ID:

dvi_5459

 Coordinate:

scaffold_12875:6218995-6219145 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-24.6 -24.3 -24.3

Flybase annnotation

CDS [Dvir\GJ21530-cds]; exon [dvir_GLEANR_6880:1]; intron [Dvir\GJ21530-in]; Antisense to intron [Dvir\GJ20803-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CACTGCGCTGCAGCTGAACTCTGCGGTGGGCATTATGGGCAAGGTTTATGGTAAGTGCAAGCCGAACTACTGCCACACAGTAGGAAATAATTTATTTTCGTATCAATTTGTACGTGTAATATCTTGATGCACTTTGTCAATATTGTTTTTATTTTTATTTTTACATTTTTCGACAACGCACTTTTGTTTCGTGAAAATCTTTACCATATGCGTCGCAATGCGCATGTTTCATAATCGATAAACTGGCGCGC
**************************************************..((((((........((((((.....))))))((((........))))(((((((..(((.......)))..)))))))...(((((((...(((................)))...)).))))).))))))..................************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060667
160_females_carcasses_total
 V053
head
 SRR060672
9x160_females_carcasses_total
 M027
male body		 M047
female body
 SRR060665
9_females_carcasses_total
 SRR060679
140x9_testes_total
 V047
embryo
 SRR060666
160_males_carcasses_total
 SRR060668
160x9_males_carcasses_total
 SRR060686
Argx9_0-2h_embryos_total
..........................TGGGCATTATGGGCAAGGTTT............................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..CTGCGCTGCAGCTGAACTCTGCGGTGGGC............................................................................................................................................................................................................................ 29 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
......................................................................TGCCACACAGTAGGAAATCATTT.............................................................................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................AATATCTTGATGCACTTTGTCAAT.............................................................................................................. 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................ACGTGTAATATCTTGATG.......................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
CACTGCGCTGCAGCTGAACTC...................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
................................TTATGGGCAAGGTTTATGGTA...................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................GTAATATCTTGATGTACTTTTT.................................................................................................................. 22 2 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
............................................................................................................................................................................................................CATATGCGTCGCAATGCGCATG......................... 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
.........................................................CAAGCCTAACTACTGCGA................................................................................................................................................................................ 18 2 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
..............TGAACACTGCGGTGGGCTCT......................................................................................................................................................................................................................... 20 3 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................TAATCGATCAACTAGCACGC 20 3 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0
..........................................................AAGACTAACTACTGCGACA.............................................................................................................................................................................. 19 3 20 0.10 2 0 0 0 0 0 0 0 0 0 1 1
..................................................................................................................................................................................................................CGTGTCAATGCGCATGTCTC..................... 20 3 11 0.09 1 0 1 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

GTGACGCGACGTCGACTTGAGACGCCACCCGTAATACCCGTTCCAAATACCATTCACGTTCGGCTTGATGACGGTGTGTCATCCTTTATTAAATAAAAGCATAGTTAAACATGCACATTATAGAACTACGTGAAACAGTTATAACAAAAATAAAAATAAAAATGTAAAAAGCTGTTGCGTGAAAACAAAGCACTTTTAGAAATGGTATACGCAGCGTTACGCGTACAAAGTATTAGCTATTTGACCGCGCG
**************************************************..((((((........((((((.....))))))((((........))))(((((((..(((.......)))..)))))))...(((((((...(((................)))...)).))))).))))))..................************************************************** 		Read size # Mismatch Hit Count Total Norm Total V116
male body		 SRR060668
160x9_males_carcasses_total
 M047
female body
 SRR060678
9x140_testes_total
 V053
head
 SRR060685
9xArg_0-2h_embryos_total
 SRR060666
160_males_carcasses_total
 V047
embryo
.....................................................................................................................................................................................................................................GTATTAGCTAGTTGATCGTGC. 21 3 1 2.00 2 2 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................CGCGTACAAAGTATTAGCTAT........... 21 0 1 1.00 1 0 0 0 1 0 0 0 0
..............................................................................................................................................................................................CACTTTTAGAAATGGTATACGCAG..................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0
........................................................CGATAGGCTTGATGACGGTGT.............................................................................................................................................................................. 21 2 1 1.00 1 0 0 0 0 1 0 0 0
.......................................................................................................GTTGGGCATGCACATTATAGAACT............................................................................................................................ 24 3 1 1.00 1 0 0 1 0 0 0 0 0
.........................................................................................................................................................................................TCAAGCACTTTTAGAAATG............................................... 19 2 5 0.20 1 0 0 0 0 0 1 0 0
......................................................................................................................................................................ACAAGCAGTTGCATGAAAAC................................................................. 20 3 12 0.08 1 0 1 0 0 0 0 0 0
.............................................................................................................................................................AGGAATGTAAAAAGCTGTCG.......................................................................... 20 3 19 0.05 1 0 0 0 0 0 0 1 0
