ID:

dvi_4794

 Coordinate:

scaffold_12875:943859-944009 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-3.5 -3.4 -3.2 -3.0

Flybase annnotation

CDS [Dvir\GJ21241-cds]; exon [dvir_GLEANR_6614:2]; intron [Dvir\GJ21241-in]

Repeatable elements

NameClassFamilyStrand
(TG)nSimple_repeatSimple_repeat+

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GCGTTATATAAATGAATAAGAATGCTTATGTGGGCGAACGTAGCATAAAAGTGCATTTATAATCGACACACACATGCGTATTATTTGTGTATACACAAATGCCTATGTGTGTGTGCGTGCGTGTGTGTGTGTCGTGTTGAGTATTTCTAGCCAATTTGTGTGTATGTGTGACTGTTATTTTCCGTGTTGTTGTTCTTACAGCGGAAATCAGTGGACTTTTGCTAGATGAGCAACAGGATATGGACATGGAG
**********************************************************************************************************************************......((..(((........((((.((...(((...........)))....)).)))).......)))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060678
9x140_testes_total
 SRR060681
Argx9_testes_total
 M028
head
 SRR060654
160x9_ovaries_total
 SRR060670
9_testes_total
 SRR060680
 9xArg_testes_total
 V047
embryo
 M027
male body		 SRR060663
160_0-2h_embryos_total
 V116
male body		 GSM1528803
follicle cells		 SRR060667
160_females_carcasses_total
 SRR060657
140_testes_total
 SRR060659
Argentina_testes_total
 SRR060660
Argentina_ovaries_total
 SRR060679
140x9_testes_total
.................................................................................................................................................................................TTTTCCGTGTTGTTGTTCTTACAG.................................................. 24 0 1 2.00 2 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................TATTTGTGTCTGTTATTCTCCGTG................................................................. 24 3 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................TGCTAGATGAGCAACAGGATATGGA....... 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
........TAAATGAATAAGAATGCTTATGTGGGC........................................................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................TGAGCAACAGGATATGGACA..... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................GTCGTGTTGAGTATTTCTAGCCAAT................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................ACAAATGCCTATGTGTGTGTG........................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TTTGCTAGATGAGCAACAGGA............. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................TGCTAGATGAGCAACAGGATATGGACA..... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................CTAGATGAGCAACAGGATATG......... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................CGAACGTAGAGTTAAAGTGC..................................................................................................................................................................................................... 20 3 4 0.25 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...................GATTGGTTATGTGTGCGAAC.................................................................................................................................................................................................................... 20 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...................................GAACGTAGCGTTAAGGTGC..................................................................................................................................................................................................... 19 3 16 0.13 2 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0
.............................................................................................................TGTGTGCGTGCGTGTGTCTCTGTC...................................................................................................................... 24 2 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0
.....................ATGCTGATGAGGGCGAAC.................................................................................................................................................................................................................... 18 2 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................TCGTGCTGTTGTTCGTACAG.................................................. 20 3 12 0.08 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................AGCAGAGATCGGTGGACTT................................. 19 3 15 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.........................................................................................................TGTGTGTGTGCGTGCGTG................................................................................................................................ 18 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
............................................................................................................................................................................................................................CCCAGATGATCAACAGGAT............ 19 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................TGTGCGTGCGTGTGTGTGTG........................................................................................................................ 20 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..................................................................................................................GAGTGCGTGTGTGTGTGACGT.................................................................................................................... 21 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

CGCAATATATTTACTTATTCTTACGAATACACCCGCTTGCATCGTATTTTCACGTAAATATTAGCTGTGTGTGTACGCATAATAAACACATATGTGTTTACGGATACACACACACGCACGCACACACACACAGCACAACTCATAAAGATCGGTTAAACACACATACACACTGACAATAAAAGGCACAACAACAAGAATGTCGCCTTTAGTCACCTGAAAACGATCTACTCGTTGTCCTATACCTGTACCTC
**************************************************......((..(((........((((.((...(((...........)))....)).)))).......)))))********************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060689
160x9_testes_total
 SRR060670
9_testes_total
 SRR060676
9xArg_ovaries_total
 V053
head
 SRR060657
140_testes_total
 SRR060658
140_ovaries_total
 SRR060673
9_ovaries_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060659
Argentina_testes_total
...................................................ACGTAAATATTAGCTGTGTG.................................................................................................................................................................................... 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0
........................................................................GTACGCATAATAAACACATAT.............................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.............................CACCCGCTTGCATCGTATTTT......................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.....................................................................TGTGGAGGCATAATAAACTC.................................................................................................................................................................. 20 3 5 0.40 2 0 0 0 0 1 1 0 0 0
