ID:

dvi_5455

 Coordinate:

scaffold_12875:6205901-6206051 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-32.5 -32.3 -32.3

Flybase annnotation

CDS [Dvir\GJ20806-cds]; exon [dvir_GLEANR_6221:2]; intron [Dvir\GJ20806-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TGTTGTGGGCTGGGCATGTGCATTCGCTGGCGTAGCCGTGGAGCTATCTAATCGCTGCCCGTGGAGAGTAGGTACAATGCTAATAACAAGTCCTGATAACACAGTCGAAACACATACGCTGATAAGCACAAGTCGTCGTGAGTGGCATATAGACATGTCTATATACATAAATACTTATACGTACGCTCTCTTCCATTGCAGCTGGAGCATCGCAAGAATTATGTGGATGAGACCGAGGAGCGTTTCCGCCT
**************************************************....((((..((((((((.((((((...(((.......))).(((......)))......(((.((((.((((........)))).)))).)))..(((((((....)))))))................)))).))))).))))).))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060657
140_testes_total
 M047
female body
 SRR060670
9_testes_total
 SRR060681
Argx9_testes_total
 SRR060686
Argx9_0-2h_embryos_total
 V116
male body		 M061
embryo
 SRR060679
140x9_testes_total
 SRR060659
Argentina_testes_total
 SRR060667
160_females_carcasses_total
 SRR060674
9x140_ovaries_total
 SRR1106730
embryo_16-30h
 GSM1528803
follicle cells		 SRR060658
140_ovaries_total
 SRR060672
9x160_females_carcasses_total
 SRR060683
160_testes_total
 SRR060664
9_males_carcasses_total
 SRR060671
9x160_males_carcasses_total
 M027
male body		 SRR060660
Argentina_ovaries_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060665
9_females_carcasses_total
 SRR060668
160x9_males_carcasses_total
 SRR060675
140x9_ovaries_total
 SRR060680
 9xArg_testes_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060688
160_ovaries_total
 V047
embryo
 SRR060663
160_0-2h_embryos_total
 V053
head
 SRR060662
9x160_0-2h_embryos_total
 SRR060684
140x9_0-2h_embryos_total
......................................................................................................................................................................................................................................GACCGAGGAGCGTTTCCGCCT 21 0 1 3.00 3 1 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................TGAGACCGAGGAGCGTTT...... 18 0 1 3.00 3 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................GACCGAGGAGCGTTTCCGCC. 20 0 1 3.00 3 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................GAGACCGAGGAGCGTTTC..... 18 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................GAGACCGAGGAGCGTTTCCGCC. 22 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................CGCAAGAATTATGTGGATGAGAC.................. 23 0 1 2.00 2 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................TGAGACCGAGGAGCGTTTCC.... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................CTGGAGCATCGCAAGAACTATGTGGA........................ 26 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................ACTATGTGGATGAGACCGAGGAGCGTTTCCGCCT 34 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................AGTCGTCGTGAGTGGCATATAG................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................TTCAAGCTGGAGCATCGCAAGAA................................. 23 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................AAGAACTATGTGGATGAGACCG................ 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................CTGGAGCATCGGAAGAATTAT............................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................GTGGATGAGACCGAGGAGCGTTTC..... 24 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................CGCAAGAACTATGTGGATGAGACCGAGGAGCGTTTCCGCCT 41 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TGTGGATGAGACCGAGGAGC.......... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..............................................................................................................CACATACGATTATAAGCACAAGTCG.................................................................................................................... 25 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................ATGTGGATGAGACCGAGGAGCGTT....... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................TGAGACCGAGGAGCGTTTCCGCC. 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................GGAGCATCGCAAGAACTATGTG.......................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................GATGAGACCGAGGAGCGTTTCCGC.. 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................AGAATTATGTGGATGAGACC................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................GCATCGCAAGAATTATGTGG......................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................GGATGAGACCGAGGAGCGTTTCCGCCT 27 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................CGCAAGAATTATGTGGATGAGACCGA............... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................AAGCTGGAGCATCGCAAG................................... 18 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AACTATGTGGATGAGACCGAG.............. 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.................................................................................................................................................................................................................................GATGAGACCGAGGAGCGTTTC..... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TCGCAAGAATTATGTGGAT....................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................TTCAAGCTGGAGCATCGCAAGA.................................. 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GAACTATGTGGATGAGACC................. 19 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................ATGAGGATGAGACCGAGGAGCGTTT...... 25 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................TGAGACCGAGGAGCGTTTCCGCCT 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................AGACCGAGGAGCGTTTCCGCC. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GAATTATGTGGATGAGACC................. 19 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................TATGTGGATGAGACCGAGGA............ 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................GACCGAGGAGCGTTTCCGC.. 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................CGCAAGAACTATGTGGATGA..................... 20 1 2 1.00 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................GGAGCATCGCAAGAACTATGTGGATGAGACCGAGGA............ 36 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GCAAGAACTATGTGGATGAGACCGAGG............. 27 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GAACTATGTGGATGAGACCGAG.............. 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................CGCAAGAACTATGTGGATGAG.................... 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................ATGTGGATGAGACCGAGGAGCGTTTCC.... 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.......................TCGCTGGCGTAGCCGTGGAGCTATC........................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TCGCAAGAACTATGTGGATGAGACCGA............... 27 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................AGAATTATGTGGATGAGACCGAGGAGC.......... 27 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................CAAGAATTATGTGGATGAGAC.................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................GCATCGCAAGAATTATGTGGAT....................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................AGAATTATGTGGATGAGACCG................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................AAGCTGGAGCATCGCAAGA.................................. 19 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................CGCAAGAACTATGTGGATGAGACCGAG.............. 27 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TGGAGCATCGCAAGAACTATGTG.......................... 23 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................TATGTGGATGAGACCGAGGAGCGTTT...... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................AGCTGGAGCATCGCAAGAAC................................ 20 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................CGCAAGAACTATGTGGATGAGACCGA............... 26 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................GATGAGACCGAGGAGCGTTTCCGCCT 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TGTGGATGAGACCGAGGA............ 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................ATCGCAAGAACTATGTGGATGA..................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................TGGATGAGACCGAGGAGCGTTTCCGCC. 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GCAAGAACTATGTGGATGAGACCGAG.............. 26 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................TTCAAGCTGGAGCGTCGCAAGAA................................. 23 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................ATGTGGATGAGACCGAGGAGC.......... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................TCAAGCTGGAGCATCGCAAGAACTATG............................ 27 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................GGATGAGACCGAGGAGCGTTTCC.... 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................GATAAGCACAAGTCGTCGTG............................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................AGACCGAGGAGCGTTTCCGCCT 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................ATGAGACCGAGGAGCGTTT...... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GCAAGAACTATGTGGATGA..................... 19 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..................................................................................................................................................................................................CTTCAAGCTGGAGCATCGCAAGA.................................. 23 3 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................GGAGAATCGCAAGACCTATGTG.......................... 22 3 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................TTCAAGCTGGAGCATCGCAA.................................... 20 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................TTCAAGCTGGAGCATCGC...................................... 18 2 10 0.10 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................GTTGGAGCCTCGCAAGAA................................. 18 2 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.......................................................................................................................................................................................................AGTTGGGGCCTCGCAAGA.................................. 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
........................................................................................................................................................................................................GTTGGGGCCTCGCAAGAA................................. 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
............................................TGTCTAACCGCGGCCCGT............................................................................................................................................................................................. 18 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

ACAACACCCGACCCGTACACGTAAGCGACCGCATCGGCACCTCGATAGATTAGCGACGGGCACCTCTCATCCATGTTACGATTATTGTTCAGGACTATTGTGTCAGCTTTGTGTATGCGACTATTCGTGTTCAGCAGCACTCACCGTATATCTGTACAGATATATGTATTTATGAATATGCATGCGAGAGAAGGTAACGTCGACCTCGTAGCGTTCTTAATACACCTACTCTGGCTCCTCGCAAAGGCGGA
**************************************************....((((..((((((((.((((((...(((.......))).(((......)))......(((.((((.((((........)))).)))).)))..(((((((....)))))))................)))).))))).))))).))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12875:6205851-6206101 - dvi_5455 TGTTGTGGGCTGGGCATGTGCATTCGCTGGCGTAGCCGTGGA-GCTATCTAATCGCTGCCCGTGGAGAGT---AGGTACAATGCTAATA-ACAAGTCCTGATAACACAGTCGAAACACATACGCTGATAAGCACAAGTCGTCGTGAGTGGCATATAGA----CATGT-CTATATACATAAATACTTATACGTA------------------------------CGCTCTCTTCCATTGCAGCTGGAGCATCGCAAGAATTATGTGGATGAGACCGAGGAGCGTTTCCGCCT
droMoj3 scaffold_6496:23829320-23829521 + G-------TCAGGGCATGTGCATTCGATTGTTTGTGTGCGGC-GCTATCTAATCGCTGT--GTGGAGAAT---AGGTATAAAGCTAATA-ACAAGTCTTGATAACAGT-----------TTTTCTGATAAGC--------------------------------GTTATTGTATATATATATGTGTG--------------------------------TCTACACTCTCTCTAATTGCAGCTGGAGCATCGCAAGACTTATCAAGATGAGACTGAGGAACGCTTCCGCCT
droGri2 scaffold_15112:1094922-1095143 - G-------G----GCA---------------------GCAGCTGCTATCTAATCGCTTTTTTATGAGTGTACCAACTACAATGCTAATATACAAGTCCTGATAACAGA----AAACA-ACTTGTTGATAA-CACAA--------------------------AACACGCTAGTTGTCAGTATATTTTCACGGCTTCTCTCTTCTCTCTCTCTCTCTCTCTCTCT-----GGGTTTTTACAGCTTGAGCATCGCAAGCAATATCAGGATGAGACCGAGGAACGTTTCCGCCT
droWil2 scf2_1100000004512:1179084-1179172 + G-------T----ACA---------------------TAT---------------------------------------------------------------------------------------------------------------------ACCTAAACTTATTTTATAT-----------------------------------------------------ATATAATTTCAGCTGGAACACCGCAAGAACTATGCAGATTCGACTGAGGAGACTTTCCGGAT