.......................................................................................................................................CAGTTATAACAAAAATTAACAA.............................................................................................. 22 3 20 0.05 1 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12875:6218945-6219195 + dvi_5459 CACTGCGCTGCAGCTGAACTCTGCGGTGGGCATTATGGGCAAGGTTTATGGTAAGTGCAAG-CCGAACTAC-----TGCCACACAG---------------TAGGA--------------------------------AA-TAATTTAT------TTTCG---------------TATCAATTTGTA-CGT------G-----------T-AATATCTTGATGCACTTT-GTCAATAT-------------TGTTTTTAT------TTTT--------------------------------ATTT-TT----------------ACATT--TTTCGACAACGCACTTT------TGTTTCGTGAAAATCTT--TA-CCATA----TGC-------------------GTCG-CAATGCGCATGTTTCATAATCGATAA--AC--T----GGCGCGC
droMoj3 scaffold_6496:23812971-23813234 - CACCTCATTGCAACTGAACACAGCGGTGGGCATTATTGGCAAGGTTTATGGTAAGTGGCAGAAC--GGTCA-----G-GTGCGCCACA----TG-------TTGGT--------------------------------CA-CA-TTTATATTTTGTTTCG---------------T-TCAA-TTTCA-TGT------G-----------T-CCTAATTTGGTGCACTTT-GTCTA----CTT--TAT----------TAG------TTAA------------------------ATATTTTTCTTTATT----------------ACAAT--TGTCAAGAACGCACTTT------TGTTTCGTGAAAATCTT--TTACCATA----TGC-------------------GATG-CAATGCGCATGTTTCATAATCGATAA--AT--TGT---GGGTGC
droGri2 scaffold_15112:1108084-1108346 + CACAGCACTGCAACTGAACACAGCCGTGGGCATTATTGGCAAGGTTTATGGTAAGTTTCAGCTCTTACTTA-----TTTTCCT-------------------------------TTTTATC------------------------------------------------------AATTGCCAA-TTTGGT------T-----------GTAATACTTTTCTGCACTTT-ACAAATTA-T----------TTGTTTTCAT------TTTT---T-CGTAT--------------------TTCTTT--------TGTATTTG-TCATAT--TTCTCGAGAACGCAC-TT------GGTTTCGTGAAAATCTTTTTTACCATA----TGC-------------------GTCG-CATTGCGCATGTTTCATAATCGATAA--ATATTGTATGGGGCGC
droWil2 scf2_1100000004822:1336076-1336361 - C-------TCCAGCTGAGCTCTACCGTGGGCATAATTGGCAAAGTGTATGGTAAGTAAAAT-GAGTGTACATATATCTTCATTC---ATT----------------CATAACT-TTTTAAAAA------TC------AAAC----------------------------------GTCACCTACATATCAT------GCACTTTATTC-CAAATGGTTTTTCATGATTT-TCTGGTTTTC-----G--------------------TTGG---T-CTTGTGTTCCTT-----------T--------ATTCTTTTGTATTTTATTGCA-------TTTTTACCTACTTTT----ATGTCTCGAGAAAAATCTTCTT--TATTT-GG---CCAAA-A----A-------GCTG-AACTGCGCATGCTTTGTAATCGATAATGAA-----------ATC
dp5 3:8155361-8155598 - C-------TCCAGATCAACACCACCGTGGGCATCATTGGAAAGGTCTACGGTAAGTTTT----------CATTCG-CCTCATCCC-CA-----------------------CC-CT-C-ACCCTCACCCTTGGTAGTAAAGT---------------------------------AATCGATTCT---CGT------G-----------T-AATAGTTCACTGCAATTT--TTGGTTTAC-----TT----------TTG------ATTC-------------------------------------------------------------------CTCATGCACTTT------TGTTTCGAGAAAATTTT--TC--CATTT-ACTGACCAAA-ATG-AGACCACACCACG-AACTGCGCATGTTTCATAATCGATAA--AT--------------
droPer2 scaffold_4:2032867-2033098 - C-------TCCAGATCAACACCACCGTGGGCATCATTGGAAAGGTCTACGGTAAGTTTT----------CATTCG-CCTCATCCT-C--------------------------------ACCCTCAACCTTGGTAGTAAAGT---------------------------------AATCGGTTTG---CGT------G-----------T-AATAGTTCACTGCACTTT--TTGGTTTAC-----TT----------TTG------TTTC-------------------------------------------------------------------CTCATGCACTTT------TGTTTCGAGAAAATTTT--TC--CATTT-ACTGACCGAA-ATG-AGACCACACCACG-AACTGCGCATGTTTCATAATCGATAA--AT--------------
droAna3 scaffold_13266:17152339-17152590 - C------CTGCAGATCACCTCCGCGGTGGGCATCATTGGAAAGGTCTACGGTGAGTTCA-C-ACACATCCA-----T-TCACACCTCA---------------TCC-----------A-------AATCTC------A-------------------------------------AATAGCTTCTCA-TGA------G-----------ACAATATTTCACTGCACCTT-TTCGGTTT-G----------TTGTTTTTAG------TTTT---T-CGTACATATTACCTTTCCTCCAATTTGCT---------T--------------------ACGCTTACGCACTTTTGGTTCAGTTTCGAGAAAATTTT--CC--CATCG-CGT------------------------C-AACTGCGCATGTCCCTGAATCGATAA--AA--------------
droBip1 scf7180000396735:411064-411305 - C-------TGCAGATCACCTCCGCAGTGGGCATCATTGGCAAGGTCTACGGTGAGTTTA----CACATCCA-----T-TCACACTTCA---------------TC------------------------TC------A-------------------------------------GATAGATCCTCA-TGA------G-----------ACAATACTTCACTGCACCTT-TTCGGTTT-G----------TTGTTTTTCG------TTTT---T-CGTACAT--TACCTTCCCTCCGATTTGCTTT-T--------------------------ACGCTTACGCACTTTTGGTTCAGTTTCGAGAAAATTTT--CC--CATCG-AGT------------------------G-AACTGCGCATGTCCCTGAATCGATAA--A---------------
droKik1 scf7180000302817:292696-292986 - C-------TCCAGATGACGTCCGCCGTGGGCATTATCGGCAAGGTGTACGGTAAGTGTGTTTTAGCCTTTA-----T-TCACGCT-CA---------------TTCCGTCATCCTGCCATCCC------GA------AAAG----------------------------------GGACATTCTTTGTGTC------A----------TACATCACATCCATGCACCTT-TTCGATTTTT--CACCTCAGTTGTCTTTTGTTTTCGTTTTTGTT-CGCCT-T--TCCTTTTCCTCCG---------------TTT--------------------CTCTTACGCACTTT-----TGGTTCCGAGAAAATTTT--CC--AATTCTAAGGGGG--AGG-C-GG-------TGGG-CAGTGCGCATGCCCCGCTATCGATATCGGG------------CC
droFic1 scf7180000454066:1768099-1768341 + C-------TCCAGATGACCTCCGCCGTGGGTATAATCGGAAAGGTTTACGGTGAGTTTCC----------CCTAG-T-TTATC-----------------------ATTCACTTTTTCAACGC--------------AT---------------------ACAACTCATTGAAAGGCCCGGTTTT---AGT------G-----------TGAATACTTCACTGCACCTTTTTCGGTTA-T-----CT----------CAG------TTTT---T-CGTG--TCCTAT-----------TTTTCTTT--------TG-----------CTTTT-----------CACTTT------GGTTCTGTGAAAATTTT--CC--CATTC-GGTGCAG--A-----------------A-GACTGCGCATGTCCCGCTATCGATAA--A---------------
droEle1 scf7180000491271:185379-185622 - C-------TCCAGATGACCTCCGCCGTGGGCATCATCGGAAAGGTCTACGGTGAGTGTGGT-CCCCGCCCA-----TCTTGCA-TCCA--------CGCGAA-------CGC---GAAA----ACAACCTC------AAAG----------------------------------GATCGGTTTA---AGT------G-----------TGGACACTTTACAGCACCTC-TTTG-TTTTC-----CT----------GAG------TTTT---T-CTTGCGT----------------TTTTCT---TTCCGTTT--------------------GGCTTACGCACTTT------GGTTCCGAGAAAATTTT--CC--CAATA-AGTGG----------------------A-CAATGCGCAGGTCTCGCTATCGATAG--G---------------
droRho1 scf7180000779260:15934-16178 - C-------TCCAGATGACCTCCGCCGTGGGCATTATCGGGAAGGTCTATGGTAAGTGTGAC-CCCCG---------CTTCATCTATCA----TCCTTGCCAA-------CTC---GAAA----ACAACCTC------AAAT----------------------------------TATTGGTTTT---CGT------G-----------TGAATACTTCACTGCACCTC-TTGGGTTT-------TT----------GAG------TTTT---T-CTTGCGT-------------------TCTTTTTTTCGTTT--------------------GGCTTACGCACTTT------GGTTCCGTGAAAATTTT--CT--TATTC-AGTAG----------------------A-CAGTGCGCAGGTCCCGCTATCGATAT--GT--------------
droBia1 scf7180000302291:285986-286237 + C------CTGCAGATGACCTCCGCCGTGGGCATCATCGGGAAAGTGTACGGTGAGTGCGAC-A--CATCCA-----CTTCATACTT---TCAGGCTGCCCA---------GG---GAAA----ACGGCCTC------AA------------------------------------GAGCGGCTC---TGGTGAAAAAG-----------TGAACACTTCACTGCACCTC-TTTGGTTT-C-----TT----------CAG------TTTT---T-CTCG--T------------ACGACCTCCTTT-T-------G-----------CGTTT---C-CT----TACTTT------CGTTCGGTCAAAATTTT--CC--AATC--ATTGGGG--------------------GCAACTGCGCATGTCCCGCTATCGATAG--GT--------------
droTak1 scf7180000415401:785267-785521 + C-------TCCAGATGACCTCCGCCGTGGGCATCATTGGGAAGGTGTACGGTGAGTGACATTGCCCATCCATCCA-CTTCATCC----------------------CATCATCCAT-C-ATCCCCAATCTCCATGGTA-------------------------------------AATCGGTTT-TATGGT------G-----------TGAATACTTCACTGCACCTT-TTTGCTTT-C-----CT----------GAG------TTCT---T-CGCG--T------------ATGATTTCCTTT-TC-----TG-----------ATTTT---C-CT----CACTTT------GGTTCCGTGAAAATTTT--CC--AACTC-ACTGGGG-------------------GA-GACTGCGCATGTC-CGCTATCGATAG--G---------------
