scaffold_139:38240-38516 - GGGTCGGAAACGATTCCTTCT-GGACGTTACACACATCCACTTTTACCA-CAAATCTAATATACCCCA-A-TAC-------TAATTTTGAGTATCGGGTATAAAAATTGT------------------------------------GCGCACTGAAA-C--AATTTTC----AACTTTGAGTGCTCATATCTTCTAAACGAAAAGTCC------------------------------------------GAATTTGAAAGTTTAATTTTTAAAAGC---------------------------------TC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGA--------AAC------------TTCTCTATTAGATGCGTATATTCATTGTATCCATAGCGCTAAAAAAA--TCTCCGACTTTTG-CCACCT-----CTTTTCGTCGAAATCGCCC----------------------------------------------------------------------------------------------CT
droAna3 scaffold_13111:821058-821288 - GGGTAGGAGATGTCTCCTTCA-CTGCGTTGCACACTTT-------TGAC-CAAAATTATAATACCCT-C---------------------TGCAAGGGTATAATTAAATAAGTAATGTAAACA-----AAATTGT-----------ATGTATTGTGA-C--ATGTACC----GAATATTCGTACG-ATTTCTTAGAGCGGAACAATTT------------------------------------------AAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATCAAGATTATTTGTTTACTCAAGA--------AAC------------CTATCCCTC-GAAGTCCGCAGGCCTGTAGACCGGAGCGCTGT-----------------------------------------------------------------------------------------------------------------------------------------------TTGA
droBip1 scf7180000396759:338795-339017 + GGGTCGGAGATGTCTCCTTCA-CTGCGTTGCACACTTT-------TGAC-CAAAATTATAATACCCT-C---------------------TGCAAGGGTATAATAATAAGT-G--------TG--------------------------ACATTATA-AAA--TATTA----T------------------------------------T---TTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTACACTAAATCTTGTTAAGCATAATGCAACTG-ATAAGCGGGTAAATAAAGC--------------------------------------TGTGACCTA---------------------------------------------------AGATTTCAT--------------------------------------------------------------------------TAAAACCAAACTTGA------AATTATTT-------------------------ATTCGATTTT-----------------------------TGTAAA----------------------------------------------------TTTCCA----------------------------------------------------------------------------------------------AA
droKik1 scf7180000302279:8743-8955 + GGGTCGGAAACGTCTCCTTCA-CTGCGTTGCAAACTTC-------TGAC-TGAAATTATAATACCCT------------------------GCAAGGGTATAAAAAAAATAGAA-T----------------------------------------A-TAA--TATAA----A------------------------------------T---ATATAAATAAAAAC----------------GCATGC---------------------------------------------------------------------------------------AAAATTAGGAGAGAACAAAATATATATAAAAAAATATAATATTGTGAGGAGTCGTCTGA---------------CTCCCCACCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------TACT---------------------------------------------------GGCGGCGGCACCAACATC--------------------------------------------------------------------------------------------------------------------------------------------------AGCC--------------------------------------------------------------------------------------------TTAA
droFic1 scf7180000453851:108935-109159 - GGGTCTGAGGTGTCTCCTTCA-CTGCGTTGCAAACTTC-------TGAC-TGAAATTATAATACCCTT-T-TGC-------TC-------GGTAAGGGTATAACAAACAAAGA------------------------GAAAAGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTTA---------------------------------------------------------------------------------------------------------------------------------------------AAACAATTTTGGAACATC----TTTATTATTAAATTTATTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGATATT-----------------------------AT--------------------------------------------------TGGATTAAATACATATACTGAATTTTACCTCATTATGATTTTTATATATATAAAATTAATGTATATA-------------------------------TTT---TTAA
droEle1 scf7180000489675:19863-20098 + GGGTCGGAGATGTCTCCTTCA-CTGCGTTGCAAACTTC-------TGAC-TGAAATTATAATACCCT-C---------------------TGCAAGGGTATAAAATGAACT-A---------------------------------------------------------------------------------AAAAAGAAAATTAC------------------------------------------AAAATAGAAAAGTTACATTTAAAAAGAATAATTATATATTTTTATTGTTTCCATTGGAGCTAT----ATGATAT---------------------------------------------------------------------------------------------------------------------------------------------AGTCG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCGATTTT-----------------------------AATGAAACTTAAACCGCAATTTCGAAATATTTAACCATTA-----CTAAAAGTC-----------------------GAAG---------------------------------------------------------------------------AACA
droRho1 scf7180000766314:149610-149835 + GGGTCGGAGATGCCTCCTTCA-CTGCGTTGCACACTTT-------TGAC-CAAAATTATAATACTCT-C---------------------TGCAAGGGTATAAAAATTATT-T--------TC-----A------------------A----------AAA--TACTT--------------ACTTATTTCCT--------------------TTCTGG------T-------------GATAG----AGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTAAGAAAAGC--------------------------------------ACCCAAATATGATTTATTTTTAACTATCTGGCATCGACAAAAAGCTTTCAAATAGACTTTTGGTCTTTTTAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTAC-----TGGCGAGCC------GAGC--------------------------------------------------------------------------------------------TTTC
droBia1 scf7180000301140:27362-27550 + GGGTCGGAAACGTCTCTTTCA-CTGCGTTGCAAACTTC-------TGAC-TGAAATCATTATACCCT-C---------------------TGCAAGGGTATAAAAAACAGAGA-------------------------------------CGGGTA--GAG--TTTTT----T------------------------------------C---TTGTAATTTAAAAAATTCTTGATCAAAATAGAATGG---------------------------------------------------------------------------------------ATAATAATGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGCAAATTTTATC--------------------------------------------------------------------------AAAAAATTAATTTGT----------------------------------AA--TACTCAGTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCT
droTak1 scf7180000415346:62094-62284 + GGGTCGGAAACGTCTCCTTCA-CTGCGTTGCAAACTTC-------TGAC-TGAAATCATAATACCCT-C---------------------TGCAAGGGTATAAAAATGTAT-T--------TA-----A-----------------------------AAA--TATGTGTT------------------------------------------TTA---------------GAA------------------------------------------------------------------------------------------TT-T-------------------------------------------------------------------TGTACATTTTGCTTA-----------------------------------AAAAATAATGTGACTTATAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAAAAATAATTAGTTCAATAAAATAACCATTAAATTTAA-CAATCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------TCTG
droEug1 scf7180000409602:3324-3528 + GGGTCGGAAACGT-TCCTTCT-ACCTGTTACATACTTT-------TCAA-CGAATCTAGTATACCCTT-T-TAC-------TC--TACGAGTAACGGTTATAATAATATAA-ATAAA------------------------------------CATGC---TAGT---TTTCAT---------------------------------------------------------CTAAGAAA-----------------------------------GGC---------------------------------TCTAGGA-------CTAATTAAATCGACTCCAATTA-----------------------ATATAA-------------------------------------------------------------------TTT-ATAATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGCTGAACTACCTCC-----------------------------------A------------------------------------------GCTTA-------------TAAAATTAA----------------------------TT-----------------------------------------------------------------------------------------------------------TCGC
