ID:

dvi_5457

 Coordinate:

scaffold_12875:6212899-6212997 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.1 -12.7 -12.7

Flybase annnotation

exon [dvir_GLEANR_6879:2]; CDS [Dvir\GJ21528-cds]; CDS [Dvir\GJ21528-cds]; exon [dvir_GLEANR_6879:3]; intron [Dvir\GJ21528-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------##################################################
GAGCGATGCGGCCGGCGGCGCAAGTTTGGCCGTTGATGCGGATGCCTCCGGTAAGAAAACGACAAATGCGACAACAGCAGCAACAAGTGGAGCATATGCGAATCCATTCCAAGCCTATTTATCCAATCTCTCCCCTGAACATGGCGCAGGTCGTTCACTGAATATCGACCTGTCGACGGCGCTGTCTGGCGCTGAGGCG
**************************************************................((((.((....(((.......((((..(((.((.............)).)))...)))).........)))....)).)))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060659
Argentina_testes_total
 SRR060657
140_testes_total
 V116
male body		 GSM1528803
follicle cells		 SRR060683
160_testes_total
 SRR060660
Argentina_ovaries_total
 M027
male body		 SRR060661
160x9_0-2h_embryos_total
 SRR060662
9x160_0-2h_embryos_total
 SRR060670
9_testes_total
 SRR060671
9x160_males_carcasses_total
 SRR060673
9_ovaries_total
 SRR060678
9x140_testes_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060687
9_0-2h_embryos_total
 SRR060689
160x9_testes_total
 SRR060663
160_0-2h_embryos_total
 SRR060655
9x160_testes_total
 SRR060684
140x9_0-2h_embryos_total
...............................GTTGATGCGGATGCCTCCGGTC.................................................................................................................................................. 22 1 1 2.00 2 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................CGACCTGTCGACGGCGCTGTCT............ 22 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................CGCAAGTTTGGCCGTTGATGC................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.................................................................................................................................................TCCGGTCGTTCACTGAATATC................................. 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...................GCAAGTTTGGCCGTTGATGCGGATGC.......................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................CAAGTTTGGCCGTTGATGCG............................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................CCGGTCGTTCACTGAATATC................................. 20 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
......................................................................................................................................CTGAACATGGCGCAGGTCGTTCACTG....................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................GTCGACGGCGCTGTCTGGCGCTGAG... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................CGTTGATGCGGATGCCTCCGGT................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................AGGTCGTTCACTGAATATCG................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................GCTGTCTGGCGCTGAGGCG 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................TGCCTCCGGTAAGAAAACGAC........................................................................................................................................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................TTTGGCCGTTGATGCGGATGCCT........................................................................................................................................................ 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................CAACAAGTGGAGCATATGCGA.................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................TTGATGCGGATGCCTCCG..................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................CAACAAGTGGAGCATATGCGAAT................................................................................................ 23 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................TGAATATCGACCTGTCGACGGCG.................. 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...........................GGCCGTTGATGCGGATGCCT........................................................................................................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.................GCGCAAGTTTGGCCGTTGAT.................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
GAGCGATGCGGCCGGCGGCGC.................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................GCCGTTGATGCGGATGCCTCCGGTCG................................................................................................................................................. 26 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................ATCGACCTGTCGACGGCGCTGTCTGG.......... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................ATCGACCTGTCGACGGCGCT................ 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................GAACATGGCGCAGGTCGTT............................................ 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................GTTGATGCGGATGCCTCCG..................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................CGTTGATGCGGATGCCTCCGGTC.................................................................................................................................................. 23 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TATCGACGGCGGTGTTTGGC......... 20 3 6 0.50 3 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................GTCGACGGCGCTGTCTGGC......... 19 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................CGACAAGTGCGATAACAGCC........................................................................................................................ 20 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
....................................................................................AAGTGGAGCATGTGCGCAGCC.............................................................................................. 21 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
......................................................................................................................................CTGAACATGGCGAATGTC............................................... 18 2 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.........................................................................................................................................................................GTGGCGAAGGCGCTGTCTG........... 19 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

CTCGCTACGCCGGCCGCCGCGTTCAAACCGGCAACTACGCCTACGGAGGCCATTCTTTTGCTGTTTACGCTGTTGTCGTCGTTGTTCACCTCGTATACGCTTAGGTAAGGTTCGGATAAATAGGTTAGAGAGGGGACTTGTACCGCGTCCAGCAAGTGACTTATAGCTGGACAGCTGCCGCGACAGACCGCGACTCCGC
**************************************************................((((.((....(((.......((((..(((.((.............)).)))...)))).........)))....)).)))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060686
Argx9_0-2h_embryos_total
 M047
female body
 SRR060682
9x140_0-2h_embryos_total
 SRR060687
9_0-2h_embryos_total
 M027
male body		 V053
head
 SRR060658
140_ovaries_total
 SRR060671
9x160_males_carcasses_total
 SRR060666
160_males_carcasses_total
.TCGCTACGCGGACCGCCGTGT................................................................................................................................................................................. 21 3 7 0.86 6 0 3 2 1 0 0 0 0 0
.TCGCTACGCGGACCGCCGTGTT................................................................................................................................................................................ 22 3 2 0.50 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................GCCGCGACAGAGTGCGAGTCC.. 21 3 5 0.20 1 0 0 0 0 0 1 0 0 0
.........................................................................................................................................................................GACAGCTGCCTCGAGAGAA........... 19 3 10 0.20 2 0 0 0 0 2 0 0 0 0
.....................................................................................................TAGGTAAAGTTAGGATAAA............................................................................... 19 2 6 0.17 1 0 0 0 0 0 0 1 0 0
......................................................................................................AGGTGAGGATCGGATAGAT.............................................................................. 19 3 6 0.17 1 0 0 0 1 0 0 0 0 0
......................................................................................................AGGTGAGGATCGGATAGA............................................................................... 18 3 20 0.15 3 2 0 1 0 0 0 0 0 0
...........................................................................................................................GTTAGCGGGGGCACTTGTA......................................................... 19 3 7 0.14 1 0 1 0 0 0 0 0 0 0
..........................................................................................TTGTAAACGCCTAGGTAAGGT........................................................................................ 21 3 7 0.14 1 0 0 0 0 0 0 0 1 0
..............................................................................................................................AGAGAGGAGATTTCTACCG...................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12875:6212849-6213047 + dvi_5457 GA---G--CGATGCGG---------------------------------------------CCGGCGGCGCAAGTTTGGCCGTTGA---------TG------------CGGATGCCT------CCGGTAAGAAAACGACAAAT---GCGA---------------CAACAGCAGC------AA------CAAGTGGAGCATATGCGAATCCATTCCAAGCCTATTTATCCAATCTCTCCCCTGAACATGGCGCAGGTCGTTCACTGAATATCGACCTGTCGACGGCGCTGTCTGGCGCTGAGGCG
droMoj3 scaffold_6496:23819833-23820070 - dmo_1236 GA---G--CGATGCAGCTGGAGGAGCAGGCGGAGGCAGTGGAGGAGGGGTCGTA------------GGCGGCAGCTTGGCTGTCGA---------TG------------CGGATGGAT------CCGGTAAGAAAAATGCGACA---AATG---------------CGACAGCAGCAGCAACAG------CCAGCGGAGCTTATGCGAATCCATTCCAAGCCTATTTATCCAATCTCTCCCCTGAACATGGCGCAGGTCGTTCCCTAAATATCGACCTCTCGACCGCACTGTCCGGCGCCGAGGCG
droGri2 scaffold_15112:1101677-1101917 + GCCAAG--CGATGTTG---------------------------------------------CCGGCGGCGGCAGCTCAAGCGGT------------GCCGATGGTACCTCCGATGCCT------CCGGTAAGAAAACAGCGATTAGTTCCACTAAGACTAAGAGCGATGCAACAGCAGCAGCAGTGACTAGCAGCGGAGCATATGCGAATCCATTCCAAGCCTATTTATCGAATCTCTCCCCCGAACATGGCGCAGGTCGTTCACTCAATATCGACCTGTCGACAGCGTTGTCCGGTGCGGATGCA
droWil2 scf2_1100000004822:1342436-1342652 - GG---GTG--A------------------------------------------AGCCACATCTGGTAGTGCCAGCTCATCGCTAGATAACAACGATG------------CCGATGCCTCGGCCACCGGTAAGAACACGTCCTCG---TCCT---------------CTGGAACGACTTC------------AACTGGAGCCTATGCCAATCCATTCCAAGCCTATTTATCCAATCTCTCCCCCGAACATGGCGCAGGACGTTCTCTAAATATCGATCTGTCCAGCGCTCTATCCGGAGCGGATGCC
dp5 3:8160334-8160538 - GA---G--CGACACCG---------------------------------------------CTGGCAGTGCCAGCTCGTCCATTGA---------TG------------CCGATGCCT------CCGGTAAGAACTCAACCACA---TCAA---------------CTACGACAGCATCAGAAA------CGACTGGAGCCTATGCCAATCCATTCCAAGCGTATTTATCCAATCTCTCCCCCGAACATGGCGCAGGGCGTTCTTTGAACATCGACCTATCGACGGCCCTCTCGGGCGCGGAAGCC