...........TACTTATTCTTTCGACTAAAC........................................................................................................................................................................................................................... 21 3 3 0.33 1 0 0 0 1 0 0 0 0 0
.....................................................GTAAAAATTAGCTGTGTAT................................................................................................................................................................................... 19 2 6 0.17 1 0 0 0 0 0 0 1 0 0
......................................................................................CACCTATGTGGTTACGGGTA................................................................................................................................................. 20 3 6 0.17 1 0 0 0 0 0 0 0 1 0
......................................................................................................................................................................CCACTGGCACTAAAAGGCA.................................................................. 19 3 7 0.14 1 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12875:943809-944059 + dvi_4794 GCGTTATATAAATGAATAAGAATGCTT-ATGTGGGCGAA-CGTAGCATAA-AAGTGCATTTAT---------AATCGACACACACAT--------------------------------------GCGTATTATTTGTGTATACACAAATG---------CCTATGTGTGTGTGCGTGCGTG--TGTGTGT--------------------------------GTCG---------------------------TG---------TTG-----------AGT-ATTTCTAGCCAATTTGTGT----G------------TATGTGTG-------------------ACT----------------------------------------------------GTT---------------------------------------------------------------------ATTTTCC------GTGTTGTTGTTC---TTACAGCGGAAATCAGTGGACTTTTGCTAGATGAGCAACAGGATATG---------GACATGGAG
droMoj3 scaffold_6496:3981174-3981448 + GTATTATATAAACGCATAAGAACTCTT-ATGTGGGCGAG-CATAGCATAA-AAGTGCATTT-----ATAATCTACACACACACATG--CGAACACAAACTCACTAACACATATGTATATATGCTTGCTTCTGATTTGTGTATACAAAAATGTATTT-GCGTATGTGTGTG--CG-----------------------CGCA----------------------------------------------------------------TTG-----------AGTATTTG------------CGT----G------------TATTTGTG-------------------AGA----------------------------------------------------CTC---------------------------------------------------------------------ATTTCAAGTGTTGTTTTTGTTGTTC---TTGCAGCGGAAATAAGTGGACTGTTGTTAGATGAGCAACAGGATATG---------GATATGGAA
droGri2 scaffold_15245:10023367-10023601 - GTATTATATAAATGTGCAGCAGTGCTGATTGTGGGCAAA-CGTAGCATAA-AAATGCATTTAAT---------CCCCACACACACAT----AT--------------------------------GCGTCTGATTTGTGTATACACAAAC---------GTGTGTGTGTG--TG----T--------------------------------------------------------------------------------------GTG-----------GAGTATTTCTAG--------CCT----GTTTGCGTG----TGTGTGCG------------------------------------------------------------------------------------TGTGT------------------------------------------TACTGTT--------ATTTA-----T-----CTCTTGTTC---TTGCAGCGGAAATTAGTGGACTTTTGCTAGAAGAGCAACAGGATATG---------GACATGGAG
droWil2 scf2_1100000004558:1817125-1817427 + dwi_1509 GGGTTATATAAACGCATATTGTCAGTT-GTGTGGGCGTA-AGAAGCATAAAAAGTGCATTTTACT-----------TAC-------------------------------------------------ATCTGT-------------------------------GTGTG--TGTGTGTGTG------------------------------TGTTAATGTGAGAGAAAGACCGAGCCAACAAACACTCGCATATGTTTAT--GAGTGAGAAAGAGAGCAAGT--TTCCTC--------TGT----GTGCTTGTGTG--TGTGTGTGTGTATACAGATTTTTGGATTTGT------------------------------AGTGTGAGT------------AAA---------------------------------------------------------------------TTTTTGG------ATTTTATTATTG---TTGCAGCTGAGATCAGTGGTCGACTTCTAGAAGAGAATCAAGATATAGCCGATACGGATATGGAA
dp5 3:2555768-2556011 - dps_971 -CATTATATAAAGGGGATTGTACGCTT-TCGTGGGCGTA-CGAAGCATAA-AAGTGCATTTTCTTAATGATTTACTCGCGCACACA--CATACACG----------------------------CACGCTCTG--TGCGTATACAGAATTTTGTGTGTGGTGTGTGTACG--CGA----------------------------------------CAGAGAGAGA-------------------------------G------AGACG-----------GTGTTTC-------------GGT----G------------TATGTG-------------------------------------------------------------------------------------------------------------------------------------TAACATCTTCATG------------TTGT----------C---TTACAGCTGAAATCAGTGAGCGCCTACTGGAAGAGAACCAGGAAATA---------GACATGGAA
droPer2 scaffold_2:2746560-2746805 - dpe_1039 -CATTATATAAAGGGGATTGTACGCTT-TCGTGGGCGTA-CGAAGCATAA-AAGTGCATTTTCTTAATGATTTACTCGCGCACACACACACACACG----------------------------CACGCTCTG--TGCGTATACAGAATTTTGTGTGTGGTGTGTGTACG--CGA----------------------------------------CAGAGAGAGA------------------------------------------G-----------AGACTGTGTTTC--------GGT----G------------TATGTG-------------------------------------------------------------------------------------------------------------------------------------TAACATCTTCATG------------TTGT----------C---TTGCAGCTGAAATCAGTGAGCGCCTGCTGGAAGAGAACCAGGAAATA---------GACATGGAA
droAna3 scaffold_13266:16040411-16040749 + GCATTATATAAACGGATTCAAATGCTG-TCGTGGGCGTT-CGCAGCATA---AGTGCATTTTCTTAATGATTTGCCCACGCACACAGCCGTACGCG----------------------------CGAGTTCCGT--ATGTATACAGAACTTGGGGCTAAGGATGTGTGCG--TGAG----GG---------TTCCCTCGCG-------------------------G---------------------------------------CA-----------AGTG------TG--------TGT----GTACTTCT------------G----------------GTTATACTCTATCAGAGGTTGTTATGATTTGATAAACAGACTGGGACA------------TATAAAT----AATTCAAAATTATACTTTTCTAAATTTAATCTAAAAACTATCCT--AAATCCAA-AA------------T----------ACAC---TTTCAGCTGAAATC---GACCGACTGCTGGAAGAGAATCAGGAAATA---------GATATGGAG
droBip1 scf7180000396567:526696-527043 + GCATTATATAAACGGATTCGAATGCTG-TCGTGGGCGTT-CGCAGCATA---AGTGCATTTTCTTAATGATTTGCCCACGCACACAGCCGTGCTTT----------------------------CGAGTTCCGT--ATGTATACAGAACTTGGAGCCAAGCATGTGTGCG--TGAG----GG---------TTCCCTCGCGGCAAGTGTGTGTGTGTGTACTTCTGG---------------------------TTATACTCTAGCTG-----------AGG-------------------------------------------------------------------------------GTGTTATGATTTGGTAAACAGTCTGGGAAAATTTAAAAATAAAACTTGA-AATAA-------------TTAAATAAATTCAGTTCAAACACTATTCTTCAAATCCGCTTA------------TTAA----------T---TTTCAGCTGAAGTC---GACCGGTTACTGGAAGAGAATCAGGATATA---------GACATGGAG
droKik1 scf7180000302471:326104-326367 + GCATTATATAAACTGATTCGAATGCTG-TCGTGGGCGTA-CGCAGCATA---AGTGCATTTTCTCAATGATTGGCCCACCCACACCAGCGCACTCC----------------------------AGAGTTCCGT--GTGTATACAGAACTTGGTGGGGCGAGTGTGTGTG--TGAGTCTG-------------------TG-------------------------G------------------------------------------------------------------------CGT----GTGCATGTGT-------------------------------------------------------------------------------------GCTGTATGCATGTG--------------TT---------------------------TGATGTGCGTTTGTTTTTTT-G---TTGT---CTTCTTTT---TTTCAGCGGAAATCAGCGTTCGGCTGCTGGAAGAGATTCAGGACATA---------GACATGGAG
