ID:

dvi_5684

 Coordinate:

scaffold_12875:8037373-8037533 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-36.0 -35.3 -35.3

Flybase annnotation

exon [dvir_GLEANR_6124:1]; CDS [Dvir\GJ20706-cds]; CDS [Dvir\GJ20706-cds]; exon [dvir_GLEANR_6124:2]; intron [Dvir\GJ20706-in]

No Repeatable elements found

Sense Strand Reads

##################################################-----------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CTGTGATATTTAGACCTAAAGTGCAAGTGCAGCCACAGCAAACTGTCAAGGTATACAAACATATGCGTTGAAAATATATACATACATATGCTGAGTTGCCACAAACAGCTGTTTTGCGGCAATGTGGCAACCCAATGAACATGTGGTTGTTTTAGAAAACACTTGAATTTCTCTTTGATCTTATTTTAATTTGTATTATCATGCATTACAGAAGGTAGCAGGCACTACTATTGCTCTCGGCAAAATACCTGCCGGAGCTAT
**************************************************............((((((.((.((((((.(((..((((((.((.(((((((((....(((((...)))))..))))))))).)).....))))))..)))...(((((.........)))))...................)))))).)))))))).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M061
embryo
 M047
female body
 GSM1528803
follicle cells		 V116
male body		 SRR060681
Argx9_testes_total
 M027
male body		 SRR060669
160x9_females_carcasses_total
 SRR060659
Argentina_testes_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060667
160_females_carcasses_total
 SRR060688
160_ovaries_total
 SRR1106723
embryo_12-14h
 V053
head
 SRR060685
9xArg_0-2h_embryos_total
 SRR060679
140x9_testes_total
 V047
embryo
 SRR060666
160_males_carcasses_total
................................................................................................................................................................................................................CATAAAGTAGCAAGCACTACT................................ 21 3 3 15.00 45 45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................CATAAGGTAGAAAGCACTACT................................ 21 3 2 8.00 16 12 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................CATAAAGTAGCACGCACTACT................................ 21 3 2 3.00 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................CATAAAGTAGAAGGCACTACT................................ 21 3 6 1.67 10 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TTACGGAAGGTAGAAGGCTC.................................... 20 3 3 1.33 4 0 0 0 1 0 3 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................AATGTGGCAACCCAATGAACATGTGGT.................................................................................................................. 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.......ATTTAGACCTAAAGTGCAAGT......................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................CATAAAGTAGCAGGCACTACT................................ 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................TACAGAAGGTAGCAGGCA..................................... 18 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................AAAATACCTGCCGGAGCTA. 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................ATTACGGAAGGTAGAAGGC...................................... 19 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................GCAGGCACTACTAATGCTCTCGGC.................... 24 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TAGCAGGCACTACTATTGCTCTCGGC.................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................GTTTTGCGGCAATGTGGCAACC................................................................................................................................. 22 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................ATTTGTATTATCATGCATTACAGAAGGT............................................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................TCGGCAAAATACCTGCCGGAGCTAT 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................ATTACGGAAGGTAGAAGGCTC.................................... 21 3 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................CAGAAAGTAGAAAGCACTACT................................ 21 3 2 1.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................GCAGGCACTACTATTGCTCTCGGC.................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................AGAAAGTAGAAAGCACTACT................................ 20 3 17 0.59 10 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................CATAAGGTAGAAAGCACTAC................................. 20 3 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................TAGAAAACTCATGATTTTCTCT....................................................................................... 22 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
................................................................................................................................................................................................................CATAAAGTAGCAAGCACTAC................................. 20 3 9 0.22 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................CCACACACCGCTGTTTTGAG............................................................................................................................................... 20 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
................................................................................................................................................................................................................CACAAAGTAGCAAGCACTACT................................ 21 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................CAGCCAAAGCAAACCGTCGAG................................................................................................................................................................................................................... 21 3 11 0.18 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0
.................................................................................................................................................................................................................ATAAGGTAGAAAGCACTACT................................ 20 3 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................GTGCAGCCAGAGGAAACT......................................................................................................................................................................................................................... 18 2 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..............................................................................................................................................................................................................TACGGAAGGTAGAAGGCT..................................... 18 3 20 0.10 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1
.............................................................................................................................................................................................................TTACGGAAGGTAGAAGGCT..................................... 19 3 13 0.08 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................GGCATCCAAACATATGCGTC................................................................................................................................................................................................ 20 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