droPer2 scaffold_4:2037830-2038034 - GA---G--CGACACCG---------------------------------------------CTGGCAGTGCCAGCTCGTCCATTGA---------TG------------CCGATGCCT------CCGGTAAGAACTCAACCACA---TCAA---------------CTACGACAGCATCAGAAA------CGACTGGAGCCTATGCCAATCCATTCCAAGCGTATTTATCCAATCTCTCCCCCGAACATGGCGCAGGGCGTTCTTTGAACATCGACCTATCGACGGCCCTCTCGGGCGCGGAAGCC
droAna3 scaffold_13266:17158013-17158213 - G---------AGGCCG---------------------------------------------CCGGCGGTGCTGGCTCGTCCCTAGA---------TG------------CGGATGCCT------CCGGTAAGAACACAACCACA---GCGA---------------ACACAACGGCGTCAGAAG------CGACCGGAGCCTATGCAAATCCATTCCAAGCCTACTTATCCAATCTCTCCCCCGAACATGGCGCAGGACGTTCTCTGAACATCGACCTATCCACGGCACTATCCGGCGCCGAAGCC
droBip1 scf7180000396735:415768-415968 - G---------AGGCTG---------------------------------------------CCGGCGGTGCTGGCTCGTCCCTAGA---------CG------------CGGATGCCT------CTGGTAAGAACTCAACCTCA---GCGA---------------ACACAACGGCGTCAGAAG------CGACCGGAGCCTATGCCAATCCATTCCAAGCCTACTTATCCAATCTCTCCCCCGAACATGGCGCAGGACGTTCTTTGAACATCGACTTATCCACTGCACTATCCGGCTCTGAAGCC
droKik1 scf7180000302817:297838-298040 - G-------CGAGGACG---------------------------------------------CCGGCAGTGCCGGATCGTCCCTAGA---------TG------------CGGATGCCT------CCGGTAAGAACTCAACCACA---TCGA---------------CCACAACGGCGTCAGAAT------CGACCGGAGCCTATGCCAACCCATTCCAAGCCTACTTATCCAATCTTTCCCCCGAACATGGCGCAGGACGATCTCTGAACATTGACCTATCGACGGCGCTTTCCGGCGCCGAGGCC
droFic1 scf7180000454066:1763059-1763261 + G-------CGAGGCTG---------------------------------------------CCGGCAGCGCCGGCTCCTCCGTTGA---------TG------------CGGATGCCT------CCGGTAAGAACTCAACCACA---TCGA---------------CCACAACGGCGTCAGAAT------CGACCGGAGCCTATGCCAATCCATTCCAAGCCTACTTATCCAATCTCTCCCCCGAACATGGCGCAGGACGATCCCTGAACATTGACCTATCAACCGCGCTCTCTGGCGCCGATGCC
droEle1 scf7180000491271:191775-191977 - G-------CGAGGCTG---------------------------------------------CCGGCAGCGCCGGCTCCTCCGTTGA---------TG------------CGGATGCCT------CCGGTAAGAACTCAACCACA---TCGA---------------CCACAACGGCGTCAGAAT------CGACCAGAGCCTATGCCAATCCATTCCAAGCCTACTTATCCAATCTCTCCCCCGAACATGGCGCAGGACGATCCCTGAACATTGACCTTTCGGCATCGCTGTCCGGCTCCGAGGCC
droRho1 scf7180000779260:22702-22904 - G-------CGAGGCTG---------------------------------------------CCGGCAGTGCCGGCTCCTCCGTTGA---------TG------------CGGATGCCT------CCGGTAAGAACTCAACCACA---TCGA---------------CCACAACGGCGTCAGAAT------CGACCAGAGCCTATGCCAATCCATTCCAAGCCTACTTATCCAATCTCTCCCCCGAACATGGCGCAGGACGATCCCTAAACATTGACCTATCGACTGCGCTGTCCGGTGCCGAGGCC
droBia1 scf7180000302291:281117-281319 + GA-------GAGGCTA---------------------------------------------CCGGCAGTGCCGGCTCCTCCGTTGA---------TG------------CGGATGCCT------CCGGTAAGAACACAGCCACA---TCGA---------------CCACAACGGCGTCAGAAT------CGACCGGAGCCTATGCCAACCCATTCCAAGCCTACTTATCCAATCTCTCCCCCGAACATGGCGCAGGACGATCCCTGAATATTGACTTGTCGACGGCGCTGTCGGGTGCCGAGGCC
droTak1 scf7180000415401:780235-780435 + G---------AGGCGG---------------------------------------------CCGGCAGTGCCGGCTCCTCCGTTGA---------TG------------CGGATGCCT------CCGGTAAGAACTCAACCACA---TCGA---------------CCACAACGGCGTCAGAAT------CGACCGGAGCCTATGCCAATCCATTCCAAGCCTACTTATCCAATCTCTCCCCCGAACATGGCGCAGGACGATCCCTGAACATTGACCTATCGACGGCGCTGTCCGGCGCCGAGGCC
droEug1 scf7180000409462:2999007-2999209 + G-------CGAGACTG---------------------------------------------CCGGCAGCGCCGGCTCCTCCGTTGA---------TG------------CGGATGCCT------CCGGTAAGAACTCAACCTCA---TCGA---------------CCACAACGGCGTCAGAAT------CGACCGGAGCCTATGCCAATCCATTCCAAGCCTACTTATCCAATCTCTCCCCCGAACATGGCGCAGGACGATCCCTGAATATTGACCTATCGACGGCTCTCTCTGGCTCCGAGGCC
dm3 chr2R:9846555-9846753 - GGTCGGCG--A------------------------------------------A------------GGTGCCGGCTCCTCCGTTGA---------TG------------CGGATGCCC------CCGGTAAGAACTCAACCACA---TCGA---------------CCACAACGGCGTCAAAAT------CGACCGGAGCCTATGCCAATCCATTCCAAGCCTACTTATCCAATCTCTCCCCCGAACATGGCGCAGGACGATCCCTGAATATTGACCTATCGACGGCCCTACCCGGCGCCGATGCC
droSim2 2r:10534474-10534672 - dsi_7186 GGTCGGCG--A------------------------------------------A------------GGTGCCGGCTCCTCCGTTGA---------TG------------CGGATGCCC------CCGGTAAGAACTCAACCACA---TCGA---------------CCACAACGGCGTCAAAAT------CGACCGGAGCCTATGCCAATCCATTCCAAGCCTACTTATCCAATCTCTCCCCCGAACATGGCGCAGGACGATCCCTGAATATTGACCTATCGACAGCCCTACCCGGCGCCGATGCC
droSec2 scaffold_239:16777-16975 - GGTCGGCG--A------------------------------------------A------------GGTGCCGGCTCCTCCGTTGA---------TG------------CGGATGCCC------CCGGTAAGAACTCAACCACA---TCGA---------------CCACAACGGCGTCAAAAT------CGACCGGAGCCTATGCCAATCCATTCCAAGCCTACTTATCCAATCTCTCCCCCCAACATGGCGCAGGACGATCCCTGAATATTGACCTATCGACGGCCCTACCCGGCGCCGATGCC
droYak3 2R:7107291-7107489 + dya_475 GGTCGGCG--A------------------------------------------A------------GGTGCCGGCTCCTCCGTTGA---------TG------------CGGATGCCT------CCGGTAAGAACTCAACCACA---TCGA---------------CCACAACGGCGTCAGAAT------CGACCGGAGCCTATGCCAATCCATTCCAAGCCTACTTATCCAATCTCTCCCCCGAACATGGCGCAGGACGATCCCTTAATATTGACCTATCGACGGCCCTATCCGGCGCCGATGCC
droEre2 scaffold_4845:15975312-15975510 + GGTCGGCG--A------------------------------------------A------------GGTGCCGGCTCCTCCGTTGA---------TG------------CGGATGCCT------CCGGTAAGAACTCAACCACA---TCGA---------------CCACAACGGCGTCAGAAT------CGACCGGAGCGTATGCCAATCCATTCCAAGCCTACTTATCCAATCTCTCCCCCGAACATGGCGCAGGACGATCCCTGAATATTGACCTATCAACGGCCCTATCCGGCGCCGATGCC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
GA---G--CGATGCGG---------------------------------------------CCGGCGGCGCAAGTTTGGCCGTTGA---------TG------------CGGATGCCT------CCGGTAAGAAAACGACAAAT---GCGA---------------CAACAGCAGC------AA------CAAGTGGAGCATATGCGAATCCATTCCAAGCCTATTTATCCAATCTCTCCCCTGAACATGGCGCAGGTCGTTCACTGAATATCGACCTGTCGACGGCGCTGTCTGGCGCTGAGGCGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................................................................GTTGA---------TG------------CGGATGCCT------CCGGTC................................................................................................................................................................................2212.002000000000001000000000000000000000000000000000000000000000000010
................................................................................................................................................................................................................................................................................CGACCTGTCGACGGCGCTGTCT............2212.002000000000000000000000000000000000000000000000000000000000000002
....................................................................CGCAAGTTTGGCCGTTGA---------TG------------C....................................................................................................................................................................................................2111.001000000000000000000000000000000000000100000000000000000000000000
.....................................................................GCAAGTTTGGCCGTTGA---------TG------------CGGATGC..............................................................................................................................................................................................2611.001000000000100000000000000000000000000000000000000000000000000000
......................................................................CAAGTTTGGCCGTTGA---------TG------------CG...................................................................................................................................................................................................2011.001000000000000100000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................CTGAACATGGCGCAGGTCGTTCACTG.......................................2611.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................GTCGACGGCGCTGTCTGGCGCTGAG...2511.001001000000000000000000000000000000000000000000000000000000000000
................................................................................CGTTGA---------TG------------CGGATGCCT------CCGGT.................................................................................................................................................................................2211.001000000010000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................AGGTCGTTCACTGAATATCG................................2011.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................GCTGTCTGGCGCTGAGGCG1911.001000000000000000000000000000000000100000000000000000000000000000
.................................................................................................................TGCCT------CCGGTAAGAAAACGAC......................................................................................................................................................................2111.001000000010000000000000000000000000000000000000000000000000000000
..........................................................................TTTGGCCGTTGA---------TG------------CGGATGCCT------......................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................................................................................C------AA------CAAGTGGAGCATATGCGA..................................................................................................2111.001000000000100000000000000000000000000000000000000000000000000000
..................................................................................TTGA---------TG------------CGGATGCCT------CCG...................................................................................................................................................................................1811.001000000000010000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................C------AA------CAAGTGGAGCATATGCGAAT................................................................................................2311.001000000000000000000000000000000000100000000000000000000000000000
.........................................................................................................................................................................................................................................................................TGAATATCGACCTGTCGACGGCG..................2311.001000000000000000000000000000000000000000100000000000000000000000
.............................................................................GGCCGTTGA---------TG------------CGGATGCCT------......................................................................................................................................................................................2011.001000000000000000000000000000010000000000000000000000000000000000
...................................................................GCGCAAGTTTGGCCGTTGA---------T..................................................................................................................................................................................................................2011.001000000000000000000000001000000000000000000000000000000000000000
