ID:

dvi_458

 Coordinate:

scaffold_12734:487871-487951 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-16.7 -16.5 -16.4

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
TART_DVLINEJockey+
mature
  1. dvi_458  scaffold_12734:487930-487950 +
  2. scaffold_13561:115503-115523 +
star

Sense Strand Reads

CACTCCACTCGGCAAAAGCCACTTTGCGGGACCAGCTCAACACAACTGCTGGTCCCCAAAGCGCCAGAAGCTCGTACAAAAACAGCAACAACGGCAATAATGCCTGCGCAGAACATGGCTGGGTACACGGCAGCTGCAAATGCCCCACAGGCTGGGAATATGGCTCCTGCTCTCCTGCATT
*****************************************************************...................(((....((((.....(((((((.(((.......))).)))...))))))))....)))..************************************ 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060674
9x140_ovaries_total
 SRR060675
140x9_ovaries_total
 SRR060676
9xArg_ovaries_total
 M027
male body		 V053
head
 SRR060673
9_ovaries_total
 SRR060662
9x160_0-2h_embryos_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060685
9xArg_0-2h_embryos_total
 M061
embryo
 SRR060670
9_testes_total
 SRR060688
160_ovaries_total
 SRR060656
9x160_ovaries_total
 SRR060658
140_ovaries_total
 SRR060663
160_0-2h_embryos_total
 SRR060672
9x160_females_carcasses_total
 SRR060679
140x9_testes_total
 SRR1106729
mixed whole adult body
 SRR060678
9x140_testes_total
 SRR060687
9_0-2h_embryos_total
 SRR060654
160x9_ovaries_total
 SRR060683
160_testes_total
 SRR060689
160x9_testes_total
 V047
embryo
 SRR060671
9x160_males_carcasses_total
.............................................................................................................AGAACATGGCTGGGTACACGG................................................... 21 0 2 14.50 29 12 2 1 3 3 0 3 2 0 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..................................GCTCAACACAACTGCTGGTCCCC............................................................................................................................ 23 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................AGAACATGGCTGGGTACACGGC.................................................. 22 0 2 4.50 9 8 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................GCTCAACACAACTGCTGGTCCC............................................................................................................................. 22 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................AGAACATGGCTGGGTACACGGCA................................................. 23 0 2 3.50 7 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................AGAACATGGCTGGGTACACG.................................................... 20 0 2 3.00 6 0 0 0 3 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................GCTCAACACAACTGCTGGTCCCCAAAGC....................................................................................................................... 28 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................GCTCAACACAACTGCTGGTCCCCAA.......................................................................................................................... 25 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................GCTCAACACAACTGCTGGTCCCCA........................................................................................................................... 24 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................CTCAACACAACTGCTGGTCC.............................................................................................................................. 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................GCTCAACACAACTGCTGGTCCCCAAAG........................................................................................................................ 27 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................AGAACATGGCTGGGTACAC..................................................... 19 0 2 2.00 4 1 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................AGAACATGGCTGGGTACACGGCAG................................................ 24 0 2 1.50 3 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................GCTCAACACAACTGCTGGTCC.............................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................AATGCCTGCGCAGAACATGGCTGGG.......................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................AACAGCAACAACGGCAATAATGC.............................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................TCAACACAACTGCTGGTCCCC............................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................AGCTCAACACAACTGCTGGTCCCC............................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................AACACAACTGCTGGTCCCCAT.......................................................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................CTAAACACAACTGCTGGTCCC............................................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................AGCTCGTACAAAAACAGCAACAACGGC...................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
CACTCCACTCGGCAAACGCCACTT............................................................................................................................................................. 24 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................GAACATGGCTGGGTACACGGC.................................................. 21 0 2 1.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................CTCAACACAACTGCTGGTCCCC............................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................CTCAACACAACTGCTGGTCCCCAAAG........................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................AGCTCGTACAAAAACAGCAACAACGG....................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................CTCGTACAAAAACAGCAACA........................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................GCTCAACACAACTGCTGGTCCCCAAA......................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