droFic1 scf7180000453215:512676-512911 - GCATTATATAAACGGATGT----------AGTGGGCGTT-TGCAGCATA---AGTGCATTTTCTTAATGATTTACCCACGCACACCA--------------------------------------AAGTTCCGTGTGTGTATACAGAACTTGCTGGCGCCCCTGTGTGCG--TATATTTGTG----TATGT-----------------------------------------------------------------G------TGGTG-----------GGGCCTTGCATG--------TAT----GTACGT----------------------------------------------------------------------------------------------------ATAT-------------TT---------------------------CAATGTG----TG------------TTGT----------T---TTTCAGCTGAAATCAGCGATCATTTACTGGAGGACATTCAGGATATA---------GACATGGAG
droEle1 scf7180000491347:607987-608235 + GCATTATGTAAACGGATGT----------CGTGGGCGTT-CGAAGCATA---AGTGCATTTTCCTAATGATTTACCCACGCACACCA--------------------------------------AAGTTCCGTGTGTATACACAGAACTCGATGG-GCGTCTTTGTGTG--TGTGTGTGTTTGTGTGTGT-----------------------------------------------------------------G------TGGTG-----------GGGCCTTGCATG--------CCT----GTATGCTTG----T--------------------------------------------------------------------------------------------ATG--------------CT---------------------------TAATGTGTTTTTG------------TTGT----------TTTTTTTTAGCTGAAATCAGCGATCATTTGCGTGAGGACATTCAGGATATA---------GACATGGAG
droRho1 scf7180000780226:135837-136056 + GCATTATGTAAACGGAT-T----------CGTGGGCGTT-CAAAGCATA---AGTGCATTTTCCTAATGATTTACCCACGCACACCA--------------------------------------AAGTTCCGTGTGTATACACAGAACTCGATGCGGCGCATGTGTGAG--T-------------------------------------------------------------------------------------------GGTG-----------GGGCCTTGCATG--------TAT----GTAT--------------------------------------------------------------------------------------------------------G--------------TT---------------------------TAATGTGTTTTTG------------TTTC----------T-CTTTCTAGCTGAAATCAGCGATCATTTGTTGGAGGACAATCAGGATATA---------GACATGGAG
droBia1 scf7180000301506:619231-619498 - GCATTATATAAACGGATGT----------CGTGGGCGTTTTGCAGCATA---A-TGCATTTTCTCAATGATTTACCCACGCACACCA--------------------------------------GAGTTCCGTGTGTGTATACAGAACTTGCTGGGGCCCCTGTGTACG--TGCGTGCGTG--------T--------------------GTC------------G---------------------------TAG------TGGTG-----------GGGCCTTGCATG--------GATGTATGTACATCT----------------------------------------------------------------------------------------TTATGTACATATGT-------------TT---------------------------TAATGGGCATTTG------------TTGTTTTTTTTTGTT---TTTCAGCTGAAATCAGCGATCACTTGCGGGAGGACATTCCGGACCTA---------GACATGGAG
droTak1 scf7180000415870:142052-142292 - GCATTATGTAAACGGATGT----------CGTGGGCGTTTTGCAGCATA---AGTGCATTTTCTTAATGATTTGCCCACGCACACCA--------------------------------------CAGTTCCGTGTGTGTATACAGAACTTGCTGGGGCGCCTGTGTGTT--TGTG------------------------------------------TGCCTGTGG---------------------------TAG------TGGTG-----------GGGCCTTGCATG--------GAT----GTATG----------------------------------------------------------------------------------------------------TATGT-------------TT---------------------------TAATGTGCATTTG------------TTGT----------T---TTTCAGCCGAAATCAGCGATCATTTACGTGAGGACATACCGGATATA---------GACATGGAG
droEug1 scf7180000409672:5721823-5722093 + ACATTATGTAAACGGAAGT----------CGTGGGCGTT-TGCAGCATA---AGTGCATTTTCTTAATGATTTACCCACGCACACCA--------------------------------------AAGTTTCGTGTGTGTATACAGAACTTGCTGGGGCGCCTGTGTGCG--TTTCTATGTG--------T--------------------GTTGTAGTAGTAGTAG---------------------------TA---------TTG-----------GGGCTTTGCATG--------CATAGATGTACACATGTACA------------------------------------------------------------------------------------TATGTATGTATGC-------------TT---------------------------TAATGTGCATTTG------------TTGT----------T---TTTCAGCTGAAATCAGCGATCATTTGCGGGAGGACATTCCGGATTTA---------GACATGGAG
dm3 chr2R:3694348-3694626 + GTATTATATAAACGGATGT----------CGTGGGCGTT-TGCAGCATA---AGTGCATTTTCTCAATGATTTACCCACGCACACCA--------------------------------------CCGTTCTGTGTGTGTATACAGAACTTGCTGGGGCGCCTGTGTGCA--TGTGTGTGTG--------T--------------------GTGTTAGTGCTGGTGG---------------------------CGTTTGTGTTGGTT-----------GGGCCGTCCATG--------TGT----GTACATATGTATA---------------------------------------------------------------------------------TGCTATGTGCATATGG-------------TT---------------------------TAATGTGCATTTG------------TTAT----------G---TTTCAGCCGAAATCAGCGATCATCTGCGGGAGGACATACCGGACTTA---------GACATGGAG
droSim2 2r:4535755-4536023 + dsi_5949 GTATTATATAAACGGATGT----------CGTGGGCGTTTTGCAGCATA---AGTGCATTTTCTCAATGATTTACCCACGCACACCA--------------------------------------CCGTTCCGTGTGTGTATACAGAACTTGCTGGGGCGCCTGTGTGTG--TGTGTGTG----------------------------------TTTGTGCTGGTGG---------------------------TGTTGGTGTTGGT------------GGGCCTTCCATG--------TGT----GTACATGTAT-------------------------------------------------------------------------------------GCTATGTGCATATGG-------------TT---------------------------TAATGTGCATTTG------------TTGT----------G---TTTCAGCCGAAATCAGCGATCATCTGCGCGAGGACATTCCGGATTTA---------GACATGGAG
droSec2 scaffold_1:1350665-1350931 + -TATTATATAAACGGATGT----------CGTGGGCGTTTTGCAGCATA---AGTGCATTTTCTCAATGATTTACCCACGCACACCA--------------------------------------CCGTTCCGTGTGTGTATACAGAACTTGCTGGGGCGCCTGTGTGTG--TGTG------------------------------------TGTTGGTGCTGGTGG---------------------------TGTTGGTGTTGGTG-----------GGGCCTTCCATG--------TGT----GTACATATAT-------------------------------------------------------------------------------------GCTATGTGCATATGG-------------TT---------------------------TAATGTGCATTTG------------TTGT----------G---TTTCAGCCGAAATCAGCGATCATCTGCGCGAGGACATTCCGGATTTA---------GACATGGAG
droYak3 2L:16366384-16366640 + dya_341 GGATTATATAAACGGATGT----------CGTGGGCGTT-TGCAGCATA---AGTGCATTTTCTCAATGATTTACCCACGCACACTA--------------------------------------TAGTTCCGTGTGTGTATACAGAACTTGCTGGGCCGCCTGTGTGTG--TT----------------------------------------TTAGTGCTAGTGG---------------------------TAT------TGGTG-----------GGGCTTTCCATG--------TGT----GTACATATGT-------------------------------------------------------------------------------------GCTATGTGCATGTGT-------------TT---------------------------TAATGTGCATTTG------------TTGT----------G---TTTCAGCTGAAATCAGTGATCATCTGCGGGAGGAAATTCCGAGTTTA---------GACATGGAA
droEre2 scaffold_4929:18913899-18914154 - GGATTATATAAACGGATGT----------CGTGGGCGTT-TGCAGCATA---AGTGCATTTTCTCAATGATTTACCCACGCACACCA--------------------------------------CAGTTCCGTGTGTGTATACAGAACTTGCTGGGGCGCCTGTGTGTG--CG----------------------------------------TTAGTGCTGGCGG---------------------------TAT------TAGTG-----------GGGCCTTTCATG--------TGT----GTACATATTT-------------------------------------------------------------------------------------GGTATGTGCATGTG--------------TT---------------------------TAATGTGCATTTG------------TTGT----------G---TTTCAGCTGAAATCAGCGATCATCTGCGGGAGGACATTCCGGATTTA---------GACATGGAG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
