ID:

dvi_4797

 Coordinate:

scaffold_12875:949808-949958 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-36.1 -35.9

Flybase annnotation

exon [dvir_GLEANR_6615:1]; CDS [Dvir\GJ21242-cds]; intron [Dvir\GJ21242-in]

Repeatable elements

NameClassFamilyStrand
(TG)nSimple_repeatSimple_repeat+
mature
star
  1. scaffold_12823:1250492-1250512 +
  2. scaffold_12823:2367801-2367821 +
  3. scaffold_12855:917215-917235 +
  4. dvi_4797  scaffold_12875:949932-949952 +
  5. scaffold_12875:2038301-2038321 +
  6. scaffold_12875:3742269-3742289 +
  7. scaffold_12875:12924939-12924959 +
  8. scaffold_12875:13258345-13258365 +
  9. scaffold_12932:97608-97628 +
  10. scaffold_12963:3084940-3084960 +
  11. scaffold_12963:4423133-4423153 +
  12. scaffold_12963:12806273-12806293 +
  13. scaffold_12963:14413769-14413789 +
  14. scaffold_13042:2789716-2789736 +
  15. scaffold_13047:626699-626719 +
  16. scaffold_13047:11796615-11796635 +
  17. scaffold_13047:18593826-18593846 +
  18. scaffold_13049:6221996-6222016 +
  19. scaffold_13049:9296320-9296340 +
  20. scaffold_13246:1158759-1158779 +
  21. scaffold_12726:2306272-2306292 +
  22. scaffold_12822:2573406-2573426 +
  23. scaffold_12855:7501451-7501471 +
  24. scaffold_12963:7037133-7037153 +
  25. scaffold_13042:962866-962886 +
  26. scaffold_13042:1564656-1564676 +
  27. scaffold_13042:1902734-1902754 +
  28. scaffold_13042:2763902-2763922 +
  29. scaffold_13042:3260772-3260792 +
  30. scaffold_13042:3487341-3487361 +
  31. scaffold_13047:14236675-14236695 +
  32. scaffold_13049:6928708-6928728 +
  33. scaffold_12472:98051-98071 +
  34. scaffold_12822:4073811-4073831 +
  35. scaffold_12823:1686545-1686565 +
  36. scaffold_12875:4332515-4332535 +
  37. scaffold_12875:14840292-14840312 +
  38. scaffold_12928:5166819-5166839 +
  39. scaffold_12963:7037757-7037777 +
  40. scaffold_12963:13250459-13250479 +
  41. scaffold_12963:14606501-14606521 +
  42. scaffold_12963:18386295-18386315 +
  43. scaffold_12970:2617335-2617355 +
  44. scaffold_13042:2763866-2763886 +
  45. scaffold_13042:3256054-3256074 +
  46. scaffold_13047:12696454-12696474 +
  47. scaffold_13047:18005815-18005835 +
  48. scaffold_13049:6928556-6928576 +
  49. scaffold_13246:2020429-2020449 +
  50. scaffold_13246:2022169-2022189 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTGAAGGCGCTACAGATGTTGTGCTAGAGGCTCAGACCATGGACGTAGAGGTAAGCGAAACGGCGAGGCAAAAGGATTTCGAACAGCTAAACAAGAAACATTGATTTTTAAGACAAAAGGTCAAACAATAAATTGTCAACGCTGAAATATGATACACATACAAACGTACATTTGTATGTATGTATGTGTGTGTGTGTGCGTGTGTGTTCCTAGCTAATTGCGCAGTTTCAGTGGGCGCGATCGCGGTGTCC
*********************************************************...(((((.(((((.....((((..............))))..(((((((((......)))))))))........)))))..))))).......(((((((((((.((((((((....)))))))).)))))))))))******************************************************** 		Read size # Mismatch Hit Count Total Norm Total M027
male body		 V116
male body		 M047
female body
 SRR060658
140_ovaries_total
 SRR060659
Argentina_testes_total
 V047
embryo
 SRR060679
140x9_testes_total
 SRR060680
 9xArg_testes_total
 GSM1528803
follicle cells		 M028
head
 M061
embryo
 SRR060684
140x9_0-2h_embryos_total
 SRR060662
9x160_0-2h_embryos_total
 SRR060655
9x160_testes_total
 SRR060657
140_testes_total
 SRR060660
Argentina_ovaries_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060663
160_0-2h_embryos_total
 SRR060664
9_males_carcasses_total
 SRR060667
160_females_carcasses_total
 SRR060668
160x9_males_carcasses_total
 SRR060670
9_testes_total
 SRR060671
9x160_males_carcasses_total
 SRR060674
9x140_ovaries_total
 SRR060681
Argx9_testes_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060687
9_0-2h_embryos_total
 SRR060688
160_ovaries_total
 SRR1106727
larvae
 SRR1106730
embryo_16-30h
 SRR060678
9x140_testes_total
 SRR1106729
mixed whole adult body
 V053
head
 SRR060683
160_testes_total
 SRR060665
9_females_carcasses_total
 SRR060676
9xArg_ovaries_total
 SRR060677
Argx9_ovaries_total
 SRR1106728
larvae
........GCTACAGATGTTGTGCTAGA............................................................................................................................................................................................................................... 20 0 1 3.00 3 0 0 1 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................TAGAGGCTCAGACCATGGACGT............................................................................................................................................................................................................. 22 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........ACAGATGTTGTGCTAGAGGCT........................................................................................................................................................................................................................... 21 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................GTTTCAGTGGGCGCGATCGCGGTGTCC 27 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................GGCTCAGACCATGGACGT............................................................................................................................................................................................................. 18 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............CAGATGTTGTGCTAGAGGCTCAGACCATG.................................................................................................................................................................................................................. 29 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............AGATGTTGTGCTAGAGGCT........................................................................................................................................................................................................................... 19 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........ACAGATGTTGTGCTAGAGG............................................................................................................................................................................................................................. 19 0 1 2.00 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................ACCATGGACGTAGAGGTAAGC................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................TGTGCTAGAGGCTCAGACCATGGA................................................................................................................................................................................................................ 24 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................CAGACCATGGACGTAGAGGTT...................................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................GTTGTGCTAGAGGCTCAGACC..................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
