ID:

dvi_5158

 Coordinate:

scaffold_12875:4109040-4109190 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-16.7 -16.7 -16.6

Flybase annnotation

CDS [Dvir\GJ21414-cds]; exon [dvir_GLEANR_6771:7]; intron [Dvir\GJ21414-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------#######################---------------------------
CAGAGTTTTGTTTTTACTTTTAGCCCTCAACGCAAGTACGTTGAGCATATGCATACATACCATAGAAATCGGACAACAACAACTACATGAAAACATCAACAACAACAACTTTTGAGGCGGCCCGAAGAAAGCATTTCGCTAACATTTGTCTTAGTGTTTTCTCCCAATAATATTGTTGTACATCTTTTTTACTTCCCACAGCTGGAGTATGGAGAAGTGCCTAGAGCAGAGAGAGAGCGAGAGAGAGAAAG
**************************************************............((((((....(((((((.........((((((((................((((((((..(((((......))))).......))))))))))))))))...........)))))))......))))))..........************************************************** 		Read size # Mismatch Hit Count Total Norm Total V116
male body		 V047
embryo
 M047
female body
 SRR060655
9x160_testes_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060667
160_females_carcasses_total
 SRR060670
9_testes_total
 SRR060674
9x140_ovaries_total
 SRR060675
140x9_ovaries_total
 SRR060676
9xArg_ovaries_total
 SRR060677
Argx9_ovaries_total
 SRR060678
9x140_testes_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060687
9_0-2h_embryos_total
 M027
male body		 SRR060666
160_males_carcasses_total
 SRR060679
140x9_testes_total
 SRR060689
160x9_testes_total
.............................................................................................................................................................................................TACTTCCCACAGCTGGAGTATGGAGA.................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................GGAGAAGTGCCTAGAGCAGAGAGAGA............... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................TACAGCTCTTTTACTTCCCA..................................................... 20 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................TGTCTTAGTGTTTTCTCCCAAT................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................TACATCTGTCTTAGTGATTTC.......................................................................................... 21 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TGCCTAGAGCAGAGAGAGAGCGAGAG........ 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
................................................................................................................................................................................................TTCCCACAGCTGGCGTATG........................................ 19 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................CAGCTGGAGTATGGAGAAGTGCCTAGA.......................... 27 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................CCGAAGAAAGCATTTCGCTAACATT......................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................GAAGTGCCTAGAGCAGAGAGAGA............... 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................TTCCCACAGCTGGAGTATGGA...................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..............................................ATATGCATACATACCATAGAAATCGGA.................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................GCCTAGAGCAGAGAGAGAGC............. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................GTTGTACATCTTTTTTACTTCCCACAGCT................................................ 29 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................GTATGGAGAAGTGCCTAGAGCAGA..................... 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................ATAAATCGGATAACAACATCTA...................................................................................................................................................................... 22 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..................................................................................................................................................................................................................GGTGAAGTGCCTCGAGCAG...................... 19 2 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TGTCTTGGTCTTTTCTCC....................................................................................... 18 2 9 0.11 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................CATCACCAACAGCAACTTT........................................................................................................................................... 19 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.................................................................................................................................................TTGTGTTTGTGTTTTCTCC....................................................................................... 19 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.................................ACGTACCTTGAGCATATGCT...................................................................................................................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0

Anti-sense strand reads

GTCTCAAAACAAAAATGAAAATCGGGAGTTGCGTTCATGCAACTCGTATACGTATGTATGGTATCTTTAGCCTGTTGTTGTTGATGTACTTTTGTAGTTGTTGTTGTTGAAAACTCCGCCGGGCTTCTTTCGTAAAGCGATTGTAAACAGAATCACAAAAGAGGGTTATTATAACAACATGTAGAAAAAATGAAGGGTGTCGACCTCATACCTCTTCACGGATCTCGTCTCTCTCTCGCTCTCTCTCTTTC
**************************************************............((((((....(((((((.........((((((((................((((((((..(((((......))))).......))))))))))))))))...........)))))))......))))))..........************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060684
140x9_0-2h_embryos_total
 M061
embryo
 SRR060662
9x160_0-2h_embryos_total
 SRR060679
140x9_testes_total
 SRR060672
9x160_females_carcasses_total
 SRR060663
160_0-2h_embryos_total
 SRR060667
160_females_carcasses_total
 M028
head
 SRR060682
9x140_0-2h_embryos_total
.....................................................................GACTGTTGTTGTTGACGTACT................................................................................................................................................................. 21 2 4 0.25 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................TGGAAACAGAATGACAAAA........................................................................................... 19 2 5 0.20 1 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................TTACAACAACATGAAGAAAAAATA........................................................... 24 3 8 0.13 1 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................GGTCTTAACCTCATACCTC..................................... 19 3 11 0.09 1 0 0 0 1 0 0 0 0 0
..................................................................................................................................................................................................................CCTCTTCACGGACCTCGCCC..................... 20 3 14 0.07 1 0 0 0 0 1 0 0 0 0
..................................................................................................................................................................................CTGGAGATAAAATGAAGGG...................................................... 19 3 16 0.06 1 0 0 0 0 0 1 0 0 0
...........................................................................................................................................ATTGTTAACAGAATCACTAC............................................................................................ 20 3 19 0.05 1 0 0 0 0 0 0 1 0 0
..................................................................................................................................................................................................................................GACTCTCTCTCGCTCGCTCTATT.. 23 3 20 0.05 1 0 0 0 0 0 0 0 0 1
..........................................................................................................................................GATTGTCAGGAGAATCACA.............................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 1 0
........................................................................................................................................................TCAGAAATGCGGGTTATTA................................................................................ 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12875:4108990-4109240 + dvi_5158 C-----AGA------------------------GTTTTGTTTT-TAC-TTTTAGCCCTCAACG-CAAGTACG----------------TTGAGC----------ATAT------------------GCATA------------------CATACCATAGAAATCGGACAACAACAAC-------------TAC--------AT-------------------------------------GAA-AACATCA----------------------------------------ACA------ACAACA----ACTTTTGAGGCGGCCC-G-AAGAAAGCAT-TTCGCT-AACAT-TTGTCTTAGTGTTTTCT--CCCAATAATAT--TGTT-----GTACAT----CTTT-TTTACTTC-CCACAGCTGGAGTA-TG--GAGAAGTGCCTAGAG----CAGAGAGAGAGCGA----------------GAGAGAGAA-AG-
droMoj3 scaffold_6496:20940029-20940277 - C-----AGA------------------------GTTTTGTTTT-TACTTTTAGTC-TACAACGCCAAGT---------------------------GCGTT---G--------------------GGCATATA----------------CATACCATAGAAAACGGACAACAACAAC------------------AACAACAA--------------------------------------------------------------------------------------------------GAACA----ACATTTAGAGCGGCTT-G-AAGAAAACAA-TTCGCT-AATATTTTGTCTTAAGGTTTTCTT-CCCAATAATAT-TTGTT-----GTACAT----CTTT-TTTACTTC-CTACAGCTGGT--A-TT--AAGGAGTGACTAGAG-TACGGATGAAGTAAAGA--------GTGTGTAAGAAGGAGAG-AG-
droGri2 scaffold_15112:2111421-2111697 - C-----AGA------------------------GTTTTGTTTTTAAG-TTTAATCCTTAAGCG-CAAAG---------------------------GCGTC---GAAACAT----------ACTT-A----------------------CATACCATAGATAACCGACAACAACAACAACAGCAACAAACAAC-ATACAACAT-------------------------------GACTACGAA-AACAACAACAACAA-----------------AAACAAGAA-----------------------------GAA-GAACGGCCA-G-AAGAAAGCAT-TTCGCT-AACAT-TTGTCTTAATGTTTTCCTACCCAATAATAT--TGTT-----GTACAT----CTTT-TTTACTTC-CCACAGCTGGT--AATG--GCGGAGCGCGCCTGT----CGGAGAATGA--------------------GAGAGAGAA-TA-
droWil2 scf2_1100000004514:1657141-1657460 - dwi_991 C-----AAC------------------------ATTATGTTT--AAC-ATTTTTCTTTACA---AAAAAAC-----------------------------------------------AA-AAA--A-------------------CAA------------------------AACAAAAAAAACCATATAAC-ATGCAACATGCAACAATGAGAACATGGCAAACTCACATATGAATGAGAT-AGCAACAACAACAACAACTTTAACTTGAATGAAACAAGATGAAGATGAAGA---CTTAATCAAC-AATTTTTGGAGCGCCACAACAAAAAAGCAT-TTCGCTTAAAATAATGTCTTA---------------ATAATAC--TGTT-----GTAAAT----CTTT-TTTACTTCCCCACAGCTGGT----ATGCGAGGAGTGCATAGAG-AA-GAAAGAGTTATAGA--------TATTGA--GTGAGTGAAGAA-
dp5 3:12680392-12680644 - C-----AGA------------------------GTTATGTTG--AAC-ATTATTCATTCAACG-AACTGACGCTAACGTTCCGTTCCGATACCCAATTGTA---AAATGAA------CAC-AAT--GCATATAGAAATCA-ACAGA-------------------------------------------TTAC-TTGCGACA-------------------------------------------TCATCA------TCC---------------------------------GA---TTTCAGCC----ACTTTT-TAGCGACAGA----GAACG-AT-TTCGCT-AGCA---TGTCCAA---------------ATAATAATATGTT-----GTACATCTATCTTT-TTTACTTCCCCACAGCTGGT----TT--GAGGAGTGCGTAGAG----G---------TGGAGAAG----------GAGTC----AG-CG-
droPer2 scaffold_2:8902994-8903246 + C-----AGA------------------------GTTATGTTG--AAC-ATTATTCATTCAACG-AACTGACGCTAACGTTCCGTTCCGATACCCAATTGTA---AAATGAA------CAC-AAT--GCATATAGAAATCA-ACAGA-------------------------------------------TTAC-TTGCGACA-------------------------------------------TCATCA------TCC---------------------------------GA---TTTCAGCC----ACTTTT-TAGCGACAGA----GAACG-AT-TTCGCT-AGCA---TGTCCAA---------------ATAATAATATGTT-----GTACATCTATCTTT-TTTACTTCCCCACAGCTGGT----TT--GAGGAGTGCGTAGAG----G---------TGGAGAAG----------GAGTC----AG-CG-
droAna3 scaffold_13266:9727281-9727525 + dan_1903 TTTAAAGAA------------------------GTTATTTTA--ACC-ATTCTT---TA----------------------------------CAATTGTC---TAATGAAAAACCAAACAAATCCGCATATGGACATTA-AGAATCTT-------------------------------------------CATCAAAAAAA-------------------------------------GGA--ACAAAA----------------------------------------AAAC---CTTAAGCC----ACCGTT-CAGCGGCAGA----GAAAGCATTTTCTCT-ACAAT-TTGTCTTA---------------ATAATAT--TGTT-----GTACAT----CTTT-TTTACTTCCCCACAGCTGGT----TT--GAGGAGTGCGTAGAA----GATGAAGG--TGGAGTAATAGAT---------CAGATAC-GG-