dp5 3:15916723-15916821 + T-------A---------------------------------------------------------------------------------------------------------------------------------------------------------CACATGCTATATGTATGTATATTCA--------------------------------ACTATGTGCTTGCCATCCACAGCTGGAGCACCGCAAGAACTACCAGGACGAGACTGAGGAGCGCTTCCGGCT
droPer2 scaffold_4:844025-844123 - T-------A---------------------------------------------------------------------------------------------------------------------------------------------------------CACATGCTATATGTATGTATATTCA--------------------------------ACTATGTGTTTGCCATCCACAGCTGGAGCACCGCAAGAACTACCAGGACGAGACTGAGGAGCGCTTCCGGCT
droAna3 scaffold_13266:17164590-17164642 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGTTGGAACACCGCAAGAACTACCTGGATGAGACCGAGGAGCGCTTCCGCCT
droBip1 scf7180000396735:422209-422261 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCTCGAACACCGCAAGAACTACCAGGACGAGACCGAGGAGCGCTTCCGCCT
droKik1 scf7180000302817:306089-306150 + C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTTTGCAGCTGGAGCACCGCAAGAACTACAACGATGATACCGAGGAGCGTTTCCGTTT
droFic1 scf7180000454066:1753224-1753289 - T-------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTCTATATGCAGTTGGAGCACCGCAAGAACTACCAGGATGAGACCGAGGAACGTTTCCGCCT
droEle1 scf7180000491271:204879-204944 + T-------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTGATATGCAGTTGGAGCACCGCAAGAACTACCAGGATGAAACCGAGGAACGCTTCCGCCT
droRho1 scf7180000778840:1967-2021 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCAGTTGGAGCACCGAAAGCACTACAAGGGTGAAACCGAGGAAAGCTTCCGCCT
droBia1 scf7180000302292:3784935-3785007 + ATATGT-------------------------------------------------------------------------------------------------------------------------------------------------------AT-------------------------------------------------------------------TTCTTTTATATGCAGTTGGAGCACCGCAAGAATTACCTAGATGAAACCGAGGAACGCTTCCGCCT
droTak1 scf7180000415376:70790-70853 + T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTTTATGCAGTTGGAGCACGGCAAGAACTACAATGACGAAACCGAGGAGCGCTTCCGCCT
droEug1 scf7180000409462:2991344-2991409 - T-------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTTATATGCAGTTGGAGCACCGCAAGAACTACCAAGATAATACCGAGGAACGCTTCCGCCT
dm3 chr2R:9854235-9854309 + AATACT-------------------------------------------------------------------------------------------------------------------------------------------------------AA-----------------------------------------------------------------TACTTTTCATTATGCAGCTGGAGCACCGCAAGAACTATCAGGATGAAACCGAGGAGCGTTTCCGCCT
droSim2 2r:10542151-10542226 + ACTTGT-------------------------------------------------------------------------------------------------------------------------------------------------------AA----------------------------------------------------------------CTACTTTTCATATTGCAGCTGGAGCACCGCAAGAACTATCAGGATGATACCGAGGAGCGTTTCCGCCT
droSec2 scaffold_1:7379831-7379906 + ACTTGT-------------------------------------------------------------------------------------------------------------------------------------------------------AA----------------------------------------------------------------CTACTTTTCATATTGCAGCTGGAGCACCGAAAGAACTATCAGGATGATACCGAGGAGCGTTTCCGCCT
droYak3 2R:7099573-7099643 - G-------T----A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTTTTGTTACTGCAGCTGGAGCACCGCAAGAACTATCAGGATGATACCGAGGAGCGTTTCCGCCT
droEre2 scaffold_4845:15967867-15967938 - TGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------G-------------------------------------------------------CTATTTTTCTTTATGCAGCTGGAGCACCGCAAGAACTATCAGGATGATACCGAGGAGCGTTTCCGCCT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TGTTGTGGGCTGGGCATGTGCATTCGCTGGCGTAGCCGTGGA-GCTATCTAATCGCTGCCCGTGGAGAGT---AGGTACAATGCTAATA-ACAAGTCCTGATAACACAGTCGAAACACATACGCTGATAAGCACAAGTCGTCGTGAGTGGCATATAGA----CATGT-CTATATACATAAATACTTATACGTA------------------------------CGCTCTCTTCCATTGCAGCTGGAGCATCGCAAGAATTATGTGGATGAGACCGAGGAGCGTTTCCGCCTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............................................................................................................................................................................................................................................................................GACCGAGGAGCGTTTCCGCCT2113.003000000011000000000000000000000000000000000000000000000000000010
...........................................................................................................................................................................................................................................................................TGAGACCGAGGAGCGTTT......1813.003000000000000000000000000000000010200000000000000000000000000000
..............................................................................................................................................................................................................................................................................GACCGAGGAGCGTTTCCGCC.2013.003000000000100000000000110000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................GAGACCGAGGAGCGTTTC.....1812.002000000010000000000001000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................GAGACCGAGGAGCGTTTCCGCC.2212.002000000010000000000001000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................CGCAAGAATTATGTGGATGAGAC..................2312.002001100000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................TGAGACCGAGGAGCGTTTCC....2011.001000000000000000000100000000000000000000000000000000000000000000
.......................................................................................................................................AGTCGTCGTGAGTGGCATATAG......................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................GTGGATGAGACCGAGGAGCGTTTC.....2411.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................TGTGGATGAGACCGAGGAGC..........2011.001000000000000000000000000000000000000000000000000000000000001000
....................................................................................................................................................................................................................................................................ATGTGGATGAGACCGAGGAGCGTT.......2411.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................TGAGACCGAGGAGCGTTTCCGCC.2311.001000000000000000000001000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................GATGAGACCGAGGAGCGTTTCCGC..2411.001000000000000000000000000100000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................AGAATTATGTGGATGAGACC.................2011.001000000010000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................GCATCGCAAGAATTATGTGG.........................2011.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................GGATGAGACCGAGGAGCGTTTCCGCCT2711.001000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................................................CGCAAGAATTATGTGGATGAGACCGA...............2611.001000000000000000000000000000000000000000000000000000000000000010
.........................................................................................................................................................................................................................................................................GATGAGACCGAGGAGCGTTTC.....2111.001000000000000000001000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................TCGCAAGAATTATGTGGAT.......................1911.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................TGAGACCGAGGAGCGTTTCCGCCT2411.001000000010000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................AGACCGAGGAGCGTTTCCGCC.2111.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................GAATTATGTGGATGAGACC.................1911.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................TATGTGGATGAGACCGAGGA............2011.001000000000000000000000000000000010000000000000000000000000000000
..............................................................................................................................................................................................................................................................................GACCGAGGAGCGTTTCCGC..1911.001000000000000000100000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................ATGTGGATGAGACCGAGGAGCGTTTCC....2711.001000000000000000000000000000000000001000000000000000000000000000
.......................TCGCTGGCGTAGCCGTGGA-GCTATC..................................................................................................................................................................................................................................................2511.001000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................................................................................................................................................AGAATTATGTGGATGAGACCGAGGAGC..........2711.001000100000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................CAAGAATTATGTGGATGAGAC..................2111.001100000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................GCATCGCAAGAATTATGTGGAT.......................2211.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................AGAATTATGTGGATGAGACCG................2111.001000000010000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................TATGTGGATGAGACCGAGGAGCGTTT......2611.001000000000010000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................AGCTGGAGCATCGCAAGAAC................................2011.001000000000000000001000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................GATGAGACCGAGGAGCGTTTCCGCCT2611.001000000010000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................TGTGGATGAGACCGAGGA............1811.001000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................................................................TGGATGAGACCGAGGAGCGTTTCCGCC.2711.001000000000000000000000000010000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................ATGTGGATGAGACCGAGGAGC..........2111.001000000000100000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................GGATGAGACCGAGGAGCGTTTCC....2311.001000000000000000000000000000000010000000000000000000000000000000
.............................................................................................................................GATAAGCACAAGTCGTCGTG..................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................................................................................................................................AGACCGAGGAGCGTTTCCGCCT2211.001000000010000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................ATGAGACCGAGGAGCGTTT......1911.001000000001000000000000000000000000000000000000000000000000000000
droMoj3
G-------TCAGGGCATGTGCATTCGATTGTTTGTGTGCGGC-GCTATCTAATCGCTGT--GTGGAGAAT---AGGTATAAAGCTAATA-ACAAGTCTTGATAACAGT-----------TTTTCTGATAAGC--------------------------------GTTATTGTATATATATATGTGTG--------------------------------TCTACACTCTCTCTAATTGCAGCTGGAGCATCGCAAGACTTATCAAGATGAGACTGAGGAACGCTTCCGCCTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................................................................................................................................................................................................................................................ATCGCAAGACTTATCAAGAT.......................2011.001100000
................................................................................................................................................................................................................................................GCTGGAGCATCGCAAGACT................................1911.001000001
...........................................................................................................................................................................................................................................................GCAAGACTTATCAAGATGAGACTGAG..............2611.001000001
................................................................................................................................................................................................................................................GCTGGAGCATCGCAAGAC.................................1811.001100000
............................................................................................................................................................................................................................................................................GAGACTGAGGAACGCTTCCGCCT2311.001100000