dm3 chr3RHet:2382525-2382699 - ---TCGGAAACGCTTCCTTCTTGCCTGTTACATACTTT-------TCAA-CGAATCTAGTATACATT-TTTTAT-------TC--TACGAGTAAAGGGTATAATAAAACAAGA------------------------GCGAATGCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGTTG---------------------------------------------------------------------------------------------------------------------------------------------AGTTCCC---CGACAATCAGATAACTGTTA----------------------------------CTCAG-------------------------------CTA------G-----------------------------------------------TGTCA----------------------ATTCGAACTCGA----------------------------------AATTTCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATTTT
droSim2 3l:19116511-19116726 + TGGTCGGAAACGCTTCCTTCT-GCCTGTTACATACTTT-------TCAA-CGAATCTAGTGTACTCTT-T-TAC-------TC--TACGAGTAACGGGTATAAAATGTACA-A----------------------GAGAGAACGCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAGTAA---------------------------------------------------------------------------------------------------------------------------------------------AGTTATT---CGACTATCAGATACCAGATACCA-------------------------------------------------------------------CTA------G-----------------------------------------------TGGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------AG-----------------------TGGGAGATAGAAC---------------AAAATTTAC----ACAAATTATATGAAACAAAATTTAAAAATTTTTTTTTTCAATTT
droSec2 scaffold_29:163146-163360 + TGGTCGGAAACGCTTTCTTCT-GCCTGTTTTCAACTTT-------TCAA-CGAATCTAGTTTACTCTT-T-TAC-------TC--TACGAGTAACGGGTATAAAATGTACA-A----------------------GAGAGAACGCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAGTAA---------------------------------------------------------------------------------------------------------------------------------------------AGTTATT---CGACTATCAGATACCAGATACCA-------------------------------------------------------------------CTA------G-----------------------------------------------TGGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------AG-----------------------TGGGAGATAGAAC---------------AAAATTTAC----ACAAATTATATGAAACAAAATTTAAAAATTTT-TTTTTCAATTT
droYak3 v2_chr2L_random_028:1084551-1084816 - TGGTCGGAAACGCTTCCTTCT-GCCTGTTACATACTTT-------TCAA-CGAATCTAGTATACCCTT-T-TAC-------TC--TACGAGTAACGGGTATAATAAATAATAAA-T----------AT-------------------------CATTC--------------------------------------------------A----TTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTACATTAAATAATGTAAGGCACTTCGTGCCTCAATAATTGTGCAACTTA---ACTACCA---CGCCCACA----------------------------------------------------------------------------------CT--------TTTTA------------------------------------------------------------------AAAATGTTTTCATATGTTTTAAATAATTT--TTACTCTTGT--------AAA--------T---TTCTCT--T-GATTTGCCAAA---------------------------------------------AATCTTTTTGCAACGCC------AACT--------------------------------------------------------------------------------------------GTAA
droEre2 scaffold_4784:23766094-23766296 + GGTTCGGAAAAACTTCATTCT-ACCTGTTATAAACA-----------AA-CGAATCTAGTCTACCTT--T-TAG-------TC--AACGAGGAAGGGGTATAAAAAAATAA-A--------GT-----A------------------AAAATTGTAA-T--TAATTTT----AT---------------------------------------TTGTGA------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATT----TTAAGTTATCAATATTAAACCGAAGAAATTAAATTCCTATTCCCCAC-------------------------------CT----T--------TAAT-----------------------------------------------------------------ATTTAAACTATA----------------------------------ATC-----------------------------------------------------------------------------------------------------------------------------------------------------TTAC----ACAAT-----------------------------------TTAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
GGGTCGTAGATGTCTGCTTCT-ATGCGTTACACATATT-------ACATATCACATTTTAATACCTG-C---------------------TGTAAGGGTATAAAATGTAATTA---------------------------------GCGAAGGGAAA-AAA--TATTT----G------------------------------------T---CTATAATTATGATTGCCTCTAAGAGAGAGTG----AGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTTATAC--------------------------------------TGT----------------------------------------------------GCCCAAGCTTATCT--------------------------------------------------------------------------CAAATATAATCTCGA----------------------------------AACTTATTCAATTT-----------------------------GTCTGCAGCTTTAAAGCGAACTCCGCGCCATTTGACATTTC-----GGCAACGTC------GGCC--------------------------------------------------------------------------------------------TTTASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTCCGCGCCATTTGAC.............................................................................................................................1913.003000000000000000000000010000000000000000000000000000000000000002
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGACATTTC-----GGCAACGT...........................................................................................................2012.002000100000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCGCCATTTGACATTTC-----GGCAACGTC------....................................................................................................2812.002000000000000000000000000000000000000110000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAACTCCGCGCCATTTGA..............................................................................................................................2012.002000000000000000000000000000000000000000000000000000000000000002