CACTCCACTCGGCAAAAGCCACTTT............................................................................................................................................................ 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CAGGAAGGGAATATGGCTCGTG............ 22 3 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................AGCTCAACACAACTGCTGGTCCC............................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................CCTGCGCAGAACATGGCTGG........................................................... 20 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................AGAACATGGCTGGGTACACGGCAGC............................................... 25 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................TGGGTACACGGCAGCTGCAAATGC...................................... 24 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................GCGTAGAACATGGCTTGGGA........................................................ 20 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................CTGGGTGCACGGCAGCTGCAAATGCCCC................................... 28 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................GGTACACGGCAGCTGCAAATGCC..................................... 23 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................CTGGGTACACGGCAGCTGCAAA......................................... 22 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................CTGGGTACACGGCAGCTGCAAAT........................................ 23 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................TTGCGGGACCAGCTCAACACA......................................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TGCGCAGAACATGGCTGGGTACACGGCA................................................. 28 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................AGAACATGGCTGGGTACACGGCAGA............................................... 25 1 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................TAAACACACCTGCTGGTACCC............................................................................................................................ 21 3 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................CGCAGAACATGGCTGGGTACACG.................................................... 23 0 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................AGAACATGGCTGGGAACACGGC.................................................. 22 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................CTGCGCAGAACATGGCTGG........................................................... 19 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................AGAACATGGCTGGGTACACGGCATTA.............................................. 26 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................TACACGGCAGCTGCAAATGCCC.................................... 22 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................CTGCGCAGAACATGGCTG............................................................ 18 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................AGAACATGGCTAGGTACACGG................................................... 21 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................AACATGGCTGGGTACACGGCAG................................................ 22 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................AGAACATGGCTGGGTACACGGCAGCT.............................................. 26 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................AGAACATGGCTGGGTACGCGG................................................... 21 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................GCGGGACCAGCTCAACACAAC....................................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................CGGGACCAGCTCAACACAACT...................................................................................................................................... 21 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................TGAACACACCTGCTGGTACCC............................................................................................................................ 21 3 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................TGCGGGACCAGCTCAACACAAC....................................................................................................................................... 22 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................TAAACACAGCTGCTGGTACCC............................................................................................................................ 21 3 6 0.33 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................AGGCTGGGAATATGGCTCC.............. 19 0 9 0.22 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................GCTCAACACAACTGCTGG................................................................................................................................. 18 0 10 0.20 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................AGGCTGGGAATATGGATGCAG............ 21 3 6 0.17 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................TGAACACACCTGCTGGTACC............................................................................................................................. 20 3 7 0.14 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................TGCAAATACCCCACAGGCTGGGA........................ 23 1 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................GCTGCAAATACCCCACAGGCTGGGAATA..................... 28 1 8 0.13 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................TGCCCCACAGGCTGGGAATATGGCTC............... 26 0 8 0.13 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................GCAGCTGCAAATGCCCCACAGG.............................. 22 0 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.ATTCCACTCGGCAAAAGT.................................................................................................................................................................. 18 2 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................................................TGCCCCACAGGCTGGGAATATGATTA............... 26 3 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................GCCCCACAGGCTGGGAATATGG.................. 22 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................CTGGGAATATGGCTCCTCCTCTCC...... 