GCGTTATATAAATGAATAAGAATGCTT-ATGTGGGCGAA-CGTAGCATAA-AAGTGCATTTAT---------AATCGACACACACAT--------------------------------------GCGTATTATTTGTGTATACACAAATG---------CCTATGTGTGTGTGCGTGCGTG--TGTGTGT--------------------------------GTCG---------------------------TG---------TTG-----------AGT-ATTTCTAGCCAATTTGTGT----G------------TATGTGTG-------------------ACT----------------------------------------------------GTT---------------------------------------------------------------------ATTTTCC------GTGTTGTTGTTC---TTACAGCGGAAATCAGTGGACTTTTGCTAGATGAGCAACAGGATATG---------GACATGGAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCC------GTGTTGTTGTTC---TTACAG...........................................................2412.002010000000000000000000000000010000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTAGATGAGCAACAGGATATG---------GA.......2511.001000000000000000000000000000000100000000000000000000000000000000
........TAAATGAATAAGAATGCTT-ATGTGGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCAACAGGATATG---------GACA.....2011.001000010000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................GTCG---------------------------TG---------TTG-----------AGT-ATTTCTAGCCAAT..............................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................ACAAATG---------CCTATGTGTGTGTG........................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCTAGATGAGCAACAGGA......................2111.001000000000000000000000000000000010000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTAGATGAGCAACAGGATATG---------GACA.....2711.001000000000000000000000000000000010000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGATGAGCAACAGGATATG---------.........2111.001000000000000000000000000000000000000000000000000000000000001000
....................................................................................................................................................................TGTGTGTGTGCGTGCGTG--..............................................................................................................................................................................................................................................................................................................................................................................................18200.051000000000010000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................TGTGCGTGCGTG--TGTGTGT--------------------------------G......................................................................................................................................................................................................................................................................................................................................................20200.051000000000100000000000000000000000000000000000000000000000000000
droMoj3
GTATTATATAAACGCATAAGAACTCTT-ATGTGGGCGAG-CATAGCATAA-AAGTGCATTT-----ATAATCTACACACACACATG--CGAACACAAACTCACTAACACATATGTATATATGCTTGCTTCTGATTTGTGTATACAAAAATGTATTT-GCGTATGTGTGTG--CG-----------------------CGCA----------------------------------------------------------------TTG-----------AGTATTTG------------CGT----G------------TATTTGTG-------------------AGA----------------------------------------------------CTC---------------------------------------------------------------------ATTTCAAGTGTTGTTTTTGTTGTTC---TTGCAGCGGAAATAAGTGGACTGTTGTTAGATGAGCAACAGGATATG---------GATATGGAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTGTTTTTGTTGTTC---TTG..............................................................2111.001010000
............................................................................CACACACATG--CGAACACAAACTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAGATGAGCAACAGGATATG---------GATATG...2811.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTTGTTGTTC---TTGCAG...........................................................1911.001000001
droGri2
GTATTATATAAATGTGCAGCAGTGCTGATTGTGGGCAAA-CGTAGCATAA-AAATGCATTTAAT---------CCCCACACACACAT----AT--------------------------------GCGTCTGATTTGTGTATACACAAAC---------GTGTGTGTGTG--TG----T--------------------------------------------------------------------------------------GTG-----------GAGTATTTCTAG--------CCT----GTTTGCGTG----TGTGTGCG------------------------------------------------------------------------------------TGTGT------------------------------------------TACTGTT--------ATTTA-----T-----CTCTTGTTC---TTGCAGCGGAAATTAGTGGACTTTTGCTAGAAGAGCAACAGGATATG---------GACATGGAGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATTAGTGGACTTTTGCTAGA..................................2311.00101
droWil2
GGGTTATATAAACGCATATTGTCAGTT-GTGTGGGCGTA-AGAAGCATAAAAAGTGCATTTTACT-----------TAC-------------------------------------------------ATCTGT-------------------------------GTGTG--TGTGTGTGTG------------------------------TGTTAATGTGAGAGAAAGACCGAGCCAACAAACACTCGCATATGTTTAT--GAGTGAGAAAGAGAGCAAGT--TTCCTC--------TGT----GTGCTTGTGTG--TGTGTGTGTGTATACAGATTTTTGGATTTGT------------------------------AGTGTGAGT------------AAA---------------------------------------------------------------------TTTTTGG------ATTTTATTATTG---TTGCAGCTGAGATCAGTGGTCGACTTCTAGAAGAGAATCAAGATATAGCCGATACGGATATGGAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................................................................................................................................................................................................................................................................................................................................GTATACAGATTTTTGGATTTGT------------------------------..........................................................................................................................................................................................2213.00330000
...................................................................................................................................................................................................................................................................................................................................TGTGTGTATACAGATTTTTGGATTTG.........................................................................................................................................................................................................................2611.00100001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGTGGTCGACTTCTAGAAGA...............................2411.00100100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGG------ATTTTATTATTG---TTGCA............................................................2111.00100010
...................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------------------------------------------------------TTTTTGG------ATTTTATTATTG---TTGCAG...........................................................2611.00100001
...........................................................................................................................................................................................................................................................................................................TGT----GTGCTTGTGTG--TGTGTGT................................................................................................................................................................................................................................................21200.05100100
