ID:

dvi_4588

 Coordinate:

scaffold_12855:9939269-9939559 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-31.6 -31.6 -31.6

Flybase annnotation

CDS [Dvir\GJ11105-cds]; exon [dvir_GLEANR_10984:5]; CDS [Dvir\GJ11105-cds]; exon [dvir_GLEANR_10984:4]; intron [Dvir\GJ11105-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TTAACAAACGCGTCAAGGCTAACAATTATCAGGAGCACACCAATGAAGATGTACATAACAAATATTCTAAATATGCAGGCATTAAATATAGTCGACTAGCCGCTTATCCTGCCGTTGATGACGACAGTGATGATGAGGCGCAGCTAGTTGGCAATAAAGAAGCACACAACGTTTGACGCCGTTTGCCAAACGATTTATATAGAAATACTTTATTGTTTTATTTTATTTAATGCTTTTAACATACGCACGTGCTAACCAAAGTTTTTTGTTTATGTGTTAACCAATAACGGCCTCAAATAATTCGCTTCAAATTTTCCTTCTTTTTCTGCTGCGCCTCCTAGGACGAACCCACACCGCCTATACCCGCTGGCCCCAACAATCAAGAGCTAAG
***********************************************************************************************************************************..(((((((..(((..((.......))..))).......((((((.((((((....(((((((.................))))))).................((((((((.(((...(((......)))....)))...)))))))).....)))))).))))))....))))))).........************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total GSM1528803
follicle cells		 M047
female body
 M028
head
 SRR060665
9_females_carcasses_total
 SRR060667
160_females_carcasses_total
 SRR060668
160x9_males_carcasses_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060679
140x9_testes_total
 SRR060681
Argx9_testes_total
 V053
head
 M061
embryo
 V116
male body		 SRR060671
9x160_males_carcasses_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060678
9x140_testes_total
...................................................................................................................................GATGAGGCGCAGCTAGTTGGCA.............................................................................................................................................................................................................................................. 22 0 1 2.00 2 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................AATAAAGAAGCACACAACGTT.......................................................................................................................................................................................................................... 21 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................AATTCGCTTCAAATTTTCCT......................................................................... 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................CACAAAGTTAGACGCCGTT................................................................................................................................................................................................................ 19 2 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................................................CCGCCTATACCCGCTGGCCCCAAC.............. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................GTTTGACGCCGTTTGCCAAAC........................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................TATCAGGAGCACACCAATGAAGA...................................................................................................................................................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................................................................GGCCCCAACAATCAAGAG..... 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................ATGAGGCGCAGCTAGTTGGCA.............................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................................................CCGCCTATACCCGGTGGCCCCAAC.............. 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................GTTTGACGCCGTTTACCAAAC........................................................................................................................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................GATGACGACAGTGATGATGAGAC............................................................................................................................................................................................................................................................ 23 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................CTAACAATTATCAGGAGC................................................................................................................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................CTGGTTGGCAATAAAGAGGCA................................................................................................................................................................................................................................... 21 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................GTTTGACGCCGTTGGCCAAAC........................................................................................................................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................CATTAACAGGAGCACACCA............................................................................................................................................................................................................................................................................................................................................................. 19 2 3 0.33 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................GCACACCAATGAAGATGAC.................................................................................................................................................................................................................................................................................................................................................. 19 2 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................TAAGACTGTGATGATGAGGCG........................................................................................................................................................................................................................................................... 21 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................ATTGATGACGAAAGTGATGCT................................................................................................................................................................................................................................................................. 21 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.............................................................................................................................................................................................................................TATATTTAATGCTTTTAACT...................................................................................................................................................... 20 2 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.............................................................................................................TGCCGTTGGTGACGAAGGTG...................................................................................................................................................................................................................................................................... 20 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
....................GACCATTATCAGGAGCACAA............................................................................................................................................................................................................................................................................................................................................................... 20 3 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
......................CCATTAACAGGAGCCCACCA............................................................................................................................................................................................................................................................................................................................................................. 20 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
..............................................................................................................................................................................................................................................................ACCAAAGTTTATTGATTAT...................................................................................................................... 19 2 18 0.06 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................TATATAGAAATGGTTTATT................................................................................................................................................................................. 19 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..............................................................................................................GCCGTTGGTGACGAAGGTG...................................................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