24 1 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................TGCCCCACAGGCTGGGAATATG................... 22 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................CAGCTCAACACAACTGCTGT................................................................................................................................. 20 1 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..................................GCTCAACACAACTGCTGGAC............................................................................................................................... 20 1 10 0.10 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................CAGCTCAACACAACTGCTG.................................................................................................................................. 19 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................AAGCGCCAGAAGCTCGTC......................................................................................................... 18 1 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.................................AGCTCAACACAACTGCTGG................................................................................................................................. 19 0 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
................................CAGCTCAACACAACTGCTGG................................................................................................................................. 20 0 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...........................GGGACCAGCTCAACACAACTG..................................................................................................................................... 21 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................GCTCAACACAACTTCTGG................................................................................................................................. 18 1 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................AGAACATGGCTGGGTACATG.................................................... 20 1 11 0.09 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................ACAGGCTGGGAATATGGCTTC.............. 21 1 11 0.09 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................TGAACACAGCTGCTGGTC............................................................................................................................... 18 2 14 0.07 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................TCAACACAACTGTTGGTATC............................................................................................................................. 20 3 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
....................................TGAACACAGCTCCTGGTCC.............................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CAGGCGGGGAGTATGGC................. 17 2 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................AAAGCACCAGAAGCTGGTTC........................................................................................................ 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

GTGAGGTGAGCCGTTTTCGGTGAAACGCCCTGGTCGAGTTGTGTTGACGACCAGGGGTTTCGCGGTCTTCGAGCATGTTTTTGTCGTTGTTGCCGTTATTACGGACGCGTCTTGTACCGACCCATGTGCCGTCGACGTTTACGGGGTGTCCGACCCTTATACCGAGGACGAGAGGACGTAA
************************************...................(((....((((.....(((((((.(((.......))).)))...))))))))....)))..***************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060678
9x140_testes_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060688
160_ovaries_total
 SRR060676
9xArg_ovaries_total
 SRR060654
160x9_ovaries_total
 GSM1528803
follicle cells		 SRR060682
9x140_0-2h_embryos_total
 SRR060674
9x140_ovaries_total
 SRR060673
9_ovaries_total
 SRR060687
9_0-2h_embryos_total
 SRR060675
140x9_ovaries_total
 SRR060655
9x160_testes_total
 SRR060683
160_testes_total
 M061
embryo
 SRR060662
9x160_0-2h_embryos_total
 SRR060656
9x160_ovaries_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060670
9_testes_total
 SRR060658
140_ovaries_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060680
 9xArg_testes_total
 SRR1106715
embryo_4-6h
 V047
embryo
 V053
head
 SRR060677
Argx9_ovaries_total
 SRR060689
160x9_testes_total
 SRR060672
9x160_females_carcasses_total
 SRR060664
9_males_carcasses_total
 SRR060686
Argx9_0-2h_embryos_total
 M027
male body		 M028
head
........................................................................................................................................................ACCCTTATACCGAGGACGAGAGGAC.... 25 0 1 12.00 12 7 0 0 0 1 0 0 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................CCCTTATACCGAGGACGAGAGGAC.... 24 0 2 11.00 22 6 3 0 1 4 1 0 0 2 0 0 0 1 0 1 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................CGACCCTTATACCGAGGACGAGAGGAC.... 27 0 1 10.00 10 2 0 4 0 1 0 0 0 1 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................GTGAAACGCCCTGGTCGAGTTGTGT......................................................................................................................................... 25 0 2 8.00 16 11 1 1 0 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................CCGACCCTTATACCGAGGACGAGAGGAC.... 28 0 1 7.00 7 2 0 0 0 1 0 0 0 1 0 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................CTTATACCGAGGACGAGAGGAC.... 22 0 2 6.00 12 3 3 0 2 0 3 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................CCGACCCTTATACCGAGGACGAGAGG...... 26 0 1 5.00 5 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................CCTTATACCGAGGACGAGAGGAC.... 23 0 2 4.50 9 2 1 1 2 1 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................GACCCTTATACCGAGGACGAGAGGAC.... 26 0 1 4.00 4 1 1 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................GGTGAAACGCCCTGGTCGAGTTGTGT......................................................................................................................................... 26 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....GGTGAGCCGGTTTGGGTG............................................................................................................................................................... 18 2 6 2.83 17 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0