..................................................................................................................................................................................................................................................................TTATCAAGATGAGACTGAG..............1911.001000001
.........................................................................................................................................................................................................................................................................GATGAGACTGAGGAACGCTTCCGCC.2511.001000001
................................................................................................................................................................................................................................................................................CTGAGGAACGCTTCCGCCT1911.001100000
........................................................................................................................................................................................................................................................ATCGCAAGACTTATCAAGATGA.....................2211.001100000
................................................................................................................................................................................................................................................GCTGGAGCATCGCAAGACTT...............................2011.001100000
......................................................................................................................................................................................................................................................................CAAGATGAGACTGAGGAA...........1811.001100000
...................................................................................................................................................................................................................................................GGAGCATCGCAAGACTTAT.............................1911.001000001
.............................................................................................................................................................................................................................................................................AGACTGAGGAACGCTTCC....1811.001100000
......................................................................................................................................................................................................................................................................CAAGATGAGACTGAGGAACGCTTCCGCC.2811.001100000
........................................................................................................................................................................................................................................................ATCGCAAGACTTATCAAGATGAGACTG................2711.001000001
droGri2
G-------G----GCA---------------------GCAGCTGCTATCTAATCGCTTTTTTATGAGTGTACCAACTACAATGCTAATATACAAGTCCTGATAACAGA----AAACA-ACTTGTTGATAA-CACAA--------------------------AACACGCTAGTTGTCAGTATATTTTCACGGCTTCTCTCTTCTCTCTCTCTCTCTCTCTCTCT-----GGGTTTTTACAGCTTGAGCATCGCAAGCAATATCAGGATGAGACCGAGGAACGTTTCCGCCTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
......................................................................................................................................................................................................................................................................CAGGATGAGACCGAGGAAC..........1911.00110
........................................................................................................................................................................................................................................................................GGATGAGACCGAGGAACGTTTCCG...2411.00101
...................................................................................................................................................................................................................................................................TATCAGGATGAGACCGAGGAACG.........2311.00110
droWil2
G-------T----ACA---------------------TAT---------------------------------------------------------------------------------------------------------------------ACCTAAACTTATTTTATAT-----------------------------------------------------ATATAATTTCAGCTGGAACACCGCAAGAACTATGCAGATTCGACTGAGGAGACTTTCCGGATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................................................................................................................................................................................................................................................................ATGCAGATTCGACTGAGGA............1914.00400400
................................................................................................................................................................................................................................................................AACTATGCAGATTCGACTGAGGA............2313.00300300
.............................................................................................................................................................................................................................................................AAGAACTATGCAGATTCGACTGAGGA............2612.00201100
.........................................................................................................................................................................................................................................................................GATTCGACTGAGGAGACTTTCCGGAT2612.00200200
................................................................................................................................................................................................................................................................AACTATGCAGATTCGACTG................1912.00220000
....................................................................................................................................................................................................................................................................ATGCAGATTCGACTGAGGAGACTT.......2412.00200200
...............................................................................................................................................................................................................................................................GAACTATGCAGATTCGACTGAG..............2211.00100100
......................................................................................................................................................................................................................................................ACACCGCAAGAACTATGCAGATTCGACT.................2811.00110000
.........................................................................................................................................................................................................................................................CCGCAAGAACTATGCAGATTCGACTGAGG.............2911.00100100
.................................................................................................................................................................................................................................................CTGGAACACCGCAAGAACTATGC...........................2311.00110000
..........................................................................................................................................................................................................................................................................ATTCGACTGAGGAGACTTTCCGGAT2511.00100100
...........................................................................................................................................................................................................................................................GCAAGAACTATGCAGATTCGACTG................2411.00100010
.........................................................................................................................................................................................................................................................................GATTCGACTGAGGAGACTTT......2011.00100100
................................................................................................................................................................................................................................................................AACTATGCAGATTCGACTGAGG.............2211.00100100
...................................................................................................................................................................................................................................................................TATGCAGATTCGACTGAGGAGACT........2411.00101000
.............................................................................................................................................................................................................................................................................CGACTGAGGAGACTTTCCGGA.2111.00101000
....................................................................................................................................................................................................................................................................ATGCAGATTCGACTGAGGAG...........2011.00110000
.................................................................................................................................................................................................................................................................ACTATGCAGATTCGACTGA...............1911.00110000
.......................................................................................................................................................................................................................................................................CAGATTCGACTGAGGAGACTTTCCGGA.2711.00101000
......................................................................................................................................................................................................................................................................GCAGATTCGACTGAGGAGACT........2111.00110000
..............................................................................................................................................................................................................................................................AGAACTATGCAGATTCGACTG................2111.00110000
.........................................................................................................................................................................................................................................................CCGCAAGAACTATGCAGATTCGACTGA...............2711.00101000
..........................................................................................................................................................................................................................................................................ATTCGACTGAGGAGACTTT......1911.00110000
.........................................................................................................................................................................................................................................................................GATTCGACTGAGGAGACTTTCCG...2311.00100100
...............................................................................................................................................................................................................................................AGCTGGAACACCGCAAGAACT...............................2111.00100001
...................................................................................................................................................................................................................................................................TATGCAGATTCGACTGAGGAGA..........2211.00100100
dp5
T-------A---------------------------------------------------------------------------------------------------------------------------------------------------------CACATGCTATATGTATGTATATTCA--------------------------------ACTATGTGCTTGCCATCCACAGCTGGAGCACCGCAAGAACTACCAGGACGAGACTGAGGAGCGCTTCCGGCTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................................................................................................................................................................................................................................AGGACGAGACTGAGGAGC..........1815.0050000000005