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGACATTTC-----GGCAACGTC------GGCC--------------------------------------------------------------------------------------------T...2611.001010000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCATTTGACATTTC-----GGCAACGTC------....................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................AATTA---------------------------------GCGAAGGGAAA-AA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000001000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACATTTC-----GGCAACGTC------GGCC--------------------------------------------------------------------------------------------TTTA2511.001000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAGCTTTAAAGCGAACTCCG........................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGACATTTC-----GGCAACGTC------....................................................................................................2011.001000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTC-----GGCAACGTC------GGCC--------------------------------------------------------------------------------------------T...1811.001010000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATATAATCTCGA----------------------------------AACTTATTCAATTT-----------------------------GTCTGCAG.........................................................................................................................................................3611.001000000000000000000000000000000000000000000000000000001000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACATTTC-----GGCAACGTC------GGCC--------------------------------------------------------------------------------------------TTTA2711.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACATTTC-----GGCAACGTC------GGCC--------------------------------------------------------------------------------------------....2311.001000000000000000000010000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACATTTC-----GGCAACGT...........................................................................................................1811.001000000000000000000000000000000000000100000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCGCCATTTGACATTTC-----GGC................................................................................................................2211.001000000000000000000000000000001000000000000000000000000000000000
droMoj3
GGGTCTGCGATGATTCCTTCT-GCCCGTTACATACTTT-------TTCA-GAATACCATTATACCCTG-A-TTTCCCATTTTC--AATGGGTTCAGGGTATAATAAAAATAAAT----------------------------------------------A--TATTT---------------------------------------CTTAATGTACAAATTTAA--GATATTAAAAAA----GAATGTTGAATTTGATTGTA------------------------------------TTTAGGCAAGTTTT----T---------------------------------------------------------------------------------------------------------------------------------------------------------C---AAGCAACTAAACGATTTTGT----------------------------------ATGAG-------------------------------CTC------A-----------------------------------------------GCTCA----------------------------------------------------------------------------------------------------------ATTATGTCAAGAGCTATG-------------------------------------------------ATT--------------------------------------------------------------------------------------------GCTASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....CTGCGATGATTCCTTCT-GCCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102000020
droGri2
GTATTGTAGACGCCTCTTTCA-GTGCGTTACCAACTTC-------ACAA-CAAAATTGGAATACGCT-C---------------------TGTAAGGGTGTAAAAAAGAAGCAAAAA------------------------------------TAATC---AAGT---TTCCG------------------------------------------A---------------CAA------------------------------------------------------------------------------------------AC-A-------------------------------------------------------------------TCAACATGACGCCCA-----------------------------------GATAAAAACG---TTCAGGA--------------------------------------TGC----------------------------------------------------GCCAACGCCAACTCCAA--------AGCTAACGCCGACGCCGGCGTCGCTGCCACTGCAGACAAGATAAGACACATCAACAGCAG-----------------------------------CAGTAGCAGCAGCATCAGTAGCAG-CAGCAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACATCAACAGCAG-----------------------------------CAGTA........................................................................................................................................................................................................................1930.33110
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAG-----------------------------------CAGTAGCAGCAGCA...............................................................................................................................................................................................................20200.05110
droWil2
TGGTCAGAAATGCTTCCTTCT-ATGCGTTGCACACTTC-------TGAC-CAAAATTAATATACCCTT-T-T------------------TGCAAGGGTATAAAAAACTGT-A--------TAAACTT------------------GAGGCACGTAA-ATA--CATTT----G--------------------------------------ATTTAAAAATATAC--AGCATTAAGAAA----A----G---------------------------------------------------------------------------------------A---------------------------------------------------------------------------------------------------------------AATTAAGGAATTCA---AGTTATT---TGCTGACC----------------------------------------------------------------------------------AA--------CGCCA------------------------------------------------------------------TAAATGCAATCATAA----------------------------------AATATA-------------------------------------------------------------------TTGG-CCAACA-----CTTTTTCTTGACCAAACACTTGGCCGGAAGTGGACAGCTATAA---------------AATGTGTGC----AT--------------------------------------TAATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................TTCT-ATGCGTTGCACACTTC-------TGAC-CA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.10200020
....................T-ATGCGTTGCACACTTC-------TGAC-CAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.10200020
.......................TGCGTTGCACACTTC-------TGAC-CA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
...TCAGAAATGCTTCCTTCT-ATGCGTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
dp5
GGGTCGGAAACGATTCCTTCT-GGACGTTACACACATCCACTTTTACCA-CAAATCTAATATACCCCA-A-TAC-------TAATTTTGAATATCGGGTATAAAAATTGT------------------------------------GCGCACTGAAA-C--AATTTTC----AACTTTGAGTGCTCATATCTTCTAAACGAAAAGTCC------------------------------------------GAATTTGAAAGTTTAATTTTTAAAAGC---------------------------------TC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGA--------AAC------------TTCTCTATTAGATGCGTATATTCATTGTATCCAAAGCGCTAAAAAAAAATCTCCGACTTTTG-CCACCT-----CTTTTCGTCGAAATCGCCC----------------------------------------------------------------------------------------------CTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...TCGGAAACGATTCCTTCT-GGACGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420140.9028180281800000000
.............TTCCTTCT-GGACGTTACACACATCCACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28201.703403400000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCGTCGAAATCGCCC----------------------------------------------------------------------------------------------..1811.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGTATATTCATTGTATCCAAAGCGC......................................................................................................................................................2730.6720000000020