................................................................................................................................ATCTGT-------------------------------GTGTG--TGTGTGTGT.................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
dp5
-CATTATATAAAGGGGATTGTACGCTT-TCGTGGGCGTA-CGAAGCATAA-AAGTGCATTTTCTTAATGATTTACTCGCGCACACA--CATACACG----------------------------CACGCTCTG--TGCGTATACAGAATTTTGTGTGTGGTGTGTGTACG--CGA----------------------------------------CAGAGAGAGA-------------------------------G------AGACG-----------GTGTTTC-------------GGT----G------------TATGTG-------------------------------------------------------------------------------------------------------------------------------------TAACATCTTCATG------------TTGT----------C---TTACAGCTGAAATCAGTGAGCGCCTACTGGAAGAGAACCAGGAAATA---------GACATGGAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................................................ACTCGCGCACACA--CATACACG----------------------------C.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
........................................................................TACTCGCGCACACA--CATACACG----------------------------C.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000001
.......ATAAAGGGGATTGTACGCTT-TCGTGGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000001
...........AGGGGATTGTACGCTT-TCGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCTACTGGAAGAGAACCA.........................2011.0010000100000
...........................................................................................................................................................TGTGGTGTGTGTACG--CGA----------------------------------------C..............................................................................................................................................................................................................................................................................................................................................................1911.0010000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGTGAGCGCCTACTGGAAGAGAAC...........................2611.0010100000000
....TATATAAAGGGGATTGTACG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
droPer2
-CATTATATAAAGGGGATTGTACGCTT-TCGTGGGCGTA-CGAAGCATAA-AAGTGCATTTTCTTAATGATTTACTCGCGCACACACACACACACG----------------------------CACGCTCTG--TGCGTATACAGAATTTTGTGTGTGGTGTGTGTACG--CGA----------------------------------------CAGAGAGAGA------------------------------------------G-----------AGACTGTGTTTC--------GGT----G------------TATGTG-------------------------------------------------------------------------------------------------------------------------------------TAACATCTTCATG------------TTGT----------C---TTGCAGCTGAAATCAGTGAGCGCCTGCTGGAAGAGAACCAGGAAATA---------GACATGGAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................................................................................................................................................GTGTGTGTACG--CGA----------------------------------------CAGAG..........................................................................................................................................................................................................................................................................................................................................................1911.001000001
droAna3
GCATTATATAAACGGATTCAAATGCTG-TCGTGGGCGTT-CGCAGCATA---AGTGCATTTTCTTAATGATTTGCCCACGCACACAGCCGTACGCG----------------------------CGAGTTCCGT--ATGTATACAGAACTTGGGGCTAAGGATGTGTGCG--TGAG----GG---------TTCCCTCGCG-------------------------G---------------------------------------CA-----------AGTG------TG--------TGT----GTACTTCT------------G----------------GTTATACTCTATCAGAGGTTGTTATGATTTGATAAACAGACTGGGACA------------TATAAAT----AATTCAAAATTATACTTTTCTAAATTTAATCTAAAAACTATCCT--AAATCCAA-AA------------T----------ACAC---TTTCAGCTGAAATC---GACCGACTGCTGGAAGAGAATCAGGAAATA---------GATATGGAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................AAATGCTG-TCGTGGGCGTT-CGCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
....................................................................................CAGCCGTACGCG----------------------------CGAGTTCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
.................................................................................................................................................GAACTTGGGGCTAAGGATGTGT...............................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
droBip1
GCATTATATAAACGGATTCGAATGCTG-TCGTGGGCGTT-CGCAGCATA---AGTGCATTTTCTTAATGATTTGCCCACGCACACAGCCGTGCTTT----------------------------CGAGTTCCGT--ATGTATACAGAACTTGGAGCCAAGCATGTGTGCG--TGAG----GG---------TTCCCTCGCGGCAAGTGTGTGTGTGTGTACTTCTGG---------------------------TTATACTCTAGCTG-----------AGG-------------------------------------------------------------------------------GTGTTATGATTTGGTAAACAGTCTGGGAAAATTTAAAAATAAAACTTGA-AATAA-------------TTAAATAAATTCAGTTCAAACACTATTCTTCAAATCCGCTTA------------TTAA----------T---TTTCAGCTGAAGTC---GACCGGTTACTGGAAGAGAATCAGGATATA---------GACATGGAGSizeHit CountTotal NormTotal
No Reads
droKik1
GCATTATATAAACTGATTCGAATGCTG-TCGTGGGCGTA-CGCAGCATA---AGTGCATTTTCTCAATGATTGGCCCACCCACACCAGCGCACTCC----------------------------AGAGTTCCGT--GTGTATACAGAACTTGGTGGGGCGAGTGTGTGTG--TGAGTCTG-------------------TG-------------------------G------------------------------------------------------------------------CGT----GTGCATGTGT-------------------------------------------------------------------------------------GCTGTATGCATGTG--------------TT---------------------------TGATGTGCGTTTGTTTTTTT-G---TTGT---CTTCTTTT---TTTCAGCGGAAATCAGCGTTCGGCTGCTGGAAGAGATTCAGGACATA---------GACATGGAGSizeHit CountTotal NormTotal
No Reads
droFic1
GCATTATATAAACGGATGT----------AGTGGGCGTT-TGCAGCATA---AGTGCATTTTCTTAATGATTTACCCACGCACACCA--------------------------------------AAGTTCCGTGTGTGTATACAGAACTTGCTGGCGCCCCTGTGTGCG--TATATTTGTG----TATGT-----------------------------------------------------------------G------TGGTG-----------GGGCCTTGCATG--------TAT----GTACGT----------------------------------------------------------------------------------------------------ATAT-------------TT---------------------------CAATGTG----TG------------TTGT----------T---TTTCAGCTGAAATCAGCGATCATTTACTGGAGGACATTCAGGATATA---------GACATGGAGSizeHit CountTotal NormTotal
No Reads
droEle1
GCATTATGTAAACGGATGT----------CGTGGGCGTT-CGAAGCATA---AGTGCATTTTCCTAATGATTTACCCACGCACACCA--------------------------------------AAGTTCCGTGTGTATACACAGAACTCGATGG-GCGTCTTTGTGTG--TGTGTGTGTTTGTGTGTGT-----------------------------------------------------------------G------TGGTG-----------GGGCCTTGCATG--------CCT----GTATGCTTG----T--------------------------------------------------------------------------------------------ATG--------------CT---------------------------TAATGTGTTTTTG------------TTGT----------TTTTTTTTAGCTGAAATCAGCGATCATTTGCGTGAGGACATTCAGGATATA---------GACATGGAGSizeHit CountTotal NormTotal