...................................................................................................................................................................................................................................................................TACCAGGACGAGACTGAGGAGCGCT.......2514.0040100000210
..................................................................................................................................................................................................................................................................CTACCAGGACGAGACTGAGGAG...........2214.0040000000040
...............................................................................................................................................................................................................................................................GAACTACCAGGACGAGACTGAGG.............2313.0030200000001
.................................................................................................................................................................................................................................................................ACTACCAGGACGAGACTGAGGAGC..........2413.0030210000000
...........................................................................................................................................................................................................................................................GCAAGAACTACCAGGACGA.....................1912.0020200000000
...................................................................................................................................................................................................................................................................TACCAGGACGAGACTGAGG.............1912.0020100010000
..................................................................................................................................................................................................................................................................CTACCAGGACGAGACTGAGGAGCGCTT......2712.0020100001000
.........................................................................................................................................................................................................................................................................GACGAGACTGAGGAGCGCTT......2012.0020000000002
.....................................................................................................................................................................................................................................................................CCAGGACGAGACTGAGGAGC..........2012.0020000001001
..............................................................................................................................................................................................................................................................................GACTGAGGAGCGCTTCCGGCT2112.0020200000000
............................................................................................................................................................................................................................................................................GAGACTGAGGAGCGCTTCCGGCT2312.0020100000001
.........................................................................................................................................................................................................................................................................GACGAGACTGAGGAGCGCTTCCGGCT2612.0020100000001
..............................................................................................................................................................................................................................................................................GACTGAGGAGCGCTTCCGG..1912.0020200000000
.............................................................................................................................................................................................................................................................................AGACTGAGGAGCGCTTCCGGC.2112.0020000000002
..................................................................................................................................................................................................................................................................CTACCAGGACGAGACTGAGGAGC..........2311.0010100000000
...................................................................................................................................................................................................................................................GGAGCACCGCAAGAACTACCAGGAC.......................2511.0010100000000
......................................................................................................................................................................................................................................................GCACCGCAAGAACTACCAGGACG......................2311.0010100000000
..............................................................................................................................................................................................................................................................AGAACTACCAGGACGAGACTG................2111.0010100000000
....................................................................................................................................................................................................................................................................ACCAGGACGAGACTGAGGAGCGCTTCC....2711.0010100000000
.......................................................................................................................................................................................................................................................CACCGCAAGAACTACCAGGACGAGACC.................2711.0010010000000
..............................................................................................................................................................................................................................ATGTGCTTGCCATCCACAGCTGGA.............................................2411.0010100000000
..................................................................................................................................................................................................................................................TGGAGCACCGCAAGAACT...............................1811.0010100000000
.........................................................................................................................................................................................................................................................................GACGAGACTGAGGAGCGCTTCCG...2311.0010000000001
...................................................................................................................................................................................................................................................................TACCAGGACGAGACTGAGGAGC..........2211.0010000100000
...............................................................................................................................................................................................................................................................GAACTACCAGGACGAGACTGAGGAGC..........2611.0010100000000
............................................................................................................................................................................................................................................................................GAGACTGAGGAGCGCTTCCGGC.2211.0010000000001
......................................................................................................................................................................................................................................................................CAGGACGAGACTGAGGAGCG.........2011.0010000000010
.......................................................................................................................................................................................................................................................CACCGCAAGAACTACCAGGACGAGAC..................2611.0010000000010
............................................................................................................................................................................................................................................................................GAGACTGAGGAGCGCTTCCGG..2111.0010000000010
............................................................................................................................................................................................................................................................CAAGAACTACCAGGACGAGAC..................2111.0010100000000
...........................................................................................................................................................................................................................................................................CGAGACTGAGGAGCGCTTCCGGCT2411.0010000001000
.............................................................................................................................................................................................................................................................AAGAACTACCAGGACGAGACTGAG..............2411.0010100000000
..................................................................................................................................................................................................................................................................CTACCAGGACGAGACTGAGG.............2011.0010100000000
...........................................................................................................................................................................................................................................................................CGAGACTGAGGAGCGCTTCCGGC.2311.0010000000001
..................................................................................................................................................................................................................................................................CTACCAGGACGAGACTGA...............1811.0010100000000
................................................................................................................................................................................................................................................................................CTGAGGAGCGCTTCCGGCT1911.0010100000000
.........................................................................................................................................................................................................................................................................GACGAGACTGAGGAGCGCTTT.....2111.0010100000000
.........................................................................................................................................................................................................................................................CCGCAAGAACTACCAGGAC.......................1911.0010100000000
.......................................................................................................................................................................................................................................................................AGGACGAGACTGAGGAGCG.........1911.0010000000001
........................................................................................................................................................................................................................................................ACCGCAAGAACTACCAGGACGA.....................2211.0010100000000
...........................................................................................................................................................................................................................................................GCAAGAACTACCAGGACGAGACTGA...............2511.0010000000001
...............................................................................................................................................................................................................................................................GAACTACCAGGACGAGACTGAGGAGCG.........2711.0010100000000