..................................................................................................................................................TGTCCGACCCTTATACCGAGGACGAG......... 26 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................CGGTGAAACGCCCTGGTCGAGTTGT........................................................................................................................................... 25 0 1 2.00 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................CGCGGTCTTCGAGCATGTTTTTGT................................................................................................. 24 0 1 2.00 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................TTATACCGAGGACGAGAGGAC.... 21 0 2 1.50 3 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................CCCTTATACCGAGGACGAGAGGA..... 23 0 2 1.50 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................CGTCTTGTACCGACCCATGTGCCG.................................................. 24 0 2 1.50 3 0 0 0 0 0 1 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................GAAACGCCCTGGTCGAGTTGTGTTG....................................................................................................................................... 25 0 2 1.50 3 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................GTTTCGCGGTCTTCGAGCATGT....................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................TGACCCTTATACCGAGGACGAGAGGAC.... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............TTCGGTGAAACGCCCTGGTCGAGTTGT........................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................GTTATTACGGACGCGTCTTGTACCG.............................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................CGGTGAAACGCCCTGGTCGAGTTTTGT......................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TGTCAGACCCTTATACCGAGGACGAG......... 26 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................GGGGTTTCGCGGTCTTCGAGCATGT....................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................GGGTTTCGCGGTCTTCGAGCATGT....................................................................................................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................CGCGGTCTTCGAGCATGTTTTTGTCGTT............................................................................................. 28 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................GGTCTTCGAGCATGTTTTTGTCGT.............................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................GTGAAACGCCCTGGTCGAGTTGTGTTG....................................................................................................................................... 27 0 2 1.00 2 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................TCCGACCCTTATACCGAGGACGAG......... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................GGTCTTCGAGCATGTTTTTGTCGTT............................................................................................. 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................CGTTATTACGGACGCGTCTTGTACCG.............................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................TCGGTGAAACGCCCTGGTCGAGTTGT........................................................................................................................................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................CCGACCCTTATACCGAGGACGAGAGGACC... 29 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................CGTTATTACGGACGCGTCTTGTACC............................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................TCGCGGTCTTCGAGCATGTTTTTGT................................................................................................. 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................GGGTGTCCGACCCTTATACCGAGGAC............ 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................CCGACCCTTATACCGAGTACGAGAGGAC.... 28 1 2 1.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................CGGTGAAACGCCCTGGTCGAGTTGTGT......................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................GGTTTCGCGGTCTTCGAGCATGT....................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................GGGGTTTCGCGGTCTTCGAGCATGTTT..................................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................ACGCCCTGGTCGAGTTGTGT......................................................................................................................................... 20 0 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................CCGACCCTTATACCGAAGACGAGAGGA..... 27 1 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................GCCCCATGTGCCGTCGACGT........................................... 20 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................CCTTATCCCGAGGACGAGAGGAC.... 23 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................GTGAAACGCCCTGGTCGAGTTGTG.......................................................................................................................................... 24 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................AAACGCCCTGGTCGAGTTGTGT......................................................................................................................................... 22 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................GTGAAACGCCCTGGTCGAGTTGT........................................................................................................................................... 23 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................CCCTTATACCGAGGACGTGAGGAC.... 24 1 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................GACGCGTCTTGTACCGACCCATGTGC.................................................... 26 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................GTCTTGTACCGACCCATGTGCCG.................................................. 