droBip1 scf7180000396427:870256-870487 + A-----GAA------------------------GTTATTTTA--ATC-ATT---CTTTA----------------------------------CAATTGTC---TAACGAAAAAAAATAC-A----------AAACATTA-AGAATCTT-------------------------------------------CATTCAAACAA-------------------------------------AAA-AAAAAGG--------------------------------A--GAAACAACA---CATGAGCCACCGTTCAGC-CAGCGGCAGA----GAAAGCAT-TTCTCTCAAAAT-TTATCTTA---------------ATAATATTTTGTT-----GTACAT----CTTT-TTTACTTCCCCAGAGCTGGT----TT--GAGGAGTTCATAGAA----GTTGAAGATGAGGA--------------------GAAG--GA-
droKik1 scf7180000302679:93385-93608 - A-----AAA------------------------GTTATGTTA--CA---------------TA-AACTAACA----------------TTGCCGAATCGTC---AAATTAA----------ATTTTGCATACGGACATCA-AGAATCGC-------------------------------------------GACTAAGACA-------------------------------------------ACATCA-----------------------------------------TA----------TA----ACCTTT-CAGCCGCAGAG-ACGACAACAC-TTGTCT-AAAAT-TTGTCTTA---------------ATAATCT--TGTT-----GTACAT----CTTTTTTTACCTTCCCACAGCTGGT----TT--GAGGAGTGCGTAGAAGAA-GAGAGATGTGTGGA--------AT----------GTGGATGA-
droFic1 scf7180000454039:850875-851119 - T-----TAA------------------------ATTATGTTA--AAC-ATTATTCTTTTAACA-AACGTACT----------------TTGCCC----------AAGTTAA----------AATTGGCACTCGGACATCA-ACAATCGC-------------------------------------------CGCTTTGAGAA-------------------------------------GAA-AACATCA-----------------------------------------TGA---CATGAGCG----GCCTTT-TAGCGGCAGA----GAAAGCAT-TTCTCT-AACAT-TTGTCCTA---------------ATAATAT--TGTT-----GTACAT----CTTT-TTTACTTCCCCACAGCTGGT----TT--GAGGAGTGCGTAGAA----GAGAGAAGTGTGGA--------GAGGATGAGGATGAGGA-GG-
droEle1 scf7180000491201:2018029-2018266 - C-----ATA------------------------GTTATGTTA--AAC-ATTATTCTTTCAACA--------A----------------TTGCCTAATCGTC---AAATTAA----------AATTGGCATTCGGACATCA-ACAATCGG-------------------------------------------CGCTAAGACAA-------------------------------------GAACAACACCA-----------------------------------------TGA---CTTGAGCG----GCCTTT-TAGTGGCAGA----GAAAGCAT-TTCTCT-AACAT-TTGTCTTA---------------ATAATAT--TGTT-----GTACAT----CTTT-TTTACTTCCCCACAGCTGGT----TT--GAGGAGTGCGTAGAA----GAGAGAAGTGTGGA--------GAG---------TGGAA-AGT
droRho1 scf7180000780066:69030-69279 + C--------------------------TATAAAGTTATGTTA--AAC-ATTATTCTTTCAACA-AACAAACA----------------TCGCCTAATCGCCTAAAAATTAA----------AATTGGCATTCGGACATTA-ACAAACGG-------------------------------------------CGCTAAGACAA-------------------------------------GAAAAACACCA-----------------------------------------TAA---CTTAAGCG----ACCTTT-TAGCGGCAGA----GAAAGCAC-TTCTCT-AACAT-TTGTCTTA---------------ATAATAT--TGTT-----GTACAT----CTTT-TTTACTTCCCCACAGCTGGT----TT--GAGGAGTGCGTAGAA----GAGAGATGTGTGGA--------GAG---------TGGAA-AG-
droBia1 scf7180000302143:3063692-3063928 - C-----AAA------------------------GTTATGTTA--AAC-ATTATTCTTTCATCA-AACTAACA----------------TTGGCTAATCGTC---AAGCTTG----------AATTGGCATTCGGAGATCA-ACAATCGC-------------------------------------------CGCTAAGACAA-------------------------------------GAA-AACATCA----------------------------------------AAGA---CTTGCTCG----ACCCTAGTAGCGGCAGA----GAAATCAT-TTCTCC-AACAT-TTGTCTTA---------------ATAATAT--TGTT-----GTACAT----CTTT-TTTACTTCCCCACAGCTGGA----TT--GAGGAGTGCGTAGAA----GAAAGATGTG-------------------------AGGA-GG-
droTak1 scf7180000415384:80311-80551 + C-----AAA------------------------GTTATGTTA--AAC-ATTATTCTTTCAACA-ACCTAACA----------------TCGCCCAATCGTC---AAATTGA----------AATTGGCATTCGAAGATCA-ACAATCGC-------------------------------------------CGCTTTGATAA-------------------------------------GAA-AACATCA----------------------------------------AAGA---CTTGGGCG----ACCTAT-TAGCGGAAGA----GAAAGCAT-TTCTCT-AAAAT-TTGTCTTA---------------ATAATAT--TGTT-----GTACAT----CTTT-TTTACTTCCCCACAGCTGGT----TT--GAGGAGTGCGTAGAA----GAGAGAAGTGTGGA--------------------GAGGA-TG-
droEug1 scf7180000409474:2393895-2394120 + C-----AAA------------------------GTTATGTTA--AAC-ATTATTCTTTCAACC-AACTAACA----------------TCGCCCAATCGTC---AAACTAA----------AATTGGCATTCGGGGATCGGAGAAACGC-------------------------------------------CTTTAAGACAA-------------------------------------GAAAGTCATCT-----------------------------------------TGAGAGCTT----------------GAGCGGCAGA----GAAAGCAT-TTCTCT-AACTT-TTGTCTTA---------------ATAATAT--TGTTGTATTGTACAT----CTTT-TTTACTTCCCCACAGCTGGT----TT--GAGGAGTGCGTAGAA----GAGAGA----------------------------------GA-
dm3 chr2R:15551726-15551971 - C--------------------------TACAAACATGTGTTA--AAC-ATTATTCGTTCAACC-AATTAACA----------------TCGCCCTATCGTC---AAATCGA----------AATTGGCATTCGGAGATCA-ACAATCGC-------------------------------------------CGTTAAGACAA-------------------------------------GAA-AACATCA-----------------------------------------TGA---CTTGAGGC---GA-TTTT-TAGCGGCAGA----GAAAGCAT-TTCTCT-AACAT-TTGTCTTA---------------ATAATAT--TGTT-----GTACAT----CTTT-TTTACTTCCCCACAGCTGGT----TT--GAGGAGTGCGTAGAA----GAGAGAAGTGTGGA--------GAG---------GAGGA-TG-
droSim2 2r:16198987-16199251 - C-----AGGTTTCTATCATACACCTTCTACAAACATGTGTTA--AAC-ATTATTCGTTCAACC-AACTAACA----------------TCGCCCTATCGTC---AAATTGA----------AATTGGCATTCGGAGATCA-ACAATCGC-------------------------------------------CGTTAAGACAA-------------------------------------GAA-AACATCA-----------------------------------------TGA---CTTGAGGC---GTTTTTT-TAGCGGCAGA----GAAAGCAT-TTCTCT-AACAT-TTGTCTTA---------------ATAATAT--TGTT-----GTACAT----CTTT-TTTACTTCCCCACAGCTGGT----TT--GAGGAGTGCGTAGAA----GAGAGAAGTGTGGA--------------------GAGGA-GG-
droSec2 scaffold_1:13066461-13066722 - C-----AGGTTTCTATCATACACCTTATACAAACATGTGTTA--AAC-ATTATTAGTTCAACC-AACTAACA----------------TCGCCCTATCGCC---AAATTGA----------AATTGGCATTCGGAGATCA-ACAAACGT-------------------------------------------CGTTAAGACAA-------------------------------------GAA-AACATCA-----------------------------------------TGA---CTTGAGGC---GATTTTT-TAGCGGCAGA----GAAAGCAT-TTCTCT-AACAT-TTGTCTTA---------------ATAATAT--TGTT-----GTACAT----CTTT-TTTACTTCCCCACAGCTGGT----TT--GAGGAGTGCGTAGAA----GAGAGAAGTGTGGA--------------------GA----GG-
droYak3 2R:13620833-13621089 + C-----AGGTTTCTATCATACACCTTCTACAAACATGTGTTA--AAC-ATTATTCGTTCAACC-AACTAACA----------------TCGCCCAATCG-----------A----------AATTGGCATTCGAAGATCA-ACTATCGC-------------------------------------------CGCTAAGACAA-------------------------------------GAA-AACATCA-----------------------------------------TGA---TTTGAGGC---GATTTTT-TAGCGGCAGA----GAAAGCAT-TTCTCT-AACAT-TTGTCTTA---------------ATAATAT--TGTT-----GTACAT----CTTT-TTTACTTCCCCACAGCTGGT----TT--GAGGAGTGCGTAGAA----GAGAGAAGTGTGGA--------------------GAGGA-GG-
droEre2 scaffold_4845:9751962-9752224 - C-----AGGTTTCTATCATACACCTTCTACAAACATGTGTTA--AAC-ATTATTCGTTCTACC-AACTAACA-----------------CGCCC-ATCGTC---AAATCGA----------AATTGGCATTCGGAGATCA-ACAATCGC-------------------------------------------CGTTAAGACAA-------------------------------------GAA-AACATCA-----------------------------------------TGA---CTAGAGGC---GATTTTT-TAGCGGCAGA----GAAAGCAT-TTCTCT-AACAT-TTGTCTTA---------------ATAATAT--TGTT-----GTACAT----CTTT-TTTACTTCCCCACAGCTGGT----TT--GAGGAGTGCGTAGAA----GAGAGAAGTGTGGA--------------------GAGGA-GG-

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
C-----AGA------------------------GTTTTGTTTT-TAC-TTTTAGCCCTCAACG-CAAGTACG----------------TTGAGC----------ATAT------------------GCATA------------------CATACCATAGAAATCGGACAACAACAAC-------------TAC--------AT-------------------------------------GAA-AACATCA----------------------------------------ACA------ACAACA----ACTTTTGAGGCGGCCC-G-AAGAAAGCAT-TTCGCT-AACAT-TTGTCTTAGTGTTTTCT--CCCAATAATAT--TGTT-----GTACAT----CTTT-TTTACTTC-CCACAGCTGGAGTA-TG--GAGAAGTGCCTAGAG----CAGAGAGAGAGCGA----------------GAGAGAGAA-AG-SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................TACTTC-CCACAGCTGGAGTA-TG--GAGA..........................................................2611.001000000000000000000000000000100000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................G--GAGAAGTGCCTAGAG----CAGAGAGAGA.................................2611.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................TGTCTTAGTGTTTTCT--CCCAAT.........................................................................................................................2211.001000000000000000000000000001000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCTAGAG----CAGAGAGAGAGCGA----------------GAG..........2611.001000000000000000000000000000000000000010000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTGGAGTA-TG--GAGAAGTGCCTAGA................................................2711.001000000000000000000000000100000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................CC-G-AAGAAAGCAT-TTCGCT-AACAT-T.................................................................................................................................................2511.001000000000000000000000000010000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGTGCCTAGAG----CAGAGAGAGA.................................2311.001000001000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TTC-CCACAGCTGGAGTA-TG--GA............................................................2111.001000000000000000000000000000000001000000000000000000000000000000
........................................................................................................ATAT------------------GCATA------------------CATACCATAGAAATCGGA............................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTAGAG----CAGAGAGAGAGC...............................2011.001000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................................................................................................................................................................................................................................................................................................GTT-----GTACAT----CTTT-TTTACTTC-CCACAGCT.........................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................GTA-TG--GAGAAGTGCCTAGAG----CAGA.......................................2411.001000000000001000000000000000000000000000000000000000000000000000
droMoj3
C-----AGA------------------------GTTTTGTTTT-TACTTTTAGTC-TACAACGCCAAGT---------------------------GCGTT---G--------------------GGCATATA----------------CATACCATAGAAAACGGACAACAACAAC------------------AACAACAA--------------------------------------------------------------------------------------------------GAACA----ACATTTAGAGCGGCTT-G-AAGAAAACAA-TTCGCT-AATATTTTGTCTTAAGGTTTTCTT-CCCAATAATAT-TTGTT-----GTACAT----CTTT-TTTACTTC-CTACAGCTGGT--A-TT--AAGGAGTGACTAGAG-TACGGATGAAGTAAAGA--------GTGTGTAAGAAGGAGAG-AG-SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......................................................................................................................................................................................................AACAA--------------------------------------------------------------------------------------------------GAACA----ACATTTAGAGC..................................................................................................................................................................................2111.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGACTAGAG-TACGGATG......................................1811.001000001
.............................................................................................................................................................................................................................................................................................................................................................................TTTCTT-CCCAATAATAT-TTGTT-----.........................................................................................................2211.001100000