GACACTATAAATCTGGATTTCACGTTCACGTCGGTGTCGTTTGACAGTTCCATATGTTTGTATACGCAACTTTTATATATGTATGTATACGACTCAACGGTGTTTGTCGACAAAACGCCGTTACACCGTTGGGTTACTTGTACACCAACAAAATCTTTTGTGAACTTAAAGAGAAACTAGAATAAAATTAAACATAATAGTACGTAATGTCTTCCATCGTCCGTGATGATAACGAGAGCCGTTTTATGGACGGCCTCGATA
**************************************************............((((((.((.((((((.(((..((((((.((.(((((((((....(((((...)))))..))))))))).)).....))))))..)))...(((((.........)))))...................)))))).)))))))).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528803
follicle cells		 SRR060665
9_females_carcasses_total
 SRR1106730
embryo_16-30h
 SRR060654
160x9_ovaries_total
 SRR060667
160_females_carcasses_total
 V116
male body		 V053
head
 M047
female body
 SRR060671
9x160_males_carcasses_total
...............GATACCACGTTCACGTCTGTGTCGT............................................................................................................................................................................................................................. 25 3 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................CGTCCGGGATGATAACGAGAG....................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0
..................................TGTCGTTTGACAGTTCCATATG............................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................TTTTGTGAACTTAAAGAGAAC..................................................................................... 21 1 2 0.50 1 0 0 0 1 0 0 0 0 0
...................................................................................................................TGCCGTTACACTGTTGGG................................................................................................................................ 18 2 3 0.33 1 0 0 0 0 1 0 0 0 0
....................................................................................................................................................................CGTAAAGAGAAACTAGTATTAA........................................................................... 22 3 3 0.33 1 0 0 0 0 0 1 0 0 0
......................................................AGTCTGTATACGCAAGTTTTA.......................................................................................................................................................................................... 21 3 8 0.13 1 0 0 0 0 0 0 1 0 0
..................................................................................................................................................................AAGTTAAAGAGAAACTAGAAG.............................................................................. 21 2 13 0.08 1 0 0 0 0 0 0 0 0 1
.....................................................................................................................................................................TTAAGGCGAAACTAGAATAG............................................................................ 20 3 20 0.05 1 0 0 0 0 0 0 0 1 0
..........................CACGGCGGGGTCGTTTGAG........................................................................................................................................................................................................................ 19 3 20 0.05 1 0 0 0 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12875:8037323-8037583 - dvi_5684 CTGTGATATTTAGACCTAAAGTGCAAGTGCAGCCACAGCAAACTGTCAAGGTATAC-AAA--CATATGCGTTGAAAATATATACATACATAT---------GCTGA------GTTGCCA---------------------------------------------------CAAACAGCTGTTTTGCGGCAATGTGGCAACC-------------------------------------------------CAATG--AACATGTGGTTGTTTTA----------------------------------------------------------------GAAAACACTT--GAATTTCTCTTTGATCTTA---TTTTAATTTGTATT--ATCATGCATTACAGAAGGTAGCAGGCACTACTATTGCTCTCGGCAAAATACCTGCCGGAGCTAT