23 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................GCCGTCGACGTTTACGGGGTG................................. 21 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................................CGACCCTTATACCGAGTACGAGAGGAC.... 27 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................CCCCTTACCGAGGACGAGAGGAC.... 23 3 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................ACGCGTCTTGTACCGACCCATGTGCC................................................... 26 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TGTGCCGTCGACGTTTACGGGGTGT................................ 25 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................CGACCCTTATACCGAAGACGACAGGAC.... 27 2 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................ACGGACGCGTCTTGTACCG.............................................................. 19 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................CCATGTGCCGTCGACGTTTACGGGGT.................................. 26 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................CGCGTCTTGTACCGACCCATGTGCCG.................................................. 26 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................CATGTGCCGTCGACGTTTACGGGGTGT................................ 27 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................CCGACCCTTATACCGAAGACGAGAGGAC.... 28 1 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................AAACGCCCTGGTCGAGTTGTGTTG....................................................................................................................................... 24 0 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................CCCTTCTCCCGAGGACGAGAGGAC.... 24 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................CCTTATACCGAGGACGAGAGGAA.... 23 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................GAAACGCCCTGGTCGAGTTGTGT......................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................CCCTTATACCGAGGACGAGGGGAC.... 24 1 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................CTGAAACGCCCTGGTCGAGTTGTGT......................................................................................................................................... 25 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................GTTAAACGCCCTGGTCGAGTTGTGT......................................................................................................................................... 25 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................TGAAACGCCCTGGTCGAGTTGTGT......................................................................................................................................... 24 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................AACGCCCTGGTCGAATTGTGTTG....................................................................................................................................... 23 1 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................CCTCATACCGAGGACGAGAGGAC.... 23 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................CGCCCTGGTCGAGTTGTGTTG....................................................................................................................................... 21 0 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................GCCCTGGTCGAGTTGTGTTGACG.................................................................................................................................... 23 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................CGCCCTGGTCGAGTTGTGT......................................................................................................................................... 19 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................ACGCCCTGGTCGAGTTGT........................................................................................................................................... 18 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................CATTATACCGAGTACGAGAGGAC.... 23 2 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................CCCTTATACCGAGTACGAGAGGAC.... 24 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................TGATACGCCCTGGTCGAGTTGTGT......................................................................................................................................... 24 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................CCTTATACCGAAGACGACAGGAC.... 23 2 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................CCCTGGTCGAGTTGTGTTGACG.................................................................................................................................... 22 0 10 0.30 3 0 0 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................CCTGGTCGAGTTGTGTTG....................................................................................................................................... 18 0 10 0.30 3 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................CGTTTACGGGGTGTCCGACCCTTAT..................... 25 0 8 0.25 2 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................ACCAAGCGTTTCTCGGTCTTC............................................................................................................... 21 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.................................................................................................................................CGTCGACGTTTACGGGGTGTCCG............................. 23 0 8 0.25 2 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................CGTCGACGTTTACGGGGTGT................................ 20 0 8 0.25 2 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................CCGACCCTTATACCGAGGA............. 19 0 9 0.22 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................TCGACGTTTACGGGGTGT................................ 18 0 9 0.22 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................GGTCGAGTTGTGTTGACGACC................................................................................................................................. 21 0 10 0.20 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................TCGACGTTTACGGGGTCT................................ 18 1 10 0.20 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................GTTGTTCCCGTTATCACGGTC........................................................................... 21 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................CTCGACGTTTATGGGGTGTCCGACCCT........................ 27 2 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