..............................................................................................................................................................................................................................................................................................................................................AACAA-TTCGCT-AATATTTTGTCTTAA.........................................................................................................................................2611.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................GGT--A-TT--AAGGAGTGACTAGA................................................2011.001100000
..................................................................................................................................................................................................................................................................................................................................................A-TTCGCT-AATATTTTGTCTTAAGGT......................................................................................................................................2511.001100000
.......................................................................................................................................................................................................................................................................................................................CATTTAGAGCGGCTT-G-AAGA......................................................................................................................................................................2011.001100000
.................................................TTAGTC-TACAACGCCAAGT---------------------------GCGTT---...........................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
...................................................................................................................................................................................................AACAACAA--------------------------------------------------------------------------------------------------GAACA----ACATTT.......................................................................................................................................................................................1911.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................GTACAT----CTTT-TTTACTTC-CTACAGCTGGT--....................................................................2911.001100000
...............................................................................................................................................................................................................................................................................................................................................ACAA-TTCGCT-AATATTTTGT..............................................................................................................................................2011.001000001
droGri2
C-----AGA------------------------GTTTTGTTTTTAAG-TTTAATCCTTAAGCG-CAAAG---------------------------GCGTC---GAAACAT----------ACTT-A----------------------CATACCATAGATAACCGACAACAACAACAACAGCAACAAACAAC-ATACAACAT-------------------------------GACTACGAA-AACAACAACAACAA-----------------AAACAAGAA-----------------------------GAA-GAACGGCCA-G-AAGAAAGCAT-TTCGCT-AACAT-TTGTCTTAATGTTTTCCTACCCAATAATAT--TGTT-----GTACAT----CTTT-TTTACTTC-CCACAGCTGGT--AATG--GCGGAGCGCGCCTGT----CGGAGAATGA--------------------GAGAGAGAA-TA-SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
............................................................GCG-CAAAG---------------------------GCGTC---GAAACA.....................................................................................................................................................................................................................................................................................................................................................................................................1911.00110
..........................................................................................................................................................................................................................................................................................................................................................................................................................TTACTTC-CCACAGCTGGT--AATG--GCGGA.........................................................2720.50101
droWil2
C-----AAC------------------------ATTATGTTT--AAC-ATTTTTCTTTACA---AAAAAAC-----------------------------------------------AA-AAA--A-------------------CAA------------------------AACAAAAAAAACCATATAAC-ATGCAACATGCAACAATGAGAACATGGCAAACTCACATATGAATGAGAT-AGCAACAACAACAACAACTTTAACTTGAATGAAACAAGATGAAGATGAAGA---CTTAATCAAC-AATTTTTGGAGCGCCACAACAAAAAAGCAT-TTCGCTTAAAATAATGTCTTA---------------ATAATAC--TGTT-----GTAAAT----CTTT-TTTACTTCCCCACAGCTGGT----ATGCGAGGAGTGCATAGAG-AA-GAAAGAGTTATAGA--------TATTGA--GTGAGTGAAGAA-SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............................................................................................................................................................................................................................................................................TGAATGAAACAAGATGAAGATGAAGA---CT.......................................................................................................................................................................................................2815.00550000
...............................................................................................................................................................................................................................................................................................................................................................................................................T----CTTT-TTTACTTCCCCACAGCTGGT----A.................................................................2613.00301020
........................................................................................................................................................................................................................................................................TAACTTGAATGAAACAAGATGAAGATG................................................................................................................................................................................................................2711.00100010
..............................................................................................................................................................................................AAC-ATGCAACATGCAACAATGAGAACA.........................................................................................................................................................................................................................................................................................2711.00100010
.........................................................................................................................................................................................................................................................................AACTTGAATGAAACAAGATGAAGATGA...............................................................................................................................................................................................................2711.00100010
.............................................................................................................................................................................................................................................TGAGAT-AGCAACAACAACAACAACTTT..........................................................................................................................................................................................................................................2711.00100001
...........................................................................................................................................................................................................................................................................................TGAAGATGAAGA---CTTAATCAAC-AATTTT........................................................................................................................................................................................2811.00101000
....................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCTGGT----ATGCGAGGAGTGC.....................................................2211.00100100
....................................................................................................................................................................................................................................................................................................................................................................................................................CTTT-TTTACTTCCCCACAGCTGGT----..................................................................2411.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................CCCACAGCTGGT----ATGCGAGGAGTGC.....................................................2511.00100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTGCATAGAG-AA-GAAAG......................................1911.00100100
..........................................................................................................................................................................................................................................................................................................................................................................................................................TTACTTCCCCACAGCTGGT----ATGCGAGG..........................................................2711.00101000
...............................................................................................................................................................................................................................................................................................................................................................................................................T----CTTT-TTTACTTCCCCACAGCTGGT----AA................................................................2711.00101000
..........................................................................................................................................................................................................TGCAACAATGAGAACATGGCAAACTCACA............................................................................................................................................................................................................................................................................2911.00101000
............................................................................................................................................................................................................................................................................TTGAATGAAACAAGATGAAGATGAAGA---.........................................................................................................................................................................................................2711.00100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................TTTACTTCCCCACAGCTGGT----ATGCGAG...........................................................2711.00101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TTTACTTCCCCACAGCTGGT----ATGC..............................................................2411.00101000