CTGAAGGCGCTACAGATGTTG...................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................AGGCTCAGACCATGGACG.............................................................................................................................................................................................................. 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.............................GCTCAGACCATGGACGTA............................................................................................................................................................................................................ 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............AGATGTTGTGCTAGAGGCTCAGA....................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................AGAGGCTCAGACCATGGACGTAGA.......................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............CAGATGTTGTGCTAGAGGCTCA......................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
............................GGCTCCGACCGTGGACGTTGA.......................................................................................................................................................................................................... 21 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................AAACGGCGAGGCAAAAGGATT............................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................GTCGTGCTAGAGGCTGAGACTATGGAC............................................................................................................................................................................................................... 27 3 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............CAGATGTTGTGCTAGAGG............................................................................................................................................................................................................................. 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................GCGCAGTTTCAGTGGGCGCGAT.......... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................AACGGCGAGGCAAAAGGAT.............................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................ACCATGGACGTAGAGGTAAG.................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................CTAGAGGCTCAGACCATGGACGTAGAG......................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................GCTAGATGCTCAGACCATGGACGTA............................................................................................................................................................................................................ 25 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........TACAGATGTTGTGCTAGAGGCTCA......................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............CAGATGTTGTGCTAGAGGCTC.......................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............ATGTTGTGCTAGAGGCTCAGACCATG.................................................................................................................................................................................................................. 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................TTGTGCTAGAGGCTCAGAC...................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............AGATGTTGTGCTAGAGGCTCAGACCATA.................................................................................................................................................................................................................. 28 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................TGTTGTGCTAGAGGCTCAGAC...................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................TGTGCTAGAGGCTCAGACCAT................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............ATGTTGTGCTAGAGGCTCAGA....................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................TGTGCTAGAGGCTCAGACCATGGACTT............................................................................................................................................................................................................. 27 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................GCTCAGACCATGGACGTAGAGGTA...................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................AGGCTCAGACCATGGACGTAGAGGTAA..................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................ATGGACGTAGAGGTAAGCGT................................................................................................................................................................................................. 20 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................TTGTGCTAGAGGCTCAGACCATGGA................................................................................................................................................................................................................ 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........ACGGATGTTGTGCTGGAGGCT........................................................................................................................................................................................................................... 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............ATGTTGTGCTAGAGGCTCA......................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................GCTAGAGGCTCAGACCATGGACGT............................................................................................................................................................................................................. 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................AATTGCGCAGTTTCAGTGGGC............... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................GGTAAGCGAAACGGCGAG........................................................................................................................................................................................ 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........TACAGATGTTGTGCTAGAGGCT........................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...........ACAGATGTTGTGCTAGAG.............................................................................................................................................................................................................................. 