droEug1 scf7180000409462:3003931-3004176 + C-------TCCAGATGACCTCCGCCGTGGGCATCATTGGGAAAGTCTACGGTGAGTGTGTT-AC------AACAA-CCTCATCCAT---T----------------CATTAAC-ATCTCGCAA------TC------AAAG------------------------------GATGGATCGGTTT-TATGGT------G-----------TGAATACTTCACTGCACCTC-TTTGGTTT-C-----CT-------TTTGGG------TTTT-----C----------T-----------CTTTCTTT--------TG-----------ATTTT--TCG-T----CACTTT------GGTTCCGTGAAAATTTT--CC--AATTC-TGTGGGG----GTG-G-----------GCATCTGCGCATGTCCCGCTATCGATAG--A---------------
dm3 chr2R:9841972-9842234 - C-------TCCAGATGACCTCCACCGTGGGCATCATTGGGAAAGTCTACGGTGAGTGTGGC-ACGCATTTA-----TTTCATTCCCCA-------------A-CCCCATCACCTTTTTAGCCC------TC------GAAG----------------------------------GATCGGTTTTTCTGGT------G-----------TGAATACTTCACTGCACCCTTTTTGGTTTTT-----CT----------CAG------TTTC---TTCTTAG-T------------ATGATTTTCTTT-T-----------------------T---C-CT-------TT------CGGTTTCGTGAAAATTCTATCC--AATTTGAGTGGTG--AAT-AGGG-------GGTG-TAGTGCGCATGTCCCGCTATCGATATCGGT----------G---
droSim2 2r:10529456-10529716 - dsi_6397 C-------TCCAGATGACCTCCACCGTGGGCATCATTGGGAAAGTCTACGGTGAGTGTGGC-ACGCATTCA-----TTTCACCCTTCA---------------CCCCATCACCTTTTTAGCCC------TC------GAAG----------------------------------GATCGGTTTTTCTGGT------G-----------TGAATACTTCACTGCACCCTTTTTGGTTTTC-----CT----------CAG------TTTC---TACTTCG-T------------ATGGTTTTCTTT-T-----------------------T---C-CT-------TT------CGGTTTCGTGAAAATTCTATCC--AATTCGAGTGGTG--AAT-AGGG-------GATG-TTGTGCGCATGCCCCGCTATCGGTATCGGT--------------
droSec2 scaffold_239:12315-12575 - C-------TCCAGATGACCTCCACCGTGGGCATCATTGGGAAAGTCTACGGTGAGTGTGGC-ACGCATTCA-----TTTCACCCTTCA---------------TCCCATCACCTTTTTAGCCC------TC------GAAG----------------------------------GATCGGTTTTTCTGAT------G-----------TGAATACTTCACTGCACCCTTTTTGGTTTTC-----CT----------CAG------TTTC---TTCTTCG-T------------ATGATTTTCTTT-T-----------------------T---C-CT-------TT------CGGTTTCGTGAAAATTCTATCC--AATTCGAGTGGTG--AAT-ATGG-------GGTG-TTGTGCGCATGCCCCGCTATCGGTATCGGT--------------
droYak3 2R:7111829-7112079 + C-------TCCAGATGACCTCCGCCGTGGGCATCATTGGGAAAGTCTACGGTGAGTGTGGC-ACACAATCA-----TTTCGCCC----------------------CATCACCTTTTTAGCCC------CC------GAAG----------------------------------GATCGGTTTTTATGGT------G-----------TGAATACTTCGCTGCACCCT-TTTGGTTTTC-----CT----------GAG------TTCC---T-CTTGC-T------------ATGATTTTCTTTTT-----------------------T---C-CT-------TT------CGGTTTCGTGAAAATTCTATCC--AATGG-AGTGGGG--AAT-G-GG-------GGTG-TACTGCGCATGTCCCGCTATCGGTATCGGT--------------
droEre2 scaffold_4845:15979910-15980162 + C-------TCCAGATGACCTCCGCCGTGGGCATCATTGGGAAAGTCTACGGTGAGTGTGGC-ACCCAATCA-----TTTCGCCC----------------------AATCACCTTTTAAGCCC------TC------AAAG----------------------------------GATCGGTTTTTATGGT------G-----------TGAATACTTCGCTGCACCCTTTTTGGTTTTC-----CT----------GAG------TTCC---T-CTTGC-T------------ATGATTTTCTTTTT-----------------------T---C-CT-------TT------CGATTTCGTGAAAATTCTATCC--AACTG-AGTGGGG--AGT-G-GG-------GCGG-TACTGCGCATGTCCCGCTATCGGTATCGGT----------G---

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
CACTGCGCTGCAGCTGAACTCTGCGGTGGGCATTATGGGCAAGGTTTATGGTAAGTGCAAG-CCGAACTAC-----TGCCACACAG---------------TAGGA--------------------------------AA-TAATTTAT------TTTCG---------------TATCAATTTGTA-CGT------G-----------T-AATATCTTGATGCACTTT-GTCAATAT-------------TGTTTTTAT------TTTT--------------------------------ATTT-TT----------------ACATT--TTTCGACAACGCACTTT------TGTTTCGTGAAAATCTT--TA-CCATA----TGC-------------------GTCG-CAATGCGCATGTTTCATAATCGATAA--AC--T----GGCGCGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................TGGGCATTATGGGCAAGGTTT..........................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
..CTGCGCTGCAGCTGAACTCTGCGGTGGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001100000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................AATATCTTGATGCACTTT-GTCAAT.............................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................A-CGT------G-----------T-AATATCTTGATG..........................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000100
CACTGCGCTGCAGCTGAACTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000100000000000000000000000000000000000000000000000
................................TTATGGGCAAGGTTTATGGTA....................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000010000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................CATA----TGC-------------------GTCG-CAATGCGCATG.................................2211.001000000000000000000000000000001000000000000000000000000000000000
droMoj3
CACCTCATTGCAACTGAACACAGCGGTGGGCATTATTGGCAAGGTTTATGGTAAGTGGCAGAAC--GGTCA-----G-GTGCGCCACA----TG-------TTGGT--------------------------------CA-CA-TTTATATTTTGTTTCG---------------T-TCAA-TTTCA-TGT------G-----------T-CCTAATTTGGTGCACTTT-GTCTA----CTT--TAT----------TAG------TTAA------------------------ATATTTTTCTTTATT----------------ACAAT--TGTCAAGAACGCACTTT------TGTTTCGTGAAAATCTT--TTACCATA----TGC-------------------GATG-CAATGCGCATGTTTCATAATCGATAA--AT--TGT---GGGTGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............CTGAACACAGCGGTGGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000010
...............GAACACAGCGGTGGGCATTATTGGCA................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
............................................................................................................................................................................................................................................................................................................................................TGTCAAGAACGCACTTT------TGT...................................................................................................2011.001000001
droGri2
CACAGCACTGCAACTGAACACAGCCGTGGGCATTATTGGCAAGGTTTATGGTAAGTTTCAGCTCTTACTTA-----TTTTCCT-------------------------------TTTTATC------------------------------------------------------AATTGCCAA-TTTGGT------T-----------GTAATACTTTTCTGCACTTT-ACAAATTA-T----------TTGTTTTCAT------TTTT---T-CGTAT--------------------TTCTTT--------TGTATTTG-TCATAT--TTCTCGAGAACGCAC-TT------GGTTTCGTGAAAATCTTTTTTACCATA----TGC-------------------GTCG-CATTGCGCATGTTTCATAATCGATAA--ATATTGTATGGGGCGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
C-------TCCAGCTGAGCTCTACCGTGGGCATAATTGGCAAAGTGTATGGTAAGTAAAAT-GAGTGTACATATATCTTCATTC---ATT----------------CATAACT-TTTTAAAAA------TC------AAAC----------------------------------GTCACCTACATATCAT------GCACTTTATTC-CAAATGGTTTTTCATGATTT-TCTGGTTTTC-----G--------------------TTGG---T-CTTGTGTTCCTT-----------T--------ATTCTTTTGTATTTTATTGCA-------TTTTTACCTACTTTT----ATGTCTCGAGAAAAATCTTCTT--TATTT-GG---CCAAA-A----A-------GCTG-AACTGCGCATGCTTTGTAATCGATAATGAA-----------ATCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............GCTGAGCTCTACCGTGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100
.................................................................................................................................................................................................................................ATTT-TCTGGTTTTC-----G--------------------TTGG---T-C.....................................................................................................................................................................................2111.00100001
...........AGCTGAGCTCTACCGTGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
dp5