..................................................................................................................................................................................................................TGAGAACATGGCAAACTCACATATGAAT.....................................................................................................................................................................................................................................................................2811.00101000
................................................................................................................................................................................................................................................................................ATGAAACAAGATGAAGATGAAGA---CTT......................................................................................................................................................................................................2611.00100100
................................................................................................................................................................................................................................................................................................................CAAC-AATTTTTGGAGCGCCACAACAAAA......................................................................................................................................................................2811.00101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGTTATAGA--------TATTGA--GTGAGT.......2411.00100010
......................................................................................................................................................................................................................................................................................................................................................CGCTTAAAATAATGTCTTA---------------AT.........................................................................................................................2111.00101000
.........................................................................................................................................................................................................................................................CAACAACAACAACTTTAACTTGAATGA...............................................................................................................................................................................................................................2711.00101000
............................................................................................................................................................................................ATAAC-ATGCAACATGCAACAATGAGAACA.........................................................................................................................................................................................................................................................................................2911.00101000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCATAGAG-AA-GAAAGAGTTATAGA--------.....................2511.00101000
............................................................................................................................................................................................................................................................................................................TAATCAAC-AATTTTTGGAGCGCCACAA...........................................................................................................................................................................2711.00101000
.............................................................................................................................................................................................TAAC-ATGCAACATGCAACAATGAGAAC..........................................................................................................................................................................................................................................................................................2711.00101000
...........................................................................................................................................................................................................................................................................................................................TGGAGCGCCACAACAAAAAAGCAT-T..............................................................................................................................................................2511.00101000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCGAGGAGTGCATAGAG-AA-GAAAGA.....................................2711.00100010
dp5
C-----AGA------------------------GTTATGTTG--AAC-ATTATTCATTCAACG-AACTGACGCTAACGTTCCGTTCCGATACCCAATTGTA---AAATGAA------CAC-AAT--GCATATAGAAATCA-ACAGA-------------------------------------------TTAC-TTGCGACA-------------------------------------------TCATCA------TCC---------------------------------GA---TTTCAGCC----ACTTTT-TAGCGACAGA----GAACG-AT-TTCGCT-AGCA---TGTCCAA---------------ATAATAATATGTT-----GTACATCTATCTTT-TTTACTTCCCCACAGCTGGT----TT--GAGGAGTGCGTAGAG----G---------TGGAGAAG----------GAGTC----AG-CG-SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................G--AAC-ATTATTCATTCAACG-AACTGACGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................TT--GAGGAGTGCGTAGAG----G---------TGGA.............................2211.0010000000001
........................................................TTCAACG-AACTGACGCTAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.....................................................................................................................................GAAATCA-ACAGA-------------------------------------------TTAC-TTGCGAC..........................................................................................................................................................................................................................................................................................................2311.0010100000000
...................................................................................................................................................................................................TGCGACA-------------------------------------------TCATCA------TCC---------------------------------GA---TT.......................................................................................................................................................................................................2011.0010000100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGTAGAG----G---------TGGAGAAG----------GAGTC----AG-C..2611.0010000001000
.................................................................................................................................................................................................................................................................................................................C----ACTTTT-TAGCGACAGA----GAACG-AT-T..............................................................................................................................................................2511.0010000000100
........................................TG--AAC-ATTATTCATTCAACG-AACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010000000
droPer2
C-----AGA------------------------GTTATGTTG--AAC-ATTATTCATTCAACG-AACTGACGCTAACGTTCCGTTCCGATACCCAATTGTA---AAATGAA------CAC-AAT--GCATATAGAAATCA-ACAGA-------------------------------------------TTAC-TTGCGACA-------------------------------------------TCATCA------TCC---------------------------------GA---TTTCAGCC----ACTTTT-TAGCGACAGA----GAACG-AT-TTCGCT-AGCA---TGTCCAA---------------ATAATAATATGTT-----GTACATCTATCTTT-TTTACTTCCCCACAGCTGGT----TT--GAGGAGTGCGTAGAG----G---------TGGAGAAG----------GAGTC----AG-CG-SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.................................................................................................................................................................................................................................................................................................................................GACAGA----GAACG-AT-TTCGCT-........................................................................................................................................................1911.001010000
...........................................................................................................................................................................................................................................................................................................................................GAACG-AT-TTCGCT-AGCA---TGTC.............................................................................................................................................2111.001001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTGGT----TT--GAGGAGTGCGTAGA................................................2411.001000001
....................................................................................................................................................................................................................................................................................................................................................TTCGCT-AGCA---TGTCCAA---------------AT.........................................................................................................................1911.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................GT----TT--GAGGAGTGCGTAGAG----G---------TGG..............................2311.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGTAGAG----G---------TGGAGAAG----------GA.............2111.001000001
droAna3
TTTAAAGAA------------------------GTTATTTTA--ACC-ATTCTT---TA----------------------------------CAATTGTC---TAATGAAAAACCAAACAAATCCGCATATGGACATTA-AGAATCTT-------------------------------------------CATCAAAAAAA-------------------------------------GGA--ACAAAA----------------------------------------AAAC---CTTAAGCC----ACCGTT-CAGCGGCAGA----GAAAGCATTTTCTCT-ACAAT-TTGTCTTA---------------ATAATAT--TGTT-----GTACAT----CTTT-TTTACTTCCCCACAGCTGGT----TT--GAGGAGTGCGTAGAA----GATGAAGG--TGGAGTAATAGAT---------CAGATAC-GG-SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAAGG--TGGAGTAATAGAT---------CA.........2312.002000002
..........................................................................................................................................................................................................................................................................................................CTTAAGCC----ACCGTT-CAGCGGCAGA----GA......................................................................................................................................................................2611.001000001
...............................................................................................ATTGTC---TAATGAAAAACC...............................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
....................................................................................................................................................................................................AAAAAAA-------------------------------------GGA--ACAAAA----------------------------------------AAAC---C........................................................................................................................................................................................................2111.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TTT-TTTACTTCCCCACAGCTGGT----T.................................................................2411.001100000
