ID:

dvi_4834

 Coordinate:

scaffold_12875:1209337-1209544 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [Dvir\GJ21095-cds]; exon [dvir_GLEANR_6483:4]; exon [dvir_GLEANR_6483:5]; CDS [Dvir\GJ21095-cds]; intron [Dvir\GJ21095-in]

No Repeatable elements found

Sense Strand Reads

##################################################----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ATAATCAGAGCACGCCAAAGAAGCAGCAACAGCAGCGCTTTACGACTAAGGTAGAGATTTTTGTTGATTCCTATTAGTAGCTAAGGCTCTTCACTGTACACTATCATCGAACCGAAAACCCATTATAAATATAAGCTTCATGCGTATTTAGTTATAAACAAAAACCGCTTTCTGCTTCTTCTTTGCTTCATACCACACTTCAAATTGTTAATTACCTGTTCACAAATATGTAATCCGTTGCCTTGCGCCATTTTTCAGGCCACACGCGAGCTGTGCATCGATATAAACGATGGCCCGTCTGTGTCGGG
**************************************************(((((((..((((.((((......(((((((....)))....))))......)))).)))).....................((((.....(((..(((.(((...))).)))..))).....))))..)))))))........................(((((.((((....)))).))))).(((......)))...........************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528803
follicle cells		 V053
head
 SRR060682
9x140_0-2h_embryos_total
 SRR060678
9x140_testes_total
 SRR060685
9xArg_0-2h_embryos_total
...............................................................................................................................................................................................................................................................AAGGCCACACGCGAGCT.................................... 17 1 1 2.00 2 2 0 0 0 0
................................................AGGTAGTGATGTTTGTTGGTT............................................................................................................................................................................................................................................... 21 3 2 0.50 1 0 1 0 0 0
..................................................................................................................................AGAATCTTCATGCGTATCTA.............................................................................................................................................................. 20 3 11 0.18 2 0 0 1 0 1
................................................................................................................................................TATGGAGTTATAAACAAAA................................................................................................................................................. 19 2 9 0.11 1 0 0 0 1 0
...............................................................................................................................AATATAAGATTCAAGCGT................................................................................................................................................................... 18 2 15 0.07 1 0 0 1 0 0

Anti-sense strand reads

TATTAGTCTCGTGCGGTTTCTTCGTCGTTGTCGTCGCGAAATGCTGATTCCATCTCTAAAAACAACTAAGGATAATCATCGATTCCGAGAAGTGACATGTGATAGTAGCTTGGCTTTTGGGTAATATTTATATTCGAAGTACGCATAAATCAATATTTGTTTTTGGCGAAAGACGAAGAAGAAACGAAGTATGGTGTGAAGTTTAACAATTAATGGACAAGTGTTTATACATTAGGCAACGGAACGCGGTAAAAAGTCCGGTGTGCGCTCGACACGTAGCTATATTTGCTACCGGGCAGACACAGCCC
**************************************************(((((((..((((.((((......(((((((....)))....))))......)))).)))).....................((((.....(((..(((.(((...))).)))..))).....))))..)))))))........................(((((.((((....)))).))))).(((......)))...........************************************************** 		Read size # Mismatch Hit Count Total Norm Total V053
head
 SRR060672
9x160_females_carcasses_total
 M028
head
 SRR060658
140_ovaries_total
 SRR060671
9x160_males_carcasses_total
 M061
embryo
 V047
embryo
 V116
male body		 SRR060662
9x160_0-2h_embryos_total
 SRR060666
160_males_carcasses_total
 SRR060667
160_females_carcasses_total
 SRR060687
9_0-2h_embryos_total
 SRR060664
9_males_carcasses_total
 SRR060669
160x9_females_carcasses_total
 SRR060665
9_females_carcasses_total
 M047
female body
 SRR060685
9xArg_0-2h_embryos_total
.....................................................................................................................................................................................................................................................................................CGCTGTAATTGCTACCGGGC........... 20 3 6 7.83 47 44 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GCTGTAGTTGCTACCGGGC........... 19 2 1 7.00 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................TCGTTCTATTTGCTACCGGGC........... 21 3 1 6.00 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GTTGTATTTGCTACCGGGC........... 19 2 2 6.00 12 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GTTATAATTGCTACCGGGC........... 19 2 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GCTGTAATTGCTACCGGGC........... 19 2 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................CGTTGTATTTGCTACCGGGC........... 20 3 12 3.92 47 46 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GTTATAGTTGCTACCGGGC........... 19 2 2 3.00 6 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GCTATAGTTGCTACTGGGC........... 19 2 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................CGCTGTAGTTGCTACCGGGC........... 20 3 10 2.80 28 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GCTATACTTGCTACTGGGC........... 19 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GTTCTATTTGCTACCGGGC........... 19 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................CGCTATAATTGCTACCGGGC........... 20 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................TCGTTGTATTTGCTACCGGGC........... 21 3 4 2.00 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................CGCTATAGTTGCTACCGGGC........... 20 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................CTCTATAATTGCTACCGGGC........... 20 3 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................CTATAGTTGCTACTGGGC........... 18 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GTTATAATTGCTACTGGGC........... 19 3 19 1.89 36 32 0 0 0 0 0 0 1 0 1 0 0 0 1 0 1 0
......................................................................................................................................................................................................................................................................................GCTATAATTGCTACTGGGC........... 19 2 2 1.50 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................GTCGTTGTATTTGCTACCGGGC........... 22 3 2 1.50 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................CGCTGTATTTGCTACTGGGC........... 20 3 6 1.50 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GTTCTAGTTGCTACCGGGC........... 19 3 13 1.23 16 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................CGTTATAATTGCTACCGGGC........... 20 3 10 1.20 12 10 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.....................................................................................................................................................................................................................................................................................CGCTATAGTTGCTACTGGGC........... 20 3 7 1.14 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................CGTTATATTTGCTACCGGGC........... 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................CGCTATATTTGCTACGGGGC........... 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................TCGCTATATCTGCTACCGGGC........... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................AGTTGTATTTGCTACCGGGC........... 