......................................................................ATATCCAGGCATTAAAGGT.............................................................................................................................................................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0

Anti-sense strand reads

AATTGTTTGCGCAGTTCCGATTGTTAATAGTCCTCGTGTGGTTACTTCTACATGTATTGTTTATAAGATTTATACGTCCGTAATTTATATCAGCTGATCGGCGAATAGGACGGCAACTACTGCTGTCACTACTACTCCGCGTCGATCAACCGTTATTTCTTCGTGTGTTGCAAACTGCGGCAAACGGTTTGCTAAATATATCTTTATGAAATAACAAAATAAAATAAATTACGAAAATTGTATGCGTGCACGATTGGTTTCAAAAAACAAATACACAATTGGTTATTGCCGGAGTTTATTAAGCGAAGTTTAAAAGGAAGAAAAAGACGACGCGGAGGATCCTGCTTGGGTGTGGCGGATATGGGCGACCGGGGTTGTTAGTTCTCGATTC
*************************************************************************..(((((((..(((..((.......))..))).......((((((.((((((....(((((((.................))))))).................((((((((.(((...(((......)))....)))...)))))))).....)))))).))))))....))))))).........*********************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V047
embryo
 SRR060662
9x160_0-2h_embryos_total
 SRR060672
9x160_females_carcasses_total
 V116
male body		 SRR060657
140_testes_total
 V053
head
 SRR060659
Argentina_testes_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060663
160_0-2h_embryos_total
..............................................................................................................................CACTACTACTCCGCGTCGAT..................................................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................AAACCGCGGCTAACGGTTTG........................................................................................................................................................................................................ 20 2 2 0.50 1 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................TGTTCATTGCCGGAGTTTA............................................................................................. 19 2 2 0.50 1 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................TGGAGTTTAGTAAGCGAA.................................................................................... 18 2 20 0.15 3 0 0 0 0 0 0 2 0 1
.................................................................................................................................................................................................................................................................................................CGGAGTTTAGTAAGCGAA.................................................................................... 18 1 14 0.14 2 0 0 0 0 2 0 0 0 0
............................................................................................................................................................................................................................................................................................................AGGGGAAGTTTAAAAGGAA........................................................................ 19 2 7 0.14 1 0 0 0 1 0 0 0 0 0
.......................................................................................................................CTGCTGTCGCTTCTACTGCGC........................................................................................................................................................................................................................................................... 21 3 9 0.11 1 0 0 0 0 0 1 0 0 0
..................................................................................................................................................................................................................................................................................AAAATTGGTTACTGTCGGAG................................................................................................. 20 3 10 0.10 1 0 0 0 1 0 0 0 0 0
.................................................................................................................................TAGTAATCCGCGTCGAGCAA.................................................................................................................................................................................................................................................. 20 3 17 0.06 1 0 0 0 0 0 0 0 1 0
...............................................................................................................................................................................TGCAGCAAATGGTTTGGTA..................................................................................................................................................................................................... 19 3 17 0.06 1 0 0 0 1 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................CGGAGTTTAGGAAGCGAA.................................................................................... 18 2 20 0.05 1 0 0 0 0 1 0 0 0 0
.................................................................................................................................................................................................................................................................................................TGGAGATTATTAAGCGAA.................................................................................... 18 2 20 0.05 1 0 0 0 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12855:9939219-9939609 + dvi_4588 TTAACAAACGCGTCAAGGCTAACAATTATCAGGAGCACACCAATGAAGATGTACATAACAAA---TATTCTA---AATATGCAGGCATTAAATATAGTCGACTAGC---CGC---------------------TTATCCTGCCGTTGATGACGACA---------------------------GT---GATGATGAGGCGCAGCTAGTTGGCAATAAAGAAGCACACAACGTTTGACGCCGTTTGCCAAA---CGA----TTT-ATATAG--AA--AT--------------ACTTTATTGTTTTATTTT-ATT--T-------AAT------------------GCTTTTAACATACG--------------------------------CA-------C----------GTGCTAACCAAAGTTTTTTGT----T-----TATGTGTTA-----ACCA--------------------------A-------------TAAC-G---GCCTCAAATAATTCGCTTCAAA---------------------TTT-TCCTTCTT-TT-TCT--GCTGCGCCTCCTAGGACGAACCCA-CAC--CGCCTATACCCGCT------------GGCCCCAACAATCAAGAGCTAAG
droMoj3 scaffold_6540:22948886-22949319 - dmo_2030 TAAACAAACGCGTCAAGACGAACAACTATCAGGAGCACACCAATGAAGATGTACATAACACT---TATTCTA---AATATGCAGGCATAAAATATAGTCAACTAGTTGCTAC---------------------TCCTGATGATGATGATGATGATG---ATGTTGATCGTTATCATGATCATGATGATGATGATGAGACGCAGCTAGTTGGCAATAAAGAAACACTTAGCGTTTGATGCCTAATGGCAAAAGGCGA----TTT-ATATATATGTATAC--------------ATCTTTTTGTTTTATTTT-ATT--T-------AATATTT-----------------TTCAATTCGCAC---------------------------------------------------GCTCTAACCCAAAGTCTTTGT----TGTGTTTATTAATTA-----------ACCC--------------------A----------T--TACCCG---GTCTTAACTAATACGCTTCAAA---------------------TTT-TCCTTCTA-TT-TTT--GCTGCGGCTGATAGGACGAACCAG-CTC--CGCCTCTGCCAGCT------------AGTGCCAACAATCAAGAGCTGAG
droGri2 scaffold_15074:4273416-4273887 - TGAATAAACGCGTCAAGGCCAACAATTATCAGGAGCACACCAATGAAGATGTACAGTTGAGA---TCTATTC---GATATTCAGGCATTAAATATAGTCGACTAGCCGCTAATCCTGCCATCGGTGACATCAGTCATGATGATGATGATGATGATA---ATGA---TATTGATCATGA---TGATGATGACGATGATGAGCAGCTAGTTGGCAATAAAGAAGCACACAACTTT-------------------------------TAAGTT--TCACATCGAGACATA-----TTTTATTTGTTTTATTTT-ATGTTATT-----TCGTTTTTCACTTTGTT--G--TTACTAACAC-------------------------------T---CAAGCATGTC---------T--CCTAACAAAAGCCGTT----------------------------------------TATTTCTGTTGTTTTCAAT-GA-CA-TTT--TT---------ACTAATTTTTG----CTAAAAATAACCTTTCTCTTCTCGTATCTCTCTTCCTT-TTTTTG-TACTGCATCTGGTAGGATGAGCCCAGTGCCCCCCCACCGCCCGTC------------GGCAGCAACAATCAGGAGCTGAG
droWil2 scf2_1100000004943:12738997-12739405 - dwi_3454 TGAACAAGCGTGTTAAGGCCA---ACTATCAGGAGCACACCAATGAAGATGTACATATGAAATCATATTCTA---AATATGCAGGCATACAATATAGTTTACTCGTAACAGT---------------------CCATGATGATCATA---CCAATA---ATGA---TCGTGATAATAATGAAGATGATGATGATGAAGAT---------------------------CGCATTTGAA------------T---AGAAATTTTT-TGATTT--TTATAG--AAAAATCTTTTGTCTTTTTTGTTTCATTTC-CTGTAT-------------------------------TCTAACCTCCTGTATC----CATTGCTGCACCCCCACAGTCCAGA-------CTAACACC--A--ACTCACTCTAAGTT--------------------------------------------------------------TA-G-TTTTT------GGTTAATTCAACTAATA----CGTGG--------------------GATATGCTATATA--T-G----------TTTTACAGGATGAACCGA-CAC--CGCCCATGCCAGCAGCATCCACATCGG---CCAACAATCAAGAGTTAAG
dp5 2:21599092-21599500 - dps_692 TGAATAAGCGCGTAAAGGCCA---ATTACCAGGAGCACACCAATGAAGATGTACATAGCAAA---CATTCTAAGAAATATGCAGGCATACAGTATAGTCTACTAGTTACAGC---------------------CCCTGATATTGATGATGATG---------------------------------------ATGAGGCTGAACTAGTTGACAATAAAGAAGCACCACACATTTGAA------------T---AGA----TTT-TATTTG--CG--AA--------------CCTTTTTTGTTTCATTTTTACGTTT-------ATGTT--------------C---CCCTAACCCCCCGCACCC---CATCGCCTCGCCGCGACAC----A---------------------ACTAACCCACTGATTGAGTTCCTT-----------TTAAGCCACAACCAACTCATTAATTTCCTTT---------------------------ATT-CCCCAACTAATG----CGAAA---------------------ATCTTTCACCT--TT-TCTTTTCTG--CCTCCCAGGATGAGCCGA-CAC--CGCCCATGCCCGCC------------G---CCACTAACCAAGAGCTCAG
droPer2 scaffold_3:4384120-4384528 - dpe_1379 TGAATAAGCGCGTAAAGGCCA---ATTACCAGGAGCACACCAATGAAGATGTACATAGCAAA---CATTCTAAGAAATATGCAGGCATACAGTATAGTCTACTAGTTACAGC---------------------CCCTGATATTGATGATGATG---------------------------------------ATGAGGCTGAACTAGTTGACAATAAAGAAGCACCACACATTTGAA------------T---AGA----TTT-TAATTG--CG--AA--------------CCTTTTTTGTTTCATTTTTACGTTT-------ATGTT--------------C---CCCTAACCCCCCGCACCC---CATCGCCTCGCCGCGACAC----A---------------------ACTAACCCACTGACTGAGTTTCTT-----------TTAAGCCACAACCAACCCATTAATTTCCTTT---------------------------ATT-CCCCAACTAATG----CGAAA---------------------ATCTTTCACCT--TT-TCTTTTCTG--CCTCCCAGGATGAGCCGA-CAC--CGCCCATGCCCGCC------------G---CCACTAACCAAGAGCTCAG