.....................................................................................................................................................................................................................................................ACAAAA----------------------------------------AAAC---CTTAAGCC----ACCGTT-CAGC..................................................................................................................................................................................2811.001010000
...................................................................................................................................................................................................CAAAAAAA-------------------------------------GGA--ACAAAA----------------------------------------A...............................................................................................................................................................................................................1850.201001000
droBip1
A-----GAA------------------------GTTATTTTA--ATC-ATT---CTTTA----------------------------------CAATTGTC---TAACGAAAAAAAATAC-A----------AAACATTA-AGAATCTT-------------------------------------------CATTCAAACAA-------------------------------------AAA-AAAAAGG--------------------------------A--GAAACAACA---CATGAGCCACCGTTCAGC-CAGCGGCAGA----GAAAGCAT-TTCTCTCAAAAT-TTATCTTA---------------ATAATATTTTGTT-----GTACAT----CTTT-TTTACTTCCCCAGAGCTGGT----TT--GAGGAGTTCATAGAA----GTTGAAGATGAGGA--------------------GAAG--GA-SizeHit CountTotal NormTotal
No Reads
droKik1
A-----AAA------------------------GTTATGTTA--CA---------------TA-AACTAACA----------------TTGCCGAATCGTC---AAATTAA----------ATTTTGCATACGGACATCA-AGAATCGC-------------------------------------------GACTAAGACA-------------------------------------------ACATCA-----------------------------------------TA----------TA----ACCTTT-CAGCCGCAGAG-ACGACAACAC-TTGTCT-AAAAT-TTGTCTTA---------------ATAATCT--TGTT-----GTACAT----CTTTTTTTACCTTCCCACAGCTGGT----TT--GAGGAGTGCGTAGAAGAA-GAGAGATGTGTGGA--------AT----------GTGGATGA-SizeHit CountTotal NormTotal
No Reads
droFic1
T-----TAA------------------------ATTATGTTA--AAC-ATTATTCTTTTAACA-AACGTACT----------------TTGCCC----------AAGTTAA----------AATTGGCACTCGGACATCA-ACAATCGC-------------------------------------------CGCTTTGAGAA-------------------------------------GAA-AACATCA-----------------------------------------TGA---CATGAGCG----GCCTTT-TAGCGGCAGA----GAAAGCAT-TTCTCT-AACAT-TTGTCCTA---------------ATAATAT--TGTT-----GTACAT----CTTT-TTTACTTCCCCACAGCTGGT----TT--GAGGAGTGCGTAGAA----GAGAGAAGTGTGGA--------GAGGATGAGGATGAGGA-GG-SizeHit CountTotal NormTotal
No Reads
droEle1
C-----ATA------------------------GTTATGTTA--AAC-ATTATTCTTTCAACA--------A----------------TTGCCTAATCGTC---AAATTAA----------AATTGGCATTCGGACATCA-ACAATCGG-------------------------------------------CGCTAAGACAA-------------------------------------GAACAACACCA-----------------------------------------TGA---CTTGAGCG----GCCTTT-TAGTGGCAGA----GAAAGCAT-TTCTCT-AACAT-TTGTCTTA---------------ATAATAT--TGTT-----GTACAT----CTTT-TTTACTTCCCCACAGCTGGT----TT--GAGGAGTGCGTAGAA----GAGAGAAGTGTGGA--------GAG---------TGGAA-AGTSizeHit CountTotal NormTotal
No Reads
droRho1
C--------------------------TATAAAGTTATGTTA--AAC-ATTATTCTTTCAACA-AACAAACA----------------TCGCCTAATCGCCTAAAAATTAA----------AATTGGCATTCGGACATTA-ACAAACGG-------------------------------------------CGCTAAGACAA-------------------------------------GAAAAACACCA-----------------------------------------TAA---CTTAAGCG----ACCTTT-TAGCGGCAGA----GAAAGCAC-TTCTCT-AACAT-TTGTCTTA---------------ATAATAT--TGTT-----GTACAT----CTTT-TTTACTTCCCCACAGCTGGT----TT--GAGGAGTGCGTAGAA----GAGAGATGTGTGGA--------GAG---------TGGAA-AG-SizeHit CountTotal NormTotal
No Reads
droBia1
C-----AAA------------------------GTTATGTTA--AAC-ATTATTCTTTCATCA-AACTAACA----------------TTGGCTAATCGTC---AAGCTTG----------AATTGGCATTCGGAGATCA-ACAATCGC-------------------------------------------CGCTAAGACAA-------------------------------------GAA-AACATCA----------------------------------------AAGA---CTTGCTCG----ACCCTAGTAGCGGCAGA----GAAATCAT-TTCTCC-AACAT-TTGTCTTA---------------ATAATAT--TGTT-----GTACAT----CTTT-TTTACTTCCCCACAGCTGGA----TT--GAGGAGTGCGTAGAA----GAAAGATGTG-------------------------AGGA-GG-SizeHit CountTotal NormTotal
No Reads
droTak1
C-----AAA------------------------GTTATGTTA--AAC-ATTATTCTTTCAACA-ACCTAACA----------------TCGCCCAATCGTC---AAATTGA----------AATTGGCATTCGAAGATCA-ACAATCGC-------------------------------------------CGCTTTGATAA-------------------------------------GAA-AACATCA----------------------------------------AAGA---CTTGGGCG----ACCTAT-TAGCGGAAGA----GAAAGCAT-TTCTCT-AAAAT-TTGTCTTA---------------ATAATAT--TGTT-----GTACAT----CTTT-TTTACTTCCCCACAGCTGGT----TT--GAGGAGTGCGTAGAA----GAGAGAAGTGTGGA--------------------GAGGA-TG-SizeHit CountTotal NormTotal
No Reads
droEug1
C-----AAA------------------------GTTATGTTA--AAC-ATTATTCTTTCAACC-AACTAACA----------------TCGCCCAATCGTC---AAACTAA----------AATTGGCATTCGGGGATCGGAGAAACGC-------------------------------------------CTTTAAGACAA-------------------------------------GAAAGTCATCT-----------------------------------------TGAGAGCTT----------------GAGCGGCAGA----GAAAGCAT-TTCTCT-AACTT-TTGTCTTA---------------ATAATAT--TGTTGTATTGTACAT----CTTT-TTTACTTCCCCACAGCTGGT----TT--GAGGAGTGCGTAGAA----GAGAGA----------------------------------GA-SizeHit CountTotal NormTotal
No Reads
dm3
C--------------------------TACAAACATGTGTTA--AAC-ATTATTCGTTCAACC-AATTAACA----------------TCGCCCTATCGTC---AAATCGA----------AATTGGCATTCGGAGATCA-ACAATCGC-------------------------------------------CGTTAAGACAA-------------------------------------GAA-AACATCA-----------------------------------------TGA---CTTGAGGC---GA-TTTT-TAGCGGCAGA----GAAAGCAT-TTCTCT-AACAT-TTGTCTTA---------------ATAATAT--TGTT-----GTACAT----CTTT-TTTACTTCCCCACAGCTGGT----TT--GAGGAGTGCGTAGAA----GAGAGAAGTGTGGA--------GAG---------GAGGA-TG-SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........................................................................................................................................................................................................................................................................................................................TTTT-TAGCGGCAGA----GAAAGCAT-TTCTC..........................................................................................................................................................27138.00380000000000000000000000000000000000001010000000000000000000000000000000000000012120000000000000000000000000000000000000000000000000000000000000000000102000000000000000000000000000000000000000000210040000000000000000000100210010000000000000000000000000000000000000000000000000000000000001000000000030000000000000000000000200801000
........................................................................................................................................................................................................................................................................................................................TTTT-TAGCGGCAGA----GAAAGCAT-T..............................................................................................................................................................23125.00250000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000120000000000000000000200101100000000000000000000000000000000000000000000000000000000000000000000000020000000000010000300000031300000
..........................................................................................................................................................................................................................................................................................................................TT-TAGCGGCAGA----GAAAGCAT-TTCTC..........................................................................................................................................................25123.00230000000000000000000000000000000000001000100000100000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000001010000000000000300000003000000000001000000000000000100000000000000000000000000000000000002000000000200000000000000000300000
........................................................................................................................................................................................................................................................................................................................TTTT-TAGCGGCAGA----GAAAGCAT-TTC............................................................................................................................................................25116.00160000000000000000000000000000000000000000010000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100003000000000000000000000000000000000000100000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000030000001000000000000000000201000
............................................................................................................................................................................................................................................................................................................................................................................................................................................T----TT--GAGGAGTGCGTAGAA----GAGAGAAGT..................................27114.00140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110001110000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000001600000
............................................................................................................................................................................................................................................................................................................................................................................................................................................T----TT--GAGGAGTGCGTAGAA----GAGAGAAG...................................26113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000000000000000000000000000000000000120000000000000000000000000230000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGTAGAA----GAGAGAAGTGTGGA--------GA...................25111.00110000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000120400000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................T--GAGGAGTGCGTAGAA----GAGAGAAGT..................................25111.00110000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000200000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000010000000002000000000000001200000
.....................................................................................................................................................................................................................................................................................................................GA-TTTT-TAGCGGCAGA----GAAAGCAT-T..............................................................................................................................................................2519.0090000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000200000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000001000000000000000200000