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................GTCGCCGTATTTGCTACCGGGC........... 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GTTATATTTGCTACAGGGC........... 19 2 2 1.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GCTGTATTGGCTACCGGGC........... 19 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................AGTTATAATTGCTACCGGGC........... 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................CCGCTGTATTTGCTACCGGGC........... 21 3 2 1.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GCTGTATTTGCTACTGGGC........... 19 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................CGCTATATTTGCTACAGGGC........... 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................AGTTATAGTTGCTACCGGGC........... 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................GTCGTTCTATTTGCTACCGGGC........... 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................CTATACTTGCTACTGGGC........... 18 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................AGTTGTAGTTGCTACCGGGC........... 20 3 9 1.00 9 4 1 3 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................................................................................................................CGTTCTATTTGCTACCGGGC........... 20 3 5 0.80 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................CGCTATAATTGCTACAGGGC........... 20 3 9 0.78 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GTTATAATTGCTACAGGGC........... 19 3 20 0.65 13 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GTTCTATTTGCTACAGGGC........... 19 3 13 0.62 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GTTTTATTTGCTACCGGGC........... 19 2 5 0.60 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................TCGCTGTATTTGCTACCCGGC........... 21 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GCTCTAGTTGCTACCGGGC........... 19 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................GTAGTTGTATTTGCTACTGGGC........... 22 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................CAGCTGTATTTGCTACTGGGC........... 21 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................CGAGATGGTGATTCCATCCC............................................................................................................................................................................................................................................................ 20 3 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................AGCTGTAATTCCTACCGGGC........... 20 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................CGCTATAATTCCTACCGGGC........... 20 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................CTGTAGTTGCTACCGGGC........... 18 2 6 0.50 3 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................CACTATAATTGCTACCGGGC........... 20 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................AGCTGTATTTGCTACAGGGC........... 20 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GGTGTATTTGCTACCGGGC........... 19 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................CCGCTATAATTGCTACCGGGC........... 21 3 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................CAGCTATAATTGCTACAGGGC........... 21 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................AGCTGTATTTGCTACCGGGA........... 20 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................AGTTGTATTTGCTACAGGGC........... 20 3 7 0.43 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................CGCTGTATTTGCTACAGGGC........... 20 3 7 0.43 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................CGTTATATTTGCTACTGGGC........... 20 3 7 0.43 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GTTCTAATTGCTACCGGGC........... 19 3 12 0.42 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................GGCTGTAGTTGCTACCGGGC........... 20 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................TTATAATTGCTACCGGGC........... 18 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................CTCTATAGTTGCTACCGGGC........... 20 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................TGGTGTATTTGCTACCGGGC........... 20 3 6 0.33 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................CGCAGTATTTGCTACCGGGC........... 20 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................TCGGTCTATTTGCTACCGGGC........... 21 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................CGCTATAATTGCTACGGGGC........... 20 3 6 0.33 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GCTGTAGTTGCTACGGGGC........... 19 3 20 0.30 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................TTATAGTTGCTACCGGGC........... 18 2 7 0.29 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GGTCTATTTGCTACAGGGC........... 19 3 11 0.27 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................TCTATAGTTGCTACAGGGC........... 19 3 11 0.27 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................TGTGGTCGGGAAATGCTG...................................................................................................................................................................................................................................................................... 18 2 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................CGCTCTATTTGCTACAGGGC........... 20 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................GTCGCTCTAGTTGCTACCGGGC........... 22 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................TGTGCGTTCCACACGTAG............................. 18 2 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................AGTAGTATTTGCTACCGGGC........... 20 3 8 0.25 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................CGCTTTAATTGCTACCGGGC........... 20 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................CGCTTTAGTTGCTACCGGGC........... 20 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................CCAGCTCTAAAAACAAATA................................................................................................................................................................................................................................................ 19 2 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................CGATGTATTTGCTACCGGGC........... 20 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................AGCTGTAATTGCTACTGGGC........... 20 3 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................CCGCTATAGTTGCTACCGGGC........... 21 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GCTCTAATTGCTACTGGGC........... 19 3 10 0.20 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................CGCGATAGTTGCTACCGGGC........... 20 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................AGTTCTATTTGCTACCCGGC........... 20 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................GTCGCTGTAGTTGCTACCGGGC........... 22 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................GGCTGTATTTGCTACTGGGC........... 20 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GCTGTACTTGCTACTGGGC........... 19 3 12 0.17 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................CGCTGTATTTGCTACCCGGC........... 20 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GTTATACTTGCTACCGGGC........... 19 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................TTGTTGGCGAAAGATGAA................................................................................................................................... 