droAna3 scaffold_13088:493395-493807 + TAAATAAGCGAGTTAAGGCCA---ACTATCAGGAGCACACCAACGAAGATGTACATAGAAAA---AGTTCTA---GATACGCTGGCATTCAGTATAGCCTCCTAGTTACGGC---------------------CCAGGGCGATGATAATGATGATG---AAGA------------------TTTTAATGCCGATGTGGCGCAACTAGTTGGCAATAAAGAAGCACCACACTTTTAAA------------A---AGA----CTTCCAATTT--CCATTA--------------CTCCTTTTGTTTCATTTT-GTGTTT-CCGTTTCCGATTTTA-TTTCGTTATTAGTTTCTAACCCC-TCCTCA----C--------ATAGAGACAC----CA-------C---------C--ACTAACCACAGAATTCAGT----T-----------TTGAGAAACCTA-------------------------------------C--TACC-------ATGAACTAATC----GCAAA---------------------TTTATCCACTCCTCT-CCC----------AACCAGGACGAACCGA-CGC--CACCACTGCCCTCC------------G---CTAACAACCAGGAGCTGAG
droBip1 scf7180000396413:548416-548829 + TGAATAAGCGTGTAAAGGCCA---ACTATCAGGAGCACACCAACGAAGATGTACATAGAAAA---AGTTCTA---GATACGCTGGCATTCAGTATAGCCTTCTAGTTACGGC---------------------CCAGGGCGATGATAATGAAGATG---AAGA------------------TTTAAATGCCGATGTGGCGCAACTAGTTGGCAATAAAGAAGCACCACACTTTTAAA------------A----GA----CTTACAATTT--CCATTA--------------CTCCTTTTGTTTCATTTT-GTGTTTTTTGTTTCCGATTTTA-TATCGTTATTAGTTTCTAACCCCCTCCACA----C--------ATAGAGACAC----CA-------C---------C--ACTAACCACAGAATTCAGT----T-----------TTGAGACACCTA-------------------------------------C--TACC-------ATCAACTAATC----TCAAA---------------------TTTATCCACTCCTCT-CCC----------AACCAGGACGAGCCGA-CGC--CACCACTGCCTTCC------------G---CTAACAACCAGGAGCTAAG
droKik1 scf7180000302461:603666-604087 + TGAACAAGCGAGTGAAGGCGA---ACTACCAGGAGCACACCAACGAAGATGTACATAGCAAG---CATTCTA---GATACTCGGGCATTCAGTATAGCCTCCTAGTTACGGC---------------------CCAAGGCGACGAAGAAGAAGAAGATGACGA------------------TGTTGACGCCGATGCGGCGCAACTAGTTGGCAATAAAGAAGCTCCGCACTTTTGAA------------T---AGA----CC--CAATTG--CCACAA-----CAC------CCCCTTTTGTTTCATTTT-CCGTTT-------GCGATTTCGTTT-------GAGTT-TTAACCCACACCACACTCAC--------ATAGAGACACC---AA-------C-AA----GCT--ACTAACCAAAGATCCTCGT----T-----------TTG----------------------------------AAC-CG-CA-CTT--TACCTGGCAAAACCGACTAATT----CCAAA--------------------ATTTCTCCACCCATTT-TCC----------TACCAGGACGAGCCAA-CGC--CACCCATGCCTGCC------------G---CCAACAACCAGGAGCTGAG
droFic1 scf7180000453850:564022-564424 + TGAACAAGCGAGTGAAGGCGA---ATTACCAGGAGCACACCAACGAAGATGTACATAGCAAA---CATTCTA---GATACAAGGGCATTCAGTATAGCCTCCTAGTTACAGT---------------------CCAAGGCGAAGATGATGA---TG---ACGA------------------TGTTGACGCCGATGCGGCTCAACTAGTTGGCAATAAAGAATCACCACACTTTTGAA------------T---AGA----TTT-TAATTT--CCACAA--------------CCCTTCTTGTTTCATTTT--TGTTT-------GATACTT----T-------AAGTTTCTAACCCGCTTCACCCGTCC--------ATATGGACACC---CA-------C---------C--ACTAACCCAAGACCCAAGT----T-----------TTG----------------------------------AAT-CA-CA-TCA--TGCCACGTCCGCCAGACTAATT----CCAAA---------------------TTTCTCCC-CCT-TT-TTC----------AACCAGGACGAGCCGA-CGC--CGCCTCTACCTGCA------------G---TAAATAACCAGGAGCTCAG
droEle1 scf7180000491021:294843-295256 - TGAATAAGCGAGTGAAGGCGA---ATTACCAGGAGCACACCAACGAAGATGTACATAGCAAG---CATTCTA---GATACAAGGGCATTCAGTATAGCCTCCTAGTTACAGC---------------------CCATGGCGAAGATGATGATGAAGATGACGA------------------TGTTGACGCCGATGTGGCTCAACTAGTTGGCAATAAAGAAGCACCTCACTTTTAAA------------T---AGA----TTT-TAATTT--CCACAA--------------CCCCCTTTGTTTCATTTT-CTGTTT-------GCGATTTTGATT-------GAGTTTTTAACCCACACCACCAG-------------ATACACACT---CA-------C---------CACACTAACCAAAGATCCACGC----T-----------TTG----------------------------------AAC-CGGAA-TTT--TATCACGTCAGCCCGACTAATT----CGAAA---------------------ATTTTCCCCCCCTTT-TCC----------AAACAGGATGAGCCAG-CGC--CGCCTCTGCCCGCC------------G---TGAACAACCAGGAGCTCAG
droRho1 scf7180000779349:29433-29845 - TGAACAAGCGAGTTAAGGCGA---ACTACCAGGAGCACACAAACGAAGATGTACATAACAAG---CATTCTA---GATACAAGGGCATTCAGTATAGCCTCCTAGTTACAGC---------------------CCATGGCGAAGATAATGAAGATG---ACGA------------------TGTTGACGCCGATGCGGCTCAACTAGTTGGCAATAAAGAAGCACCACACTTTTGAA------------T---AGA----TTT-TAATTT--CCACAA--------------CCCCCTTTGTTTCATTTT-CCGTTT-------GCGATTTTGATT-------GAGTTTTTAACCCACACCACCAGTCC--------ATAGAGACACT---CA-------C---------C--ACTAACCAAAGACCCACGT----T-----------TTG----------------------------------AAC-CAGAA-CCT--TTTCACGTCAGCCCGACTAATT----CAAAA---------------------TTTCTCCCCCCT-TT-TCC----------TACCAGGATGAGCCGA-CGC--CGCCTTTGCCCGCC------------G---TGAACAACCAGGAGCTCAG
droBia1 scf7180000302411:933992-934388 + TGAACAAGCGAGTGAAGGCGA---ACTACCAGGAGCACACCAACGAAGATGTACATAACAAG---CATTCTA---GATACAAGGGCATTCAATATAGCCTCCTAGTTACAGC---------------------CCAAGGCGAAGATGATGAGGCAG---ACGA------------------TGTTGACGCCGATGCGGCTCAACTAGTTGGCAATAAAGAAGCACCACTCTTTTGAA------------T---AGA----TTT-TAATTT--CCACAA--------------CCCTCTTTGTTTCATTTT-TCGTTT-------GCGATATTA-TT-------GAGTTTTTAACCCACACCACCCGTCT--------GAAGGGACACT---CA-------C---------C--ACTAACCACAT-----------------------------------------------------TT----C-AATCGA-G-GTTTTA-----GAACATCCCAACTAAAT----CGAAA---------------------TTT-TCCC--CC-TT-TCT----------AACCAGGACGAGCCGA-CGC--CGCCAATGCCCTCC------------G---TGAACAACCAGGAACTCAG
droTak1 scf7180000415789:195590-195989 - TGAACAAGCGAGTGAAGGCGA---ACTACCAGGAGCACACCAACGAAGATGTACATAACAAG---CATTCTA---GATACAAGGGCATTCAGTATAGCCTACTAGTTACAGC---------------------CCAAGGCGAAGATGATGAGGCAG---ACGA------------------AGTTGACGCCGATGCGGCTCAACTAGTTGGCAATAAAGAAGCACCACACTTTTGAA------------T---AGA----TCT-TAATTT--CCACAA--------------CCCCCTTTGTTTCATTTT-CCGTTT-------GCGATTTTGATT-------AAGTTTTTAACACACTCCACCCGTCC--------GAAGGGGCACT---CA-------C---------C--ACTAACCACA--------T---------------------------------------------TT----C-GAAAGA-TGATCTAA-----GATCT-TCCGACTAATT----CCAAA---------------------TT-CTCCCCTCC-TT-TCT----------AACCAGGACGAGCCGA-CGC--CACCCATGCCCGCT------------G---CTAACAACCAGGAGCTCAG
droEug1 scf7180000409766:100094-100501 + TAAATAAGCGAGTGAAGGCGA---ACTATCAGGAGCACACCAACGAAGATGTACATAACAAG---CATTCTA---GATACAAGGGCATTCAATATAGCCTCCTAGTTACAGC---------------------CCAAGGCGAAGATGATGAAGAAA---ATGA------------------CGTTGTCGCCGATGCGGCTCAACTAGTTGGCAATAAAGAAGCACCACATTTTTGAA------------T---AGA----TTTTTAATTT--CCACAT-----------------CCTTTGTTTCATTTT-TCGTTT-------GCGATTTTTATT-------AAGTTTTTAACCCACACCGCCCGTCT--------TTAGAGACACT---CA-------C---------C--ACTAACCAAAAATCCACGT----G-----------ATC----------------------------------AAC-CA-G-ATCTGA-----GATCACCCCGACTAATT----CCAAT---------------------TTTCTCCCTCCCTTT-TCT----------AACCAGGACGAGCCGA-CTC--CTCCCCTGCCCGCC------------G---TAAATAATCAGGAGCTCAG
dm3 chr3R:1181804-1182193 + TGAACAAGCGAGTGAAGGCGA---ACTACCAGGAGCACACCAACGAAGATGTACATAACAAG---CTTTCTA---GATACAAGGGCATTCAGTATAGCCTCCTAGTTACAGC---------------------CCAAGGCGAAGATGATGAAGATG---ACGA------------------TGTTGATGCCGAAGCGGCTCAACTAGTTGGCAATAAAGAAGCACCACTCTTTTGAA------------T---AGA----TTT-TAATTT--CCACAA--------------CCACCTTTGTTTCATTTT-GCGTTA-------TAGATTTTG-TT-------GACTTTCTAACCCACACCGTCACTTC--------ATTAAGACAGT---AA-------C--------------TAA---CACGGC--------------------------------------------------------------CA-G-ATCTTG-----GATCACCTCGACTAATT----CCACA---------------------TTTTTCCACCCT-TT-TCT----------AACCAGGATGAACCAA-CGC--CGCCCCTGCCAGCC------------G---TCAACAACCAGGAGCTCAG
droSim2 3r:1083001-1083390 + dsi_2299 TGAACAAGCGAGTGAAGGCGA---ACTACCAGGAGCACACCAACGAAGATGTACATAACAAG---CTTTCTA---GATACAAGGGCATTCAGTATAGCCTCCTAGTTACAGC---------------------CCAAGGCGAAGATGATGAAGATG---ACGA------------------TGTTGATGCCGATGCGGCTCAACTAGTTGGCAATAAAGAAGCACCACTCTTTTGAA------------T---AGA----TTT-TAATTT--CCACAA--------------CCCCCTTTGTTTCATTTT-GCGTTT-------TAGATTTTG-TT-------GACTTTCTAACCCACACCGCCACTTC--------ATTAAGACACT---AA-------C--------------TAA---CACAGC--------------------------------------------------------------CA-G-ATCTTG-----GATCACCTAGACTAATT----CCAAA---------------------TTTCTCCACCCC-TT-TCT----------AACCAGGACGAACCAA-CGC--CGCCCCTGCCAGCC------------G---TCAACAACCAGGAGCTCAG
droSec2 scaffold_6:1300921-1301304 + TGAATAAGCGAGTGAAGGCGA---ACTACCAGGAGCACACCAACGAAGATGTACATAACAAG---CTTTCTA---GATACAAGGGCATTCAGTATAGCCTCCTAGTTACAGC---------------------CCAAGGCGAAGATGATGAAGATG---ACGA------------------TGTTGATGCCGATGCGGCTCAACTAGTTGGCAATAAAGAAGCACCACTCTTTTGAA------------T---AGA----TTT-TAATTT--CCACAA--------------CCCCCTTTGTTTCATTTT-GCGTTT-------TAGATTTTG-TT-------AACTTTATAACCCACAC------TTC--------ATTAAGACACT---AA-------C--------------TAA---C-GCAGC-------------------------------------------------------------CA-G-ATCTTG-----GATCACCTAGACTAATT----CCAAA---------------------TTTCTCCACCCC-TT-TCT----------AACCAGGACGAACCAA-CGC--CGCCCATGCCAGCC------------G---TCAACAACCAGGAGCTCAG
droYak3 3R:1570425-1570813 + TGAACAAGCGAGTGAAGGCAA---ACTACCAGGAGCACACCAACGAAGATGTACATAACAAG---AATTATA---GATACAAGGGCATTCAGTATAGCCTCCTAGTTACAGC---------------------CCAAGGCGAAGATGATGAAGATA---ACGA------------------TGTTGATGCCGATGCGGCTCAACTAGTTGGCAATAAAGAAGCACCACTCTTTTAAA------------T---AGA----TTT-TAATTT--CCACAA--------------CCCCCTTTGTTTCATTTT-ATGTTT-------TAGATTTCA-TT-------AACTTCTTAACCAACACCGTCAATTC--------ATTAAGACACT---AA-------C------------------CACATAGC--------------------------------------------------------------CA-G-ATCTTG-----GACCACCTTGACTAATT----CCAAA---------------------TTTCTCCACCCC-TT-TCT----------AACCAGGACGAACCAG-CCC--CGCCTTTGCCCTCC------------G---TTAACAACCAGGAGCTCAG