GA---G--CGATGCGG---------------------------------------------CCGGCGGCGC...........................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................GCCGTTGA---------TG------------CGGATGCCT------CCGGTCG...............................................................................................................................................................................2611.001000000000100000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................ATCGACCTGTCGACGGCGCTGTCTGG..........2611.001000000000000000000000000000000000001000000000000000000000000000
..............................................................................................................................................................................................................................................................................ATCGACCTGTCGACGGCGCT................2011.001000000000000000000000100000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................GAACATGGCGCAGGTCGTT............................................1911.001000000000100000000000000000000000000000000000000000000000000000
.................................................................................GTTGA---------TG------------CGGATGCCT------CCG...................................................................................................................................................................................1911.001000000010000000000000000000000000000000000000000000000000000000
................................................................................CGTTGA---------TG------------CGGATGCCT------CCGGTC................................................................................................................................................................................2311.001100000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................GTCGACGGCGCTGTCTGGC.........1920.501001000000000000000000000000000000000000000000000000000000000000
droMoj3
GA---G--CGATGCAGCTGGAGGAGCAGGCGGAGGCAGTGGAGGAGGGGTCGTA------------GGCGGCAGCTTGGCTGTCGA---------TG------------CGGATGGAT------CCGGTAAGAAAAATGCGACA---AATG---------------CGACAGCAGCAGCAACAG------CCAGCGGAGCTTATGCGAATCCATTCCAAGCCTATTTATCCAATCTCTCCCCTGAACATGGCGCAGGTCGTTCCCTAAATATCGACCTCTCGACCGCACTGTCCGGCGCCGAGGCGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................................................................................................................................................................................................................................................ACCGCACTGTCCGGCGCCGAGGC.2311.001100000
....................................................................................................................................................................................................................................TCCAATCTCTCCCCTGAACATG........................................................2211.001100000
.....................................................................GGCAGCTTGGCTGTCGA---------TG------------CGGATG...............................................................................................................................................................................................2511.001100000
...................................................................................................................................................................................................................................................................GTTCCCTAAATATCGACCT............................1911.001100000
.........GATGCAGCTGGAGGAGCAGGCGGA.................................................................................................................................................................................................................................................................................2411.001000001
.......................................................................................................................................................................................................................................................................................TCGACCGCACTGTCCGGCGCCGA....2311.001100000
..............................................................................................................................................................................................CCAGCGGAGCTTATGCGAAT................................................................................................2011.001000001
..................................................................................TCGA---------TG------------CGGATGGAT------CCGGTAAGA.............................................................................................................................................................................2411.001000001
...............GCTGGAGGAGCAGGCGGA.................................................................................................................................................................................................................................................................................1811.001100000
..................................................................................................................................................................................................................................................................................ACCTCTCGACCGCACTGTCCGGCGC.......2511.001100000
.........................................................................GCTTGGCTGTCGA---------TG------------CGGATGG..............................................................................................................................................................................................2211.001000001
..................................................................................................................................AGAAAAATGCGACA---AATG---------------CGAC........................................................................................................................................2211.001100000
.....................................................A------------GGCGGCAGCTTGGCTGTC..............................................................................................................................................................................................................................1911.001000010
...................................................................................................................................GAAAAATGCGACA---AATG---------------CGACAGCAGC..................................................................................................................................2711.001000001
..........................AGGCGGAGGCAGTGGAGGAGGG..................................................................................................................................................................................................................................................................2211.001100000
droGri2
GCCAAG--CGATGTTG---------------------------------------------CCGGCGGCGGCAGCTCAAGCGGT------------GCCGATGGTACCTCCGATGCCT------CCGGTAAGAAAACAGCGATTAGTTCCACTAAGACTAAGAGCGATGCAACAGCAGCAGCAGTGACTAGCAGCGGAGCATATGCGAATCCATTCCAAGCCTATTTATCGAATCTCTCCCCCGAACATGGCGCAGGTCGTTCACTCAATATCGACCTGTCGACAGCGTTGTCCGGTGCGGATGCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
GG---GTG--A------------------------------------------AGCCACATCTGGTAGTGCCAGCTCATCGCTAGATAACAACGATG------------CCGATGCCTCGGCCACCGGTAAGAACACGTCCTCG---TCCT---------------CTGGAACGACTTC------------AACTGGAGCCTATGCCAATCCATTCCAAGCCTATTTATCCAATCTCTCCCCCGAACATGGCGCAGGACGTTCTCTAAATATCGATCTGTCCAGCGCTCTATCCGGAGCGGATGCCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................................................................................................................................................................................ATCCAATCTCTCCCCCGAACATGGC......................................................2512.00202000
.......................................................................................AACAACGATG------------CCGATGCCTCG..........................................................................................................................................................................................2112.00200101
...............................................................................................................................GTAAGAACACGTCCTCG---TCCT---------------CTGGAAC.....................................................................................................................................2811.00101000
..........A------------------------------------------AGCCACATCTGGTAGTGCCAGCTC.....................................................................................................................................................................................................................................2511.00100010
.............................................................................................................................CGGTAAGAACACGTCCTCG---TC.............................................................................................................................................................2111.00110000
.............................................................................................GATG------------CCGATGCCTCGGCCACCGGAC................................................................................................................................................................................2511.00110000
..........................................................CATCTGGTAGTGCCAGCTCATCGCTA..............................................................................................................................................................................................................................2611.00100100
.................................................................................................................................AAGAACACGTCCTCG---TCCT---------------CT..........................................................................................................................................2111.00100010
......................................................................................................................................................................................................................................................................CTCTAAATATCGATCTGTCCAGCGCT..................2611.00100100
..................................................................................................................................................................................C------------AACTGGAGCCTATGCCAAT................................................................................................2011.00101000