18 2 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GTTGTACTTGCTACCGGGC........... 19 3 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................CGCTATCTTTGCTACTGGGC........... 20 3 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................CGATATAATTGCTACCGGGC........... 20 3 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................AGCTGTAGTTGCTACCGGGA........... 20 3 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................AGTTATAATTGCTACTGGGC........... 20 3 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................AGATTTATTTGCTACAGGGC........... 20 3 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GCTATAATTGCTCCAGGGC........... 19 3 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................AGCTATATCTGCTACGGTGC........... 20 3 9 0.11 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GTTATAATTGCTACGGGGC........... 19 3 18 0.11 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................AGCTTTAGTTGCTACTGGGC........... 20 3 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................CGCTGTATTTGCTACCGGGT........... 20 3 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................AGTTACATTTGCTACTGGGC........... 20 3 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GGTCTATTTGCTGCCGGGC........... 19 3 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GGTATAGTTGCTACTGGGC........... 19 3 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GCTGTAGGTGCTACCGGGC........... 19 3 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................TGTTCTATTTGCTACCGGGC........... 20 3 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................CGCTATACTTGCTACAGGGC........... 20 3 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................AGCTATACTTGCTACTGGAC........... 20 3 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................AGTTGTATTTGCTACCGGGT........... 20 3 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................TCCATCTTTGCTACCGGGC........... 19 3 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GTCATAGTTGCTACCGGGC........... 19 3 11 0.09 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GGTCTATTTGCTACTGGGC........... 19 3 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GCTGTAATTGCTCCCGGGC........... 19 3 13 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GTTATAGTGGCTACCGGGC........... 19 3 13 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................CTTCGACGTTTTCTTCGCGAA............................................................................................................................................................................................................................................................................ 21 3 14 0.07 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................CGCTGTATTTGCTACCGGTC........... 20 3 14 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GTTCTATTGGCTACCGGGC........... 19 3 14 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GCTGTATTTGATACTGGGC........... 19 3 15 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................CGTCGCGAACTGTAGATTCC................................................................................................................................................................................................................................................................. 20 3 15 0.07 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GGTATAATTGCTACTGGGC........... 19 3 15 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GGTCTAATTGCTACCGGGC........... 19 3 15 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GCGGTAGACGAAGCAGAAAC........................................................................................................................... 20 3 16 0.06 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GCTATAGTAGCTACTGGGC........... 19 3 17 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................TCTATAATTGCTACAGGGC........... 19 3 17 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GGTATATTTGCTTCCGGGC........... 19 2 17 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GCTGTACTTGCTACGGGGC........... 19 3 18 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GTAGTATTTGCTACCGGGC........... 19 3 18 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................TGTATATTTGCTACTGGGC........... 19 3 18 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................ACGAAGTAAGGTCGGAAGTT......................................................................................................... 20 3 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
......................................................................................................................................................................................................................................................................................TCTATAATTGCTACTGGGC........... 19 3 19 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................CGCTAAAATTGCTACCGGGC........... 20 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GGTGTACTTGCTACCGGGC........... 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................CGCTGTAATTGCTACCGGG............ 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GTTTTATCTGCTACCGGGC........... 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GGTGTATTTGCGACCGGGC........... 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GGTATAGTTGCTACCGGGC........... 19 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GGAATAGTTGCTACCGGGC........... 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................TTGGGCAACATTTAGATTC............................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.....................................................................................................................................................................................................................................................................................TGGTATATTTGCTACCGAGC........... 20 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................ACGCTATAGTTGCTACCGGGC........... 21 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GCTTTAGTTGCTACAGGGC........... 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................TGAGGCAACGGAGCGCGT........................................................... 18 3 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GTATTATTTGCTACCGGGC........... 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................CGTTATAATTGCTACCGGG............ 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................AGTTGTAGTTGCTACCGGG............ 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12875:1209287-1209594 - dvi_4834 ATAATCAGAGCACGCCAAAGAAGCA---------------------GCAACAGCAGCGCTTTACGACTAAGGTAGAGATTTTTGTTGATTCCTATTA-GTAGCTA-AGGCTCTT-------------------CAC------TGTAC-----------------------------------------------------ACTATCA----------------TCG-------AACC-GAAA--ACCC------------------ATTATAAATATAAGCTTCATGCGTATTTAGTTATA-----AACAA-------AAACCGCTTTCT----GCTTCTTCTTTGCTTC---------------ATAC--CACA------------------------------CTTCAAATTGTTAATTACCTGTTCACAAATATGTAATCCGTTGCCT------TG----CGCCATTTTTCAGGCCACAC------GCGAGCTGTGCATCGATATAAACGATGGCCCGTCTGTGTC------------GGG