droMoj3 scaffold_6496:19231487-19231744 + CCATGATATTTAGACCTAAAATTGAAGTGCAGCAACAGCAAGCTGTCAAGGTATAGCACA-C-ATATCTA-------------------TAT---------ACTAACTTAATGCTACCA---------------------------------------------------CAAACAGCTGTTTCGAGGCGGTCCGGCAACG-------------------------------------------------CACTGGG-----------------CGTTCTGATTACATTTAAGGAATATTAGAATACAAT--------------------------------------------TTGTGTATTATTTTA---TTGAAACTGAAACTGAACAATGCATTACAGAAGATAGCAGGCGGCAGCATTGCGCTCGGCAAAATACCTGCCGGAGCTAT
droGri2 scaffold_15245:1527119-1527422 - GTGTGGTATTCCGGTCTAAAGGGCCACTGCAGCCACAACAAATGTTAAAGGTATAC-AAA--CATTTGCAGACAGAATACATACATA-AAATG------------------------CA---------------------------------------------------TAAACAGCTGTTTTATGGCGATGTGGCAACCATTTGTGTATAAAAACGCAAATCAGCTGCTCGAAAATAATCTCGTAGTCCATAC--AACATGTGTTTCACTTC----------------------------------------------------------------GAAATCATTGACGAATTATGTTTAAATTATATTTTTTAAATTAA--TTG-AATATGCATAACAGAAGCTAACAGGCACAAGCATTGCGCTCGGCAAGATACCAGCCGGTTCTCC
droBip1 scf7180000396759:2810656-2810713 - TCGTACCATTTCGGCCAAAGACAGAAG---ATTTCCAGCGAATACCAAAGGTAGGC-AAA--CA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302476:2900658-2900713 + GCGTGGTTTTAAAACCAATAACCATTG---ATCCCCAGCAAATAATCAGGGTAAAC-TAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491214:1009053-1009344 + CCATGATTTTCCGCTCGAAAACATCGG---ATCCCCCGCAGATAACAAAGGTAAAT-AAAAT-GTATGCAAAA------------------AATACGAACT----------------------CCTATTTTTTGTTGTCATCCGGCGTTGCCAGATGGGCAAGAGGTGCACAAACAGCTGTTAAATAAC-----------A-------------------------------------------------------------------------TGTGCAGAGCAGAACAGCGAAATGTAA-ATCGCAATTGATAAAGTAATTTAATTTATTTACGCAGAAATCATTCGC------------------------GAAATTTGAACCGGGTAATGCCACAGTGAGGATAACTTCGGGTGGAATAGTACTCAACAAAATACCAGC------TAT
droBia1 scf7180000301754:5545904-5545982 - CCGTGGTTATACGCCCGAAAACACAGG---ATCTTCAGCAAACTTTGAAGGTAATC-AGAATAGTCTGCAAAA------------------TGTATAAACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415345:366133-366212 - CCGTGGTTTTACGCCCGAAAACACAGG---ATCCCCAGCAAATAATAAAGGTAAAATAGAACAGTCTGCAAAA------------------TGTATAAACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409672:1816942-1817249 + ACGTTGTTTTTCGCCCGAAAACACTGG---ATCCGCAGCAAATAACAACGGTAAGC-AAA--AGTCTGCAAAATACAAG------------TATATAAACAA---------------CT---CCCCCTTTTTTGTTTTCATTCGGCGTTGCCAGATCGACTTGAGCTGCGCGAACAGCTGTCTAGTTAC-----------T-------------------------------------------------TATGGGA-----------------AGTGCCGAGCACAACAAATAAATGTAA-ATTTCAATTATTTAAGTAATTACTTTTCTTGGCACAGAAACCGTTTCC------------------------TAAATTAGAACCTGGAAATGCCACAATCAGGGTCACTTCAGGGGGCATAGTTCTCAACAAAATACCAGC------TGT
droSim2 2r:13946468-13946766 - dsi_18690 CAGTGATCTTGAGCCCCGAAATACTAG---ATTCCCAAGATAACACAAAGGTAATC-AAA--AGTCTGTCAAA------------------TGTATAAACTA---------------TATTCTCATCCTTTTTGTTGTAATTCGGCGTTGCCAAATCGTCAAGAGATGCTCGACCAGCTGTTTAGTGAA-----------A-------------------------------------------------TACATGA-----------------TGTGCTGAACACAATTTTGAATTATAA-ATCATAATCAT------ACTTGTACTTATTTGCCCAGAAACCGTTTAC------------------------AAAATTGGACTCGGGAAGTGCATCAGTGAGAGTTAATGCAGGCGGTATAGTTCTTAACAAAATACCAGC------GAT
droSec2 scaffold_1:10795557-10795583 - T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAGTTCTTAACAAAATACCAGC------GAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
CTGTGATATTTAGACCTAAAGTGCAAGTGCAGCCACAGCAAACTGTCAAGGTATAC-AAA--CATATGCGTTGAAAATATATACATACATAT---------GCTGA------GTTGCCA---------------------------------------------------CAAACAGCTGTTTTGCGGCAATGTGGCAACC-------------------------------------------------CAATG--AACATGTGGTTGTTTTA----------------------------------------------------------------GAAAACACTT--GAATTTCTCTTTGATCTTA---TTTTAATTTGTATT--ATCATGCATTACAGAAGGTAGCAGGCACTACTATTGCTCTCGGCAAAATACCTGCCGGAGCTATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................................................................................................AATGTGGCAACC-------------------------------------------------CAATG--AACATGTGGT.........................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000100000000000
.......ATTTAGACCTAAAGTGCAAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................TACAGAAGGTAGCAGGCA.....................................1811.001000000000000000000010000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATACCTGCCGGAGCTA.1911.001000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................TAGCAGGCACTACTATTGCTCTCGGC....................2611.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................GTTTTGCGGCAATGTGGCAACC-------------------------------------------------..........................................................................................................................................................................................................2211.001000000000100000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................ATTTGTATT--ATCATGCATTACAGAAGGT.............................................2811.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGCAAAATACCTGCCGGAGCTAT2511.001000000000000000000000000000000000000001000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................GCAGGCACTACTATTGCTCTCGGC....................2411.001000000000000000000000000000000000000000000000000000000000000001
droMoj3
CCATGATATTTAGACCTAAAATTGAAGTGCAGCAACAGCAAGCTGTCAAGGTATAGCACA-C-ATATCTA-------------------TAT---------ACTAACTTAATGCTACCA---------------------------------------------------CAAACAGCTGTTTCGAGGCGGTCCGGCAACG-------------------------------------------------CACTGGG-----------------CGTTCTGATTACATTTAAGGAATATTAGAATACAAT--------------------------------------------TTGTGTATTATTTTA---TTGAAACTGAAACTGAACAATGCATTACAGAAGATAGCAGGCGGCAGCATTGCGCTCGGCAAAATACCTGCCGGAGCTATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................................................................................................................................................................................................................................................................................................................................................................................................................GCGGCAGCATTGCGCTCGGC....................2011.001000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATACCTGCCGGAGCTAT1911.001100000
...............................................................................................................................................................................................................................................................................................TTTAAGGAATATTAGAATACA................................................................................................................................................2111.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................GCATTACAGAAGATAGCAGGCGGCA..................................2511.001000010
...............CTAAAATTGAAGTGCAGCAAC................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
droGri2
GTGTGGTATTCCGGTCTAAAGGGCCACTGCAGCCACAACAAATGTTAAAGGTATAC-AAA--CATTTGCAGACAGAATACATACATA-AAATG------------------------CA---------------------------------------------------TAAACAGCTGTTTTATGGCGATGTGGCAACCATTTGTGTATAAAAACGCAAATCAGCTGCTCGAAAATAATCTCGTAGTCCATAC--AACATGTGTTTCACTTC----------------------------------------------------------------GAAATCATTGACGAATTATGTTTAAATTATATTTTTTAAATTAA--TTG-AATATGCATAACAGAAGCTAACAGGCACAAGCATTGCGCTCGGCAAGATACCAGCCGGTTCTCCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droBip1
TCGTACCATTTCGGCCAAAGACAGAAG---ATTTCCAGCGAATACCAAAGGTAGGC-AAA--CA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
GCGTGGTTTTAAAACCAATAACCATTG---ATCCCCAGCAAATAATCAGGGTAAAC-TAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
CCATGATTTTCCGCTCGAAAACATCGG---ATCCCCCGCAGATAACAAAGGTAAAT-AAAAT-GTATGCAAAA------------------AATACGAACT----------------------CCTATTTTTTGTTGTCATCCGGCGTTGCCAGATGGGCAAGAGGTGCACAAACAGCTGTTAAATAAC-----------A-------------------------------------------------------------------------TGTGCAGAGCAGAACAGCGAAATGTAA-ATCGCAATTGATAAAGTAATTTAATTTATTTACGCAGAAATCATTCGC------------------------GAAATTTGAACCGGGTAATGCCACAGTGAGGATAACTTCGGGTGGAATAGTACTCAACAAAATACCAGC------TATSizeHit CountTotal NormTotal