C-------TCCAGATCAACACCACCGTGGGCATCATTGGAAAGGTCTACGGTAAGTTTT----------CATTCG-CCTCATCCC-CA-----------------------CC-CT-C-ACCCTCACCCTTGGTAGTAAAGT---------------------------------AATCGATTCT---CGT------G-----------T-AATAGTTCACTGCAATTT--TTGGTTTAC-----TT----------TTG------ATTC-------------------------------------------------------------------CTCATGCACTTT------TGTTTCGAGAAAATTTT--TC--CATTT-ACTGACCAAA-ATG-AGACCACACCACG-AACTGCGCATGTTTCATAATCGATAA--AT--------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................ATCATTGGAAAGGTCTACGA......................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
droPer2
C-------TCCAGATCAACACCACCGTGGGCATCATTGGAAAGGTCTACGGTAAGTTTT----------CATTCG-CCTCATCCT-C--------------------------------ACCCTCAACCTTGGTAGTAAAGT---------------------------------AATCGGTTTG---CGT------G-----------T-AATAGTTCACTGCACTTT--TTGGTTTAC-----TT----------TTG------TTTC-------------------------------------------------------------------CTCATGCACTTT------TGTTTCGAGAAAATTTT--TC--CATTT-ACTGACCGAA-ATG-AGACCACACCACG-AACTGCGCATGTTTCATAATCGATAA--AT--------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................................................................................................................................................................................................................................................................................................................................................................................ACACCACG-AACTGCGCATGTT...............................2111.001010000
droAna3
C------CTGCAGATCACCTCCGCGGTGGGCATCATTGGAAAGGTCTACGGTGAGTTCA-C-ACACATCCA-----T-TCACACCTCA---------------TCC-----------A-------AATCTC------A-------------------------------------AATAGCTTCTCA-TGA------G-----------ACAATATTTCACTGCACCTT-TTCGGTTT-G----------TTGTTTTTAG------TTTT---T-CGTACATATTACCTTTCCTCCAATTTGCT---------T--------------------ACGCTTACGCACTTTTGGTTCAGTTTCGAGAAAATTTT--CC--CATCG-CGT------------------------C-AACTGCGCATGTCCCTGAATCGATAA--AA--------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........................................GTCTACGGTGAGTTCA-C-A..........................................................................................................................................................................................................................................................................................................................................................................................................1811.001000001
droBip1
C-------TGCAGATCACCTCCGCAGTGGGCATCATTGGCAAGGTCTACGGTGAGTTTA----CACATCCA-----T-TCACACTTCA---------------TC------------------------TC------A-------------------------------------GATAGATCCTCA-TGA------G-----------ACAATACTTCACTGCACCTT-TTCGGTTT-G----------TTGTTTTTCG------TTTT---T-CGTACAT--TACCTTCCCTCCGATTTGCTTT-T--------------------------ACGCTTACGCACTTTTGGTTCAGTTTCGAGAAAATTTT--CC--CATCG-AGT------------------------G-AACTGCGCATGTCCCTGAATCGATAA--A---------------SizeHit CountTotal NormTotal
No Reads
droKik1
C-------TCCAGATGACGTCCGCCGTGGGCATTATCGGCAAGGTGTACGGTAAGTGTGTTTTAGCCTTTA-----T-TCACGCT-CA---------------TTCCGTCATCCTGCCATCCC------GA------AAAG----------------------------------GGACATTCTTTGTGTC------A----------TACATCACATCCATGCACCTT-TTCGATTTTT--CACCTCAGTTGTCTTTTGTTTTCGTTTTTGTT-CGCCT-T--TCCTTTTCCTCCG---------------TTT--------------------CTCTTACGCACTTT-----TGGTTCCGAGAAAATTTT--CC--AATTCTAAGGGGG--AGG-C-GG-------TGGG-CAGTGCGCATGCCCCGCTATCGATATCGGG------------CCSizeHit CountTotal NormTotal
No Reads
droFic1
C-------TCCAGATGACCTCCGCCGTGGGTATAATCGGAAAGGTTTACGGTGAGTTTCC----------CCTAG-T-TTATC-----------------------ATTCACTTTTTCAACGC--------------AT---------------------ACAACTCATTGAAAGGCCCGGTTTT---AGT------G-----------TGAATACTTCACTGCACCTTTTTCGGTTA-T-----CT----------CAG------TTTT---T-CGTG--TCCTAT-----------TTTTCTTT--------TG-----------CTTTT-----------CACTTT------GGTTCTGTGAAAATTTT--CC--CATTC-GGTGCAG--A-----------------A-GACTGCGCATGTCCCGCTATCGATAA--A---------------SizeHit CountTotal NormTotal
No Reads
droEle1
C-------TCCAGATGACCTCCGCCGTGGGCATCATCGGAAAGGTCTACGGTGAGTGTGGT-CCCCGCCCA-----TCTTGCA-TCCA--------CGCGAA-------CGC---GAAA----ACAACCTC------AAAG----------------------------------GATCGGTTTA---AGT------G-----------TGGACACTTTACAGCACCTC-TTTG-TTTTC-----CT----------GAG------TTTT---T-CTTGCGT----------------TTTTCT---TTCCGTTT--------------------GGCTTACGCACTTT------GGTTCCGAGAAAATTTT--CC--CAATA-AGTGG----------------------A-CAATGCGCAGGTCTCGCTATCGATAG--G---------------SizeHit CountTotal NormTotal
No Reads
droRho1
C-------TCCAGATGACCTCCGCCGTGGGCATTATCGGGAAGGTCTATGGTAAGTGTGAC-CCCCG---------CTTCATCTATCA----TCCTTGCCAA-------CTC---GAAA----ACAACCTC------AAAT----------------------------------TATTGGTTTT---CGT------G-----------TGAATACTTCACTGCACCTC-TTGGGTTT-------TT----------GAG------TTTT---T-CTTGCGT-------------------TCTTTTTTTCGTTT--------------------GGCTTACGCACTTT------GGTTCCGTGAAAATTTT--CT--TATTC-AGTAG----------------------A-CAGTGCGCAGGTCCCGCTATCGATAT--GT--------------SizeHit CountTotal NormTotal
No Reads
droBia1
C------CTGCAGATGACCTCCGCCGTGGGCATCATCGGGAAAGTGTACGGTGAGTGCGAC-A--CATCCA-----CTTCATACTT---TCAGGCTGCCCA---------GG---GAAA----ACGGCCTC------AA------------------------------------GAGCGGCTC---TGGTGAAAAAG-----------TGAACACTTCACTGCACCTC-TTTGGTTT-C-----TT----------CAG------TTTT---T-CTCG--T------------ACGACCTCCTTT-T-------G-----------CGTTT---C-CT----TACTTT------CGTTCGGTCAAAATTTT--CC--AATC--ATTGGGG--------------------GCAACTGCGCATGTCCCGCTATCGATAG--GT--------------SizeHit CountTotal NormTotal
No Reads
droTak1
C-------TCCAGATGACCTCCGCCGTGGGCATCATTGGGAAGGTGTACGGTGAGTGACATTGCCCATCCATCCA-CTTCATCC----------------------CATCATCCAT-C-ATCCCCAATCTCCATGGTA-------------------------------------AATCGGTTT-TATGGT------G-----------TGAATACTTCACTGCACCTT-TTTGCTTT-C-----CT----------GAG------TTCT---T-CGCG--T------------ATGATTTCCTTT-TC-----TG-----------ATTTT---C-CT----CACTTT------GGTTCCGTGAAAATTTT--CC--AACTC-ACTGGGG-------------------GA-GACTGCGCATGTC-CGCTATCGATAG--G---------------SizeHit CountTotal NormTotal
No Reads
droEug1
C-------TCCAGATGACCTCCGCCGTGGGCATCATTGGGAAAGTCTACGGTGAGTGTGTT-AC------AACAA-CCTCATCCAT---T----------------CATTAAC-ATCTCGCAA------TC------AAAG------------------------------GATGGATCGGTTT-TATGGT------G-----------TGAATACTTCACTGCACCTC-TTTGGTTT-C-----CT-------TTTGGG------TTTT-----C----------T-----------CTTTCTTT--------TG-----------ATTTT--TCG-T----CACTTT------GGTTCCGTGAAAATTTT--CC--AATTC-TGTGGGG----GTG-G-----------GCATCTGCGCATGTCCCGCTATCGATAG--A---------------SizeHit CountTotal NormTotal
No Reads
dm3
C-------TCCAGATGACCTCCACCGTGGGCATCATTGGGAAAGTCTACGGTGAGTGTGGC-ACGCATTTA-----TTTCATTCCCCA-------------A-CCCCATCACCTTTTTAGCCC------TC------GAAG----------------------------------GATCGGTTTTTCTGGT------G-----------TGAATACTTCACTGCACCCTTTTTGGTTTTT-----CT----------CAG------TTTC---TTCTTAG-T------------ATGATTTTCTTT-T-----------------------T---C-CT-------TT------CGGTTTCGTGAAAATTCTATCC--AATTTGAGTGGTG--AAT-AGGG-------GGTG-TAGTGCGCATGTCCCGCTATCGATATCGGT----------G---SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................................................................................................TTTTAGCCC------TC------GAAG----------------------------------GATCGG....................................................................................................................................................................................................................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000010000000000000000000000000000000000000000000000100000000000000000100000000000000000000000100000000010