droMoj3 scaffold_6496:4274421-4274733 - ATAATCAAAGCACGCCAAAGAAACA------------ACCACAGCAGCAGCAGCAGCGCTTTACGACTAAGGTAGAGATTTTTGTTGATACTCATTA-GCCAACGCACACTTTC-------------------GCT-------GTAT-----------------------------------------------------ACATACA----------------TTT-------ATCAAGAAA--TCCCTGTACAGTTATATCACACATTATA------------------AATTAGTTATA-----AACAAAACGACAAAAACACTTTCTGCTTGCTTCTTCTTTGCTTTGCC------------AACA--CACA------------------------------CTTTAACTAAGT-----TTAG--T----ATATGCTAACCATTGCCTTGCGCCCA----ATT--TATTTTAG------------------CCCAGCATTGATATCAATGATGGTCCGTCGGTGTC------------AGG
droGri2 scaffold_15245:9777355-9777680 + ATAATCAGAGCACACCAA---AGAA---------------------GCAGAATCAGCGCTTTACGACTAAGGTAGAGATTTTTGTTGATTCCTATTA-GCATAAA-TGACTTTT----------------------------------------------------------CACACTGTAT--TTA-TTC-AC-TGTACACAATCA----------------TCA-------ATCC-CATAAACCAC------------------ATTACAAATATAAGCTTCTCGCATAATTAGCTGTACAGCAAAAAA-------AAAACCTTTCCT----GCTGATTCTTTGCTTT---------------AATC--------------------------------TCAGCTTCAACTTGTTAATGATTAG--CATCCATTTGTTATTGCTTGCGTTGTGC---------CCTTTTTTCAGCCCTCGC------GTGAGCTCAGCATTGATATAAACGATGGCCCTACGGTATC------------AGG
droWil2 scf2_1100000004954:2468782-2469099 + dwi_3717 AGAATCAGAGCACACCGAAAAAGAA---------------------GCCAGATTCACGATTTACAACTAAGGTAGAGATTTTTGTTGATTCCCATTA-GCATTCA-GGACTTTTTGGTTTCTTTATCGCTTTCGCT------TCCACAT--------------ACATG----CAT-----AC-ATA-CT--TATATATACATATATATTCTTAATCATATTTTGCAACTATC-------GC-----A------------------------------------------------------CTGT-------------------------AC----TC-------GCTTTTC----CATCTTTCAAATA--CAAAC------TGTGCTC---TT---------AACTCAATTTGAGTAA--------------------------------------AATTTAATTTGATTTTCAGCCCACGC------GCTCACTCAGCGTAGATATAAATGATGGTCCCTCAACGCCAGTGCGCCCGTTTGG
dp5 3:9421181-9421488 + AGAACCAGAGCACACCAAAAAAGA------------------------CAAGCCAACGATATACAACTAAGGTAGAGATTTTTGTTGACTCCTATTA-GCGCCTA-AGGCTTTCT------------------GCTTTCACTTGCCATT-------GCCATGTTCTTG----GAAATTGTAA--CC------CTTTGTATATATATA----------------TCCATAACT-------AC-----A------------------------------------------------------CTGT-------------------------AC----ACAGCTCGCGCT-TCTGAA--GCATTTGAAATA--TATG-------TAAGCTGCTTC--CTTTGGTTATCTAAACACGCGTAA--------------------------------------TA----ATTAATTTTCCAGCCACCGA------GCAATCTCAGCATCGACATCAACGATGCCACACAGTCGCCAGCGCGTCCATTTGG
droPer2 scaffold_4:4743472-4743779 + AGAACCAGAGCACACCAAAAAAGA------------------------AAAGCCAACGATATACAACTAAGGTAGAGATTTTTGTTGACTCCTATTA-GCGCCTA-AGGCTTTCT------------------GCTTTCACTTGCCATT-------GCCATGTTCTTG----GAGATTGTAA--CC------CTTTGAATATATATA----------------TCCATAACT-------AC-----A------------------------------------------------------CTGT-------------------------AC----ACAGCTCGCGCT-TCTGAA--GCATTTGAAATA--TATG-------TAAGCTGCTTC--CTTTGGTTATCTAAACACGCGTAA--------------------------------------TA----ATTCATTTTCCAGCCACCGA------GCAATCTCAGCATCGACATCAACGATGCCACACAGTCGCCAGCGCGTCCATTTGG
droAna3 scaffold_13266:8218079-8218366 - AGAACCAGAGCACCCCCAAGAAGCA------------AGTGCCGCCGAAGAGCCAGCGCTTCACAACTAAGGTAGAGATTTTTGTTGACTCTCATTA-GAAAGTA-AGGCTTCC-------------------TTT------CGCATAT-----------------TCGCAAAATATTGTAACATT------CT-----TGTATATA----------------ACTAT------------------G---------------------------------------------------------------------------------------------CCATGACTATCC-AAACGCTTCTGAAATA--TAAG-------TTGGTTC---CT-TGTTCATCATCTTCCATTGAGTAA--------------------------------------TG----GTTTGTTTTTCAGCCGACAC------GCAATCTCAGCATTGATATAAACGATAGCCAGACCACGCCTCTGCGTCCTCTGGG
droBip1 scf7180000396759:598976-599258 + AGAACCAGAGTACTCCAAAGAAAAA------------AGTGCCGCCAAATAGCCAGCGCTTCACAACTAAGGTAGAGATTTTTGTTGACTCTCATTA-GAAACTA-AGGCTTTT-------------------TCTTT----CGCAT-------------------------ACTATTGTAATACT------CT-----TGTAAATA----------------CCTAT------------------G---------------------------------------------------------------------------------------------CCATGACTATCT-AATCGCTTTCGAAATA--CAAG-------TTGGCTT---CTTTGTTCATCATCTTCGATTGAGTAA--------------------------------------TG----GTTTGTTTTTCAGCCTGCAC------CCAATCTCAGCATTGATATAAACGATAGCCAAACCACGCCTCTGCGTCCTTTGGG
droKik1 scf7180000302470:2150337-2150634 + AGAACCAAAGTACCCCGAAAAAGAGGCAACAACAGCAGCCACAGCAGCAGAGCCAGAGGTTCACCACCAAGGTAGAGATTTTTGTTGACTCCCATTA-AGGGATA-------------------------------------------------------------------CACTCTGTAT--AC------AC-----TGTAAATA----------------GCTTCTATCCATCATCACT--T-G-------------------------------------------------CTGTACTGT-------------------------AC--ACTCATCCATGGCTTTCTTA--------TAAAATACACAAA-------TTTGTTG---G----TTCATCAACTTTGATTCAGTAG--------------------------------------A-TTCAGTTTGTCTTTCAGCCTGCCGCCGCCGGTAATCTAAGCATTGATATTAACGATGGCCCAGCCACGCCGCTGCG---------
droFic1 scf7180000453809:632346-632633 + --AATCAGAGTACGCCAAAAAAGAA---------------------GCAGAGTCAGCGGTTCACAACCAAGGTAGAGATTTTTTTTGACTCCCATTA-GAGTTTA-AGGCTTTC-------------------GCT------TGCAT-------------------CC----GACATTGTTA--CT------CT-----TGTAAATA----------------TCCACTATC-------AC-----T------------------------------------------------------CTGT-------------------------AT--A-ATATCCATCGCTTTCTAAAACGCATTTGAAATA--TAAC-------ATTGTTT---TTGGTTTGGTTATCTGAGACTGAGTAA--------------------------------------TA----ATTAATTTTTCAGCCTTCAC------GCAATCTTACCATCGATATCAACGATGGCCCAACCACGCCGCTGCGTAAATTCGG
droEle1 scf7180000491201:1196306-1196594 + CCAACCAGAGCACTCCCAAAAAGAA---------------------GCAGAGCCAGCGGTTTACAACCAAGGTAGAGATTTTTGTTGACTCCCATTA-GAGCTTA-AGGCTTTC-------------------GCT------TGCAT-------------------TC----GACACTGTAA--CT------TC-----TGTAAATA----------------GCCACTATC-------AC-----A------------------------------------------------------CTGT-------------------------AC----TCATCCGAATCTTTCCGAAACGCATTTGAAATA--TAAG-------ATTGTTT---TTGCTTTGGCCATAAGAAATTGAGTAA--------------------------------------TA----GTCAATCTTTCAGCCATCGC------GCAATCTGACCATCGACATAAACGATGGCCCAGTCACGCCACTGCGTCAATTTGG
droRho1 scf7180000778122:76488-76768 + --AACCAGAGTACGCCGAAAAAGAA---------------------GCAGAGCCAGCGGTTCACAACCAAGGTAGAGATTTTTGTTGACTCTCATT--------A-AGGCTTCT-------------------GCT------TACAT-------------------TC----GACACTGTTA--ACA-----CT-----TGTAAATA----------------GCCACTATC-------AC-----T------------------------------------------------------CTGT-------------------------AC----TCATCCAAATCTTTTCGAAACGCATATGAAATA--TAAG-------ATTGTTT---TTGTTTTGGTTGTATGAAATTGAGTAA--------------------------------------TA----ATTAATCTTTCAGCCCTCGC------GCAATCTGACCATAGATATAAACGATGGCCCAGCCACGCCGCTGCGTCAGTTTGG
droBia1 scf7180000301754:4049998-4050273 - CTAACCAGAGTACACCGAAAAAGAA---------------------GCAGAGCCAGCGGTTTACAACCAAGGTAGAGATATTTGTTGACTCCCACTA-GAGGTTA-AGGCTTTC-------------------GCT------TGCAT-------------------CA----CACATTGTAA--CT------CC-----TGTAAATA----------------GCCACTATC-------AC-----A------------------------------------------------------CTGT-------------------------AC----TCATCCAAAGCTTTCTGAAACGCATTTGAAATA--TAAG-------TTTGTTG---TT-------------GAAACTGAGTAA--------------------------------------TG----ATTGATTTTTCAGCCCTCGC------GCAATCTAACCATTGATATAAACGATGGCCCAGCCACGCCGCTGCGCCAATTTGG
droTak1 scf7180000415306:94477-94759 + CTAACCAGAGTACGCCGAAAAAGAA---------------------GCAGAGCCAGCGGTTTACGACCAAGGTAGAGATATTTGTTGACAACCCCTAAAAGGTTA-AGGCTTTC-------------------GCT------TGCATCT-----------------CC----GACATTGTAA--CT------CC-----TGTAAATA----------------GCCACTTTC-------AC-----A------------------------------------------------------CTGT-------------------------AC--ACTCATCCA----TTTTCGATACGCATTTGAAATA--TACT-CGTAAGATTGTTG---TT-------------GAAACTGAGTAA--------------------------------------TG----ATTCGTCTTTCAGCCCTCGC------GCAATCTAACCATTGATATAAACGATGGCCCAGCCACGCCGTTGCGTTCGTTTGG