........................................................................................................................................................................................................................................................ACCGCAAGAACTACCAGGACGAGACT.................2611.0010010000000
............................................................................................................................................................................................................................................................CAAGAACTACCAGGACGA.....................1811.0010100000000
......................................................................................................................................................................................................................................................................CAGGACGAGACTGAGGAGCGC........2111.0010100000000
...........................................................................................................................................................................................................................................................................CGAGACTGAGGAGCGCTTCCGG..2211.0010000000010
......................................................................................................................................................................................................................................................................CAGGACGAGACTGAGGAGC..........1911.0010100000000
...................................................................................................................................................................................................................................................GGAGCACCGCAAGAACTACCAG..........................2211.0010100000000
....................................................................................................................................................................................................................................................................ACCAGGACGAGACTGAGGAGC..........2111.0010100000000
...........................................................................................................................................................................................................................................................GCAAGAACTACCAGGACGAGA...................2111.0010100000000
droPer2
T-------A---------------------------------------------------------------------------------------------------------------------------------------------------------CACATGCTATATGTATGTATATTCA--------------------------------ACTATGTGTTTGCCATCCACAGCTGGAGCACCGCAAGAACTACCAGGACGAGACTGAGGAGCGCTTCCGGCTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................................................................................................................................................................................................................................................................TACCAGGACGAGACTGAGGAGC..........2212.002200000
................................................................................................................................................................................................................................................................................CTGAGGAGCGCTTCCGGCT1912.002020000
....................................................................................................................................................................................................................................................GAGCACCGCAAGAACTACCAGG.........................2212.002000002
..........................................................................................................................................................................................................................................................CGCAAGAACTACCAGGACGA.....................2011.001010000
.....................................................................................................................................................................................................................................................................CCAGGACGAGACTGAGGAGCGCTTCCGGC.2911.001100000
.........................................................................................................................................................................................................................................................................GACGAGACTGAGGAGCGCTTCCGG..2411.001010000
..............................................................................................................................................................................................................................................................................GACTGAGGAGCGCTTCCGGCT2111.001010000
....................................................................................................................................................................................................................................................................ACCAGGACGAGACTGAGGAGCGCTT......2511.001001000
.......................................................................................................................................................................................................................................................................AGGACGAGACTGAGGAGCGCTTCCGGCT2811.001100000
................................................................................................................................................................................................................................................GCTGGAGCACCGCAAGAACTACCAGGA........................2711.001010000
............................................................................................................................................................................................................................................................................GAGACTGAGGAGCGCTTCC....1911.001100000
........................................................................................................................................................................................................................................................ACCGCAAGAACTACCAGGA........................1911.001010000
.........................................................................................................................................................................................................................................................CCGCAAGAACTACCAGGACGAGACT.................2511.001100000
...................................................................................................................................................................................................................................................................TACCAGGACGAGACTGAGGAGG..........2211.001100000
......................................................................................................................................................................................................................................................................CAGGACGAGACTGAGGAGC..........1911.001000010
droAna3
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGTTGGAACACCGCAAGAACTACCTGGATGAGACCGAGGAGCGCTTCCGCCTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................................................................................................................................................................................................................................................................GACCGAGGAGCGCTTCCGCCT2112.002010001
...........................................................................................................................................................................................................................................................GCAAGAACTACCTGGATGAGACC.................2311.001100000
...................................................................................................................................................................................................................................................................TACCTGGATGAGACCGAGGAGCGCTTCC....2811.001000010
...........................................................................................................................................................................................................................................................GCAAGAACTACCTGGATGAGA...................2111.001000010
...............................................................................................................................................................................................................................................................GAACTACCTGGATGAGACCGAGG.............2311.001100000
..............................................................................................................................................................................................................................................................................GACCGAGGAGCGCTTCCGCC.2011.001000010
......................................................................................................................................................................................................................................................................CTGGATGAGACCGAGGAGC..........1911.001000010
..................................................................................................................................................................................................................................................................CTACCTGGATGAGACCGAGG.............2011.001100000
.....................................................................................................................................................................................................................................................................CCTGGATGAGACCGAGGAGC..........2011.001100000
................................................................................................................................................................................................................................................GTTGGAACACCGCAAGAAC................................1911.001010000
..........................................................................................................................................................................................................................................................CGCAAGAACTACCTGGATGA.....................2011.001010000
..............................................................................................................................................................................................................................................................AGAACTACCTGGATGAGACCGAGGAG...........2611.001000010
...........................................................................................................................................................................................................................................................GCAAGAACTACCTGGATGA.....................1911.001100000
.................................................................................................................................................................................................................................................................ACTACCTGGATGAGACCGAGG.............2111.001000010
..................................................................................................................................................................................................................................................TGGAACACCGCAAGAACTACCTG..........................2311.001100000
.................................................................................................................................................................................................................................................TTGGAACACCGCAAGAACTACCTG..........................2411.001100000
......................................................................................................................................................................................................................................................................CTGGATGAGACCGAGGAGCGCTTCCGCCT2911.001000010