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...................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----GAGAGAAGTGTGGA--------GAG---------G........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...........................................................................................................TCGA----------AATTGGCATTCGGAGATCA-ACAAT.................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................ATAT--TGTT-----GTACAT----CTTT-TTTACTTC..................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................TTCTCT-AACAT-TTGTCTTA---------------ATAATAT--..................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAAGTGTGGA--------GAG---------GAGGA-TG-2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................TCTTA---------------ATAATAT--TGTT-----GTACAT----CTT............................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................TGAGGC---GA-TTTT-TAGCGGCAGA----GAAAGCAT-...............................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................GAA-AACATCA-----------------------------------------TGA---CTTGAGGC---GA-TT.........................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................C-ATTATTCGTTCAACC-AATTAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................CTTGAGGC---GA-TTTT-TAGCGGCAGA----........................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................AA-------------------------------------GAA-AACATCA-----------------------------------------TGA---CTTGAGGC---GA-T..........................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
.......................................................................................................................................GATCA-ACAATCGC-------------------------------------------CGTTAAGACAA-------------------------------------G..................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTAGAA----GAGAGAAGTGTGGA--------GA...................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.....................................................................................................................................................................................................................................................ACATCA-----------------------------------------TGA---CTTGAGGC---GA-TTTT-......................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................TCT-AACAT-TTGTCTTA---------------ATAATAT--TGTT-----.........................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................CAATCGC-------------------------------------------CGTTAAGACAA-------------------------------------GAA-AACATCA-----------------------------------------TG.............................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAA----GAGAGAAGTGTG...............................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................GATCA-ACAATCGC-------------------------------------------CGTTAAGACAA-------------------------------------GA.................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................AATTGGCATTCGGAGATCA-ACAATCGC-------------------------------------------C..................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................TTAACA----------------TCGCCCTATCGT...............................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................A----------AATTGGCATTCGGAGATCA-......................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................A-------------------------------------GAA-AACATCA-----------------------------------------TGA---CTTGAGGC---GA-TT.........................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................TTGGCATTCGGAGATCA-ACAATC................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................T----TT--GAGGAGTGCGTAGAA----GAGAGAA....................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TGGT----TT--GAGGAGTGCGTAGAA----GAG........................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................T-TAGCGGCAGA----GAAAGCAT-TTCTC..........................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................A----------------TCGCCCTATCGTC---AAATCGA----------..........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................ATCGC-------------------------------------------CGTTAAGACAA-------------------------------------GAA-AACAT..........................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................CCCACAGCTGGT----TT--GAGGAGTGCGTAA.................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................................................................................................................................................................................................................................................................T-TTGTCTTA---------------ATAATAT--TGTT-----GTACA....................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................GA-TTTT-TAGCGGCAGA----GAAAGCAT-TT.............................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................TCGA----------AATTGGCATTCGGAGATCA-A.....................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
................................................ATTATTCGTTCAACC-AATTAACA----------------TCGCC......................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................GAA-AACATCA-----------------------------------------TGA---CTTGAGGC---GA-T..........................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................TTGGCATTCGGAGATCA-ACAATCGC-------------------------------------------CG.................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAA----GAGAGAAGTGTGGA--------G....................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAA----GAGAGAAGTGTGGA--------GA...................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................ATTGGCATTCGGAGATCA-ACAATCGC-------------------------------------------C..................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.............................................AC-ATTATTCGTTCAACC-AATTAACA----------------TC.........................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................GT----TT--GAGGAGTGCGTAGAA----GAG........................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGTAGAA----GAGAGAAGTGTGG..............................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................A-------------------------------------GAA-AACATCA-----------------------------------------TGA---CTTGAGGC---GA-...........................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................TTA--AAC-ATTATTCGTTCAACC-AATTAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................TACTTCCCCACAGCTGGT----TT--GAGGAGT.......................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...................................................ATTCGTTCAACC-AATTAACA----------------TCGCC......................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................TCGCCCTATCGTC---AAATCGA----------AATT......................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................TGAGGC---GA-TTTT-TAGCGGCAGA----GA......................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................TT-TAGCGGCAGA----GAAAGCAT-TTCTCT-........................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................TAGCGGCAGA----GAAAGCAT-TTCTCT-AACA....................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................A----------AATTGGCATTCGGAGATCA-ACAATC................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................GATCA-ACAATCGC-------------------------------------------CGTTAAGAC..........................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................TATCGTC---AAATCGA----------AATT......................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................TAGCGGCAGA----GAAAGCAT-TTCTCT-AA......................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................TCA-----------------------------------------TGA---CTTGAGGC---GA-TTTT-TAGCGG................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................TCGC-------------------------------------------CGTTAAGACAA-------------------------------------GAA-AACATCA-----------------------------------------TGA---CT.......................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAA----GAGAGAAGTGTGGA--------GAG---------.........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCTGGT----TT--GAGGAGTGCG....................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................AATTAACA----------------TCGCCCTATCGTC---...........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................CGA----------AATTGGCATTCGGAG...........................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................GCAT-TTCTCT-AACAT-TTGT..............................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
droSim2
C-----AGGTTTCTATCATACACCTTCTACAAACATGTGTTA--AAC-ATTATTCGTTCAACC-AACTAACA----------------TCGCCCTATCGTC---AAATTGA----------AATTGGCATTCGGAGATCA-ACAATCGC-------------------------------------------CGTTAAGACAA-------------------------------------GAA-AACATCA-----------------------------------------TGA---CTTGAGGC---GTTTTTT-TAGCGGCAGA----GAAAGCAT-TTCTCT-AACAT-TTGTCTTA---------------ATAATAT--TGTT-----GTACAT----CTTT-TTTACTTCCCCACAGCTGGT----TT--GAGGAGTGCGTAGAA----GAGAGAAGTGTGGA--------------------GAGGA-GG-SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGTAGAA----GAGAGAAGTGTGGA--------------------GA.......2512.00200000000000011000
..................................................................................................................................................................................................TTAAGACAA-------------------------------------GAA-AACATCA-----------------------------------------TGA---CTTGAGG..................................................................................................................................................................................................2912.00200000011000000000
.......................................................................................................................................GATCA-ACAATCGC-------------------------------------------CGTTAAGACAA-------------------------------------GAA-AA.............................................................................................................................................................................................................................................................2912.00200000020000000000
...................................................................................................TC---AAATTGA----------AATTGGCATTCGGAGA..........................................................................................................................................................................................................................................................................................................................................................................2512.00200000011000000000
.........................................................................................................................................................................................................AA-------------------------------------GAA-AACATCA-----------------------------------------TGA---CTTGAGGC---GTT...........................................................................................................................................................................................2612.00200000001001000000
..................................................................................................................................................CGC-------------------------------------------CGTTAAGACAA-------------------------------------GAA-AACATC.........................................................................................................................................................................................................................................................2312.00200000001010000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................CCCACAGCTGGT----TT--GAGGAGTGCGTAGA................................................2812.00200000011000000000