....................................................................................................................................CGACGTTTACGGGGTGTCCGACCCT........................ 25 0 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................CCGTCGACGTTTATGGGGTGT................................ 21 1 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................ACGTTTACGGGGTGTCCGACCCT........................ 23 0 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................TCGACGTTTATGGGGTGTCCGACCCT........................ 26 1 8 0.13 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................TGTCGACGTTTACGGGGTGT................................ 20 1 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................GTCCGACCCTTATACCGAGGA............. 21 0 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..................................................................................................................................GTCGACGTTTATGGGGTGT................................ 19 1 9 0.11 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................GGACGCGTATTGTGCCGACCCAT........................................................ 23 2 9 0.11 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................ATGGGGTGTCCGACCCTTATACCG................. 24 1 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..................................................................................................................................GTCGACGTTTACGGGGTGT................................ 19 0 9 0.11 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................CGACCCTTATACCGAGGA............. 18 0 9 0.11 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................TCGACGTTTATGGGGTGT................................ 18 1 9 0.11 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................GGGGTGTCCGACCCTTATACCGA................ 23 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................CCGACCCTTATACCGAGGAAGAGAGGAC.... 28 1 9 0.11 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................ACGGGGTGTCCGACCCTTATACCG................. 24 0 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................TGACGTTTACGGGGTGTCCGAC........................... 22 1 9 0.11 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................GTCGACGTTTACGGGGTGTCCG............................. 22 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................CGACGTTTACGGGGTGTCCGACCC......................... 24 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................GTCGACGTTTACGGGGTGTCCGAC........................... 24 0 9 0.11 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................ACGTTTACGGGGTGTCCGACC.......................... 21 0 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................ACCCTTATACCGAGGAAGAGAGGAC.... 25 1 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................ATCCTGGTCGAGTTGTGTTGACGAC.................................................................................................................................. 25 2 10 0.10 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................CGAGTTGTGTTGACGACC................................................................................................................................. 18 0 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................CCCTGGTCGAGTTGTGTTGAC..................................................................................................................................... 21 0 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..............................TGGTCGAGTTGTGTTGACGACC................................................................................................................................. 22 0 10 0.10 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................CCGACCCTTATACCGAAGAGGAGAGGA..... 27 2 10 0.10 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................GTCGAGTTGTGTTGACGACC................................................................................................................................. 20 0 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................CCCTTATACCGAGGAGGAGAGGAC.... 24 1 10 0.10 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................ACTGGTCGAGTTGTGTTG....................................................................................................................................... 18 1 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................CCCTGGTCGAGTTGTGTTGA...................................................................................................................................... 20 0 10 0.10 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................CTTATACCGAAGAAGAGAGGAC.... 22 2 11 0.09 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................GTCGACGTCTACGGGGTGT................................ 19 1 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................TCTGGTCGAGTTGTGTTGA...................................................................................................................................... 19 1 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