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................GTTGTGCTAGAGGCTCAGACCATGGACG.............................................................................................................................................................................................................. 28 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................AGTGGGCGCGATCGCGGTGTC. 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................CGTAGAGGTGAGCGAGACGGC........................................................................................................................................................................................... 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...........ACAGATGTTGTGCTAGAGGCTCAGAC...................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................TTGTGCTAGAGGCTCAGACCATGGAC............................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TATGTATGTATGTGTGTGTGT........................................................ 21 0 20 0.55 11 0 0 0 8 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TTTGTATGTATGTATGTGTGTG........................................................... 22 0 4 0.50 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0
........................................................................................AAACAAGAACCATGGATTT................................................................................................................................................ 19 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................TGTGTGTGCGTGTGTGTTCC......................................... 20 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................GTGTGATCCTGGTTAATTGC.............................. 20 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.............................................................................................................................................................................GTATGTATGTATGTGTGT............................................................ 18 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0
..................................................................CGCAAAAGGATTCCGAA........................................................................................................................................................................ 17 2 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1
...............................................................................................................................................................................................GTGTGTGCGTGTGTGTTC.......................................... 18 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0
.......................CTAGAGGCGTAGACGATGG................................................................................................................................................................................................................. 19 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................TTTGTGTGTGTGTGCGTGTGTGTTC.......................................... 25 1 14 0.07 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................AGAGAAAAGGTCAAACAAG.......................................................................................................................... 19 2 16 0.06 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................GTGTGTGTGTGCGTGTGT.............................................. 18 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................TGTATGTATGTATGTGTGTGT.......................................................... 21 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.................................................................................................................................................................................GTATGTAAGTGTGTGTGTGTGCGTT................................................. 25 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.................GTAGTGCTAGAGGCTCCC........................................................................................................................................................................................................................ 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.......................................................................................................................................................................................ATGTGTGTGTGTGTGCGTGTG............................................... 21 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.........................................................................................................................................................................................................................................GGCGCGATCGCGGATGCC 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
................................................................................................................................................................................TGTATGTATGTGTGTGTG......................................................... 18 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TATGTATGTATGTGTGTGTGTGTG..................................................... 24 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................TATGTATGTGTGTGTGTGT...................................................... 19 0 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

GACTTCCGCGATGTCTACAACACGATCTCCGAGTCTGGTACCTGCATCTCCATTCGCTTTGCCGCTCCGTTTTCCTAAAGCTTGTCGATTTGTTCTTTGTAACTAAAAATTCTGTTTTCCAGTTTGTTATTTAACAGTTGCGACTTTATACTATGTGTATGTTTGCATGTAAACATACATACATACACACACACACACGCACACACAAGGATCGATTAACGCGTCAAAGTCACCCGCGCTAGCGCCACAGG
********************************************************...(((((.(((((.....((((..............))))..(((((((((......)))))))))........)))))..))))).......(((((((((((.((((((((....)))))))).)))))))))))********************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR060681
Argx9_testes_total
 SRR060678
9x140_testes_total
 SRR060670
9_testes_total
 SRR060675
140x9_ovaries_total
 SRR060679
140x9_testes_total
 V116
male body		 M047
female body
...................................................ATTCGCTTTGCCGCTCCGTTT................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0
....................................................................GTTTTCCTAAAGCTTGTCGAT.................................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0
................................................................CTCCGTTTTCCTAAAGCTTGT...................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
........................................CCTGCATCTCCATTCGCTTTG.............................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0