droEug1 scf7180000409474:65083-65358 + CTAACCAAAGCACTCCGAAAAAGAA---------------------GCAGATACAGCGGTTTACAACCAAGGTAGAAATTTTTGTTGACTCCCACTA-GAAATTA-AGGCTTTC-------------------GCT------TCTGT-------------------CC----GACATTGTAA--AT------CT-----TGTACATA----------------GCCACTATC-------AC-----A------------------------------------------------------CTGT-------------------------AC----TCATTCATGGCTTTTCAAAATGCATTTCAAATA--TAAT-------TTTGTTG---TT-------------GAAAATGAGTAA--------------------------------------TG----ATTAATTTTTCAGCCATCGC------GAAATCTAACCATTGATGTAAACGATGGCCCAGCCACTTCGTTGCGCCAATATGG
dm3 chr2R:19579911-19580184 - CCAACCAGAGTACGCCGAAAAAGAA---------------------GCAGAGCCAGCGCTTTACAACCAAGGTAGAGATTTTTGTTGACTCCCACTA-AAGCTTA-AGGCTTCC-------------------GCT------TGCATCTGATT-------T-----CT----GACACTGTAC--AT------TC-----TGTAAATA----------------GCCACTACC-------AC-----A------------------------------------------------------CTGT-------------------------AC----TCATCCATCGCTTTCTGAAACGCACTTCAAATA--TAAG-------ATTGTTG---TT-------------GAAACTGAGTAA--------------------------------------TG----ATTGATCTTTCAGCCCGCTT------CCAATTTGACCATAGAAATTAATGATGGCCAAGCCACGTCGCTGCG---------
droSim2 2r:20088873-20089162 - dsi_16014 CCAACCAGAGTACGCCGAAAAAGAA---------------------GCAGAGCCAGCGCTTTACAACCAAGGTAGAGATTTTTGTTGACTCCCACTA-AAGCTTA-AGGCTTCC-------------------GCT------TGCATCTGATTTCTGACAT-----CT----GACACTGTAA--AT------CC-----TGTAAATA----------------GACACTACC-------AC-----G------------------------------------------------------CTGT-------------------------AC----TCATCTAAAGCTTTCTGAAACGCACTTCAAATA--TAAG-------ATTGTTG---TT-------------GAAACTGAGTAA--------------------------------------TG----ATTGATCTTTCAGCCCGCTT------CCAATTTGACCATAGAAATTCATGATGGCCAAGCCACGTCGCTGCGCCAGTTTGG
droSec2 scaffold_9:2859061-2859350 - CCAACCAGAGTACGCCGAAAAAGAA---------------------GCAGAGCCAGCGCTTTACAACCAAGGTAGAGATTTTTGTTGACTCCCACTA-AAGCTTA-AGGCTTCC-------------------GCT------TGCATCTGATTTCTGACAT-----CT----GACACTGTAA--AT------CC-----TGTAAATA----------------GACACTACC-------AC-----G------------------------------------------------------CTGT-------------------------AC----TCATCTAAAGCTTTCTGAAACACACTTCAAATA--TAAG-------ATTGTTG---TT-------------GAAACTGAGTAA--------------------------------------TG----ATTGATCTTTCAGCCCGCTT------CCAATTTGACCATAGAAATTCATGATGGCCAAGCCACGTCGCTGCGCCATTTGGG
droYak3 2R:19556678-19556973 - CTAACCAGAGCACTCCGAAAAAGAA---------------------GCAGAACCAGCGGTTTACAACCAAGGTAGAGATATTTGTTGACTCCCACTA-GAGCTTA-AGGCTTCC-------------------GCTTCCGCTAGCATCTGACATTTGACAT-----CT----GACACTGCAA--AT------CC-----TGTACATA----------------GCCACTATC-------AC-----A------------------------------------------------------CTGT-------------------------AC----TCATCCAAAGCTATCTGAAACGCACTACAAATA--TAAG-------ATTGTTG---TT-------------GAAACTGAGTAA--------------------------------------TG----ATTGATCTTTCAGCCCGCTC------CCAATTTGACCATTGAAATTAATGATGGCCAAGCCACGTCGCTGCGCCATTTTGG
droEre2 scaffold_4845:20941717-20941998 - CTAACCAGAGCACACCGAAAAAGAA---------------------GCAGAGCCAGCGGTTCACAACCAAGGTAGAGATATTTGTTGACTCCCACTA-GAGCTTA-AGGCTTTC-------------------GCT------TGCATCTG-------ACAT-----CT----GCCACTGTAA--AT------CT-----TGTAAATA----------------GCCACTATC-------AC-----A------------------------------------------------------CTGT-------------------------AC----TCATCCAAAGCTTTCTGA-ACGCACTTCAAATA--TAAG-------ATTGTTG---TT-------------GAAACTGAGTAA--------------------------------------TG----ATTGATCTTTCAGCCCGCTC------CCAATTTGACCATTGAAATTAATGATGGCCAAGCCACGTCACTGCGCCATTTTGG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
ATAATCAGAGCACGCCAAAGAAGCA---------------------GCAACAGCAGCGCTTTACGACTAAGGTAGAGATTTTTGTTGATTCCTATTA-GTAGCTA-AGGCTCTT-------------------CAC------TGTAC-----------------------------------------------------ACTATCA----------------TCG-------AACC-GAAA--ACCC------------------ATTATAAATATAAGCTTCATGCGTATTTAGTTATA-----AACAA-------AAACCGCTTTCT----GCTTCTTCTTTGCTTC---------------ATAC--CACA------------------------------CTTCAAATTGTTAATTACCTGTTCACAAATATGTAATCCGTTGCCT------TG----CGCCATTTTTCAGGCCACAC------GCGAGCTGTGCATCGATATAAACGATGGCCCGTCTGTGTC------------GGGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
ATAATCAAAGCACGCCAAAGAAACA------------ACCACAGCAGCAGCAGCAGCGCTTTACGACTAAGGTAGAGATTTTTGTTGATACTCATTA-GCCAACGCACACTTTC-------------------GCT-------GTAT-----------------------------------------------------ACATACA----------------TTT-------ATCAAGAAA--TCCCTGTACAGTTATATCACACATTATA------------------AATTAGTTATA-----AACAAAACGACAAAAACACTTTCTGCTTGCTTCTTCTTTGCTTTGCC------------AACA--CACA------------------------------CTTTAACTAAGT-----TTAG--T----ATATGCTAACCATTGCCTTGCGCCCA----ATT--TATTTTAG------------------CCCAGCATTGATATCAATGATGGTCCGTCGGTGTC------------AGGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAACCATTGCCTTGCGCC.......................................................................................2011.001000010
droGri2
ATAATCAGAGCACACCAA---AGAA---------------------GCAGAATCAGCGCTTTACGACTAAGGTAGAGATTTTTGTTGATTCCTATTA-GCATAAA-TGACTTTT----------------------------------------------------------CACACTGTAT--TTA-TTC-AC-TGTACACAATCA----------------TCA-------ATCC-CATAAACCAC------------------ATTACAAATATAAGCTTCTCGCATAATTAGCTGTACAGCAAAAAA-------AAAACCTTTCCT----GCTGATTCTTTGCTTT---------------AATC--------------------------------TCAGCTTCAACTTGTTAATGATTAG--CATCCATTTGTTATTGCTTGCGTTGTGC---------CCTTTTTTCAGCCCTCGC------GTGAGCTCAGCATTGATATAAACGATGGCCCTACGGTATC------------AGGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
AGAATCAGAGCACACCGAAAAAGAA---------------------GCCAGATTCACGATTTACAACTAAGGTAGAGATTTTTGTTGATTCCCATTA-GCATTCA-GGACTTTTTGGTTTCTTTATCGCTTTCGCT------TCCACAT--------------ACATG----CAT-----AC-ATA-CT--TATATATACATATATATTCTTAATCATATTTTGCAACTATC-------GC-----A------------------------------------------------------CTGT-------------------------AC----TC-------GCTTTTC----CATCTTTCAAATA--CAAAC------TGTGCTC---TT---------AACTCAATTTGAGTAA--------------------------------------AATTTAATTTGATTTTCAGCCCACGC------GCTCACTCAGCGTAGATATAAATGATGGTCCCTCAACGCCAGTGCGCCCGTTTGGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................................................................................................................TGGTTTCTTTATCGCTTTCGCT------TCC...............................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
......................................................................................................................................................................................................................................................................................................................................................................TCTTTCAAATA--CAAAC------TGTGCTC---TT---------AAC..........................................................................................................................................2811.00101000
dp5
AGAACCAGAGCACACCAAAAAAGA------------------------CAAGCCAACGATATACAACTAAGGTAGAGATTTTTGTTGACTCCTATTA-GCGCCTA-AGGCTTTCT------------------GCTTTCACTTGCCATT-------GCCATGTTCTTG----GAAATTGTAA--CC------CTTTGTATATATATA----------------TCCATAACT-------AC-----A------------------------------------------------------CTGT-------------------------AC----ACAGCTCGCGCT-TCTGAA--GCATTTGAAATA--TATG-------TAAGCTGCTTC--CTTTGGTTATCTAAACACGCGTAA--------------------------------------TA----ATTAATTTTCCAGCCACCGA------GCAATCTCAGCATCGACATCAACGATGCCACACAGTCGCCAGCGCGTCCATTTGGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................................................................................................................................................................................................................................................................................................................................................ATG-------TAAGCTGCTTC--CTTTGGTTATCTA........................................................................................................................................2711.0010100000000