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTATATTCATTGTATCCAAAGCG.......................................................................................................................................................2530.3310100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTATATTCATTGTATCCAAAGC........................................................................................................................................................2430.3310100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTATATTCATTGTATCCAAAGCGC......................................................................................................................................................2630.3310100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCTCCGACTTTTG-CCACCT-----...................................................................................................................2140.2510100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGACTTTTG-CCACCT-----CTTTTCGTCG.........................................................................................................2750.2010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTG-CCACCT-----CTTTTCGTCGAAA......................................................................................................2360.1710100000000
.............................................................................................................T------------------------------------GCGCACTGAAA-C--AATTTTC----AAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2460.1710000000100
................CTTCT-GGACGTTACACACATCCACTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.1020200000000
...........................................TTACCA-CAAATCTAATATACCCCA-A-T...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.1020000000020
............ATTCCTTCT-GGACGTTAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510100000000
...........GATTCCTTCT-GGACGTTACACACATCCAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.0510000000100
droPer2
GGGTCGGAAACGATTCCTTCT-GGACGTTACACACATCCACTTTTACCA-CAAATCTAATATACCCCA-A-TAC-------TAATTTTGAGTATCGGGTATAAAAATTGT------------------------------------GCGCACTGAAA-C--AATTTTC----AACTTTGAGTGCTCATATCTTCTAAACGAAAAGTCC------------------------------------------GAATTTGAAAGTTTAATTTTTAAAAGC---------------------------------TC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGA--------AAC------------TTCTCTATTAGATGCGTATATTCATTGTATCCATAGCGCTAAAAAAA--TCTCCGACTTTTG-CCACCT-----CTTTTCGTCGAAATCGCCC----------------------------------------------------------------------------------------------CTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
GGGTAGGAGATGTCTCCTTCA-CTGCGTTGCACACTTT-------TGAC-CAAAATTATAATACCCT-C---------------------TGCAAGGGTATAATTAAATAAGTAATGTAAACA-----AAATTGT-----------ATGTATTGTGA-C--ATGTACC----GAATATTCGTACG-ATTTCTTAGAGCGGAACAATTT------------------------------------------AAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATCAAGATTATTTGTTTACTCAAGA--------AAC------------CTATCCCTC-GAAGTCCGCAGGCCTGTAGACCGGAGCGCTGT-----------------------------------------------------------------------------------------------------------------------------------------------TTGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA--------AAC------------CTATCCCTC-GAAGT..............................................................................................................................................................................1911.001001000
...................................TTT-------TGAC-CAAAATTATAATACCCT-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.153030000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-GAAGTCCGCAGGCCTGTAG................................................................................................................................................................20200.051100000
droBip1
GGGTCGGAGATGTCTCCTTCA-CTGCGTTGCACACTTT-------TGAC-CAAAATTATAATACCCT-C---------------------TGCAAGGGTATAATAATAAGT-G--------TG--------------------------ACATTATA-AAA--TATTA----T------------------------------------T---TTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTACACTAAATCTTGTTAAGCATAATGCAACTG-ATAAGCGGGTAAATAAAGC--------------------------------------TGTGACCTA---------------------------------------------------AGATTTCAT--------------------------------------------------------------------------TAAAACCAAACTTGA------AATTATTT-------------------------ATTCGATTTT-----------------------------TGTAAA----------------------------------------------------TTTCCA----------------------------------------------------------------------------------------------AASizeHit CountTotal NormTotal
No Reads
droKik1
GGGTCGGAAACGTCTCCTTCA-CTGCGTTGCAAACTTC-------TGAC-TGAAATTATAATACCCT------------------------GCAAGGGTATAAAAAAAATAGAA-T----------------------------------------A-TAA--TATAA----A------------------------------------T---ATATAAATAAAAAC----------------GCATGC---------------------------------------------------------------------------------------AAAATTAGGAGAGAACAAAATATATATAAAAAAATATAATATTGTGAGGAGTCGTCTGA---------------CTCCCCACCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------TACT---------------------------------------------------GGCGGCGGCACCAACATC--------------------------------------------------------------------------------------------------------------------------------------------------AGCC--------------------------------------------------------------------------------------------TTAASizeHit CountTotal NormTotal
No Reads
droFic1
GGGTCTGAGGTGTCTCCTTCA-CTGCGTTGCAAACTTC-------TGAC-TGAAATTATAATACCCTT-T-TGC-------TC-------GGTAAGGGTATAACAAACAAAGA------------------------GAAAAGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACTTA---------------------------------------------------------------------------------------------------------------------------------------------AAACAATTTTGGAACATC----TTTATTATTAAATTTATTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGATATT-----------------------------AT--------------------------------------------------TGGATTAAATACATATACTGAATTTTACCTCATTATGATTTTTATATATATAAAATTAATGTATATA-------------------------------TTT---TTAASizeHit CountTotal NormTotal
No Reads
droEle1
GGGTCGGAGATGTCTCCTTCA-CTGCGTTGCAAACTTC-------TGAC-TGAAATTATAATACCCT-C---------------------TGCAAGGGTATAAAATGAACT-A---------------------------------------------------------------------------------AAAAAGAAAATTAC------------------------------------------AAAATAGAAAAGTTACATTTAAAAAGAATAATTATATATTTTTATTGTTTCCATTGGAGCTAT----ATGATAT---------------------------------------------------------------------------------------------------------------------------------------------AGTCG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCGATTTT-----------------------------AATGAAACTTAAACCGCAATTTCGAAATATTTAACCATTA-----CTAAAAGTC-----------------------GAAG---------------------------------------------------------------------------AACASizeHit CountTotal NormTotal