No Reads
droRho1
GCATTATGTAAACGGAT-T----------CGTGGGCGTT-CAAAGCATA---AGTGCATTTTCCTAATGATTTACCCACGCACACCA--------------------------------------AAGTTCCGTGTGTATACACAGAACTCGATGCGGCGCATGTGTGAG--T-------------------------------------------------------------------------------------------GGTG-----------GGGCCTTGCATG--------TAT----GTAT--------------------------------------------------------------------------------------------------------G--------------TT---------------------------TAATGTGTTTTTG------------TTTC----------T-CTTTCTAGCTGAAATCAGCGATCATTTGTTGGAGGACAATCAGGATATA---------GACATGGAGSizeHit CountTotal NormTotal
No Reads
droBia1
GCATTATATAAACGGATGT----------CGTGGGCGTTTTGCAGCATA---A-TGCATTTTCTCAATGATTTACCCACGCACACCA--------------------------------------GAGTTCCGTGTGTGTATACAGAACTTGCTGGGGCCCCTGTGTACG--TGCGTGCGTG--------T--------------------GTC------------G---------------------------TAG------TGGTG-----------GGGCCTTGCATG--------GATGTATGTACATCT----------------------------------------------------------------------------------------TTATGTACATATGT-------------TT---------------------------TAATGGGCATTTG------------TTGTTTTTTTTTGTT---TTTCAGCTGAAATCAGCGATCACTTGCGGGAGGACATTCCGGACCTA---------GACATGGAGSizeHit CountTotal NormTotal
No Reads
droTak1
GCATTATGTAAACGGATGT----------CGTGGGCGTTTTGCAGCATA---AGTGCATTTTCTTAATGATTTGCCCACGCACACCA--------------------------------------CAGTTCCGTGTGTGTATACAGAACTTGCTGGGGCGCCTGTGTGTT--TGTG------------------------------------------TGCCTGTGG---------------------------TAG------TGGTG-----------GGGCCTTGCATG--------GAT----GTATG----------------------------------------------------------------------------------------------------TATGT-------------TT---------------------------TAATGTGCATTTG------------TTGT----------T---TTTCAGCCGAAATCAGCGATCATTTACGTGAGGACATACCGGATATA---------GACATGGAGSizeHit CountTotal NormTotal
No Reads
droEug1
ACATTATGTAAACGGAAGT----------CGTGGGCGTT-TGCAGCATA---AGTGCATTTTCTTAATGATTTACCCACGCACACCA--------------------------------------AAGTTTCGTGTGTGTATACAGAACTTGCTGGGGCGCCTGTGTGCG--TTTCTATGTG--------T--------------------GTTGTAGTAGTAGTAG---------------------------TA---------TTG-----------GGGCTTTGCATG--------CATAGATGTACACATGTACA------------------------------------------------------------------------------------TATGTATGTATGC-------------TT---------------------------TAATGTGCATTTG------------TTGT----------T---TTTCAGCTGAAATCAGCGATCATTTGCGGGAGGACATTCCGGATTTA---------GACATGGAGSizeHit CountTotal NormTotal
No Reads
dm3
GTATTATATAAACGGATGT----------CGTGGGCGTT-TGCAGCATA---AGTGCATTTTCTCAATGATTTACCCACGCACACCA--------------------------------------CCGTTCTGTGTGTGTATACAGAACTTGCTGGGGCGCCTGTGTGCA--TGTGTGTGTG--------T--------------------GTGTTAGTGCTGGTGG---------------------------CGTTTGTGTTGGTT-----------GGGCCGTCCATG--------TGT----GTACATATGTATA---------------------------------------------------------------------------------TGCTATGTGCATATGG-------------TT---------------------------TAATGTGCATTTG------------TTAT----------G---TTTCAGCCGAAATCAGCGATCATCTGCGGGAGGACATACCGGACTTA---------GACATGGAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................................................................................................................................................GCTGGGGCGCCTGTGTGCA--TGTG......................................................................................................................................................................................................................................................................................................................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................GTTTGTGTTGGTT-----------GGGCC..........................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGCGGGAGGACATACC.........................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000
...............................................................................................................................................................................................................................GTGG---------------------------CGTTTGTGTTGGTT-----------GGG............................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000010000000000000000000000000
....................................................................................................................................................................................TG--------T--------------------GTGTTAGTGCTGGTGG---------------------------CG......................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
.............................CGTGGGCGTT-TGCAGCATA---AG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCGATCATCTGCGGGAGGACA.............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..............................................................................................................................................................CGCCTGTGTGCA--TGTGTG....................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................ACTTGCTGGGGCGCCTGTGTG..............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................GTTAGTGCTGGTGG---------------------------CGTTTGTGT...............................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..................................................................................................................................................................................TGTG--------T--------------------GTGTTAGTGCTGGTGG---------------------------C.......................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................GTGTTGGTT-----------GGGCCGTCCATG--------...........................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...................................................................................................................................................................................GTG--------T--------------------GTGTTAGTGCTGGTGG---------------------------C.......................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................GTGTTGGTT-----------GGGCCGTCCATG--------TGT----G...................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................GGGGCGCCTGTGTGCA--TGTG......................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.........AAACGGATGT----------CGTGGGCGTT-T.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................TATACAGAACTTGCTGGGGCGT.....................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................GTATACAGAACTTGCTGGGGCG......................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..............................................................CTCAATGATTTACCCACGCAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGAGGACATACCGGACTTA---------GA.......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................ACTTGCTGGGGCGCCTGTGTGCA--TGTG......................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................TGTG--------T--------------------GTGTTAGTGCTGGTGG---------------------------........................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................GTGCTGGTGG---------------------------CGTTTGTGT...............................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACCGGACTTA---------GACATGGAG2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATCTGCGGGAGGACG.............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACCGGACTTA---------GACATGGA.2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................CGTTTGTGTTGGTT-----------GGGCCGT........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCGAAATCAGCGATCATCTG.......................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATCTGCGGGAGGACATACC.........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................................................................................................................GCTGGTGG---------------------------CGTTTGTGTTGGT...........................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATCTGCGGGAGGACA.............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................................TGTG--------T--------------------GTGTTAGTGCTGGTGG---------------------------CG......................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...............................................................................................................................................................................................................................GTGG---------------------------CGTTTGTGTTGGTT-----------GT.............................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
............................................................................................................................................ATACAGAACTTGCTGGGGCGC.....................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGACATACCGGACTTA---------GAC......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................TTTGTGTTGGTT-----------GGGCCGTCC......................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................TGGTT-----------GGGCCGTCCATG--------TGT----G...................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGATCATCTGCGGGAGGAC..............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................TGTGTGTGTG--------T--------------------GTGTTAGTGCTGGT.....................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................CGTTTGTGTTGGTT-----------GGGCCGTCCATC--------C..........................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCGGGAGGACATACCGGACTTA---------GA.......2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATCAGCGATCATCTGCGGGAG.................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCCGAAATCAGCGATCATC.........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................................................GTGCTGGTGG---------------------------CGTTTGTGTTGGT...........................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................TGG-------------TT---------------------------TAATGTGCATTTG------------T..................................................................................1911.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................CGTTTGTGTTGGTT-----------GGGC...........................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GGGCGTT-TGCAGCATA---AGTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.............................................................................................................................................TACAGAACTTGCTGGGGCGCCTGTGT...............................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................CTTGCTGGGGCGCCTGTGTG..............................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGCGGGAGGACATACCGGA......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGATCATCTGCGGGAGGACA.............................2211.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................ATGATTTACCCACGCACACCA--------------------------------------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................GGGCGCCTGTGTGCA--TGTGTGA...................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................TT-----------GGGCCGTCCATG--------TGT----G...................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGGAGGACATACCGGACTTA---------GACATGGA.3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCCGAAATCAGCGATCAT..........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................GGCGCCTGTGTGCA--TGTGTGT...................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATCTGCGGGAGGACATACCG........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
....TATATAAACGGATGT----------CGTGGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................TGGTGG---------------------------CGTTTGTGTTGGTT-----------T..............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCGATCATCTGCGGGAGGACA.............................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCGGGAGGACATACCGG.......................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TGCTATGTGCATATGG-------------TT---------------------------TAATGTGCA...................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................GCATA---AGTGCATTTTCTCAAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCAGCGATCATCTGCGGGA..................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGATCATCTGCGGGAGGACATACCGG.......................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................GG-------------TT---------------------------TAATGTGCATTTG------------TTAT----------G---TTTCA............................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................TGTGTATACAGAACTTGCTGG..........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................TGTTAGTGCTGGTGG---------------------------CGTTTG..................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................GTGTG--------T--------------------GTGTTAGTGCTGGTGG---------------------------CGT.....................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGCGGGAGGACATAC..........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATACCGGACTTA---------GACATG...2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.......................................................................................................................................................GCTGGGGCGCCTGTGTGCA--TGTGT.....................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATCTGCGGGAGGACATACCGGAC.....................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGATCATCTGCGGGAG.................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