......................................................................................................................................................................CTGGAACGACTTC------------AACTGGAGC..........................................................................................................2211.00100100
............................................................................................................................................................................................................................................................GCAGGACGTTCTCTAAATATCGATCT............................2611.00100010
..........................................................................................................................................................................................................................................................................AAATATCGATCTGTCCAGCGCT..................2211.00100100
................................................................................................................................................................................TTC------------AACTGGAGCCTATGCC...................................................................................................1911.00100010
......................................................GCCACATCTGGTAGTGCCAGCT......................................................................................................................................................................................................................................2211.00101000
...................................................................................................................................................................................................................................................................GTTCTCTAAATATCGATCTGTCCAGC.....................2611.00100010
dp5
GA---G--CGACACCG---------------------------------------------CTGGCAGTGCCAGCTCGTCCATTGA---------TG------------CCGATGCCT------CCGGTAAGAACTCAACCACA---TCAA---------------CTACGACAGCATCAGAAA------CGACTGGAGCCTATGCCAATCCATTCCAAGCGTATTTATCCAATCTCTCCCCCGAACATGGCGCAGGGCGTTCTTTGAACATCGACCTATCGACGGCCCTCTCGGGCGCGGAAGCCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............................................................................................................................................................................................................................................................................ACATCGACCTATCGACGGCCCTCTCGGGC.........2911.0010010000000
.................................................................................ATTGA---------TG------------CCGATGCCT------CCGGGC................................................................................................................................................................................2211.0010100000000
..........................................................................CTCGTCCATTGA---------TG------------CCGATGCC.............................................................................................................................................................................................2211.0010100000000
.............................................................................................................................................................................................................................................................................CATCGACCTATCGACGGCCCTCTCGGG..........2711.0010100000000
............................................................................................................................................................................................................................................CTCCCCCGAACATGGCGCAGGGC...............................................2311.0010100000000
.....................................................................................................................................................................................................................................................................TCTTTGAACATCGACCTATCGACGGC...................2611.0010000000010
....................................................................................................................................................................................................................................................................................CTATCGACGGCCCTCTCGGGC.........2111.0010100000000
....................................................................................GA---------TG------------CCGATGCCT------CCGGTAAG..............................................................................................................................................................................2111.0010100000000
....................................................................................................................................................................................................................................TCCAATCTCTCCCCCGAACAT.........................................................2111.0010100000000
............................................................................................................................................................................................................................................................................ACATCGACCTATCGACGGCCC.................2111.0010100000000
........................................................................................................................................................................................................................................ATCTCTCCCCCGAACATGGC......................................................2011.0010100000000
................................................................................CATTGA---------TG------------CCGATGCCT------CCGGGC................................................................................................................................................................................2311.0010100000000
..............................................................................................................................................................................................................................................................................ATCGACCTATCGACGGCCCTCTCGGG..........2611.0010100000000
.....................................................................................................................................................................................AAA------CGACTGGAGCCTATGCCAATC...............................................................................................2411.0010000001000
droPer2
GA---G--CGACACCG---------------------------------------------CTGGCAGTGCCAGCTCGTCCATTGA---------TG------------CCGATGCCT------CCGGTAAGAACTCAACCACA---TCAA---------------CTACGACAGCATCAGAAA------CGACTGGAGCCTATGCCAATCCATTCCAAGCGTATTTATCCAATCTCTCCCCCGAACATGGCGCAGGGCGTTCTTTGAACATCGACCTATCGACGGCCCTCTCGGGCGCGGAAGCCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................................................................................................................................................................................................................................................CTATCGACGGCCCTCTCG............1812.002200000
..............................................................................................................................................................................................................................................................................ATCGACCTATCGACGGCC..................1811.001100000
...................................................................................................................................................................................................................................................GAACATGGCGCAGGGCGC.............................................1811.001000010
.................................................................................................................................................................................................................................................................................GACCTATCGACGGCCCTCTCGGGCGCGGA....2911.001100000
....................................................................................................................................................................................GAAA------CGACTGGAGCCTATGCC...................................................................................................2111.001010000
droAna3
G---------AGGCCG---------------------------------------------CCGGCGGTGCTGGCTCGTCCCTAGA---------TG------------CGGATGCCT------CCGGTAAGAACACAACCACA---GCGA---------------ACACAACGGCGTCAGAAG------CGACCGGAGCCTATGCAAATCCATTCCAAGCCTACTTATCCAATCTCTCCCCCGAACATGGCGCAGGACGTTCTCTGAACATCGACCTATCCACGGCACTATCCGGCGCCGAAGCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................G------------CGGATGCCT------CCGGTAAGAACACA........................................................................................................................................................................2411.001100000
.................................................................................................................................AAGAACACAACCACA---GCGA---------------ACACA.......................................................................................................................................2411.001100000
......................................................................................................................................CACAACCACA---GCGA---------------ACACAACGGC..................................................................................................................................2411.001100000
..........................................................................................................................................................................................................................................................GCGCAGGACGTTCTCTGAACATCGACCT............................2811.001010000
.................................................................................................................................................................................................................................................................................GACCTATCCACGGCACTATCCGGCGCC......2711.001100000
......................................................................................................................................................................................................................................................................................ATCCACGGCACTATCCGGCGCCGAAGC.2711.001010000