..........................................................................................................................................AAG----------------------------------GATCGGTTTTTCTGGT------G-----------T.......................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000001100000000000000000001000000000000000000000000000000000000
.................................................................................................................TTTTTAGCCC------TC------GAAG----------------------------------GATCG.....................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000020000000000000000000000000000000000000001000000000000
...............................................................................................................CCTTTTTAGCCC------TC------GAAG----------------------------------GA........................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................AT-AGGG-------GGTG-TAGTGCGCATG.................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................GAAG----------------------------------GATCGGTTTTTCTGGT------G-----------........................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................ATTTGAGTGGTG--AAT-AGGG-------GG...............................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000010
..........................................................................................................................................AAG----------------------------------GATCGGTTTTTCTGGT------G-----------TG......................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
............GATGACCTCCACCGTGGGCAT........................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000100
...............................ATCATTGGGAAAGTCTACG.......................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
......................................................................................................................................................................................TTTTCTGGT------G-----------TGAATACTTCA.............................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................TTCTATCC--AATTTGAGTGGTG--................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................GCATTTA-----TTTCATTCCCCA-------------A-C.................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................TCTTT-T-----------------------T---C-CT-------TT------CGGTTTCGT..............................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................TGAGTGGTG--AAT-AGGG-------GGT..............................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.....................CACCGTGGGCATCATTGGGA................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.........................................AAGTCTACGGTGAGTGTGG.............................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
...........................................................................................................ATCACCTTTTTAGCCC------TC------GAA.............................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
.............................................CTACGGTGAGTGTGGC-ACGCA......................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................................TCGGTTTTTCTGGT------G-----------TGAATA..................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
...................................................................................................................TTTAGCCC------TC------GAAG----------------------------------GATCGGT...................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..................................................................................................................................C------GAAG----------------------------------GATCGGTTTTTCTGGT------G-----------T.......................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
........................................AAAGTCTACGGTGAGTGTGG.............................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................TCTATCC--AATTTGAGTGGTG--A...............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................TTTTGGTTTTT-----CT----------CAG------TTTC---T.......................................................................................................................................................................................2111.0010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................CGCATGTCCCGCTATCGATAT..................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
....................CCACCGTGGGCATCATTGGGA................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................................................................................................................................................................................................................................................................................TGAGTGGTG--AAT-AGGG-------GGTG-T...........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.............................................CTACGGTGAGTGTGGC-ACGC.......................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................AAAGTCTACGGTGAGTGT...............................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
............................................TCTACGGTGAGTGTGGC-ACGCA......................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.................................CATTGGGAAAGTCTACGGTGA...................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................CTTT-T-----------------------T---C-CT-------TT------CGGTTTCGTG.............................................................................................2111.0010000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................T-----CT----------CAG------TTTC---TTCTTAG-T------------ATG................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................C------GAAG----------------------------------GATCGGTTTTTCTGGT------....................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................TC------GAAG----------------------------------GATCGGTTTTTCTGG...........................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.................................................................................................................TTTTTAGCCC------TC------GAAG----------------------------------GATCGG....................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................AT-AGGG-------GGTG-TAGTGCGCATGT................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................GGTG--AAT-AGGG-------GGTG-TAGTGC......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...................................................................................................................................................................................................................................................................................................................T-----------------------T---C-CT-------TT------CGGTTTCGTGAAAA.........................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................GCATCATTGGGAAAGTCTACGGTGAG..................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