droPer2
AGAACCAGAGCACACCAAAAAAGA------------------------AAAGCCAACGATATACAACTAAGGTAGAGATTTTTGTTGACTCCTATTA-GCGCCTA-AGGCTTTCT------------------GCTTTCACTTGCCATT-------GCCATGTTCTTG----GAGATTGTAA--CC------CTTTGAATATATATA----------------TCCATAACT-------AC-----A------------------------------------------------------CTGT-------------------------AC----ACAGCTCGCGCT-TCTGAA--GCATTTGAAATA--TATG-------TAAGCTGCTTC--CTTTGGTTATCTAAACACGCGTAA--------------------------------------TA----ATTCATTTTCCAGCCACCGA------GCAATCTCAGCATCGACATCAACGATGCCACACAGTCGCCAGCGCGTCCATTTGGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
AGAACCAGAGCACCCCCAAGAAGCA------------AGTGCCGCCGAAGAGCCAGCGCTTCACAACTAAGGTAGAGATTTTTGTTGACTCTCATTA-GAAAGTA-AGGCTTCC-------------------TTT------CGCATAT-----------------TCGCAAAATATTGTAACATT------CT-----TGTATATA----------------ACTAT------------------G---------------------------------------------------------------------------------------------CCATGACTATCC-AAACGCTTCTGAAATA--TAAG-------TTGGTTC---CT-TGTTCATCATCTTCCATTGAGTAA--------------------------------------TG----GTTTGTTTTTCAGCCGACAC------GCAATCTCAGCATTGATATAAACGATAGCCAGACCACGCCTCTGCGTCCTCTGGGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
AGAACCAGAGTACTCCAAAGAAAAA------------AGTGCCGCCAAATAGCCAGCGCTTCACAACTAAGGTAGAGATTTTTGTTGACTCTCATTA-GAAACTA-AGGCTTTT-------------------TCTTT----CGCAT-------------------------ACTATTGTAATACT------CT-----TGTAAATA----------------CCTAT------------------G---------------------------------------------------------------------------------------------CCATGACTATCT-AATCGCTTTCGAAATA--CAAG-------TTGGCTT---CTTTGTTCATCATCTTCGATTGAGTAA--------------------------------------TG----GTTTGTTTTTCAGCCTGCAC------CCAATCTCAGCATTGATATAAACGATAGCCAAACCACGCCTCTGCGTCCTTTGGGSizeHit CountTotal NormTotal
No Reads
droKik1
AGAACCAAAGTACCCCGAAAAAGAGGCAACAACAGCAGCCACAGCAGCAGAGCCAGAGGTTCACCACCAAGGTAGAGATTTTTGTTGACTCCCATTA-AGGGATA-------------------------------------------------------------------CACTCTGTAT--AC------AC-----TGTAAATA----------------GCTTCTATCCATCATCACT--T-G-------------------------------------------------CTGTACTGT-------------------------AC--ACTCATCCATGGCTTTCTTA--------TAAAATACACAAA-------TTTGTTG---G----TTCATCAACTTTGATTCAGTAG--------------------------------------A-TTCAGTTTGTCTTTCAGCCTGCCGCCGCCGGTAATCTAAGCATTGATATTAACGATGGCCCAGCCACGCCGCTGCG---------SizeHit CountTotal NormTotal
No Reads
droFic1
--AATCAGAGTACGCCAAAAAAGAA---------------------GCAGAGTCAGCGGTTCACAACCAAGGTAGAGATTTTTTTTGACTCCCATTA-GAGTTTA-AGGCTTTC-------------------GCT------TGCAT-------------------CC----GACATTGTTA--CT------CT-----TGTAAATA----------------TCCACTATC-------AC-----T------------------------------------------------------CTGT-------------------------AT--A-ATATCCATCGCTTTCTAAAACGCATTTGAAATA--TAAC-------ATTGTTT---TTGGTTTGGTTATCTGAGACTGAGTAA--------------------------------------TA----ATTAATTTTTCAGCCTTCAC------GCAATCTTACCATCGATATCAACGATGGCCCAACCACGCCGCTGCGTAAATTCGGSizeHit CountTotal NormTotal
No Reads
droEle1
CCAACCAGAGCACTCCCAAAAAGAA---------------------GCAGAGCCAGCGGTTTACAACCAAGGTAGAGATTTTTGTTGACTCCCATTA-GAGCTTA-AGGCTTTC-------------------GCT------TGCAT-------------------TC----GACACTGTAA--CT------TC-----TGTAAATA----------------GCCACTATC-------AC-----A------------------------------------------------------CTGT-------------------------AC----TCATCCGAATCTTTCCGAAACGCATTTGAAATA--TAAG-------ATTGTTT---TTGCTTTGGCCATAAGAAATTGAGTAA--------------------------------------TA----GTCAATCTTTCAGCCATCGC------GCAATCTGACCATCGACATAAACGATGGCCCAGTCACGCCACTGCGTCAATTTGGSizeHit CountTotal NormTotal
No Reads
droRho1
--AACCAGAGTACGCCGAAAAAGAA---------------------GCAGAGCCAGCGGTTCACAACCAAGGTAGAGATTTTTGTTGACTCTCATT--------A-AGGCTTCT-------------------GCT------TACAT-------------------TC----GACACTGTTA--ACA-----CT-----TGTAAATA----------------GCCACTATC-------AC-----T------------------------------------------------------CTGT-------------------------AC----TCATCCAAATCTTTTCGAAACGCATATGAAATA--TAAG-------ATTGTTT---TTGTTTTGGTTGTATGAAATTGAGTAA--------------------------------------TA----ATTAATCTTTCAGCCCTCGC------GCAATCTGACCATAGATATAAACGATGGCCCAGCCACGCCGCTGCGTCAGTTTGGSizeHit CountTotal NormTotal
No Reads
droBia1
CTAACCAGAGTACACCGAAAAAGAA---------------------GCAGAGCCAGCGGTTTACAACCAAGGTAGAGATATTTGTTGACTCCCACTA-GAGGTTA-AGGCTTTC-------------------GCT------TGCAT-------------------CA----CACATTGTAA--CT------CC-----TGTAAATA----------------GCCACTATC-------AC-----A------------------------------------------------------CTGT-------------------------AC----TCATCCAAAGCTTTCTGAAACGCATTTGAAATA--TAAG-------TTTGTTG---TT-------------GAAACTGAGTAA--------------------------------------TG----ATTGATTTTTCAGCCCTCGC------GCAATCTAACCATTGATATAAACGATGGCCCAGCCACGCCGCTGCGCCAATTTGGSizeHit CountTotal NormTotal
No Reads
droTak1
CTAACCAGAGTACGCCGAAAAAGAA---------------------GCAGAGCCAGCGGTTTACGACCAAGGTAGAGATATTTGTTGACAACCCCTAAAAGGTTA-AGGCTTTC-------------------GCT------TGCATCT-----------------CC----GACATTGTAA--CT------CC-----TGTAAATA----------------GCCACTTTC-------AC-----A------------------------------------------------------CTGT-------------------------AC--ACTCATCCA----TTTTCGATACGCATTTGAAATA--TACT-CGTAAGATTGTTG---TT-------------GAAACTGAGTAA--------------------------------------TG----ATTCGTCTTTCAGCCCTCGC------GCAATCTAACCATTGATATAAACGATGGCCCAGCCACGCCGTTGCGTTCGTTTGGSizeHit CountTotal NormTotal
No Reads
droEug1
CTAACCAAAGCACTCCGAAAAAGAA---------------------GCAGATACAGCGGTTTACAACCAAGGTAGAAATTTTTGTTGACTCCCACTA-GAAATTA-AGGCTTTC-------------------GCT------TCTGT-------------------CC----GACATTGTAA--AT------CT-----TGTACATA----------------GCCACTATC-------AC-----A------------------------------------------------------CTGT-------------------------AC----TCATTCATGGCTTTTCAAAATGCATTTCAAATA--TAAT-------TTTGTTG---TT-------------GAAAATGAGTAA--------------------------------------TG----ATTAATTTTTCAGCCATCGC------GAAATCTAACCATTGATGTAAACGATGGCCCAGCCACTTCGTTGCGCCAATATGGSizeHit CountTotal NormTotal
No Reads
dm3
CCAACCAGAGTACGCCGAAAAAGAA---------------------GCAGAGCCAGCGCTTTACAACCAAGGTAGAGATTTTTGTTGACTCCCACTA-AAGCTTA-AGGCTTCC-------------------GCT------TGCATCTGATT-------T-----CT----GACACTGTAC--AT------TC-----TGTAAATA----------------GCCACTACC-------AC-----A------------------------------------------------------CTGT-------------------------AC----TCATCCATCGCTTTCTGAAACGCACTTCAAATA--TAAG-------ATTGTTG---TT-------------GAAACTGAGTAA--------------------------------------TG----ATTGATCTTTCAGCCCGCTT------CCAATTTGACCATAGAAATTAATGATGGCCAAGCCACGTCGCTGCG---------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................GTAA--------------------------------------TG----ATTGATCTTTCAG....................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................G---TT-------------GAAACTGAGTAA--------------------------------------TG----ATT..............................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000