.............................................................................................................................................................................................................................................TCCCCCGAACATGGCGCAG..................................................1911.001100000
.............................................................................................................................................................................................................................................................................CATCGACCTATCCACGGCA..................1911.001100000
....................................................................................................................................................................................................................................................................................CTATCCACGGCACTATCCGG..........2011.001000001
.................................................................................................................................................................................................................................................................................GACCTATCCACGGCACTATCCGGC.........2411.001001000
..................................................................................................................................................................................................................................................................CGTTCTCTGAACATCGACCTATCCACGG....................2811.001100000
.....................................................................GCTGGCTCGTCCCTAGA---------TG------------CGG..................................................................................................................................................................................................2211.001100000
droBip1
G---------AGGCTG---------------------------------------------CCGGCGGTGCTGGCTCGTCCCTAGA---------CG------------CGGATGCCT------CTGGTAAGAACTCAACCTCA---GCGA---------------ACACAACGGCGTCAGAAG------CGACCGGAGCCTATGCCAATCCATTCCAAGCCTACTTATCCAATCTCTCCCCCGAACATGGCGCAGGACGTTCTTTGAACATCGACTTATCCACTGCACTATCCGGCTCTGAAGCCSizeHit CountTotal NormTotal
No Reads
droKik1
G-------CGAGGACG---------------------------------------------CCGGCAGTGCCGGATCGTCCCTAGA---------TG------------CGGATGCCT------CCGGTAAGAACTCAACCACA---TCGA---------------CCACAACGGCGTCAGAAT------CGACCGGAGCCTATGCCAACCCATTCCAAGCCTACTTATCCAATCTTTCCCCCGAACATGGCGCAGGACGATCTCTGAACATTGACCTATCGACGGCGCTTTCCGGCGCCGAGGCCSizeHit CountTotal NormTotal
No Reads
droFic1
G-------CGAGGCTG---------------------------------------------CCGGCAGCGCCGGCTCCTCCGTTGA---------TG------------CGGATGCCT------CCGGTAAGAACTCAACCACA---TCGA---------------CCACAACGGCGTCAGAAT------CGACCGGAGCCTATGCCAATCCATTCCAAGCCTACTTATCCAATCTCTCCCCCGAACATGGCGCAGGACGATCCCTGAACATTGACCTATCAACCGCGCTCTCTGGCGCCGATGCCSizeHit CountTotal NormTotal
No Reads
droEle1
G-------CGAGGCTG---------------------------------------------CCGGCAGCGCCGGCTCCTCCGTTGA---------TG------------CGGATGCCT------CCGGTAAGAACTCAACCACA---TCGA---------------CCACAACGGCGTCAGAAT------CGACCAGAGCCTATGCCAATCCATTCCAAGCCTACTTATCCAATCTCTCCCCCGAACATGGCGCAGGACGATCCCTGAACATTGACCTTTCGGCATCGCTGTCCGGCTCCGAGGCCSizeHit CountTotal NormTotal
No Reads
droRho1
G-------CGAGGCTG---------------------------------------------CCGGCAGTGCCGGCTCCTCCGTTGA---------TG------------CGGATGCCT------CCGGTAAGAACTCAACCACA---TCGA---------------CCACAACGGCGTCAGAAT------CGACCAGAGCCTATGCCAATCCATTCCAAGCCTACTTATCCAATCTCTCCCCCGAACATGGCGCAGGACGATCCCTAAACATTGACCTATCGACTGCGCTGTCCGGTGCCGAGGCCSizeHit CountTotal NormTotal
No Reads
droBia1
GA-------GAGGCTA---------------------------------------------CCGGCAGTGCCGGCTCCTCCGTTGA---------TG------------CGGATGCCT------CCGGTAAGAACACAGCCACA---TCGA---------------CCACAACGGCGTCAGAAT------CGACCGGAGCCTATGCCAACCCATTCCAAGCCTACTTATCCAATCTCTCCCCCGAACATGGCGCAGGACGATCCCTGAATATTGACTTGTCGACGGCGCTGTCGGGTGCCGAGGCCSizeHit CountTotal NormTotal
No Reads
droTak1
G---------AGGCGG---------------------------------------------CCGGCAGTGCCGGCTCCTCCGTTGA---------TG------------CGGATGCCT------CCGGTAAGAACTCAACCACA---TCGA---------------CCACAACGGCGTCAGAAT------CGACCGGAGCCTATGCCAATCCATTCCAAGCCTACTTATCCAATCTCTCCCCCGAACATGGCGCAGGACGATCCCTGAACATTGACCTATCGACGGCGCTGTCCGGCGCCGAGGCCSizeHit CountTotal NormTotal
No Reads
droEug1
G-------CGAGACTG---------------------------------------------CCGGCAGCGCCGGCTCCTCCGTTGA---------TG------------CGGATGCCT------CCGGTAAGAACTCAACCTCA---TCGA---------------CCACAACGGCGTCAGAAT------CGACCGGAGCCTATGCCAATCCATTCCAAGCCTACTTATCCAATCTCTCCCCCGAACATGGCGCAGGACGATCCCTGAATATTGACCTATCGACGGCTCTCTCTGGCTCCGAGGCCSizeHit CountTotal NormTotal
No Reads
dm3
GGTCGGCG--A------------------------------------------A------------GGTGCCGGCTCCTCCGTTGA---------TG------------CGGATGCCC------CCGGTAAGAACTCAACCACA---TCGA---------------CCACAACGGCGTCAAAAT------CGACCGGAGCCTATGCCAATCCATTCCAAGCCTACTTATCCAATCTCTCCCCCGAACATGGCGCAGGACGATCCCTGAATATTGACCTATCGACGGCCCTACCCGGCGCCGATGCCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................................................................................................................................................................................AAAAT------CGACCGGAGCCTATGCC...................................................................................................2216.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................AGGACGATCCCTGAATATTGACC.............................2316.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................TCAAAAT------CGACCGGAGCCTATGCCAA.................................................................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000010000000000000000000000000
..................................................................................................................................................................................................................................................................CGATCCCTGAATATTGACCTA...........................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................TATCCAATCTCTCCCCCGAACATGGCGC....................................................2814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................AAAAT------CGACCGGAGCCTATGCCAATCC..............................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................ATGGCGCAGGACGATCCCTGAAT....................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................AACTCAACCACA---TCGA---------------CCACA.......................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................TTGA---------TG------------CGGATGCCC------CCG...................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000
.........................................................................................................................................AACCACA---TCGA---------------CCACAACGGCG.................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................TATTGACCTATCGACGGCCCTACCCGGC.........2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................GTAAGAACTCAACCACA---TC.............................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................TTGA---------TG------------CGGATGCCC------CCGGT.................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000
....................................................................................................................................................................................AAAT------CGACCGGAGCCTATGC....................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................................................................................CCTATCGACGGCCCTACCCGGCGC.......2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000100000000
..........................................................................................................................................................................................................................................................................GAATATTGACCTATCGACGGCT..................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......CG--A------------------------------------------A------------GGTGCCGGCTCCTCCGT...............................................................................................................................................................................................................................2112.0020000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................GTTGA---------TG------------CGGATGCCC------CCG...................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000001000000
...............................................................................................................................................................................................................................................................................TTGACCTATCGACGGCCCTACCCGGCGCC......2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................GCGTCAAAAT------CGACCGGAGCC.........................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................GTTGA---------TG------------CGGATGCCC------CCGGAC................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......G--A------------------------------------------A------------GGTGCCGGCTCCTCCGTTGA---------...................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