................................GTCTGGTACCTGCATCTCCAT...................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
...................ACACGATCTCCGAGTCTGGTA................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0
..................................................................................................................................................................................................................ATCGATTAACGCGTCAAAGTCA................... 22 0 1 1.00 1 1 0 0 0 0 0 0
....................CACGATCTCCGAGTCTGGTAC.................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0
............................................................................AAAGCTTGTCGATTTGTTCTT.......................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0
.......................................................................................ATTTGTTCTTTGTATCTA.................................................................................................................................................. 18 1 3 0.33 1 0 0 0 0 0 0 1
....................................................................................................AAATAAAAATTCTGTCTTCCT.................................................................................................................................. 21 3 16 0.06 1 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12875:949758-950008 + dvi_4797 CTGAAGGCGCTACAGATGTTGTGCTAGAGGCTCAGACCATGGACGTAGAGGTAAGCGAAAC-GGCGAGGCAAAAGGATTTCGAACAGCTAAACAAGAAACATTGATTTTTAAGACAA-------------AAGG-T-C-------------------------AAACAATAAATTGT-------------------CAACGCTGAAATATGA-------TACACATACAAACGTACATTTGTATGTATGTATGTGT----------------GTGTGTGTGCGTGTGTGTTCCTAGCTAATTGCGCAGTTTC--AGTGGGCGCGATCGCGGTGTCC
droMoj3 scaffold_6496:3987429-3987701 + CCGAAGGCCCTGCAGATGCTCCGCTAGAGGCTCGGTCAATGGACGTTGAGGTAAGCGAAAC-GAGAACGAAAAAGGATTTTGAATGAC-------------------TTTGACACAA--TTAAAGCCACAAAGG-T-C-------------------------AAACAATAAGCTCT------GAATGCTTAGAAATATGATATACAC--ATGTGTGTGCATATATACAAACTTACAAATCTATATATATATATACATTCTAACATACATCAATGCATATGTATGTAT----GTAATTAAATGCGCAGTTTC--TGTGGGCGCGATCATTGTGTCC
droGri2 scaffold_15245:10017334-10017569 - CCATAGGCGCTGCAGATGTTCTCGCCGAAGATCCGACTATGGATGTAGAGGTAAGCCAAATTAAGGACGCTCAAGGATCTCGTCGCAATAAATGACAAACATTGATTTTT-CTATAAAAA--------AAAAAAATGGACACAGGCTTTATTTTATCACCTAGCAACCACCAAATGA-------------------CAACACTAAAATGTGA-------TATGAAT-------------------------------------------------------------T----GTAGTTAATTGCGCAGTTTAAATGTGGACGCGATCGCTGCGCCC
droWil2 scf2_1100000004909:8173667-8173824 - GA-------------------------------------------------TAAACAAAAT------------------CTGAACTAATAAACAA---ATAAAAACATTG-CGAAAAAAA--------GAAAAA-T-GAAACAGCATTTG---C---------------AAAGCTTT------ATGAACAGAGGGGAAACACAT--------------------GTACGTGTGTGTGTGTGTGTGTGTGTGTGTGT----------------GTGTGTGTGTGTGTGTGC--TTATCTAAT-----------------------------------
dp5 XR_group8:4234898-4234976 - TGAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAC-------------------TAAACCTTAAATATTG-------TACATGTACATACGTATGTATGTATGTGTGGGTGTGT----------------GTGTGTGTGTGTGTGTGT----------------------------------------------
droPer2 scaffold_38:685743-685882 - AAGC----------------------------------------------------GAAAA-GGCCAGGAAAAAGAA----------CCAAACCAAATACATTAAAATTCCATTAAA-------------AAGG-C-G---------------------------ACACTCCACTCTTCACATATG-----AGAGGCAGG------------------------ATACGAGTGTGTGTGTGTGTGTGTGTGTGTGT----------------GTGTGTGTGTGTGTGTGT----------------------------------------------
droEle1 scf7180000491255:2846313-2846373 - ATGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT-------TACATTTACAAACGTACATTTATATGTGTGTGTGGGT----------------GTGTGTATGTGTGTGTGT----------------------------------------------
droBia1 scf7180000302088:455196-455298 - ATATTTA--------------------------------------------------------------------------------------------------------ACTCGA-------------TAGA-T-T-------------------------TGATCATACACATA-------------------TAATGCAAAAATAT-A-------TATATATATATATATATATATATATGTGTGTGTGTGT----------------GTGTGTGTGTGTGTGTGT----------------------------------------------
droYak3 X:6656007-6656094 - GAAAAAAAGCCAAAGTT-------------------------------------------------------------------------------------------------------------------------------------------------------------TGT-------------------CAACGCTGAAATCGGT-------AATATATATATATATATATATGTATGTATA--------------------------TATGTGTGAGTGTGT---------------------------------------GAGGGCG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
CTGAAGGCGCTACAGATGTTGTGCTAGAGGCTCAGACCATGGACGTAGAGGTAAGCGAAAC-GGCGAGGCAAAAGGATTTCGAACAGCTAAACAAGAAACATTGATTTTTAAGACAA-------------AAGG-T-C-------------------------AAACAATAAATTGT-------------------CAACGCTGAAATATGA-------TACACATACAAACGTACATTTGTATGTATGTATGTGT----------------GTGTGTGTGCGTGTGTGTTCCTAGCTAATTGCGCAGTTTC--AGTGGGCGCGATCGCGGTGTCCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........GCTACAGATGTTGTGCTAGA....................................................................................................................................................................................................................................................................................................................2013.003001000000000000000000000000000000010000000000000000000000001000
........................TAGAGGCTCAGACCATGGACGT..................................................................................................................................................................................................................................................................................................2212.002000000010010000000000000000000000000000000000000000000000000000
...........ACAGATGTTGTGCTAGAGGCT................................................................................................................................................................................................................................................................................................................2112.002100000000000000000000000000000000000000000000000000000000000010
...................................................................................................................................................................................................................................................................................................................GTTTC--AGTGGGCGCGATCGCGGTGTCC2712.002200000000000000000000000000000000000000000000000000000000000000