droEre2 scaffold_4770:1451106-1451494 + TGAACAAGCGAGTGAAGGCGA---ACTACCAGGAGCACACCAACGAAGATGTACATAACAAG---CATTCTA---GATACAAGGGCATTCAGTATAGCCTTCTAGTTACAGC---------------------CCAAGGCGCAGATGATGATGATG---AAGA------------------TGTTGATGCCGATGCGGCTCAACTAGTTGGCAATAAAGAAGCACCACTCTTTTGAA------------T---AGA----TTT-TAATTT--CGACAA--------------CCCCCTTTGTTTCATTTT-ATGTTT-------TAGATTTTG-TT-------GACTTCTTAACCCACACCGCCAATTC--------ATTAAGACACT---AA-------C------------------CGCATAGC--------------------------------------------------------------CA-G-ATCTTG-----GATCACCTCGACTAATC----CCAAA---------------------TTTCTCCACCCC-TT-TCT----------AACCAGGACGAACCGA-CCC--CGCCTTTGCCATCC------------G---TTAACAACCAGGAGCTCAG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TTAACAAACGCGTCAAGGCTAACAATTATCAGGAGCACACCAATGAAGATGTACATAACAAA---TATTCTA---AATATGCAGGCATTAAATATAGTCGACTAGC---CGC---------------------TTATCCTGCCGTTGATGACGACA---------------------------GT---GATGATGAGGCGCAGCTAGTTGGCAATAAAGAAGCACACAACGTTTGACGCCGTTTGCCAAA---CGA----TTT-ATATAG--AA--AT--------------ACTTTATTGTTTTATTTT-ATT--T-------AAT------------------GCTTTTAACATACG--------------------------------CA-------C----------GTGCTAACCAAAGTTTTTTGT----T-----TATGTGTTA-----ACCA--------------------------A-------------TAAC-G---GCCTCAAATAATTCGCTTCAAA---------------------TTT-TCCTTCTT-TT-TCT--GCTGCGCCTCCTAGGACGAACCCA-CAC--CGCCTATACCCGCT------------GGCCCCAACAATCAAGAGCTAAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............................................................................................................................................................................................GATGAGGCGCAGCTAGTTGGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002001000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................AATAAAGAAGCACACAACGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002002000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCGCTTCAAA---------------------TTT-TCCT............................................................................................2012.002000000000000000000000000000000000000000000000000000000000000002
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--CGCCTATACCCGCT------------GGCCCCAAC..............2411.001000000000000000000000000000000000000000000000000000000000000001
......................................................................................................................................................................................................................................GTTTGACGCCGTTTGCCAAA---C..............................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000001
..........................TATCAGGAGCACACCAATGAAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000100000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCCCAACAATCAAGAG.....1811.001000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................................ATGAGGCGCAGCTAGTTGGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..................CTAACAATTATCAGGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000001000000000000000000000000000000
..................................GCACACCAATGAAGATGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.331000000000000000000000000000001000000000000000000000000000000000
droMoj3
TAAACAAACGCGTCAAGACGAACAACTATCAGGAGCACACCAATGAAGATGTACATAACACT---TATTCTA---AATATGCAGGCATAAAATATAGTCAACTAGTTGCTAC---------------------TCCTGATGATGATGATGATGATG---ATGTTGATCGTTATCATGATCATGATGATGATGATGAGACGCAGCTAGTTGGCAATAAAGAAACACTTAGCGTTTGATGCCTAATGGCAAAAGGCGA----TTT-ATATATATGTATAC--------------ATCTTTTTGTTTTATTTT-ATT--T-------AATATTT-----------------TTCAATTCGCAC---------------------------------------------------GCTCTAACCCAAAGTCTTTGT----TGTGTTTATTAATTA-----------ACCC--------------------A----------T--TACCCG---GTCTTAACTAATACGCTTCAAA---------------------TTT-TCCTTCTA-TT-TTT--GCTGCGGCTGATAGGACGAACCAG-CTC--CGCCTCTGCCAGCT------------AGTGCCAACAATCAAGAGCTGAGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................................................................................................................................................................................CATGATGATGATGATGAGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.003020010
...........................................................................................................GCTAC---------------------TCCTGATGATGATGATGAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCTCTGCCAGCT------------AGTGCCAAC..............2311.001100000
..............................................................................................................................................................................................................................CACTTAGCGTTTGATGCCTAATGGCAAA..................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
.........................................AATGAAGATGTACATAACAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG-CTC--CGCCTCTGCCAGC....................................1811.001100000
..................................................................................................................................................................TTGATCGTTATCATGATCATGATGATG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
............TCAAGACGAACAACTATCAGGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
...........GTCAAGACGAACAACTATCAGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.........................CTATCAGGAGCACACCAATGAAGATGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
............................................................................................................CTAC---------------------TCCTGATGATGATGATGAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
...............................................................................................................................................................................................................................ACTTAGCGTTTGATGCCT...........................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
...........................................................................................................................................................G---ATGTTGATCGTTATCATGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
......................................................................................................................................CCTGATGATGATGATGATGATG---.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2240.251010000
...........................................................................................................................................TGATGATGATGATGATG---ATGTTGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24130.152010001
............................................................................................................................................GATGATGATGATGATG---ATGTTGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23190.051000001
...............................................................................................................................................GATGATGATGATG---ATGTTGAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000001
................................................................................................................................................ATGATGATGATG---ATGTTGAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000001
droGri2
TGAATAAACGCGTCAAGGCCAACAATTATCAGGAGCACACCAATGAAGATGTACAGTTGAGA---TCTATTC---GATATTCAGGCATTAAATATAGTCGACTAGCCGCTAATCCTGCCATCGGTGACATCAGTCATGATGATGATGATGATGATA---ATGA---TATTGATCATGA---TGATGATGACGATGATGAGCAGCTAGTTGGCAATAAAGAAGCACACAACTTT-------------------------------TAAGTT--TCACATCGAGACATA-----TTTTATTTGTTTTATTTT-ATGTTATT-----TCGTTTTTCACTTTGTT--G--TTACTAACAC-------------------------------T---CAAGCATGTC---------T--CCTAACAAAAGCCGTT----------------------------------------TATTTCTGTTGTTTTCAAT-GA-CA-TTT--TT---------ACTAATTTTTG----CTAAAAATAACCTTTCTCTTCTCGTATCTCTCTTCCTT-TTTTTG-TACTGCATCTGGTAGGATGAGCCCAGTGCCCCCCCACCGCCCGTC------------GGCAGCAACAATCAGGAGCTGAGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.......ACGCGTCAAGGCCAACAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110
..................................................................................................................................................................A---TATTGATCATGA---TGATGATGACG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101
...............................................................................................................................................................................TGA---TGATGATGACGATGATG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.10202
droWil2
TGAACAAGCGTGTTAAGGCCA---ACTATCAGGAGCACACCAATGAAGATGTACATATGAAATCATATTCTA---AATATGCAGGCATACAATATAGTTTACTCGTAACAGT---------------------CCATGATGATCATA---CCAATA---ATGA---TCGTGATAATAATGAAGATGATGATGATGAAGAT---------------------------CGCATTTGAA------------T---AGAAATTTTT-TGATTT--TTATAG--AAAAATCTTTTGTCTTTTTTGTTTCATTTC-CTGTAT-------------------------------TCTAACCTCCTGTATC----CATTGCTGCACCCCCACAGTCCAGA-------CTAACACC--A--ACTCACTCTAAGTT--------------------------------------------------------------TA-G-TTTTT------GGTTAATTCAACTAATA----CGTGG--------------------GATATGCTATATA--T-G----------TTTTACAGGATGAACCGA-CAC--CGCCCATGCCAGCAGCATCCACATCGG---CCAACAATCAAGAGTTAAGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAACCGA-CAC--CGCCC............................................1811.00110000