................................ATCGAGTTGTGTTCACGAC.................................................................................................................................. 19 2 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................TCTTTTTGTCCTGGTTGCCGT..................................................................................... 21 3 15 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.....................................................................................................................................................CGGACCCTTATACCG................. 15 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12734:487821-488001 + dvi_458 CACTCCACTCG-----GCA---AA-AGC------------C-------------------------------------------------ACT--TTGCGGGACCA-GCTCAACACAACTGCTGGTCCCCAAAGCGCCAG-----------------AAGCTCGTACAAAAACAG---------C---------------------------------------------AACAACGGCAATAATGCCTGCGCAGAACATGGCTGGGTACACG---GCAGCT-----------------------------------GCAAATGCCCCACAGG---------------------------------------CTGGGAATATGGCTCCTGCTCTCCTGCATT
droMoj3 scaffold_6500:10067166-10067296 + CACTGAACTATCAGC---A---AC-AGC------------------------------------------------------------A-AC----------------------------------AGCCACAGCAGCAA-----------------TTGCTGCAGCAACCAC---------------------------------------------------------AG------CAACA------------------------GCAGCA---GCAGCA-----------------------------------GCAATATCCATTGACACCACAGCTGGGATTACCCCTGCCGCAAATCTTTAACAATCT------G---------------------
droGri2 scaffold_14853:7583691-7583812 + TCATCAC--------AGCA----------G--------------------------------------------------------CCG-ACAC----------AC-GC-----------------ACTCACAGCATCAA-----------------CAGCATCAACAACAACAG---------C---------------------------------------------AGCATCAGCAGCA------------------------------------GCAACAACAACAACTGCAGCCGGGCGCAAGGCGGCACAATTACAGCT----------------------------CCACA---------------------G---------------------
droWil2 scf2_1100000004902:5909407-5909484 + TCAACGC------------------------------------------------------------------------------------CAC----------CG-CTGCC-----------------------GCCAACAGCAA-----------------CAACAGCAGCAT---------C---------------------------------------------AGCAACAGCAACA------------------------------------ACAACA---AT---GCCA--------------------T------------------CGC-------------CATGGCC---------------------G---------------------
dp5 XR_group8:1471898-1471990 + TGCCATC--------GGCC-----A-------------------------------------------------------------GCG-GCAC----------CG-GGTCGGCA-----------------------TCCAGTAACTC--------------CTG---CAACAG---------C---------------------------AATTCGAACAACAACAACAA---------------------------------------------------T---AAC---GGCA--------------------G------------------CGGA---G-------GAGGCGCA---------------------G---------------------
droPer2 scaffold_32:3582-3674 - TGCCATC--------GGCC-----A-------------------------------------------------------------GCG-GCAC----------CG-GGTCGGCA-----------------------TCCAGTAACTC--------------CTG---CAACAG---------C---------------------------AATTCGAACAACAACAACAA---------------------------------------------------T---AAC---GGCA--------------------G------------------CGGA---G-------GAGGCGCA---------------------G---------------------
droAna3 scaffold_13337:15776302-15776376 + CCATTAG----------------------------------------------------------------------------------------------------------------------TACCCCCAATGCCAA-----------------TGGCACCTCCAACGGCAA---------C---------------------------------------------AACAACAACAACA------------------------------------GCAGCA---GC---ACGG--------------------GCCATAACT----------------------------------------------------------------------------
droBip1 scf7180000395714:85677-85808 + CACTTGAGGCA---------------------------------------------------------------------------CCA-ACAT----------CA-GC--------------------TACAGCAGCAG-----------------CAGCAGCA---GCAACTGCAACAGCAGCAACAGCAGCAACAAT------------------------------------TGCAACAACACTTGCAACAAACATTGCCAACGCCACG---TTGCGT-----------------------------------G----CA-------------ACA---G-------CAGCAGCA---------------------A---------------------
droKik1 scf7180000302475:1339467-1339528 + CCAACAG----------------------------------------------------------------------------------------------------------------------------------------CAGCAG--------------CAG---CAGCAG---------C---------------------------------------------------------A------------------------------------GTAATAGCAACAACTGCAGCAGCGCCT-----------G------------------TGCT---G-------GA----AA---------------------T---------------------
droFic1 scf7180000453438:39986-40106 - TCAACAG----------------C-AGCAACAATTACAAGAAA------------------------------------------------AGCTTGGAC-----AA---------------------CTGCAACAGCAG-----------------AAGCAGCA---ACAAGTGCAACCACAGCAACAACAACAACAAT---------------------------------------------------------------------------------------------TCCA--------------------A---------------CCGCAGCTGAGACAACTGCAACAGCA---------------------A---------------------
droEle1 scf7180000491261:1513456-1513630 + CCCACAACAA-----------------TTGCAGCAACAGCCACCCAATGGAAGCATCGTCAATATGTTGCCACAAAAAGTGAATATGCT-GCCG----------AT-TGTCC-----------------------ACCAGCAGCAG-----------------CAGCAACAGCAG---------C---------------------------AACTCCAACAACCACAGCA---------------------------------------------GCAG---------C---AGCA--------------------GCCATTGCTCAGCAAA---------------------------------------AGCGGACCACCACCTTTGATCTTC------
droRho1 scf7180000760202:72916-73011 + TGTTGTAA--------ACC---------AG---------------------------------------------------------CAGATACTTAGCG--------------------------ATCCGCAGCGCTTG-----------------CAGTACCTACAACAACAG---------C---------------------------AGATGATGCAAAAACAACAA------CAGCA---------------------------------GCAA---CA---AC---A-----------------------G------CT----------------------------------------------------------------------------
droBia1 scf7180000302402:4589889-4589993 + CGAAAGC------------------A----------------------------------------------------------------GCG--CTGCACGGCCA-TGTCCGCATACACGCTTATGGCCGCAGTGCCAG-----------------CAGCAACACCAACAACAG---------C---------------------------------------------AGCAACACCGGCA------------------------------------GCGGCA---AC---A-----------------------T------GC--------------------------------A-----------ACAT------G---------------------