.................................................................................................................................................TCGC-------------------------------------------CGTTAAGACAA-------------------------------------GAA-AACATCA-----------------------------------------TGA---CT.......................................................................................................................................................................................................3012.00200000011000000000
...................................................................................................TC---AAATTGA----------AATTGGCATTCGGA............................................................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
..........................................................................................................................................CA-ACAATCGC-------------------------------------------CGTTAAGACAA-------------------------------------GA.................................................................................................................................................................................................................................................................2311.00101000000000000000
...........................................................................................................TTGA----------AATTGGCATTCGGAGATCA-ACA...................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
..........................................................................................GCCCTATCGTC---AAATTGA----------AATTGGCT..................................................................................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TGGT----TT--GAGGAGTGCGTAGAA----GAGAA......................................2611.00100000010000000000
..........................................................................................................................................................................................................................................................................................................................................................................................AATAT--TGTT-----GTACAT----CTTT-TTTACT....................................................................................2511.00100000010000000000
............................................................................................................................................................................................................................................................................................................................................................................................TAT--TGTT-----GTACAT----CTTT-TTTACT....................................................................................2311.00100000001000000000
..............................................................................................TATCGTC---AAATTGA----------AATTGGCATTCGG.............................................................................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
...........................................................................................................TTGA----------AATTGGCATTCGGAGATCA-ACAATCGC-------------------------------------------...................................................................................................................................................................................................................................................................................................................3111.00100000010000000000
................................................................................................TCGTC---AAATTGA----------AATTGGCATTCGGAGT..........................................................................................................................................................................................................................................................................................................................................................................2811.00100000001000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TTT-TTTACTTCCCCACAGCTGGT----TT--GA............................................................2711.00100010000000000000
....................................................................................................................................................................................................................................................................................................TGA---CTTGAGGC---GTTTTTT-TAGCGG................................................................................................................................................................................2411.00100000001000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGTAGAA----GAGAGAAGTGTGGA--------------------GAGG.....2711.00100000000000010000
...............................AACATGTGTTA--AAC-ATTATTCGTTCAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000100000000
......................................................................................................................................................................................................................................................................................................A---CTTGAGGC---GTTTTTT-TAGCGGC...............................................................................................................................................................................2311.00100000000001000000
......................................................CGTTCAACC-AACTAACA----------------TCGCC......................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100001000000000000
..........................................................................................GCCCTATCGTC---AAATTGA----------AATTGGCA..................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000010000000
...........................................................................................................TTGA----------AATTGGCATTCGGAGATCA-ACAAT.................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
.....................................................................ACA----------------TCGCCCTATCGTC---AAATTGA----------..........................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
.............................................................................................................................................................................................................................................................................................................................TAGCGGCAGA----GAAAGCAT-TTCTCT-AACA....................................................................................................................................................2811.00100000001000000000
................................................................................................................................................................................................................................................GAA-AACATCA-----------------------------------------TGA---CTTGAGGC---..............................................................................................................................................................................................2111.00100000000000100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TGGT----TT--GAGGAGTGCGTAGAA----GAGAGA.....................................2711.00100000000000010000
................................................................AACTAACA----------------TCGCCCTATCGTC---...........................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
...........................TACAAACATGTGTTA--AAC-ATTATTCGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................T--GAGGAGTGCGTAGAA----GAGAGAAGTG.................................2611.00100000000100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................TT--GAGGAGTGCGTAGAA----GAGAGAAGTG.................................2711.00100000000000010000
..........................................................................................................................................................................................................................................................................................................................TT-TAGCGGCAGA----GAAAGCAT-TTCTC..........................................................................................................................................................2511.00100000000001000000
..............................................C-ATTATTCGTTCAACC-AACTAACA----------------TCGCCC.....................................................................................................................................................................................................................................................................................................................................................................................................................3011.00100000010000000000
.........................................................................................................................................................................................................................................................................................................................TTT-TAGCGGCAGA----GAAAGCAT-TTCTC..........................................................................................................................................................2611.00100000000001000000
..........................................................................................................................................CA-ACAATCGC-------------------------------------------CGTTAAGAC..........................................................................................................................................................................................................................................................................................................1911.00100100000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................T----TT--GAGGAGTGCGTAGAA----GAGAGAAGT..................................2711.00100000010000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................CCACAGCTGGT----TT--GAGGAGTGCGTAGA................................................2711.00100000010000000000
.................................................................................................................................................TCGC-------------------------------------------CGTTAAGACAA-------------------------------------GAA-AACATCA-----------------------------------------...............................................................................................................................................................................................................2511.00100001000000000000
.....................................................TCGTTCAACC-AACTAACA----------------TCGCCCTATCGTC---...........................................................................................................................................................................................................................................................................................................................................................................................................3111.00100000010000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGTAGAA----GAGAGAAGTGTGGA--------------------GAGGA-...2811.00100000000000001000
..........TTCTATCATACACCTTCTACAAACAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000000001000
droSec2