..........................TATCAGGAGCACACCAATGAAGATGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
...........GTTAAGGCCA---ACTATCAGGAGCACAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATA----CGTGG--------------------GATATGCTATAT.........................................................................................2211.00100001
.................................................................................................................................................................................................................................................................ATTTTT-TGATTT--TTATAG--A...................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
.........................................................................................................................................................................................GATGATGATGAAGAT---------------------------CGCAT....................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
TGAACAAGCGTGTTAAGGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100001
.......GCGTGTTAAGGCCA---ACTATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCACATCGG---CCAACAATCAAGA......2411.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACTAATA----CGTGG--------------------GATATGCTA............................................................................................2311.00100010
..........................................................................................................................................................TA---ATGA---TCGTGATAATAATGAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
............................................................................................................................................................................................GATGATGAAGAT---------------------------CGCATTTGAA------------T---AGAA...........................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100
..................................................................................................TTACTCGTAACAGT---------------------CCATGATGATC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
...........................................................................................................................................................A---ATGA---TCGTGATAATAATGAAGATGAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100
.GAACAAGCGTGTTAAGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
.................................................................................................................................................................GA---TCGTGATAATAATGAAGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
................................................................................................................................................................................AATGAAGATGATGATGATGAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.50100001
...................................................................................................................................................................................GAAGATGATGATGATGAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................18140.07100010
dp5
TGAATAAGCGCGTAAAGGCCA---ATTACCAGGAGCACACCAATGAAGATGTACATAGCAAA---CATTCTAAGAAATATGCAGGCATACAGTATAGTCTACTAGTTACAGC---------------------CCCTGATATTGATGATGATG---------------------------------------ATGAGGCTGAACTAGTTGACAATAAAGAAGCACCACACATTTGAA------------T---AGA----TTT-TATTTG--CG--AA--------------CCTTTTTTGTTTCATTTTTACGTTT-------ATGTT--------------C---CCCTAACCCCCCGCACCC---CATCGCCTCGCCGCGACAC----A---------------------ACTAACCCACTGATTGAGTTCCTT-----------TTAAGCCACAACCAACTCATTAATTTCCTTT---------------------------ATT-CCCCAACTAATG----CGAAA---------------------ATCTTTCACCT--TT-TCTTTTCTG--CCTCCCAGGATGAGCCGA-CAC--CGCCCATGCCCGCC------------G---CCACTAACCAAGAGCTCAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................................................GATGATGATG---------------------------------------ATGAGGCTGAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................2219.0090020100051
............................................................................................................................................ATTGATGATGATG---------------------------------------ATGAGGCTGAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................2514.0040010000030
...............................................................................................................................................GATGATGATG---------------------------------------ATGAGGCTGAACC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020020000000
...............................................................................................................................................GATGATGATG---------------------------------------ATGAGGCTGAACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020110000000
..................................................................................................................................................GATGATG---------------------------------------ATGAGGCTGAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020010100000
........CGCGTAAAGGCCA---ATTACCAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
................GGCCA---ATTACCAGGAGCACAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.................................................................................................................................................TGATGATG---------------------------------------ATGAGGCTGAACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000001
...................................................................................................................................................................................................AGGCTGAACTAGTTGACAAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.................................................................................................................................................................................................TGAGGCTGAACTAGTTGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
..........................TACCAGGAGCACACCAATGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..................................................................................................................................................GATGATG---------------------------------------ATGAGGCTGAACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010000000
........................................................................................................................................................G---------------------------------------ATGAGGCTGAACTAGTTGACAATA....................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
droPer2
TGAATAAGCGCGTAAAGGCCA---ATTACCAGGAGCACACCAATGAAGATGTACATAGCAAA---CATTCTAAGAAATATGCAGGCATACAGTATAGTCTACTAGTTACAGC---------------------CCCTGATATTGATGATGATG---------------------------------------ATGAGGCTGAACTAGTTGACAATAAAGAAGCACCACACATTTGAA------------T---AGA----TTT-TAATTG--CG--AA--------------CCTTTTTTGTTTCATTTTTACGTTT-------ATGTT--------------C---CCCTAACCCCCCGCACCC---CATCGCCTCGCCGCGACAC----A---------------------ACTAACCCACTGACTGAGTTTCTT-----------TTAAGCCACAACCAACCCATTAATTTCCTTT---------------------------ATT-CCCCAACTAATG----CGAAA---------------------ATCTTTCACCT--TT-TCTTTTCTG--CCTCCCAGGATGAGCCGA-CAC--CGCCCATGCCCGCC------------G---CCACTAACCAAGAGCTCAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................................................................................................................................GATGATGATG---------------------------------------ATGAGGCTGAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................22111.00111010000
..................................................................................................................................................GATGATG---------------------------------------ATGAGGCTGAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.004400000
.....................................................................................................................................................GATG---------------------------------------ATGAGGCTGAACTAGTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.004300001
...............................................................................................................................................GATGATGATG---------------------------------------ATGAGGCTGAACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
droAna3
TAAATAAGCGAGTTAAGGCCA---ACTATCAGGAGCACACCAACGAAGATGTACATAGAAAA---AGTTCTA---GATACGCTGGCATTCAGTATAGCCTCCTAGTTACGGC---------------------CCAGGGCGATGATAATGATGATG---AAGA------------------TTTTAATGCCGATGTGGCGCAACTAGTTGGCAATAAAGAAGCACCACACTTTTAAA------------A---AGA----CTTCCAATTT--CCATTA--------------CTCCTTTTGTTTCATTTT-GTGTTT-CCGTTTCCGATTTTA-TTTCGTTATTAGTTTCTAACCCC-TCCTCA----C--------ATAGAGACAC----CA-------C---------C--ACTAACCACAGAATTCAGT----T-----------TTGAGAAACCTA-------------------------------------C--TACC-------ATGAACTAATC----GCAAA---------------------TTTATCCACTCCTCT-CCC----------AACCAGGACGAACCGA-CGC--CACCACTGCCCTCC------------G---CTAACAACCAGGAGCTGAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................................................................................................................................................................................................GCAACTAGTTGGCAATAAAGAAGCACC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------TTTATCCACTCCTCT-CCC----------AACCAGGAC..............................................................2811.001100000