No Reads
droRho1
GGGTCGGAGATGCCTCCTTCA-CTGCGTTGCACACTTT-------TGAC-CAAAATTATAATACTCT-C---------------------TGCAAGGGTATAAAAATTATT-T--------TC-----A------------------A----------AAA--TACTT--------------ACTTATTTCCT--------------------TTCTGG------T-------------GATAG----AGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTAAGAAAAGC--------------------------------------ACCCAAATATGATTTATTTTTAACTATCTGGCATCGACAAAAAGCTTTCAAATAGACTTTTGGTCTTTTTAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTAC-----TGGCGAGCC------GAGC--------------------------------------------------------------------------------------------TTTCSizeHit CountTotal NormTotal
No Reads
droBia1
GGGTCGGAAACGTCTCTTTCA-CTGCGTTGCAAACTTC-------TGAC-TGAAATCATTATACCCT-C---------------------TGCAAGGGTATAAAAAACAGAGA-------------------------------------CGGGTA--GAG--TTTTT----T------------------------------------C---TTGTAATTTAAAAAATTCTTGATCAAAATAGAATGG---------------------------------------------------------------------------------------ATAATAATGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGCAAATTTTATC--------------------------------------------------------------------------AAAAAATTAATTTGT----------------------------------AA--TACTCAGTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTSizeHit CountTotal NormTotal
No Reads
droTak1
GGGTCGGAAACGTCTCCTTCA-CTGCGTTGCAAACTTC-------TGAC-TGAAATCATAATACCCT-C---------------------TGCAAGGGTATAAAAATGTAT-T--------TA-----A-----------------------------AAA--TATGTGTT------------------------------------------TTA---------------GAA------------------------------------------------------------------------------------------TT-T-------------------------------------------------------------------TGTACATTTTGCTTA-----------------------------------AAAAATAATGTGACTTATAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAAAAATAATTAGTTCAATAAAATAACCATTAAATTTAA-CAATCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------TCTGSizeHit CountTotal NormTotal
No Reads
droEug1
GGGTCGGAAACGT-TCCTTCT-ACCTGTTACATACTTT-------TCAA-CGAATCTAGTATACCCTT-T-TAC-------TC--TACGAGTAACGGTTATAATAATATAA-ATAAA------------------------------------CATGC---TAGT---TTTCAT---------------------------------------------------------CTAAGAAA-----------------------------------GGC---------------------------------TCTAGGA-------CTAATTAAATCGACTCCAATTA-----------------------ATATAA-------------------------------------------------------------------TTT-ATAATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGCTGAACTACCTCC-----------------------------------A------------------------------------------GCTTA-------------TAAAATTAA----------------------------TT-----------------------------------------------------------------------------------------------------------TCGCSizeHit CountTotal NormTotal
No Reads
dm3
---TCGGAAACGCTTCCTTCTTGCCTGTTACATACTTT-------TCAA-CGAATCTAGTATACATT-TTTTAT-------TC--TACGAGTAAAGGGTATAATAAAACAAGA------------------------GCGAATGCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGTTG---------------------------------------------------------------------------------------------------------------------------------------------AGTTCCC---CGACAATCAGATAACTGTTA----------------------------------CTCAG-------------------------------CTA------G-----------------------------------------------TGTCA----------------------ATTCGAACTCGA----------------------------------AATTTCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATTTTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................................................................AACAAGA------------------------GCGAATGCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................TAAAACAAGA------------------------GCGAATGCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................ATAAAACAAGA------------------------GCGAATGCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................AACAAGA------------------------GCGAATGCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGTTG---------------------------------------------------------------------------------------------------------------------------------------------AGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................TGCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGTTG---------------------------------------------------------------------------------------------------------------------------------------------AGTTCCC---CG......................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
....................................TT-------TCAA-CGAATCTAGTATACATT-TTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................TTT-------TCAA-CGAATCTAGTATACAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCAGATAACTGTTA----------------------------------CTCAG-------------------------------CTA------G-----------------------------------------------.....................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................CAAGA------------------------GCGAATGCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGTTG---------------------------------------------------------------------------------------------------------------------------------------------AG................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTA------G-----------------------------------------------TGTCA----------------------ATTCGAACT.................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................TATAATAAAACAAGA------------------------GCGAATGCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGATAACTGTTA----------------------------------CTCAG-------------------------------CTA------G-----------------------------------------------TGT..................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................TG---------------------------------------------------------------------------------------------------------------------------------------------AGTTCCC---CGACAATCAGATAACTGT......................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...............................................................CATT-TTTTAT-------TC--TACGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA------G-----------------------------------------------TGTCA----------------------ATTCGAACTCGA----------------------------------AATT........................