................................TCATTGGGAAAGTCTACGGTGAGTGT...............................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............GACCTCCACCGTGGGCATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................TTCTTT-T-----------------------T---C-CT-------TT------CGGTTTCG...............................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCCGCTATCGATATCGGT----------G---2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.....................CACCGTGGGCATCATTGGGAAAGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.................................CATTGGGAAAGTCTACGGTG....................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................GGTGAGTGTGGC-ACGCATT....................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................GATTTTCTTT-T-----------------------T---C-CT-------TT------CGGT...................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
................................................................................................................................................................................................................................................................................................................TT-T-----------------------T---C-CT-------TT------CGGTTTCGTGAA...........................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............................CATCATTGGGAAAGTCTACGG......................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................TTGAGTGGTG--AAT-AGGG-------GGTG-............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...............................ATCATTGGGAAAGTCTACGAGT....................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................TTGGGAAAGTCTACGGTGAGTG................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
...........................GGGCATCATTGGGAAAGTCTA.........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................TGGGAAAGTCTACGGTGAGTG................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..........................................................................................................................................................................................CTGGT------G-----------TGAATACTTCACTGC.........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............GACCTCCACCGTGGGCATCATTGGG.................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................CATCACCTTTTTAGCCC------TC------GA..............................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................TTTGAGTGGTG--AAT-AGGG-------GGT..............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
...........AGATGACCTCCACCGTGGGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................TTCGTGAAAATTCTATCC--AATTTGAGT......................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CTCCACCGTGGGCATCATTGGGAAAGT............................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................TTGAGTGGTG--AAT-AGGG-------GGT..............................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...............................ATCATTGGGAAAGTCTACGTGT....................................................................................................................................................................................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TCATTGGGAAAGTCTACGCAC....................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
droSim2
C-------TCCAGATGACCTCCACCGTGGGCATCATTGGGAAAGTCTACGGTGAGTGTGGC-ACGCATTCA-----TTTCACCCTTCA---------------CCCCATCACCTTTTTAGCCC------TC------GAAG----------------------------------GATCGGTTTTTCTGGT------G-----------TGAATACTTCACTGCACCCTTTTTGGTTTTC-----CT----------CAG------TTTC---TACTTCG-T------------ATGGTTTTCTTT-T-----------------------T---C-CT-------TT------CGGTTTCGTGAAAATTCTATCC--AATTCGAGTGGTG--AAT-AGGG-------GATG-TTGTGCGCATGCCCCGCTATCGGTATCGGT--------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................................................................................................................................TCGGTTTTTCTGGT------G-----------TGAATA..................................................................................................................................................................................................................................................2111.00100000000100000000
.................................................................................................................................................................................................................TGAATACTTCACTGCACCC.....................................................................................................................................................................................................................................1911.00100001000000000000
...................................TTGGGAAAGTCTACGGTGAGT.................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000100000000000
.................................CATTGGGAAAGTCTACGGTGA...................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000100000000
.......................................................................................................................GCCC------TC------GAAG----------------------------------GATCGGTTT.................................................................................................................................................................................................................................................................................1911.00100000000001000000
....................................................................TCA-----TTTCACCCTTCA---------------CCCCAT............................................................................................................................................................................................................................................................................................................................................................2111.00100001000000000000
.............................GCATCATTGGGAAAGTCTA.........................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000001000000000
.......................................................................................................................................................................................................................CTTCACTGCACCCTTTTTGGT.............................................................................................................................................................................................................................2111.00100000000010000000