............................GGCTCAGACCATGGACGT..................................................................................................................................................................................................................................................................................................1812.002000000002000000000000000000000000000000000000000000000000000000
............CAGATGTTGTGCTAGAGGCTCAGACCATG.......................................................................................................................................................................................................................................................................................................2912.002000000000000000000000000000000000000000000000000000000000000020
.............AGATGTTGTGCTAGAGGCT................................................................................................................................................................................................................................................................................................................1912.002101000000000000000000000000000000000000000000000000000000000000
...........ACAGATGTTGTGCTAGAGG..................................................................................................................................................................................................................................................................................................................1912.002000000000000000000001000000000000000000000000000000000000000010
...................................ACCATGGACGTAGAGGTAAGC........................................................................................................................................................................................................................................................................................2111.001010000000000000000000000000000000000000000000000000000000000000
...................TGTGCTAGAGGCTCAGACCATGGA.....................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000001000000000000000000000000000000000
................................CAGACCATGGACGTAGAGGTT...........................................................................................................................................................................................................................................................................................2111.001000000000000000000000000100000000000000000000000000000000000000
.................GTTGTGCTAGAGGCTCAGACC..........................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
CTGAAGGCGCTACAGATGTTG...........................................................................................................................................................................................................................................................................................................................2111.001000000001000000000000000000000000000000000000000000000000000000
...........................AGGCTCAGACCATGGACG...................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000010000000
.............................GCTCAGACCATGGACGTA.................................................................................................................................................................................................................................................................................................1811.001000000000000000000100000000000000000000000000000000000000000000
.............AGATGTTGTGCTAGAGGCTCAGA............................................................................................................................................................................................................................................................................................................2311.001100000000000000000000000000000000000000000000000000000000000000
.........................AGAGGCTCAGACCATGGACGTAGA...............................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
............CAGATGTTGTGCTAGAGGCTCA..............................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000010000000000000000000000000
.........................................................AAAC-GGCGAGGCAAAAGGATT.................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
............CAGATGTTGTGCTAGAGG..................................................................................................................................................................................................................................................................................................................1811.001000000000000100000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................GCGCAGTTTC--AGTGGGCGCGAT..........2211.001100000000000000000000000000000000000000000000000000000000000000
..........................................................AAC-GGCGAGGCAAAAGGAT..................................................................................................................................................................................................................................................................1911.001000000001000000000000000000000000000000000000000000000000000000
...................................ACCATGGACGTAGAGGTAAG.........................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
.......................CTAGAGGCTCAGACCATGGACGTAGAG..............................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000001
..........TACAGATGTTGTGCTAGAGGCTCA..............................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000001000
............CAGATGTTGTGCTAGAGGCTC...............................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000100000000000000000000000000000000
...............ATGTTGTGCTAGAGGCTCAGACCATG.......................................................................................................................................................................................................................................................................................................2611.001000000000001000000000000000000000000000000000000000000000000000
..................TTGTGCTAGAGGCTCAGAC...........................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000010000000000000000000000000000000
.............AGATGTTGTGCTAGAGGCTCAGACCATA.......................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000000010
................TGTTGTGCTAGAGGCTCAGAC...........................................................................................................................................................................................................................................................................................................2111.001000000000100000000000000000000000000000000000000000000000000000