...........................................................AAA---AGTTCTA---GATACGCTGGCATTCAGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
...............................GGAGCACACCAACGAAGATGTACATAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAACCGA-CGC--CACCACTGCCCTCC------------.......................2711.001100000
droBip1
TGAATAAGCGTGTAAAGGCCA---ACTATCAGGAGCACACCAACGAAGATGTACATAGAAAA---AGTTCTA---GATACGCTGGCATTCAGTATAGCCTTCTAGTTACGGC---------------------CCAGGGCGATGATAATGAAGATG---AAGA------------------TTTAAATGCCGATGTGGCGCAACTAGTTGGCAATAAAGAAGCACCACACTTTTAAA------------A----GA----CTTACAATTT--CCATTA--------------CTCCTTTTGTTTCATTTT-GTGTTTTTTGTTTCCGATTTTA-TATCGTTATTAGTTTCTAACCCCCTCCACA----C--------ATAGAGACAC----CA-------C---------C--ACTAACCACAGAATTCAGT----T-----------TTGAGACACCTA-------------------------------------C--TACC-------ATCAACTAATC----TCAAA---------------------TTTATCCACTCCTCT-CCC----------AACCAGGACGAGCCGA-CGC--CACCACTGCCTTCC------------G---CTAACAACCAGGAGCTAAGSizeHit CountTotal NormTotal
No Reads
droKik1
TGAACAAGCGAGTGAAGGCGA---ACTACCAGGAGCACACCAACGAAGATGTACATAGCAAG---CATTCTA---GATACTCGGGCATTCAGTATAGCCTCCTAGTTACGGC---------------------CCAAGGCGACGAAGAAGAAGAAGATGACGA------------------TGTTGACGCCGATGCGGCGCAACTAGTTGGCAATAAAGAAGCTCCGCACTTTTGAA------------T---AGA----CC--CAATTG--CCACAA-----CAC------CCCCTTTTGTTTCATTTT-CCGTTT-------GCGATTTCGTTT-------GAGTT-TTAACCCACACCACACTCAC--------ATAGAGACACC---AA-------C-AA----GCT--ACTAACCAAAGATCCTCGT----T-----------TTG----------------------------------AAC-CG-CA-CTT--TACCTGGCAAAACCGACTAATT----CCAAA--------------------ATTTCTCCACCCATTT-TCC----------TACCAGGACGAGCCAA-CGC--CACCCATGCCTGCC------------G---CCAACAACCAGGAGCTGAGSizeHit CountTotal NormTotal
No Reads
droFic1
TGAACAAGCGAGTGAAGGCGA---ATTACCAGGAGCACACCAACGAAGATGTACATAGCAAA---CATTCTA---GATACAAGGGCATTCAGTATAGCCTCCTAGTTACAGT---------------------CCAAGGCGAAGATGATGA---TG---ACGA------------------TGTTGACGCCGATGCGGCTCAACTAGTTGGCAATAAAGAATCACCACACTTTTGAA------------T---AGA----TTT-TAATTT--CCACAA--------------CCCTTCTTGTTTCATTTT--TGTTT-------GATACTT----T-------AAGTTTCTAACCCGCTTCACCCGTCC--------ATATGGACACC---CA-------C---------C--ACTAACCCAAGACCCAAGT----T-----------TTG----------------------------------AAT-CA-CA-TCA--TGCCACGTCCGCCAGACTAATT----CCAAA---------------------TTTCTCCC-CCT-TT-TTC----------AACCAGGACGAGCCGA-CGC--CGCCTCTACCTGCA------------G---TAAATAACCAGGAGCTCAGSizeHit CountTotal NormTotal
No Reads
droEle1
TGAATAAGCGAGTGAAGGCGA---ATTACCAGGAGCACACCAACGAAGATGTACATAGCAAG---CATTCTA---GATACAAGGGCATTCAGTATAGCCTCCTAGTTACAGC---------------------CCATGGCGAAGATGATGATGAAGATGACGA------------------TGTTGACGCCGATGTGGCTCAACTAGTTGGCAATAAAGAAGCACCTCACTTTTAAA------------T---AGA----TTT-TAATTT--CCACAA--------------CCCCCTTTGTTTCATTTT-CTGTTT-------GCGATTTTGATT-------GAGTTTTTAACCCACACCACCAG-------------ATACACACT---CA-------C---------CACACTAACCAAAGATCCACGC----T-----------TTG----------------------------------AAC-CGGAA-TTT--TATCACGTCAGCCCGACTAATT----CGAAA---------------------ATTTTCCCCCCCTTT-TCC----------AAACAGGATGAGCCAG-CGC--CGCCTCTGCCCGCC------------G---TGAACAACCAGGAGCTCAGSizeHit CountTotal NormTotal
No Reads
droRho1
TGAACAAGCGAGTTAAGGCGA---ACTACCAGGAGCACACAAACGAAGATGTACATAACAAG---CATTCTA---GATACAAGGGCATTCAGTATAGCCTCCTAGTTACAGC---------------------CCATGGCGAAGATAATGAAGATG---ACGA------------------TGTTGACGCCGATGCGGCTCAACTAGTTGGCAATAAAGAAGCACCACACTTTTGAA------------T---AGA----TTT-TAATTT--CCACAA--------------CCCCCTTTGTTTCATTTT-CCGTTT-------GCGATTTTGATT-------GAGTTTTTAACCCACACCACCAGTCC--------ATAGAGACACT---CA-------C---------C--ACTAACCAAAGACCCACGT----T-----------TTG----------------------------------AAC-CAGAA-CCT--TTTCACGTCAGCCCGACTAATT----CAAAA---------------------TTTCTCCCCCCT-TT-TCC----------TACCAGGATGAGCCGA-CGC--CGCCTTTGCCCGCC------------G---TGAACAACCAGGAGCTCAGSizeHit CountTotal NormTotal
No Reads
droBia1
TGAACAAGCGAGTGAAGGCGA---ACTACCAGGAGCACACCAACGAAGATGTACATAACAAG---CATTCTA---GATACAAGGGCATTCAATATAGCCTCCTAGTTACAGC---------------------CCAAGGCGAAGATGATGAGGCAG---ACGA------------------TGTTGACGCCGATGCGGCTCAACTAGTTGGCAATAAAGAAGCACCACTCTTTTGAA------------T---AGA----TTT-TAATTT--CCACAA--------------CCCTCTTTGTTTCATTTT-TCGTTT-------GCGATATTA-TT-------GAGTTTTTAACCCACACCACCCGTCT--------GAAGGGACACT---CA-------C---------C--ACTAACCACAT-----------------------------------------------------TT----C-AATCGA-G-GTTTTA-----GAACATCCCAACTAAAT----CGAAA---------------------TTT-TCCC--CC-TT-TCT----------AACCAGGACGAGCCGA-CGC--CGCCAATGCCCTCC------------G---TGAACAACCAGGAACTCAGSizeHit CountTotal NormTotal
No Reads
droTak1
TGAACAAGCGAGTGAAGGCGA---ACTACCAGGAGCACACCAACGAAGATGTACATAACAAG---CATTCTA---GATACAAGGGCATTCAGTATAGCCTACTAGTTACAGC---------------------CCAAGGCGAAGATGATGAGGCAG---ACGA------------------AGTTGACGCCGATGCGGCTCAACTAGTTGGCAATAAAGAAGCACCACACTTTTGAA------------T---AGA----TCT-TAATTT--CCACAA--------------CCCCCTTTGTTTCATTTT-CCGTTT-------GCGATTTTGATT-------AAGTTTTTAACACACTCCACCCGTCC--------GAAGGGGCACT---CA-------C---------C--ACTAACCACA--------T---------------------------------------------TT----C-GAAAGA-TGATCTAA-----GATCT-TCCGACTAATT----CCAAA---------------------TT-CTCCCCTCC-TT-TCT----------AACCAGGACGAGCCGA-CGC--CACCCATGCCCGCT------------G---CTAACAACCAGGAGCTCAGSizeHit CountTotal NormTotal
No Reads
droEug1
TAAATAAGCGAGTGAAGGCGA---ACTATCAGGAGCACACCAACGAAGATGTACATAACAAG---CATTCTA---GATACAAGGGCATTCAATATAGCCTCCTAGTTACAGC---------------------CCAAGGCGAAGATGATGAAGAAA---ATGA------------------CGTTGTCGCCGATGCGGCTCAACTAGTTGGCAATAAAGAAGCACCACATTTTTGAA------------T---AGA----TTTTTAATTT--CCACAT-----------------CCTTTGTTTCATTTT-TCGTTT-------GCGATTTTTATT-------AAGTTTTTAACCCACACCGCCCGTCT--------TTAGAGACACT---CA-------C---------C--ACTAACCAAAAATCCACGT----G-----------ATC----------------------------------AAC-CA-G-ATCTGA-----GATCACCCCGACTAATT----CCAAT---------------------TTTCTCCCTCCCTTT-TCT----------AACCAGGACGAGCCGA-CTC--CTCCCCTGCCCGCC------------G---TAAATAATCAGGAGCTCAGSizeHit CountTotal NormTotal
No Reads
dm3
TGAACAAGCGAGTGAAGGCGA---ACTACCAGGAGCACACCAACGAAGATGTACATAACAAG---CTTTCTA---GATACAAGGGCATTCAGTATAGCCTCCTAGTTACAGC---------------------CCAAGGCGAAGATGATGAAGATG---ACGA------------------TGTTGATGCCGAAGCGGCTCAACTAGTTGGCAATAAAGAAGCACCACTCTTTTGAA------------T---AGA----TTT-TAATTT--CCACAA--------------CCACCTTTGTTTCATTTT-GCGTTA-------TAGATTTTG-TT-------GACTTTCTAACCCACACCGTCACTTC--------ATTAAGACAGT---AA-------C--------------TAA---CACGGC--------------------------------------------------------------CA-G-ATCTTG-----GATCACCTCGACTAATT----CCACA---------------------TTTTTCCACCCT-TT-TCT----------AACCAGGATGAACCAA-CGC--CGCCCCTGCCAGCC------------G---TCAACAACCAGGAGCTCAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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............................................................................................................................................GAAGATGATGAAGATG---ACGA------------------TGTTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000001000000000000000000000000000000000000000000
................................................................................................................................................ATGATGAAGATG---ACGA------------------TGTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000
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..........................................................................................................................................................................................................................................................................................................................................TTG-TT-------GACTTTCTAACCCACA.....................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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............TGAAGGCGA---ACTACCAGGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000100000000000
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..........................................................CAAG---CTTTCTA---GATACAAGGGCATTCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..............................AGGAGCACACCAACGAAGATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
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..............................................................................................................................................................................................CGAAGCGGCTCAACTAGTTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