............................................................................................................................................................................................................................................TTTC-----CT----------CAG------TTTC---TACTTCG-T------------ATGGT..............................................................................................................................................................2611.00100010000000000000
....................................................................TCA-----TTTCACCCTTCA---------------CCCCATC...........................................................................................................................................................................................................................................................................................................................................................2211.00100001000000000000
.......................................................TGTGGC-ACGCATTCA-----TTTCACC......................................................................................................................................................................................................................................................................................................................................................................................2211.00100000100000000000
...............................................................................................................................................................................................................................................................................................................TTT-T-----------------------T---C-CT-------TT------CGGTTTCGTGA............................................................................................2111.00100000000010000000
...........................................................................................................................................................................................................................................................................................................................................................................................ATTCGAGTGGTG--AAT-AGG.........................................................1811.00100001000000000000
droSec2
C-------TCCAGATGACCTCCACCGTGGGCATCATTGGGAAAGTCTACGGTGAGTGTGGC-ACGCATTCA-----TTTCACCCTTCA---------------TCCCATCACCTTTTTAGCCC------TC------GAAG----------------------------------GATCGGTTTTTCTGAT------G-----------TGAATACTTCACTGCACCCTTTTTGGTTTTC-----CT----------CAG------TTTC---TTCTTCG-T------------ATGATTTTCTTT-T-----------------------T---C-CT-------TT------CGGTTTCGTGAAAATTCTATCC--AATTCGAGTGGTG--AAT-ATGG-------GGTG-TTGTGCGCATGCCCCGCTATCGGTATCGGT--------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................................................................................................................................................................................................................TC---TTCTTCG-T------------ATGATTTTCTT........................................................................................................................................................2111.0011000
.......................................................................................................................................................................................TTTCTGAT------G-----------TGAATACTTCACT...........................................................................................................................................................................................................................................2211.0010100
...............................................................................................................................................................................................................................................................................................................TTT-T-----------------------T---C-CT-------TT------CGGTTTCGTGA............................................................................................2111.0011000
.................................CATTGGGAAAGTCTACGGTGAGTGT...............................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100
..............................................................................................................................................................................................................................................................................................................................................................................................................TGG-------GGTG-TTGTGCGCATGCCC..............................2111.0010100
......................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCCGCTATCGGTATCGG...............2011.0010001
............................................................................................................................................................................................................................................................................................................................................................................................TTCGAGTGGTG--AAT-ATGG-------GG...............................................2011.0011000
.............................................................................................................................................................................................................................................................................................................................................................................................................ATGG-------GGTG-TTGTGCGCATGCC...............................2111.0010100
..................................ATTGGGAAAGTCTACGGTGAG..................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
...................................................................................................................................................................................................................................................................................................................................................................................................GGTG--AAT-ATGG-------GGTG-TTGTGC......................................2111.0010001
..................................................................................................................................C------GAAG----------------------------------GATCGGTTTTTCTGAT------G-----------TGA.....................................................................................................................................................................................................................................................2511.0010100
................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGCATGCCCCGCTATCGGT....................2111.0010001