.................................................................ACCAAGGTAGAGATTTTTGTTGACTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCGCTT------CCAATTTGACCATAGA.......................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CGCCGAAAAAGAA---------------------GCAGAGCCAGCGCTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................TA--TAAG-------ATTGTTG---TT-------------GAAACTGAG................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................TA--TAAG-------ATTGTTG---TT-------------GAAACTGAGT...............................................................................................................................2512.0020000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................................................................................................................................................................................................................................................................................TA--TAAG-------ATTGTTG---TT-------------GAAACT...................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................T-----CT----GACACTGTAC--AT------TC-----TGTAAATA----------------GC...............................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....CAGAGTACGCCGAAAAAGAA---------------------GCAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTAATGATGGCCAAGCCACGTCG..............2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTGACCATAGAAATTAATGATGGC..........................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................CTTCC-------------------GCT------TGCATCTGATT-------T-----CT----GACA................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CCAGAGTACGCCGAAAAAGAA---------------------GCAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TG---TT-------------GAAACTGAGTAA--------------------------------------TG----ATTG.............................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
...................................................................................................................................................................................TAC--AT------TC-----TGTAAATA----------------GCCACTACC-------AC-----A------------------------------------------------------...................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GCCGAAAAAGAA---------------------GCAGAGCCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................ATCGCTTTCTGAAACGCACTTC....................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................TCTGATT-------T-----CT----GACACTGTAC--AT------TC-----TGT......................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................TAAG-------ATTGTTG---TT-------------GAAAG....................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................C-----TGTAAATA----------------GCCACTACC-------AC-----A------------------------------------------------------CTGT-------------------------......................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................TA--TAAG-------ATTGTTG---TT-------------GAAACTG..................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................AACGCACTTCAAATA--TAAG-------ATTGTTG---T.......................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAATGATGGCCAAGCCACGTCGCTGC..........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................TACC-------AC-----A------------------------------------------------------CTGT-------------------------AC----TCATCCATCGCT....................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................CCACTACC-------AC-----A------------------------------------------------------CTGT-------------------------AC----TCATCCAT........................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................CGCTTTCTGAAACGCACTTCAAATA--.............................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATGATGGCCAAGCCACGTCGCTGC..........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATGATGGCCAAGCCACGTCGCTG...........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................TTCAAATA--TAAG-------ATTGTTG---TT-------------GAAA.....................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................GCAGAGCCAGCGCTTTACAACCAAGGTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................TTTTGTTGACTCCCACTA-AAGCTTA-A.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................GACACTGTAC--AT------TC-----TGTAAATA----------------GCCACTACC-------AC-----A------------------------------------------------------C..................................................................................................................................................................................................................................................3511.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGATGGCCAAGCCACGTCG..............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAATGATGGCCAAGCCACGTCGCT............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................................................................................................................................TGCATCTGATT-------T-----CT----GACACTGTAC--A.......................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTAATGATGGCCAAGCCACGTCG..............2511.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................AT------TC-----TGTAAATA----------------GCCACTACC-------AC-----A------------------------------------------------------CTG................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................T------TGCATCTGATT-------T-----CT----GACACTGTA...........................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................T-----CT----GACACTGTAC--AT------TC-----TG.......................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................ACTA-AAGCTTA-AGGCTTCC-------------------GCT------TGCATC............................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................AAATA--TAAG-------ATTGTTG---TT-------------GAAACTG..................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AAGAA---------------------GCAGAGCCAGCGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.....................................................................................................................................................................................................................................................................................................................................................................GCACTTCAAATA--TAAG-------ATTGTTG---TT-------------G........................................................................................................................................2611.0010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................ACC-------AC-----A------------------------------------------------------CTGT-------------------------AC----TCATCCATCGCT....................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................TGTTG---TT-------------GAAACTGAGTAA--------------------------------------TG----ATT..............................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TACGCCGAAAAAGAA---------------------GCAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................TACAACCAAGGTAGAGATTTTTGTTGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................TGCATCTGATT-------T-----CT----GACACTGTAC--........................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT------CCAATTTGACCATAGAAATTAAT................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AAAGAA---------------------GCAGAGCCAGCGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................CACTTCAAATA--TAAG-------ATTGTTG---........................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................TTCAAATA--TAAG-------ATTGTTG---TT-------------G........................................................................................................................................2211.