C-----AGGTTTCTATCATACACCTTATACAAACATGTGTTA--AAC-ATTATTAGTTCAACC-AACTAACA----------------TCGCCCTATCGCC---AAATTGA----------AATTGGCATTCGGAGATCA-ACAAACGT-------------------------------------------CGTTAAGACAA-------------------------------------GAA-AACATCA-----------------------------------------TGA---CTTGAGGC---GATTTTT-TAGCGGCAGA----GAAAGCAT-TTCTCT-AACAT-TTGTCTTA---------------ATAATAT--TGTT-----GTACAT----CTTT-TTTACTTCCCCACAGCTGGT----TT--GAGGAGTGCGTAGAA----GAGAGAAGTGTGGA--------------------GA----GG-SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................................CTAACA----------------TCGCCCTATCGCC---AA.........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
..........................................................................................................................................................................................................................................................................................................CTTGAGGC---GATTTTT-TAGCGGCA..............................................................................................................................................................................2311.0010010
.................................................................................................................................................................................................................................................AA-AACATCA-----------------------------------------TGA---CTTGAGGC---..............................................................................................................................................................................................2011.0010010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGTAGAA----GAGAGAAGTGTGGA--------------------G........2511.0010100
........................................................................................................AAATTGA----------AATTGGCATTCGGA............................................................................................................................................................................................................................................................................................................................................................................2111.0010100
droYak3
C-----AGGTTTCTATCATACACCTTCTACAAACATGTGTTA--AAC-ATTATTCGTTCAACC-AACTAACA----------------TCGCCCAATCG-----------A----------AATTGGCATTCGAAGATCA-ACTATCGC-------------------------------------------CGCTAAGACAA-------------------------------------GAA-AACATCA-----------------------------------------TGA---TTTGAGGC---GATTTTT-TAGCGGCAGA----GAAAGCAT-TTCTCT-AACAT-TTGTCTTA---------------ATAATAT--TGTT-----GTACAT----CTTT-TTTACTTCCCCACAGCTGGT----TT--GAGGAGTGCGTAGAA----GAGAGAAGTGTGGA--------------------GAGGA-GG-SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................................................................ACTAACA----------------TCGCCCAATCG-----------A----------AATTGGCA..................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000
..................................................................................................................................................................................................................................................A-AACATCA-----------------------------------------TGA---TTTGAGGC---GA............................................................................................................................................................................................2111.00101000000000
.................................................................................................................................................................................................................................................................................................................................................AT-TTCTCT-AACAT-TTGTCTTA---------------...........................................................................................................................2111.00101000000000
......................................................................................................................................................................................................................................................................................................................ATTTTT-TAGCGGCAGA----GAA.....................................................................................................................................................................1911.00101000000000
.....................................................................................................................................................................................................................................................................................................................GATTTTT-TAGCGGCAGA----GA......................................................................................................................................................................1911.00100000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTAGAA----GAGAGAAGTGTGGA--------------------.........2211.00100000010000
.......................CTTCTACAAACATGTGTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000
..................................................................................................................................................................................................CTAAGACAA-------------------------------------GAA-AACATCA-----------------------------------------TGA---TTTGAGG..................................................................................................................................................................................................2911.00100000010000
..........................CTACAAACATGTGTTA--AAC-ATT................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
.....................................................................................................................................AAGATCA-ACTATCGC-------------------------------------------CGCTAAGACAA-------------------------------------GA.................................................................................................................................................................................................................................................................2811.00100000010000
..............................................................................................................................................................................................................................................................................................................................................AGCAT-TTCTCT-AACAT-TTGT..............................................................................................................................................2011.00101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGTGCGTAGAA----GAG........................................1811.00101000000000
droEre2
C-----AGGTTTCTATCATACACCTTCTACAAACATGTGTTA--AAC-ATTATTCGTTCTACC-AACTAACA-----------------CGCCC-ATCGTC---AAATCGA----------AATTGGCATTCGGAGATCA-ACAATCGC-------------------------------------------CGTTAAGACAA-------------------------------------GAA-AACATCA-----------------------------------------TGA---CTAGAGGC---GATTTTT-TAGCGGCAGA----GAAAGCAT-TTCTCT-AACAT-TTGTCTTA---------------ATAATAT--TGTT-----GTACAT----CTTT-TTTACTTCCCCACAGCTGGT----TT--GAGGAGTGCGTAGAA----GAGAGAAGTGTGGA--------------------GAGGA-GG-SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................................................................................................................................TCGGAGATCA-ACAATCGC-------------------------------------------CGTTAAGA...........................................................................................................................................................................................................................................................................................................2615.0050000005
.................................................................................................................................TTCGGAGATCA-ACAATCGC-------------------------------------------CGTTAAGA...........................................................................................................................................................................................................................................................................................................2713.0030000003
........................................................................................................................................................................................................CAA-------------------------------------GAA-AACATCA-----------------------------------------TGA---CTAGAGGC---..............................................................................................................................................................................................2411.0010000100
...........................................................................................................................TTGGCATTCGGAGATCA-ACAATCGC-------------------------------------------CG.................................................................................................................................................................................................................................................................................................................2711.0010000001
......................................................................................................................................................................................................................................................................................................................................................................................................................TT-TTTACTTCCCCACAGCTGGT----TT--GAG...........................................................2711.0011000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................CCCACAGCTGGT----TT--GAGGAG........................................................2011.0010000100
..........................................................................................................................................................................................................A-------------------------------------GAA-AACATCA-----------------------------------------TGA---CTAGAGGC---GA............................................................................................................................................................................................2411.0010000100
...................................................................................................................................................................................................................................................................................................................................................................................................TT-----GTACAT----CTTT-TTTACTTCCCCACAGC..........................................................................2811.0011000000
.............................................................................................................GA----------AATTGGCATTCGGAGATCA-ACAAT.................................................................................................................................................................................................................................................................................................................................................................2611.0010000010
..........TTCTATCATACACCTTCTAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................T--GAGGAGTGCGTAGAA----GAGAGAAG...................................2411.0011000000

Generated: 05/16/2015 at 08:05 PM