...................TGTGCTAGAGGCTCAGACCAT........................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
...............ATGTTGTGCTAGAGGCTCAGA............................................................................................................................................................................................................................................................................................................2111.001000001000000000000000000000000000000000000000000000000000000000
.............................GCTCAGACCATGGACGTAGAGGTA...........................................................................................................................................................................................................................................................................................2411.001100000000000000000000000000000000000000000000000000000000000000
...........................AGGCTCAGACCATGGACGTAGAGGTAA..........................................................................................................................................................................................................................................................................................2711.001100000000000000000000000000000000000000000000000000000000000000
......................................ATGGACGTAGAGGTAAGCGT......................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000100000000000000000000000000000000
..................TTGTGCTAGAGGCTCAGACCATGGA.....................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000010
...............ATGTTGTGCTAGAGGCTCA..............................................................................................................................................................................................................................................................................................................1911.001000000000000010000000000000000000000000000000000000000000000000
......................GCTAGAGGCTCAGACCATGGACGT..................................................................................................................................................................................................................................................................................................2411.001000000000100000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................AATTGCGCAGTTTC--AGTGGGC...............2111.001000000000000000000000000000000000000000000000000000000000000010
.................................................GGTAAGCGAAAC-GGCGAG............................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
..........TACAGATGTTGTGCTAGAGGCT................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000010000
...........ACAGATGTTGTGCTAGAG...................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000100000000000000000000000000000000000000000
.................GTTGTGCTAGAGGCTCAGACCATGGACG...................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000000001
..........................................................................................................................................................................................................................................................................................................................AGTGGGCGCGATCGCGGTGTC.2111.001000000000100000000000000000000000000000000000000000000000000000
...........ACAGATGTTGTGCTAGAGGCTCAGAC...........................................................................................................................................................................................................................................................................................................2611.001100000000000000000000000000000000000000000000000000000000000000
..................TTGTGCTAGAGGCTCAGACCATGGAC....................................................................................................................................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................TATGTATGTATGTGT----------------GTGTGT..........................................................21200.5511000000008000100000000000000000000020000000000000000000000000000
.............................................................................................................................................................................................................................................TTTGTATGTATGTATGTGT----------------GTG.............................................................2240.502000000000000000000000000000020000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................TGTGTGTGCGTGTGTGTTCC...........................................2040.251000000000100000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................GTATGTATGTATGTGT----------------GT..............................................................18200.102000000000000000000000000000010000100000000000000000000000000000
..................................................................................................................................................................................................................................................................................GTGTGTGCGTGTGTGTTC............................................18200.102000000000000000000000000000000000200000000000000000000000000000
..............................................................................................................................................................................................................................................................GT----------------GTGTGTGTGCGTGTGT................................................18200.051000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................................................TGTATGTATGTATGTGT----------------GTGT............................................................21200.051000000000000000000000000001000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................ATGTGT----------------GTGTGTGTGCGTGTG.................................................21200.051000000000000000000000000000000000100000000000000000000000000000