.........................................................................................................................................................................................................................................TCTCTCCCCCGAACATGGCGCAGGACGA.............................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................CCCGAACATGGCGCAGGACGATCCC.........................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.....................................................................................................................................................................................................................................................................TCCCTGAATATTGACCTATCGACGGCCC.................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................CCCCGAACATGGCGCAGGACGATCCC.........................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................CGTTGA---------TG------------CGGATGCCC------CCGGCC................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................CGTTGA---------TG------------CGGATGCCC------CCGGAC................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................CAAAAT------CGACCGGAGCCTATGC....................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...CGGCG--A------------------------------------------A------------GGTGCCGGCTCCTCC.................................................................................................................................................................................................................................2211.0010000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................CCGTTGA---------TG------------CGGATGCCC------CC....................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................CTCAACCACA---TCGA---------------CCACAACGGCGTC...............................................................................................................................2711.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................GTAAGAACTCAACCACA---TCGA---------------CCACAAC.....................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................AACCACA---TCGA---------------CCACAACGGCGTC...............................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................CTACTTATCCAATCTCTCCCC................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................TCGA---------------CCACAACGGCGTCAAAA...........................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................TCGACGGCCCTACCCGGCGC.......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................CCGGCTCCTCCGTTGA---------TG------------CGG..................................................................................................................................................................................................2111.0010000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................CCTGAATATTGACCTATCGACGGCCC.................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................TGAATATTGACCTATCGACGGC...................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................CGTTGA---------TG------------CGGATGCCC------CCGG..................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
................................................................................CGTTGA---------TG------------CGGATGCCC------CCGGA.................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
................................................................................CGTTGA---------TG------------CGGATGCCC------CCGGT.................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................AAGCCTACTTATCCAATCTCT....................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................AAAT------CGACCGGAGCCTATGCCA..................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................TCCGTTGA---------TG------------CGGATGCCC------CCGGACG...............................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................CGACGGCCCTACCCGGCGCC......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................AATCTCTCCCCCGAACATGGC......................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................TGCCGGCTCCTCCGTTGA---------TG------------CGGA.................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................GCAGGACGATCCCTGAATATTGACCTA...........................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................GGATGCCC------CCGGTAAGAACTC.........................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................CCGTTGA---------TG------------CGGATGCCC------CCGGTAAGAACT..........................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................AAAT------CGACCGGAGCCTATGCCAAA................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................AAT------CGACCGGAGCCTATGCCA..................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................GTTGA---------TG------------CGGATGCCC------CCGG..................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................AAAAT------CGACCGGAGCCTATGCCAA.................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................GACGATCCCTGAATATTGACC.............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................GA---------TG------------CGGATGCCC------CCGGTAAGA.............................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
.......G--A------------------------------------------A------------GGTGCCGGCTCCTCC.................................................................................................................................................................................................................................1811.0010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................TACTTATCCAATCTCTCCCCCGAACA..........................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......CG--A------------------------------------------A------------GGTGCCGGCTCCTCCGTTGA---------...................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................TG------------CGGATGCCC------CCGGTAAGAAC...........................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...........................................................................................................................................................................ACGGCGTCAAAAT------CGACCGGAGC..........................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................TGCCGGCTCCTCCGTTGA---------TG------------C....................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GGCG--A------------------------------------------A------------GGTGCCGGCTCCTCCGTT..............................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................CGTCAAAAT------CGACCGGAGCCTAT......................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..................................................................................................................................................................................................................CCATTCCAAGCCTACTTATCCA..........................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................TCCCCCGAACATGGCGCAGGACGATCCCT........................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................CC------CCGGTAAGAACTCAACCA....................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................CAAGCCTACTTATCCAATCTCTC...................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................GACCGGAGCCTATGCCAATCC..............................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................GCTCCTCCGTTGA---------TG------------CGGATG...............................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................ATCCCTGAATATTGACCTATCGACG.....................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................ATCTCTCCCCCGAACATGGCGT....................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................CC------CCGGTAAGAACTCAACCAC...................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...................................................................................TGA---------TG------------CGGATGCCC------CCGGTAAA..............................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................TTATCCAATCTCTCCCCCGAACATGGCGC....................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................CGGCGTCAAAAT------CGACCGGAGC..........................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........A------------------------------------------A------------GGTGCCGGCTCCTCCGTTG.............................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................TCAACCACA---TCGA---------------CCACAACGGCGTCA..............................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
...........................................................................TCCTCCGTTGA---------TG------------CGGATGCCC------CCGGT.................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................TCTCCCCCGAACATGGCGCAG..................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................GGCCCTACCCGGCGCCGATGC.2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................CATGGCGCAGGACGATCCC.........................................1911.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................ACGGCCCTACCCGGCGCCGAT...2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................TAAGAACTCAACCACA---TCGA---------------C...........................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.................................................................................GTTGA---------TG------------CGGATGCCC------CC....................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................CGTTGA---------TG------------CGGATGCCC------CC....................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................CGTTGA---------TG------------CGGATGCCC------CCG...................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................GTCAAAAT------CGACCGGAGCCTATGCCAA.................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................TTATCCAATCTCTCCCCCGAACAT.........................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GGCG--A------------------------------------------A------------GGTGCCGGCTCCAAA.................................................................................................................................................................................................................................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GGTCGGCG--A------------------------------------------A------------GGTGCCGGCTCCTCCGTTGA---------TG------------CGGATGCCC------CCGGTAAGAACTCAACCACA---TCGA---------------CCACAACGGCGTCAAAAT------CGACCGGAGCCTATGCCAATCCATTCCAAGCCTACTTATCCAATCTCTCCCCCGAACATGGCGCAGGACGATCCCTGAATATTGACCTATCGACAGCCCTACCCGGCGCCGATGCCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................................................................................................................................TCAAAAT------CGACCGGAGCC.........................................................................................................1811.00110000000000000000
.................................................................................................................................................................................................................................................CCGAACATGGCGCAGGACGAT............................................2111.00100000000000001000
.................................................................................................................................AAGAACTCAACCACA---TCGA---------------CCACAACGG...................................................................................................................................2811.00101000000000000000