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................................................................................................................................................................................................AAGCGGCTCAACTAGTTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................AGGAGCACACCAACGAAGATGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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........................................................................................................................................................................................................CAACTAGTTGGCAATAAAGAAGCACCACTC......................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................CGAAGATGATGAAGATG---ACGA------------------TG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
....................................................................................................CCTAGTTACAGC---------------------CCAAGGCGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.....................................................................................................................................CCAAGGCGAAGATGATGAAGATG---ACGA------------------TG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-CGC--CGCCCCTGCCAGCC------------G---TCACT..............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................C---------------------CCAAGGCGAAGATGATGAAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................CATTTT-GCGTTA-------TAGATTTTG-..............................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
.......GCGAGTGAAGGCGA---ACTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
............................................................................................TATAGCCTCCTAGTTACAGC---------------------CCAAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................TTCTA---GATACAAGGGCATTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................CGAAGCGGCTCAACTAGTTGGCAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-TCT----------AACCAGGATGAACCA........................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGGATGAACCAA-CGC--CGC..............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................CCAAGGCGAAGATGATGAAGATG---ACG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TACCAGGAGCACACCAACGAAGATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............................AGGAGCACACCAACGAAGATGATG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2421.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---TCAACAACCAGGAGCTCAG2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ACTACCAGGAGCACACCAACG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
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....................................................................................................................................................................................................................................................................................................................TT-GCGTTA-------TAGATTTTG-TT-------GA...................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
....................A---ACTACCAGGAGCACACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACTAATT----CCACA---------------------TTTTTCCACC..........................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...........................ACCAGGAGCACACCAACGAAGATGTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------------G---TCAACAACCAGGAGCTCAG2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.........................CTACCAGGAGCACACCAACGAAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................CAAGGGCATTCAGTATAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............................................................................ACAAGGGCATTCAGTATAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
............TGAAGGCGA---ACTACCAGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................TAGTTACAGC---------------------CCAAGGCGAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................AGTTACAGC---------------------CCAAGGCGAAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
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....................................................................................................................................................................................................................................................................................................................................................................ACACCGTCACTTC--------ATTAAGAC...........................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................ATGCCGAAGCGGCTCAACTAGTTGGCAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.............GAAGGCGA---ACTACCAGGAGCACACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.............................................................G---CTTTCTA---GATACAAGGGCATTCAGTAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................ACTAGTTGGCAATAAAGAAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................CCTAGTTACAGC---------------------CCAAGGCGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................ACGA------------------TGTTGATGCCGAAGCGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.......................................................TAACAAG---CTTTCTA---GATACAAGGGCAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCC------------G---TCAACAACCAGGAGC....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-CGC--CGCCCCTGCCAGCC------------G---TC.................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............AGGCGA---ACTACCAGGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-TT-TCT----------AACCAGGATGAACCA........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.GAACAAGCGAGTGAAGGCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................TACCAGGAGCACACCAACGAAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GGCGA---ACTACCAGGAGCACACCAACGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...ACAAGCGAGTGAAGGCGA---....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................CGAAGATGATGAAGATG---A............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
...................GA---ACTACCAGGAGCACACCAACGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CGA---ACTACCAGGAGCACACCAACG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........AGTGAAGGCGA---ACTACCAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................GCGA---ACTACCAGGAGCACAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
TGAACAAGCGAGTGAAGGCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CGA---ACTACCAGGAGCACACCAACGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................CACCTTTGTTTCATTTT-GCGT.................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.............GAAGGCGA---ACTACCAGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................GCCTCCTAGTTACAGC---------------------CC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGCC------------G---TCAACAACCAGGAGCT...2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................TTTCTA---GATACAAGGGCATTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CCAGGAGCACACCAACGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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......................................................................TA---GATACAAGGGCATTCAGTAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..........................................................................................................................................................................................................ACTAGTTGGCAATAAAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.............................................................................TACAAGGGCATTCAGTATAGCCTCCTAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................TTTGAA------------T---AGA----TTT-TAATTT--CCACA.......................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
...................GA---ACTACCAGGAGCACACCAACGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................ACCAGGAGCACACCAACGAAGATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.................................................................................................................................................TGATGAAGATG---ACGA------------------TGTTGATGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.......GCGAGTGAAGGCGA---ACTACCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................AAGATG---ACGA------------------TGTTGATGCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................CACTTC--------ATTAAGACAGT---AA-------C--------------TAA---CACGGC--------------------------------------------------------------...................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACCAA-CGC--CGCCCCTGCCAGCC------------.......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................TTTT-GCGTTA-------TAGATTTTG-TT-------.....................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..................................................................................................CTCCTAGTTACAGC---------------------CCAAGGCGAAGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................AGGCGAAGATGATGAAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................GAAGATGATGAAGATG---ACGA------------------A......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
droSim2