...............................................................................................................................................................................................................................................................GAACTACCTGGATGAGACCGAGGA............2411.001000010
................................................................................................................................................................................................................................................GTTGGAACACCGCAAGAACTACCTG..........................2511.001000100
.........................................................................................................................................................................................................................................................CCGCAAGAACTACCTGGATGAGAC..................2411.001100000
.....................................................................................................................................................................................................................................................AACACCGCAAGAACTACCTGGATGAG....................2611.001100000
droBip1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCTCGAACACCGCAAGAACTACCAGGACGAGACCGAGGAGCGCTTCCGCCTSizeHit CountTotal NormTotal
No Reads
droKik1
C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTTTGCAGCTGGAGCACCGCAAGAACTACAACGATGATACCGAGGAGCGTTTCCGTTTSizeHit CountTotal NormTotal
No Reads
droFic1
T-------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTCTATATGCAGTTGGAGCACCGCAAGAACTACCAGGATGAGACCGAGGAACGTTTCCGCCTSizeHit CountTotal NormTotal
No Reads
droEle1
T-------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTGATATGCAGTTGGAGCACCGCAAGAACTACCAGGATGAAACCGAGGAACGCTTCCGCCTSizeHit CountTotal NormTotal
No Reads
droRho1
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCAGTTGGAGCACCGAAAGCACTACAAGGGTGAAACCGAGGAAAGCTTCCGCCTSizeHit CountTotal NormTotal
No Reads
droBia1
ATATGT-------------------------------------------------------------------------------------------------------------------------------------------------------AT-------------------------------------------------------------------TTCTTTTATATGCAGTTGGAGCACCGCAAGAATTACCTAGATGAAACCGAGGAACGCTTCCGCCTSizeHit CountTotal NormTotal
No Reads
droTak1
T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTTTATGCAGTTGGAGCACGGCAAGAACTACAATGACGAAACCGAGGAGCGCTTCCGCCTSizeHit CountTotal NormTotal
No Reads
droEug1
T-------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTTATATGCAGTTGGAGCACCGCAAGAACTACCAAGATAATACCGAGGAACGCTTCCGCCTSizeHit CountTotal NormTotal
No Reads
dm3
AATACT-------------------------------------------------------------------------------------------------------------------------------------------------------AA-----------------------------------------------------------------TACTTTTCATTATGCAGCTGGAGCACCGCAAGAACTATCAGGATGAAACCGAGGAGCGTTTCCGCCTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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...............................................................................................................................................................................................................................................AGCTGGAGCACCGCAAGAA.................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................ACTATCAGGATGAAACCGA...............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................ACTATCAGGATGAAACCGAGG.............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................CGCAAGAACTATCAGGATGAAACC.................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................CTGGAGCACCGCAAGAAC................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................GGATGAAACCGAGGAGCG.........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................CACCGCAAGAACTATCAGGAT.......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................AGGATGAAACCGAGGAGCGTTTCCGCCT2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................CTATCAGGATGAAACCGAGT.............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................GGAGCACCGCAAGAACTATCAGGATG......................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................AACTATCAGGATGAAACCGAGGAGCG.........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................GGATGAAACCGAGGAGCGTTTCCGCC.2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...................................................................................................................................................................................................................................................GGAGCACCGCAAGAACTATCA...........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................TATCAGGATGAAACCGAGGAGCG.........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................AGCTGGAGCACCGCAAGAACTA..............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................GGATGAAACCGAGGAGCGTTTCCGC..2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................GGAGCACCGCAAGAACTATC............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
droSim2
ACTTGT-------------------------------------------------------------------------------------------------------------------------------------------------------AA----------------------------------------------------------------CTACTTTTCATATTGCAGCTGGAGCACCGCAAGAACTATCAGGATGATACCGAGGAGCGTTTCCGCCTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................................................................................................................................................................................................................................GCAAGAACTATCAGGATGATACCGA...............2513.00300300000000000000
...........................................................................................................................................................................................................................................................GCAAGAACTATCAGGATG......................1812.00200200000000000000
..........................................................................................................................................................................................................................................................CGCAAGAACTATCAGGATG......................1912.00200200000000000000
........................................................................................................................................................................................................................................................ACCGCAAGAACTATCAGGATG......................2112.00210100000000000000
............................................................................................................................................................................................................................................................CAAGAACTATCAGGATGATACCGA...............2412.00202000000000000000
...................................................................................................................................................................................................................................................................TATCAGGATGATACCGAGGAGCGT........2412.00200000000011000000
...................................................................................................................................................................................................................................................................TATCAGGATGATACCGAGGAGCGTT.......2511.00100000001000000000
................................................................................................................................................................................................................................................GCTGGAGCACCGCAAGAACTATCAGGA........................2711.00100000000000001000
..........................................................................................................................................................................................................................................................CGCAAGAACTATCAGGATGATACCGG...............2611.00101000000000000000
...........................................................................................................................................................................................................................................................GCAAGAACTATCAGGA........................1611.00100000001000000000
............................................................................................................................................................................................................................................................CAAGAACTATCAGGATGATACCGAGGA............2711.00101000000000000000
...........................................................................................................................................................................................................................................................GCAAGAACTATCAGGATGATACCGAGGA............2811.00100100000000000000
........................................................................................................................................................................................................................................................................GGATGATACCGAGGAG...........1611.00100000000001000000
............................................................................................................................................................................................................................................................CAAGAACTATCAGGATGA.....................1811.00100100000000000000
...................................................................................................................................................................................................................................................................TATCAGGATGATACCGAGGAGCGTTTC.....2711.00100000000010000000
...........................................................................................................................................................................................................................................................GCAAGAACTATCAGGATGA.....................1911.00100100000000000000
...........................................................................................................................................................................................................................................................GCAAGAACTATCAGGATGATACCGAGGG............2811.00101000000000000000
................................................................................................................................................................................................................................................................................CCGAGGAGCGTTTCCGCC.1811.00100000100000000000
......................................................................................................................................................................................................................................................................CAGGATGATACCGAGGAGC..........1911.00100000000000100000
..................................................................................................................................................................................................................................................TGGAGCACCGCAAGAACTATCAGGA........................2511.00100000000000001000
...........................................................................................................................................................................................................................................................GCAAGAACTATCAGGAT.......................1711.00100000010000000000
..................................................................................................................................................................................................................................................................CTATCAGGATGATACCGAGGA............2111.00100010000000000000
.......................................................................................................................................................................................................................................................CACCGCAAGAACTATCAGGA........................2011.00110000000000000000
droSec2