............................................................................CCTCCGTTGA---------TG------------CGGATGCCC------C.....................................................................................................................................................................................2211.00100001000000000000
.............................................................................CTCCGTTGA---------TG------------CGGATGCCC------CCGG..................................................................................................................................................................................2411.00100000000001000000
...............................................................................................................................................................................................................................................................................TTGACCTATCGACAGCCC.................1811.00100001000000000000
..................................................................................TTGA---------TG------------CGGATGCCC------CCGGTAAGAACT..........................................................................................................................................................................2711.00100000001000000000
..................................................................................................................................................................................CAAAAT------CGACCGGAGCCTATG.....................................................................................................2111.00100000000000001000
..............................................................................................................................................................................................................................................................AGGACGATCCCTGAATAT..................................1811.00100000100000000000
................................................................................................................................................................................GTCAAAAT------CGACCGGAGCCTATGC....................................................................................................2411.00110000000000000000
droSec2
GGTCGGCG--A------------------------------------------A------------GGTGCCGGCTCCTCCGTTGA---------TG------------CGGATGCCC------CCGGTAAGAACTCAACCACA---TCGA---------------CCACAACGGCGTCAAAAT------CGACCGGAGCCTATGCCAATCCATTCCAAGCCTACTTATCCAATCTCTCCCCCCAACATGGCGCAGGACGATCCCTGAATATTGACCTATCGACGGCCCTACCCGGCGCCGATGCCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................................................................................................................................................CAAAAT------CGACCGGAGCCTATG.....................................................................................................2120.5010100
......................................................................................................................................................................................................................................................................................ATCGACGGCCCTACCCGGCGCCGA....2420.5010010
................................................................................CGTTGA---------TG------------CGGATGCCC------CCG...................................................................................................................................................................................2020.5010010
........................................................................................................................................................................................................................................................TGGCGCAGGACGATCCCTGA......................................2020.5011000
..........A------------------------------------------A------------GGTGCCGGCTCCTCCGTTG.............................................................................................................................................................................................................................2120.5010001
......................................................................................................................................CTCAACCACA---TCGA---------------CCACAAC.....................................................................................................................................2120.5011000
droYak3
GGTCGGCG--A------------------------------------------A------------GGTGCCGGCTCCTCCGTTGA---------TG------------CGGATGCCT------CCGGTAAGAACTCAACCACA---TCGA---------------CCACAACGGCGTCAGAAT------CGACCGGAGCCTATGCCAATCCATTCCAAGCCTACTTATCCAATCTCTCCCCCGAACATGGCGCAGGACGATCCCTTAATATTGACCTATCGACGGCCCTATCCGGCGCCGATGCCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............................................................................................................................................................................................................................................................................ATTGACCTATCGACGGCC..................1812.00220000000000
.............................................................................................................................................................................................................................................................................TATTGACCTATCGACGGC...................1811.00110000000000
..............................................................................................................................................................................................................................................................................ATTGACCTATCGACGGCCC.................1911.00101000000000
...................................................................................................................CCT------CCGGTAAGAACTCAACCACA---TC.............................................................................................................................................................2511.00101000000000
................................................................................................................................................................................GTCAGAAT------CGACCGGAGCCTA.......................................................................................................2111.00101000000000
...................................................................................................................................................................................................................................................................GATCCCTTAATATTGACCTATCGAC......................2511.00101000000000
......................................................................................................................................................................................AT------CGACCGGAGCCTATGCCA..................................................................................................2011.00100001000000
...........................................................................................................................................................................................................................................................................AATATTGACCTATCGACGGC...................2011.00100000010000
....................................................................................................................................................CGA---------------CCACAACGGCGTCAGA............................................................................................................................1911.00101000000000
...............................................................................................................GATGCCT------CCGGTAAGAACTCAACCA....................................................................................................................................................................2511.00100000010000
.............................................................................................................................................................................................................................CTACTTATCCAATCTCTCCCCCG..............................................................2311.00101000000000
......................................................................................................................................................................CCACAACGGCGTCAGAAT------CGACCGGAGC..........................................................................................................2811.00100001000000
......................................................................................................................................................................................................................................................................CCCTTAATATTGACCTATCGAC......................2211.00101000000000
...................................................................................................................................................................................................................................................................................CCTATCGACGGCCCTATCCGGCGCCGAT...2811.00101000000000
....................................................................................................................................AACTCAACCACA---TCGA---------------CCACAAC.....................................................................................................................................2311.00101000000000
.....................................................................................................................................................................................................................................................................................TATCGACGGCCCTATCCGGCGCC......2311.00101000000000
......................................................................................................................................................................................AT------CGACCGGAGCCTATGCCAATC...............................................................................................2311.00101000000000
.........................................................................................................................................AACCACA---TCGA---------------CCACAACGGCGTCA..............................................................................................................................2511.00101000000000
.............................................................................................................................................................................GGCGTCAGAAT------CGACCGGAGCCTATGC....................................................................................................2711.00110000000000