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAAATTAATGATGGCCAAGCCACGTCG..............2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................TTCC-------------------GCT------TGCATCTGATT-------T-----CT----GACAC...............................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................TTCAAATA--TAAG-------ATTGTTG---TT-------------GA.......................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................TTGTTG---TT-------------GAAACTGAGTAA--------------------------------------TG----ATTGA............................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................................TCCATCGCTTTCTGAAACGCACTTC....................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......AGAGTACGCCGAAAAAGAA---------------------GCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................TA--TAAG-------ATTGTTG---TT-------------GAAAAA...................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................TACAACCAAGGTAGAGATTTTTGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAATTAATGATGGCGT........................18100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................TAAG-------ATTGTTG---TT-------------GAAAAAA..................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
droSim2
CCAACCAGAGTACGCCGAAAAAGAA---------------------GCAGAGCCAGCGCTTTACAACCAAGGTAGAGATTTTTGTTGACTCCCACTA-AAGCTTA-AGGCTTCC-------------------GCT------TGCATCTGATTTCTGACAT-----CT----GACACTGTAA--AT------CC-----TGTAAATA----------------GACACTACC-------AC-----G------------------------------------------------------CTGT-------------------------AC----TCATCTAAAGCTTTCTGAAACGCACTTCAAATA--TAAG-------ATTGTTG---TT-------------GAAACTGAGTAA--------------------------------------TG----ATTGATCTTTCAGCCCGCTT------CCAATTTGACCATAGAAATTCATGATGGCCAAGCCACGTCGCTGCGCCAGTTTGGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................................................................................................................................................................................................................................................................................................................TTCAAATA--TAAG-------ATTGTTG---TT-------------GAAAC....................................................................................................................................2611.00100000001000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGTAA--------------------------------------TG----ATTGATCTTTC......................................................................2111.00100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATGGCCAAGCCACGTCGCTGCGCC.......2611.00100000000001000000
.............................................................................................................................................................................ACACTGTAA--AT------CC-----TGTAAATA----------------GACACTA..........................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACCATAGAAATTCATGATGGCCAA.......................2611.00100000000000010000
.....................................................................................................................................................................................................................................................................................................................................................TAAAGCTTTCTGAAACGCACTTCAAA.................................................................................................................................................................................2611.00100000010000000000
......................................................AGCGCTTTACAACCAAGGTAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................TTGTTG---TT-------------GAAACTGA.................................................................................................................................1690.22200000000011000000
................................................................................................................................................................................................................................................................................................................................................................................................TGTTG---TT-------------GAAACTGA.................................................................................................................................1590.11100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................TTGTTG---TT-------------GAAACTG..................................................................................................................................15100.10100000000001000000
droSec2
CCAACCAGAGTACGCCGAAAAAGAA---------------------GCAGAGCCAGCGCTTTACAACCAAGGTAGAGATTTTTGTTGACTCCCACTA-AAGCTTA-AGGCTTCC-------------------GCT------TGCATCTGATTTCTGACAT-----CT----GACACTGTAA--AT------CC-----TGTAAATA----------------GACACTACC-------AC-----G------------------------------------------------------CTGT-------------------------AC----TCATCTAAAGCTTTCTGAAACACACTTCAAATA--TAAG-------ATTGTTG---TT-------------GAAACTGAGTAA--------------------------------------TG----ATTGATCTTTCAGCCCGCTT------CCAATTTGACCATAGAAATTCATGATGGCCAAGCCACGTCGCTGCGCCATTTGGGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................................GTAGAGATTTTTGTTGACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001
.........................................................................................................................................................................................................................................................................................................................................................................................................T-------------GAAACTGAGTAA--------------------------------------TG----ATTG.............................................................................1911.0010010
droYak3
CTAACCAGAGCACTCCGAAAAAGAA---------------------GCAGAACCAGCGGTTTACAACCAAGGTAGAGATATTTGTTGACTCCCACTA-GAGCTTA-AGGCTTCC-------------------GCTTCCGCTAGCATCTGACATTTGACAT-----CT----GACACTGCAA--AT------CC-----TGTACATA----------------GCCACTATC-------AC-----A------------------------------------------------------CTGT-------------------------AC----TCATCCAAAGCTATCTGAAACGCACTACAAATA--TAAG-------ATTGTTG---TT-------------GAAACTGAGTAA--------------------------------------TG----ATTGATCTTTCAGCCCGCTC------CCAATTTGACCATTGAAATTAATGATGGCCAAGCCACGTCGCTGCGCCATTTTGGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................CAAAGCTATCTGAAACGCACT......................................................................................................................................................................................2111.00101000000000
droEre2
CTAACCAGAGCACACCGAAAAAGAA---------------------GCAGAGCCAGCGGTTCACAACCAAGGTAGAGATATTTGTTGACTCCCACTA-GAGCTTA-AGGCTTTC-------------------GCT------TGCATCTG-------ACAT-----CT----GCCACTGTAA--AT------CT-----TGTAAATA----------------GCCACTATC-------AC-----A------------------------------------------------------CTGT-------------------------AC----TCATCCAAAGCTTTCTGA-ACGCACTTCAAATA--TAAG-------ATTGTTG---TT-------------GAAACTGAGTAA--------------------------------------TG----ATTGATCTTTCAGCCCGCTC------CCAATTTGACCATTGAAATTAATGATGGCCAAGCCACGTCACTGCGCCATTTTGGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAAATTAATGATGGCCAAGCCACGT................2811.0010000100

Generated: 05/16/2015 at 11:22 PM