...................................................................................................................................................................................................................................................TGTATGTATGTGT----------------GTGTG...........................................................18200.051001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................TATGTATGTATGTGT----------------GTGTGTGTG.......................................................24200.051000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................................................................................TATGTATGTGT----------------GTGTGTGT........................................................19200.051000000000000000000000000000000100000000000000000000000000000000
droMoj3
CCGAAGGCCCTGCAGATGCTCCGCTAGAGGCTCGGTCAATGGACGTTGAGGTAAGCGAAAC-GAGAACGAAAAAGGATTTTGAATGAC-------------------TTTGACACAA--TTAAAGCCACAAAGG-T-C-------------------------AAACAATAAGCTCT------GAATGCTTAGAAATATGATATACAC--ATGTGTGTGCATATATACAAACTTACAAATCTATATATATATATACATTCTAACATACATCAATGCATATGTATGTAT----GTAATTAAATGCGCAGTTTC--TGTGGGCGCGATCATTGTGTCCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............CAGATGCTCCGCTAGAGG..................................................................................................................................................................................................................................................................................................................1811.001100000
...........GCAGATGCTCCGCTAGAGGCTCGGT............................................................................................................................................................................................................................................................................................................2511.001100000
..............................CTCGGTCAATGGACGTTGAGGT............................................................................................................................................................................................................................................................................................2211.001100000
..................................GTCAATGGACGTTGAGGTAAGC........................................................................................................................................................................................................................................................................................2211.001010000
.........CTGCAGATGCTCCGCTAGAGGCTCG..............................................................................................................................................................................................................................................................................................................2511.001000100
..................................GTCAATGGACGTTGAGGTAAGCGA......................................................................................................................................................................................................................................................................................2411.001000001
.............................GCTCGGTCAATGGACGTTGAGG.............................................................................................................................................................................................................................................................................................2211.001100000
...................TCCGCTAGAGGCTCGGTCAATGGACG...................................................................................................................................................................................................................................................................................................2611.001000001
.....................CGCTAGAGGCTCGGTCAAT........................................................................................................................................................................................................................................................................................................1911.001100000
droGri2
CCATAGGCGCTGCAGATGTTCTCGCCGAAGATCCGACTATGGATGTAGAGGTAAGCCAAATTAAGGACGCTCAAGGATCTCGTCGCAATAAATGACAAACATTGATTTTT-CTATAAAAA--------AAAAAAATGGACACAGGCTTTATTTTATCACCTAGCAACCACCAAATGA-------------------CAACACTAAAATGTGA-------TATGAAT-------------------------------------------------------------T----GTAGTTAATTGCGCAGTTTAAATGTGGACGCGATCGCTGCGCCCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
GA-------------------------------------------------TAAACAAAAT------------------CTGAACTAATAAACAA---ATAAAAACATTG-CGAAAAAAA--------GAAAAA-T-GAAACAGCATTTG---C---------------AAAGCTTT------ATGAACAGAGGGGAAACACAT--------------------GTACGTGTGTGTGTGTGTGTGTGTGTGTGTGT----------------GTGTGTGTGTGTGTGTGC--TTATCTAAT-----------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
dp5
TGAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAC-------------------TAAACCTTAAATATTG-------TACATGTACATACGTATGTATGTATGTGTGGGTGTGT----------------GTGTGTGTGTGTGTGTGT----------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................................................................................................................................................................................................................TACGTATGTATGTATGTGTGGGT....................................................................................2320.5010000001000
droPer2
AAGC----------------------------------------------------GAAAA-GGCCAGGAAAAAGAA----------CCAAACCAAATACATTAAAATTCCATTAAA-------------AAGG-C-G---------------------------ACACTCCACTCTTCACATATG-----AGAGGCAGG------------------------ATACGAGTGTGTGTGTGTGTGTGTGTGTGTGT----------------GTGTGTGTGTGTGTGTGT----------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droEle1
ATGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT-------TACATTTACAAACGTACATTTATATGTGTGTGTGGGT----------------GTGTGTATGTGTGTGTGT----------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
ATATTTA--------------------------------------------------------------------------------------------------------ACTCGA-------------TAGA-T-T-------------------------TGATCATACACATA-------------------TAATGCAAAAATAT-A-------TATATATATATATATATATATATATGTGTGTGTGTGT----------------GTGTGTGTGTGTGTGTGT----------------------------------------------SizeHit CountTotal NormTotal
No Reads
droYak3
GAAAAAAAGCCAAAGTT-------------------------------------------------------------------------------------------------------------------------------------------------------------TGT-------------------CAACGCTGAAATCGGT-------AATATATATATATATATATATGTATGTATA--------------------------TATGTGTGAGTGTGT---------------------------------------GAGGGCGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads

Generated: 05/16/2015 at 10:28 PM