TGAACAAGCGAGTGAAGGCGA---ACTACCAGGAGCACACCAACGAAGATGTACATAACAAG---CTTTCTA---GATACAAGGGCATTCAGTATAGCCTCCTAGTTACAGC---------------------CCAAGGCGAAGATGATGAAGATG---ACGA------------------TGTTGATGCCGATGCGGCTCAACTAGTTGGCAATAAAGAAGCACCACTCTTTTGAA------------T---AGA----TTT-TAATTT--CCACAA--------------CCCCCTTTGTTTCATTTT-GCGTTT-------TAGATTTTG-TT-------GACTTTCTAACCCACACCGCCACTTC--------ATTAAGACACT---AA-------C--------------TAA---CACAGC--------------------------------------------------------------CA-G-ATCTTG-----GATCACCTAGACTAATT----CCAAA---------------------TTTCTCCACCCC-TT-TCT----------AACCAGGACGAACCAA-CGC--CGCCCCTGCCAGCC------------G---TCAACAACCAGGAGCTCAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................GA---ACTACCAGGAGCACACCAACGAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.00300210000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCC------------G---TCAACAACCAGGAGC....2112.00220000000000000000
......................................................ATAACAAG---CTTTCTA---GATACAAGGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000000000
...............................................................................................................................................GATGATGAAGATG---ACGA------------------TGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
.......................................................................................................................................................................................................................................................................................................................................ATTTTG-TT-------GACTTTCTAACCC........................................................................................................................................................................................................................................................................................................2111.00110000000000000000
...........................................................AAG---CTTTCTA---GATACAAGGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
.....................................................................................................................................................GAAGATG---ACGA------------------TGTTGATGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
droSec2
TGAATAAGCGAGTGAAGGCGA---ACTACCAGGAGCACACCAACGAAGATGTACATAACAAG---CTTTCTA---GATACAAGGGCATTCAGTATAGCCTCCTAGTTACAGC---------------------CCAAGGCGAAGATGATGAAGATG---ACGA------------------TGTTGATGCCGATGCGGCTCAACTAGTTGGCAATAAAGAAGCACCACTCTTTTGAA------------T---AGA----TTT-TAATTT--CCACAA--------------CCCCCTTTGTTTCATTTT-GCGTTT-------TAGATTTTG-TT-------AACTTTATAACCCACAC------TTC--------ATTAAGACACT---AA-------C--------------TAA---C-GCAGC-------------------------------------------------------------CA-G-ATCTTG-----GATCACCTAGACTAATT----CCAAA---------------------TTTCTCCACCCC-TT-TCT----------AACCAGGACGAACCAA-CGC--CGCCCATGCCAGCC------------G---TCAACAACCAGGAGCTCAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................TACCAGGAGCACACCAACGAAGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
..................CGA---ACTACCAGGAGCACACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
......................................................ATAACAAG---CTTTCTA---GATACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
......................................................................................................................................................................................GTTGATGCCGATGCGGCTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000
....................A---ACTACCAGGAGCACACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
........................................................................................................................................AGGCGAAGATGATGAAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001
.........GAGTGAAGGCGA---ACTACCAGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
................................GAGCACACCAACGAAGATGACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2230.3310010
droYak3
TGAACAAGCGAGTGAAGGCAA---ACTACCAGGAGCACACCAACGAAGATGTACATAACAAG---AATTATA---GATACAAGGGCATTCAGTATAGCCTCCTAGTTACAGC---------------------CCAAGGCGAAGATGATGAAGATA---ACGA------------------TGTTGATGCCGATGCGGCTCAACTAGTTGGCAATAAAGAAGCACCACTCTTTTAAA------------T---AGA----TTT-TAATTT--CCACAA--------------CCCCCTTTGTTTCATTTT-ATGTTT-------TAGATTTCA-TT-------AACTTCTTAACCAACACCGTCAATTC--------ATTAAGACACT---AA-------C------------------CACATAGC--------------------------------------------------------------CA-G-ATCTTG-----GACCACCTTGACTAATT----CCAAA---------------------TTTCTCCACCCC-TT-TCT----------AACCAGGACGAACCAG-CCC--CGCCTTTGCCCTCC------------G---TTAACAACCAGGAGCTCAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................................................................................GAAGATGATGAAGATA---ACGA------------------TGTTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000
...................................................................................................................................................ATGAAGATA---ACGA------------------TGTTGATGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAACCAG-CCC--CGCCTTTGCC.......................................2111.00101000000000
...................AA---ACTACCAGGAGCACACCAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
..........................................................................................................TACAGC---------------------CCAAGGCGAAGATGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.GAACAAGCGAGTGAAGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000
...............................................................................................................................................................ACGA------------------TGTTGATGCCGATGCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
.GAACAAGCGAGTGAAGGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
.....AAGCGAGTGAAGGCAA---ACTACCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
droEre2
TGAACAAGCGAGTGAAGGCGA---ACTACCAGGAGCACACCAACGAAGATGTACATAACAAG---CATTCTA---GATACAAGGGCATTCAGTATAGCCTTCTAGTTACAGC---------------------CCAAGGCGCAGATGATGATGATG---AAGA------------------TGTTGATGCCGATGCGGCTCAACTAGTTGGCAATAAAGAAGCACCACTCTTTTGAA------------T---AGA----TTT-TAATTT--CGACAA--------------CCCCCTTTGTTTCATTTT-ATGTTT-------TAGATTTTG-TT-------GACTTCTTAACCCACACCGCCAATTC--------ATTAAGACACT---AA-------C------------------CGCATAGC--------------------------------------------------------------CA-G-ATCTTG-----GATCACCTCGACTAATC----CCAAA---------------------TTTCTCCACCCC-TT-TCT----------AACCAGGACGAACCGA-CCC--CGCCTTTGCCATCC------------G---TTAACAACCAGGAGCTCAGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................................................................................................................................GCAGATGATGATGATG---AAGA------------------TGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000110
............................................................................................................................................................................................................TAGTTGGCAATAAAGAAGCACCACTCTTT...................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACCGA-CCC--CGCCTTTGCCATCC------------G---...................2511.0011000000
..................................................................................................................................................GATGATGATG---AAGA------------------TGTTGATGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
...................................................................TTCTA---GATACAAGGGCATTCAGTATAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010010000
.GAACAAGCGAGTGAAGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000100
...........................................................................................................................................CGCAGATGATGATGATG---AAGA------------------TGTTGAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAACCGA-CCC--CGCCTTT..........................................2011.0011000000
..................................................GTACATAACAAG---CATTCTA---.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
.........................................................................................................................................................ATG---AAGA------------------TGTTGATGCCGATGCGGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
......AGCGAGTGAAGGCGA---ACTACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
............................................................................................................................................GCAGATGATGATGATG---AA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010001000
..................................GCACACCAACGAAGATGACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2080.1310000010
...............................................................................................................................................GATGATGATGATG---AAGA------------------T......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1890.1110000010

Generated: 05/19/2015 at 01:05 PM