ACTTGT-------------------------------------------------------------------------------------------------------------------------------------------------------AA----------------------------------------------------------------CTACTTTTCATATTGCAGCTGGAGCACCGAAAGAACTATCAGGATGATACCGAGGAGCGTTTCCGCCTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............................................................................................................................................................................................................................................................................ATACCGAGGAGCGTTTCCGCCT2214.0040310
................................................................................................................................................................................................................................................................AACTATCAGGATGATACCGAGGAGC..........2513.0030210
....................................................................................................................................................................................................................................................................ATCAGGATGATACCGAGGAGC..........2113.0030300
...............................................................................................................................................................................................................................................................GAACTATCAGGATGATACCGAGGAGC..........2612.0020110
..............................................................................................................................................................................................................................................................................TACCGAGGAGCGTTTCCGCCT2112.0020200
....................................................................................................................................................................................................................................................................ATCAGGATGATACCGAGGAG...........2012.0021100
....................................................................................................................................................................................................................................................................ATCAGGATGATACCGAGGA............1912.0020020
..................................................................................................................................................................................................................................................................CTATCAGGATGATACCGAGG.............2011.0010100
.................................................................................................................................................................................................................................................................ACTATCAGGATGATACCGAGGAGC..........2411.0010100
.............................................................................................................................................................................................................................................................AAGAACTATCAGGATGATACCGAGG.............2511.0010100
...............................................................................................................................................................................................................................................AGCTGGAGCACCGAAAGA..................................1811.0010010
...............................................................................................................................................................................................................................................AGCTGGAGCACCGAAAGAACTATCAG..........................2611.0010010
................................................................................................................................................................................................................................................................AACTATCAGGATGATACCGAGGAG...........2411.0010010
................................................................................................................................................................................................................................................................AACTATCAGGATGATACCGAGG.............2211.0010010
........................................................................................................................................................................................................................................................ACCGAAAGAACTATCAGGATGATACC.................2611.0010010
..................................................................................................................................................................................................................................................................CTATCAGGATGATACCGAGGAGC..........2311.0010001
..............................................................................................................................................................................................................................................................AGAACTATCAGGATGATACCGAGGAGC..........2711.0010100
...............................................................................................................................................................................................................................................................................ACCGAGGAGCGTTTCCGCCT2011.0010010
............................................................................................................................................................................................................................................................................GATACCGAGGAGCGTTTCC....1911.0010001
.......................................................................................................................................................................................................................................................................AGGATGATACCGAGGAGC..........1811.0010100
..........................................................................................................................................................................................................................................................................ATGATACCGAGGAGCGTTTCC....2111.0010100
droYak3
G-------T----A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTTTTGTTACTGCAGCTGGAGCACCGCAAGAACTATCAGGATGATACCGAGGAGCGTTTCCGCCTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................................................................................................................................................................................................................................................................ATCAGGATGATACCGAGGAGC..........2115.00500000050000
...............................................................................................................................................................................................................................................................GAACTATCAGGATGATACCGAGGAGC..........2614.00400000040000
............................................................................................................................................................................................................................................................................GATACCGAGGAGCGTTTCCGCCT2313.00300000030000
.............................................................................................................................................................................................................................................................................ATACCGAGGAGCGTTTCCGCCT2213.00300000030000
......................................................................................................................................................................................................................................................................CAGGATGATACCGAGGAGC..........1913.00300000030000
.............................................................................................................................................................................................................................................................AAGAACTATCAGGATGATACCGAGGAGC..........2813.00300000030000
...............................................................................................................................................................................................................................................................GAACTATCAGGATGATACCGAG..............2212.00201000010000
..............................................................................................................................................................................................................................................................................TACCGAGGAGCGTTTCCGCCT2112.00200000020000
..........................................................................................................................................................................................................................................................CGCAAGAACTATCAGGATGATACCGAGG.............2812.00220000000000
..................................................................................................................................................................................................................................................................CTATCAGGATGATACCGAGGAGC..........2312.00200000020000
........................................................................................................................................................................................................................................................................GGATGATACCGAGGAGCGTTTCCGCCT2712.00200000020000
..........................................................................................................................................................................................................................................................................ATGATACCGAGGAGCGTTTCCGCCT2512.00200000020000
......................................................................................................................................................................................................................................................................CAGGATGATACCGAGGAGCGTTTCCGCCT2911.00100000010000
................................................................................................................................................................................................................................................................AACTATCAGGATGATACCGAGGAGC..........2511.00100000010000
.................................................................................................................................................................................................................................................................ACTATCAGGATGATACCGAGGA............2211.00101000000000
....................................................................................................................................................................................................................................................................ATCAGGATGATACCGAGGAGCGTTT......2511.00101000000000
..........................................................................................................................................................................................................................................................................ATGATACCGAGGAGCGTTTCCGC..2311.00100000010000
...................................................................................................................................................................................................................................................GGAGCACCGCAAGAACTAT.............................1911.00100000100000
..............................................................................................................................................................................................................................................................AGAACTATCAGGATGATACCGA...............2211.00100000010000
...............................................................................................................................................................................................................................................................GAACTATCAGGATGATACCGA...............2111.00100000010000
....................................................................................................................................................................................................................................................................ATCAGGATGATACCGAGGA............1911.00101000000000