No Reads
droBia1
CCGTGGTTATACGCCCGAAAACACAGG---ATCTTCAGCAAACTTTGAAGGTAATC-AGAATAGTCTGCAAAA------------------TGTATAAACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
CCGTGGTTTTACGCCCGAAAACACAGG---ATCCCCAGCAAATAATAAAGGTAAAATAGAACAGTCTGCAAAA------------------TGTATAAACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
ACGTTGTTTTTCGCCCGAAAACACTGG---ATCCGCAGCAAATAACAACGGTAAGC-AAA--AGTCTGCAAAATACAAG------------TATATAAACAA---------------CT---CCCCCTTTTTTGTTTTCATTCGGCGTTGCCAGATCGACTTGAGCTGCGCGAACAGCTGTCTAGTTAC-----------T-------------------------------------------------TATGGGA-----------------AGTGCCGAGCACAACAAATAAATGTAA-ATTTCAATTATTTAAGTAATTACTTTTCTTGGCACAGAAACCGTTTCC------------------------TAAATTAGAACCTGGAAATGCCACAATCAGGGTCACTTCAGGGGGCATAGTTCTCAACAAAATACCAGC------TGTSizeHit CountTotal NormTotal
No Reads
droSim2
CAGTGATCTTGAGCCCCGAAATACTAG---ATTCCCAAGATAACACAAAGGTAATC-AAA--AGTCTGTCAAA------------------TGTATAAACTA---------------TATTCTCATCCTTTTTGTTGTAATTCGGCGTTGCCAAATCGTCAAGAGATGCTCGACCAGCTGTTTAGTGAA-----------A-------------------------------------------------TACATGA-----------------TGTGCTGAACACAATTTTGAATTATAA-ATCATAATCAT------ACTTGTACTTATTTGCCCAGAAACCGTTTAC------------------------AAAATTGGACTCGGGAAGTGCATCAGTGAGAGTTAATGCAGGCGGTATAGTTCTTAACAAAATACCAGC------GATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................GCCAAATCGTCAAGAGATG............................................................................................................................................................................................................................................................................................1911.00101000000000000000
...................................................................................................................................................................................................................................................................................GTGCTGAACACAATTTTGAATT...........................................................................................................................................................2211.00100010000000000000
...........................................................................................................................................................................................................................................................................................................................................................TAC------------------------AAAATTGGACTCGGGAAGTGCATC......................................................2711.00100000000000100000
.....................................................................................................................................................GCCAAATCGTCAAGAGAT.............................................................................................................................................................................................................................................................................................1811.00110000000000000000
.......................................................................................................................................................................................................................................................................................................................................................CGTTTAC------------------------AAAATTGGACTCGGG...............................................................2211.00100001000000000000
droSec2
T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAGTTCTTAACAAAATACCAGC------GATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads

Generated: 05/16/2015 at 08:28 PM