.............................................................................................................................................................................................................................................................................................................................................................................................TCGAGTGGTG--AAT-ATGG-------GGTG-T...........................................2211.0010001
.......................................GAAAGTCTACGGTGAGTGT...............................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100
...................................................................................................................TTTAGCCC------TC------GAAG----------------------------------GATCGGT...................................................................................................................................................................................................................................................................................2111.0010100
.....................................................................................................................................................................................................................................................................................................................................................................................................TG--AAT-ATGG-------GGTG-TTGTGCGC....................................2111.0010100
..........................................................................................................CATCACCTTTTTAGCCC------TC------GA..............................................................................................................................................................................................................................................................................................................................2111.0010001
..................................................................................................................TTTTAGCCC------TC------GAAG----------------------------------GATCGG....................................................................................................................................................................................................................................................................................2111.0010100
....................................................................................................................TTAGCCC------TC------GAAG----------------------------------GATCGG....................................................................................................................................................................................................................................................................................1911.0010001
droYak3
C-------TCCAGATGACCTCCGCCGTGGGCATCATTGGGAAAGTCTACGGTGAGTGTGGC-ACACAATCA-----TTTCGCCC----------------------CATCACCTTTTTAGCCC------CC------GAAG----------------------------------GATCGGTTTTTATGGT------G-----------TGAATACTTCGCTGCACCCT-TTTGGTTTTC-----CT----------GAG------TTCC---T-CTTGC-T------------ATGATTTTCTTTTT-----------------------T---C-CT-------TT------CGGTTTCGTGAAAATTCTATCC--AATGG-AGTGGGG--AAT-G-GG-------GGTG-TACTGCGCATGTCCCGCTATCGGTATCGGT--------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................................CATTGGGAAAGTCTACGGTGAGTGT...............................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
................................TCATTGGGAAAGTCTACGGTGAGTGT...............................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
...............................ATCATTGGGAAAGTCTACG.......................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
...........AGATGACCTCCGCCGTGGGCAT........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
...............................ATCATTGGGAAAGTCTACGA......................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
..............................................................................................................................................................................................................................................................................................................CTTTTT-----------------------T---C-CT-------TT------CGGTTTCGT..............................................................................................2111.00100000010000
......................................................................................................................................................................................................................................TTTGGTTTTC-----CT----------GAG------TTCC---T-CTTGC-T------------ATG................................................................................................................................................................2911.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCCGCTATCGGTATCGGT--------------2011.00100000010000
.....................................................................................................................................................................................................................TACTTCGCTGCACCCT-TTTGG..............................................................................................................................................................................................................................2111.00101000000000
...............................................................CACAATCA-----TTTCGCCC----------------------CATCA..........................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.........CCAGATGACCTCCGCCGTGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
droEre2
C-------TCCAGATGACCTCCGCCGTGGGCATCATTGGGAAAGTCTACGGTGAGTGTGGC-ACCCAATCA-----TTTCGCCC----------------------AATCACCTTTTAAGCCC------TC------AAAG----------------------------------GATCGGTTTTTATGGT------G-----------TGAATACTTCGCTGCACCCTTTTTGGTTTTC-----CT----------GAG------TTCC---T-CTTGC-T------------ATGATTTTCTTTTT-----------------------T---C-CT-------TT------CGATTTCGTGAAAATTCTATCC--AACTG-AGTGGGG--AGT-G-GG-------GCGG-TACTGCGCATGTCCCGCTATCGGTATCGGT----------G---SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................................................................................................................................................................................CTTCGCTGCACCCTTTTTGG..............................................................................................................................................................................................................................2011.0011000000
.................................CATTGGGAAAGTCTACGGTGAGTGT...............................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000010
..........CAGATGACCTCCGCCGTGGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
...............GACCTCCGCCGTGGGCATCATTGGGAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000100

Generated: 05/17/2015 at 04:31 AM