........................................................................................................................................................................................................................................................................GGATGATACCGAGGAGCGTTT......2111.00100000010000
......................................................................................................................................................................................................................................................................CAGGATGATACCGAGGAGCGTTTCC....2511.00100100000000
..............................................................................................................................................................................................................................................................AGAACTATCAGGATGATACCGAGG.............2411.00100000010000
.......................................................................................................................................................................................................................................................................AGGATGATACCGAGGAGCGTTTCC....2411.00101000000000
...............................................................................................................................................................................................................................................AGCTGGAGCACCGCAAGAAC................................2011.00100000010000
............................................................................................................................................................................................................................................................................GATACCGAGGAGCGTTTCC....1911.00100000010000
droEre2
TGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------G-------------------------------------------------------CTATTTTTCTTTATGCAGCTGGAGCACCGCAAGAACTATCAGGATGATACCGAGGAGCGTTTCCGCCTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................................................................................................................................................................................................................................................................GATACCGAGGAGCGTTTCCGCCT2316.0060000420
....................................................................................................................................................................................................................................................................ATCAGGATGATACCGAGGAGC..........2115.0052000210
......................................................................................................................................................................................................................................................................CAGGATGATACCGAGGAGC..........1915.0050000320
...............................................................................................................................................................................................................................................................GAACTATCAGGATGATACCGAGGAGC..........2614.0041000300
.................................................................................................................................................................................................................................................................ACTATCAGGATGATACCGAGGAGC..........2414.0041000120
...............................................................................................................................................................................................................................................................GAACTATCAGGATGATACCGA...............2112.0020000110
..................................................................................................................................................................................................................................................................CTATCAGGATGATACCGAGGAGC..........2312.0021000100
.................................................................................................................................................................................................................................................................ACTATCAGGATGATACCGA...............1912.0020000200
..............................................................................................................................................................................................................................................................AGAACTATCAGGATGATACCGAGGAGC..........2712.0021000100
............................................................................................................................................................................................................................................................CAAGAACTATCAGGATGAT....................1912.0022000000
..............................................................................................................................................................................................................................................................................TACCGAGGAGCGTTTCCGCCT2111.0010001000
............................................................................................................................................................................................................................................................CAAGAACTATCAGGATGATACCGAG..............2511.0010000100
................................................................................................................................................................................................................................................................AACTATCAGGATGATACCGAGGAGC..........2511.0010000100
..................................................................................................................................................................................................................................................TGGAGCACCGCAAGAACTATCAGGATGA.....................2811.0011000000
...................................................................................................................................................................................................................................................................TATCAGGATGATACCGAGG.............1911.0011000000
.........................................................................................................................................................................................................................................................................GATGATACCGAGGAGCGTTTCCGCCT2611.0010000100
.............................................................................................................................................................................................................................................................................ATACCGAGGAGCGTTTCCGC..2011.0010000100
...................................................................................................................................................................................................................................................................TATCAGGATGATACCGAGGAGC..........2211.0010000010
................................................................................................................................................................................................................................................................AACTATCAGGATGATACCGAGGA............2311.0011000000
............................................................................................................................................................................................................................................................................GATACCGAGGAGCGTTTCCGC..2111.0010000100
....................................................................................................................................................................................................................................................................ATCAGGATGATACCGAGGAGCGTTTC.....2611.0010000100
..........................................................................................................................................................................................................................................................CGCAAGAACTATCAGGATGA.....................2011.0010000100
.............................................................................................................................................................................................................................................................AAGAACTATCAGGATGATACCGAGG.............2511.0010000100
..........................................................................................................................................................................................................................................................................ATGATACCGAGGAGCGTTTCC....2111.0010000100
.............................................................................................................................................................................................................................................................................ATACCGAGGAGCGTTTCCGCCT2211.0010000100
.................................................................................................................................................................................................................................................................ACTATCAGGATGATACCGAGG.............2111.0011000000
.............................................................................................................................................................................................................................................................AAGAACTATCAGGATGATACCGAGGAGC..........2811.0010000100
....................................................................................................................................................................................................................................................................ATCAGGATGATACCGAGGAG...........2011.0010000010
................................................................................................................................................................................................................................................................AACTATCAGGATGATACCGAGG.............2211.0011000000
..............................................................................................................................................................................................................................................................AGAACTATCAGGATGATACC.................2011.0011000000
...............................................................................................................................................................................................................................................................................ACCGAGGAGCGTTTCCGCC.1911.0011000000
.............................................................................................................................................................................................................................................................AAGAACTATCAGGATGATACCGAGGA............2611.0010000100
........................................................................................................................................................................................................................................................................GGATGATACCGAGGAGCGTTTCCG...2411.0010000100
..................................................................................................................................................................................................................................................................CTATCAGGATGATACCGAGGA............2111.0010000100
...............................................................................................................................................................................................................................................................GAACTATCAGGATGATGT..................1840.2510000010

Generated: 05/17/2015 at 04:29 AM