...............................................................................................................GATGCCT------CCGGTAAGAACT..........................................................................................................................................................................1911.00101000000000
...............................................................................................................................................................................CGTCAGAAT------CGACCGGAGCCTATGCC...................................................................................................2611.00101000000000
.....................................................................................................................................ACTCAACCACA---TCGA---------------CCACAACGG...................................................................................................................................2411.00101000000000
................................................................................CGTTGA---------TG------------CGGATGCCT------CCGGA.................................................................................................................................................................................2211.00100000010000
.....................................................................................................................T------CCGGTAAGAACTCAACCACA---TCGA---------------CC..........................................................................................................................................2711.00110000000000
.....................................................................................................................................................................................................................................................................................TATCGACGGCCCTATCCGGC.........2011.00101000000000
......................................................................................................................................................................................................................................................CATGGCGCAGGACGATCCCTT.......................................2111.00100000010000
.....................................................................................................................................................................................................................................................ACATGGCGCAGGACGATCCCTTAAT....................................2511.00101000000000
............................................................................................................................................................................................................................CCTACTTATCCAATCTCTCCCCC...............................................................2311.00101000000000
........................................................................................................................................................................................................................CAAGCCTACTTATCCAATCT......................................................................2011.00101000000000
..............................................................................................................................................CA---TCGA---------------CCACAACGGCGTCAG.............................................................................................................................2111.00100000010000
................................................................................................................................................................................GTCAGAAT------CGACCGGAGCC.........................................................................................................1911.00100000010000
.....................................................................................................................................................................................................................................................................................TATCGACGGCCCTATCCGGCGCCGA....2511.00101000000000
...........................................................................................................................................................................................................................GCCTACTTATCCAATCTCTCCCCC...............................................................2411.00101000000000
...............................................................................................................................GTAAGAACTCAACCACA---TCGA---------------C...........................................................................................................................................2211.00101000000000
.............................................................................CTCCGTTGA---------TG------------CGGATGCCT------CC....................................................................................................................................................................................2211.00101000000000
.....................................................................................................................T------CCGGTAAGAACTCAACCA....................................................................................................................................................................1911.00101000000000
........................................................................................................................................CAACCACA---TCGA---------------CCACAACGGCGT................................................................................................................................2411.00100100000000
droEre2
GGTCGGCG--A------------------------------------------A------------GGTGCCGGCTCCTCCGTTGA---------TG------------CGGATGCCT------CCGGTAAGAACTCAACCACA---TCGA---------------CCACAACGGCGTCAGAAT------CGACCGGAGCGTATGCCAATCCATTCCAAGCCTACTTATCCAATCTCTCCCCCGAACATGGCGCAGGACGATCCCTGAATATTGACCTATCAACGGCCCTATCCGGCGCCGATGCCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................TGCCGGCTCCTCCGTTGA---------TG------------CGGAT................................................................................................................................................................................................25124.002400000024
.......................................................................................................................................................................................................................................................ATGGCGCAGGACGATCCCTGAATATTGACC.............................3012.0020000002
.......................................................................................................................................................................................................................................................ATGGCGCAGGACGATCCCTGA......................................2112.0020000020
...............................................................................................................GATGCCT------CCGGTAAGAACTC.........................................................................................................................................................................2011.0011000000
................................................................................................................................................................................................................................CTTATCCAATCTCTCCCCCGA.............................................................2111.0011000000
..........................................................................................................................................................................................................................................................GCGCAGGACGATCCCTGAAT....................................2011.0011000000
...............................................................................................................................................................................................GACCGGAGCGTATGCCAATCCATTCC.........................................................................................2611.0010000100
..............................................................................................................................................................................................................................................CCCCCGAACATGGCGCAGGAC...............................................2111.0011000000
....................................................................................................................................................................................GAAT------CGACCGGAGCGTATGCC...................................................................................................2111.0010000100
...................................................................................................................................................................................AGAAT------CGACCGGAGCGTATGCC...................................................................................................2211.0010000100
........................................................................................................................................CAACCACA---TCGA---------------CCACAACGGC..................................................................................................................................2211.0010000010
......................................................................................................................................................................CCACAACGGCGTCAGAAT------....................................................................................................................1811.0011000000
......................................................................................................................................................................................................................................................................................ATCAACGGCCCTATCCGGCGCCG.....2311.0010000100
...................................................................................................................................................................................................................................................................................CCTATCAACGGCCCTATCCGGC.........2211.0011000000
...............................................................................................................GATGCCT------CCGGTAAGAACT..........................................................................................................................................................................1911.0010000010

Generated: 05/17/2015 at 04:30 AM