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................TAAAACAAGA------------------------GCGAATGCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................TT-------TCAA-CGAATCTAGTATACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2141.0040000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTA----------------------------------CTCAG-------------------------------CTA------G-----------------------------------------------TGTCA----------------------AT........................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAACTCGA----------------------------------AATTTCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATTTT2421.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................TTTAT-------TC--TACGAGTAAAGGGTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................TTAT-------TC--TACGAGTAAAGGGTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................TTAT-------TC--TACGAGTAAAGGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAACTCGA----------------------------------AATTTCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATT..2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------------------ATTCGAACTCGA----------------------------------AATTTCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATTT.2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TGTTACATACTTT-------TCAA-CGAATCTAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TACATACTTT-------TCAA-CGAATCTAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
...........................TTACATACTTT-------TCAA-CGAATCTAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.2040000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................TT-------TCAA-CGAATCTAGTATAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TTACATACTTT-------TCAA-CGAATCTAGTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TACTTT-------TCAA-CGAATCTAGTAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TGCCTGTTACATACTTT-------TCAA-CGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CTGTTACATACTTT-------TCAA-CGAATC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TACTTT-------TCAA-CGAATCTAGTATA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGA----------------------------------AATTTCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATTT.18120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TGTTACATACTTT-------TCAA-CGAAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CTGTTACATACTTT-------TCAA-CGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TTACATACTTT-------TCAA-CGAATCTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................ATACTTT-------TCAA-CGAATCTAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
........................CTGTTACATACTTT-------TCAA-CGAATCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TGGTCGGAAACGCTTCCTTCT-GCCTGTTACATACTTT-------TCAA-CGAATCTAGTGTACTCTT-T-TAC-------TC--TACGAGTAACGGGTATAAAATGTACA-A----------------------GAGAGAACGCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAGTAA---------------------------------------------------------------------------------------------------------------------------------------------AGTTATT---CGACTATCAGATACCAGATACCA-------------------------------------------------------------------CTA------G-----------------------------------------------TGGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------AG-----------------------TGGGAGATAGAAC---------------AAAATTTAC----ACAAATTATATGAAACAAAATTTAAAAATTTTTTTTTTCAATTTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................TT-------TCAA-CGAATCTAGTGTACTCTT-T-............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25532.20161006700364044280000000
....................................TT-------TCAA-CGAATCTAGTGTACTCTT-..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2457.803900014089971000000
....................T-GCCTGTTACATACTTT-------TCAA-CGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25204.95990000000031680000000
....................................TT-------TCAA-CGAATCTAGTGTACTCTT-T-T...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2652.801400010043240000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT---CGACTATCAGATACCAGAT.....................................................................................................................................................................................................................................................................................................................................................................................................................2122.00400004000000000000
...................CT-GCCTGTTACATACTTT-------TCAA-CGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26201.6032000000003200000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGATACCAGATACCA-------------------------------------------------------------------CTA------G-----------------------------------------------TGGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------A.............................................................................................................2621.50300000012000000000
..................................................................................................................................................................................................................................................................................................................................AA---------------------------------------------------------------------------------------------------------------------------------------------AGTTATT---CGACTATCAGATACCAGA......................................................................................................................................................................................................................................................................................................................................................................................................................2721.50300002000010000000
.................................................................................................................................................T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAGTAA---------------------------------------------------------------------------------------------------------------------------------------------AGTTATT---CGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................1921.00200002000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA------G-----------------------------------------------TGGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------AG-----------------------TGGGAGATAG...........................................................................1921.00200002000000000000