......................................................................................................................................................................................................................................................................TTGGTT-----------GGGCCGTCCATG--------TGT----....................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........ACGGATGT----------CGTGGGCGTT-TGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...............................................................................................................................................................GCCTGTGTGCA--TGTGTGTGTG--------T--------------------GTGT...............................................................................................................................................................................................................................................................................................................................................................2630.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................TGCA--TGTGTGTGTG--------T--------------------GTGTT..............................................................................................................................................................................................................................................................................................................................................................20100.2020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000
droSim2
GTATTATATAAACGGATGT----------CGTGGGCGTTTTGCAGCATA---AGTGCATTTTCTCAATGATTTACCCACGCACACCA--------------------------------------CCGTTCCGTGTGTGTATACAGAACTTGCTGGGGCGCCTGTGTGTG--TGTGTGTG----------------------------------TTTGTGCTGGTGG---------------------------TGTTGGTGTTGGT------------GGGCCTTCCATG--------TGT----GTACATGTAT-------------------------------------------------------------------------------------GCTATGTGCATATGG-------------TT---------------------------TAATGTGCATTTG------------TTGT----------G---TTTCAGCCGAAATCAGCGATCATCTGCGCGAGGACATTCCGGATTTA---------GACATGGAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............................................................................................................................................TACAGAACTTGCTGGGGCGCCTG..................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TT---------------------------TAATGTGCATTTG------------TTGT----------G---T................................................................2111.00100000010000000000
.........................................................................................................................................TGTATACAGAACTTGCTGGGGCGCCTG..................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000010000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCGGATTTA---------GACATG...1811.00110000000000000000
...............................................................................................................................................................GCCTGTGTGTG--TGTGTGTG----------------------------------T...............................................................................................................................................................................................................................................................................................................................................................20200.05100000000000100000
droSec2
-TATTATATAAACGGATGT----------CGTGGGCGTTTTGCAGCATA---AGTGCATTTTCTCAATGATTTACCCACGCACACCA--------------------------------------CCGTTCCGTGTGTGTATACAGAACTTGCTGGGGCGCCTGTGTGTG--TGTG------------------------------------TGTTGGTGCTGGTGG---------------------------TGTTGGTGTTGGTG-----------GGGCCTTCCATG--------TGT----GTACATATAT-------------------------------------------------------------------------------------GCTATGTGCATATGG-------------TT---------------------------TAATGTGCATTTG------------TTGT----------G---TTTCAGCCGAAATCAGCGATCATCTGCGCGAGGACATTCCGGATTTA---------GACATGGAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
GGATTATATAAACGGATGT----------CGTGGGCGTT-TGCAGCATA---AGTGCATTTTCTCAATGATTTACCCACGCACACTA--------------------------------------TAGTTCCGTGTGTGTATACAGAACTTGCTGGGCCGCCTGTGTGTG--TT----------------------------------------TTAGTGCTAGTGG---------------------------TAT------TGGTG-----------GGGCTTTCCATG--------TGT----GTACATATGT-------------------------------------------------------------------------------------GCTATGTGCATGTGT-------------TT---------------------------TAATGTGCATTTG------------TTGT----------G---TTTCAGCTGAAATCAGTGATCATCTGCGGGAGGAAATTCCGAGTTTA---------GACATGGAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCATCTGCGGGAGGAAATTCCGA.......................2511.00100100000000
droEre2
GGATTATATAAACGGATGT----------CGTGGGCGTT-TGCAGCATA---AGTGCATTTTCTCAATGATTTACCCACGCACACCA--------------------------------------CAGTTCCGTGTGTGTATACAGAACTTGCTGGGGCGCCTGTGTGTG--CG----------------------------------------TTAGTGCTGGCGG---------------------------TAT------TAGTG-----------GGGCCTTTCATG--------TGT----GTACATATTT-------------------------------------------------------------------------------------GGTATGTGCATGTG--------------TT---------------------------TAATGTGCATTTG------------TTGT----------G---TTTCAGCTGAAATCAGCGATCATCTGCGGGAGGACATTCCGGATTTA---------GACATGGAGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCGGGAGGACATTCCGGATTTA---------GAC......2815.0050000005
........................................................................................................................................GTGTATACAGAACTTGCTGGG.........................................................................................................................................................................................................................................................................................................................................................................................................................2112.0022000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGAAATCAGCGATCATCTGCGGGA..................................2711.0010000100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATCAGCGATCATCTGCGGGA..................................2311.0010000010
.............................................................................................................................................................................................................................TGGCGG---------------------------TAT------TAGTG-----------GGGCCTTTCATG--------T..........................................................................................................................................................................................................................................................................2711.0010000100

Generated: 05/16/2015 at 10:18 PM