.................................................................................TC--TACGAGTAACGGGTATAAAATGTACA-...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000001000000
.............TTCCTTCT-GCCTGTTACATACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.9018000000018000000000
....................T-GCCTGTTACATACTTT-------TCAA-CGAATC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.701400000077000000000
....................................TT-------TCAA-CGAATCTAGTGTACTCTT-T-TAC-------T.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2930.67200000002000000000
....................................TT-------TCAA-CGAATCTAGTGTACTCTT-T-TA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2730.67200000000100010000
...................CT-GCCTGTTACATACTTT-------TCAA-CGAATC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.651300000071410000000
.................TTCT-GCCTGTTACATACTTT-------TCAA-CGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.601200000000470010000
............................................................................................................................................AACGCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAGTAA---------------------------------------------------------------------------------------------------------------------------------------------AGTTATT---CGACTATCAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................3120.50100000010000000000
.........................................................................................................TGTACA-A----------------------GAGAGAACGCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAGTAA---------------------------------------------------------------------------------------------------------------------------------------------AGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................2820.50100000000010000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCAGATACCA-------------------------------------------------------------------CTA------G-----------------------------------------------TGGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------AG-----------------------TGGG.................................................................................2620.50100000000001000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------AG-----------------------TGGGAGATAGAAC---------------AAAAT....................................................2420.50100000001000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT---CGACTATCAGATACCAGA......................................................................................................................................................................................................................................................................................................................................................................................................................2020.50100000010000000000
........................CTGTTACATACTTT-------TCAA-CGAATC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.45900020012022000000
...................CT-GCCTGTTACATACTTT-------TCAA-CGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.45900000000900000000
.............................ACATACTTT-------TCAA-CGAATCTAGTGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25100.40400000000103000000
...................................TTT-------TCAA-CGAATCTAGTGTACTCTT-T-............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2650.40200000001010000000
.................................................................................TC--TACGAGTAACGGGTATAAAATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2430.33100000001000000000
....................................TT-------TCAA-CGAATCTAGTGTACTCTT-T-TAC-------TC--..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3030.33100000010000000000
..................TCT-GCCTGTTACATACTTT-------TCAA-CGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.30600000001050000000
....................T-GCCTGTTACATACTTT-------TCAA-CGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.30600000006000000000
........................................................TAGTGTACTCTT-T-TAC-------T.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1740.25100000000010000000
.................................................................................TC--TACGAGTAACGGGTATAAAAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2380.25200000020000000000
...................................TTT-------TCAA-CGAATCTAGTGTACTCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2450.20100100000000000000
.....................................T-------TCAA-CGAATCTAGTGTACTCTT-T-............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2450.20100010000000000000
....................................TT-------TCAA-CGAATCTAGTGTACTCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2350.20100000001000000000
...................................................GAATCTAGTGTACTCTT-T-T...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1960.17100000000001000000
.............TTCCTTCT-GCCTGTTACATACTTT-------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.15300000010200000000
.................................................................................TC--TACGAGTAACGGGTATA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.15300000000003000000
..................TCT-GCCTGTTACATACTTT-------TCAA-CGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.15300000000200001000
.............TTCCTTCT-GCCTGTTACATACTTT-------TCAA-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.15300000002100000000
.................TTCT-GCCTGTTACATACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.15300000030000000000
................CTTCT-GCCTGTTACATACTTT-------TCAA-CG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.10200000000020000000
..............TCCTTCT-GCCTGTTACATACTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.10200000000020000000
................CTTCT-GCCTGTTACATACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.10200000020000000000
..................................................................TT-T-TAC-------TC--TACGAGTAACGGGTATA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.10200000000002000000
.............TTCCTTCT-GCCTGTTACATACTTT-------TCAA-C................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.10200000020000000000
.............TTCCTTCT-GCCTGTTACATA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.10200000000200000000
.............................ACATACTTT-------TCAA-CGAATCTAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.10200000000200000000
.............................................................TACTCTT-T-TAC-------TC--TACGAGTAACGGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26120.08100000000100000000
....................................TT-------TCAA-CGAATCTAGTGTA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19150.07100000000001000000
....................................TT-------TCAA-CGAATCTAGTGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18150.07100000000001000000
TGGTCGGAAACGCTTCCTTCT-GCCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100010000000000000
..............TCCTTCT-GCCTGTTACATA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100000001000000000
................CTTCT-GCCTGTTACATACTTT-------TCAA-C................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100000000010000000
..............TCCTTCT-GCCTGTTACATACTTT-------TCAA-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05100000000010000000
.............TTCCTTCT-GCCTGTTACATAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100000000100000000
...................................................................T-T-TAC-------TC--TACGAGTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15200.05100000000001000000
....................T-GCCTGTTACATACTTT-------TCAA-CGAAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100000001000000000
..................TCT-GCCTGTTACATACTTT-------TCAA-CGAATC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.05100000000100000000
.........................TGTTACATACTTT-------TCAA-CGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100000001000000000
..........................................................................................GTAACGGGTATAAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15200.05100000001000000000
........................................................................AC-------TC--TACGAGTAACGGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100000000001000000
.............TTCCTTCT-GCCTGTTACATACTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100000000010000000
................CTTCT-GCCTGTTACATACTTT-------TCAA-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100000000100000000
........................CTGTTACATACTTT-------TCAA-CGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100000000010000000
.........ACGCTTCCTTCT-GCCTGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100000000001000000
...........................TTACATACTTT-------TCAA-CGAATCTAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100000000010000000
.............TTCCTTCT-GCCTGTTACATACTTT-------TCAA-CG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................30200.05100000001000000000
..................TCT-GCCTGTTACATACTTT-------TCAA-CG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100000000100000000
..............TCCTTCT-GCCTGTTACATACTTT-------T.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100000000010000000
..........................GTTACATACTTT-------TCAA-CGAATCTAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100100000000000000
.........................TGTTACATACTTT-------TCAA-CGAATCTAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05100000000010000000
..........................GTTACATACTTT-------TCAA-CGAATC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100000000100000000
droSec2
TGGTCGGAAACGCTTTCTTCT-GCCTGTTTTCAACTTT-------TCAA-CGAATCTAGTTTACTCTT-T-TAC-------TC--TACGAGTAACGGGTATAAAATGTACA-A----------------------GAGAGAACGCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAGTAA---------------------------------------------------------------------------------------------------------------------------------------------AGTTATT---CGACTATCAGATACCAGATACCA-------------------------------------------------------------------CTA------G-----------------------------------------------TGGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------AG-----------------------TGGGAGATAGAAC---------------AAAATTTAC----ACAAATTATATGAAACAAAATTTAAAAATTTT-TTTTTCAATTTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................................................TCTAGTTTACTCTT-T-TAC-------TC--T.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.1310001
.......................................................................TAC-------TC--TACGAGTAACGGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0511000
...................................................................T-T-TAC-------TC--TACGAGTAACGGGTATAAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510010
droYak3
TGGTCGGAAACGCTTCCTTCT-GCCTGTTACATACTTT-------TCAA-CGAATCTAGTATACCCTT-T-TAC-------TC--TACGAGTAACGGGTATAATAAATAATAAA-T----------AT-------------------------CATTC--------------------------------------------------A----TTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTACATTAAATAATGTAAGGCACTTCGTGCCTCAATAATTGTGCAACTTA---ACTACCA---CGCCCACA----------------------------------------------------------------------------------CT--------TTTTA------------------------------------------------------------------AAAATGTTTTCATATGTTTTAAATAATTT--TTACTCTTGT--------AAA--------T---TTCTCT--T-GATTTGCCAAA---------------------------------------------AATCTTTTTGCAACGCC------AACT--------------------------------------------------------------------------------------------GTAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAA---------------------------------------------AATCTTTTTGCAACGCC------A...................................................................................................2411.00100010000000
.............TTCCTTCT-GCCTGTTACATACTTT-------TCAA-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.7014014000000000
........................................................................AC-------TC--TACGAGTAACGGGTATAATAAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000000000
droEre2
GGTTCGGAAAAACTTCATTCT-ACCTGTTATAAACA-----------AA-CGAATCTAGTCTACCTT--T-TAG-------TC--AACGAGGAAGGGGTATAAAAAAATAA-A--------GT-----A------------------AAAATTGTAA-T--TAATTTT----AT---------------------------------------TTGTGA------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATT----TTAAGTTATCAATATTAAACCGAAGAAATTAAATTCCTATTCCCCAC-------------------------------CT----T--------TAAT-----------------------------------------------------------------ATTTAAACTATA----------------------------------ATC-----------------------------------------------------------------------------------------------------------------------------------------------------TTAC----ACAAT-----------------------------------TTATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
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Generated: 05/19/2015 at 10:43 AM