droTak1 scf7180000415210:161510-161562 + CCAAGAG-------------------------------------------------------------------------------------------------------------------------------TGCCAG-----------------AAGCAACATCAACAGCAG---------C---------------------------------------------AGCAACAGCAGCA------------------------------------ACAACA---GC----------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409804:2438552-2438605 + AGCAAC------------------------------------------------------------------------------------------------------------------------------------AG-----------------------CA---GCAACTGCAACAACAGCAACAACAACAACAAT---------------------------------------------------------------------------------------------CGCC--------------------G---------------CCGCAG-----------------------------------------A---------------------
dm3 chr3L:8382945-8383030 + TGCGATGGC----------------A----------------------------------------------------------------G------------------------------------------------------------------------CGTGAAGGGCGG---------C---------------------------------------------AAC------------GCCTGTCCGGAACACACCTTCCGCTGCG---GCAGCG-----------------------------------GCGAGTGCCTGCCGGA---------------------------------------GTACGAGTA---------------------
droSim2 x:17666675-17666749 + CGCCGGGAGCG-----------------------------------------------------------------------------------------------------------------------------CGAG-----------------AAAAAGCAGCAACAACTGCAGAGCCAGCAGCAGG-------------------------------------------------GCAAGATCTGCGCCTAACTT----------------------------------------------------------------------------------------------GGGTG---------------------G---------------------
droSec2 scaffold_16:543553-543619 + CAACAGC------------------A----------------------------------------------------------------G------------------------------------------------------------------------CAACAGCAGCAG---------C---------------------------------------------AGC------------AGCAACACCAGGCACCGCAGCAACCGCAGCAGCTG--------------------------------------CAGCTGC-----------------------------------------------------------------------------
droYak3 3R:4894624-4894705 + CGCTCGACTCGAAGT---GG--AAA-------------------------------------------------------------ACA-ACACCC---------A-GTCCGGTG-----------------------CTCTACAATGC--------------CAACAACAACAG---------C---------------------------------------------AGC---------A------------------------------------ACAACAACAAT--------------------------------GACT------------------------------------------------------G---------------------
droEre2 scaffold_4784:18381300-18381448 - CAGCCTACCCGCCGT---CGAGAC-AACCGCAACTACAGCCAC------------------------------------------------CACTCAGTC-----TT---------------------CCTTTGCCGCCG------G--AGCGACGGGGGATCTCCCGCTGACCA--------CGATGAGCCGCAATAATTCCAACTCTAGCATGATGAGCTACCACTGCA---------------------------------------------GCTG---------C---AATA--------------------G------CC----------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
CACTCCACTCG-----GCA---AA-AGC------------C-------------------------------------------------ACT--TTGCGGGACCA-GCTCAACACAACTGCTGGTCCCCAAAGCGCCAG-----------------AAGCTCGTACAAAAACAG---------C---------------------------------------------AACAACGGCAATAATGCCTGCGCAGAACATGGCTGGGTACACG---GCAGCT-----------------------------------GCAAATGCCCCACAGG---------------------------------------CTGGGAATATGGCTCCTGCTCTCCTGCATTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................................................................................................................................................................AGAACATGGCTGGGTACACG---G.............................................................................................................................21214.50293012000000000200000000003213001000002000000000000000000000000000
...........................................................................................................GCTCAACACAACTGCTGGTCCCC................................................................................................................................................................................................................................................................................2315.005005000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................AGAACATGGCTGGGTACACG---GC............................................................................................................................2224.509008000000000000000000000001000000000000000000000000000000000000
...........................................................................................................GCTCAACACAACTGCTGGTCCC.................................................................................................................................................................................................................................................................................2214.004004000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................AGAACATGGCTGGGTACACG---GCA...........................................................................................................................2323.507006000000000000000000000100000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................AGAACATGGCTGGGTACACG---..............................................................................................................................2023.006100000000000100000000001003000000000000000000000000000000000000
...........................................................................................................GCTCAACACAACTGCTGGTCCCCAAAGC...........................................................................................................................................................................................................................................................................2813.003003000000000000000000000000000000000000000000000000000000000000
...........................................................................................................GCTCAACACAACTGCTGGTCCCCAA..............................................................................................................................................................................................................................................................................2513.003003000000000000000000000000000000000000000000000000000000000000
...........................................................................................................GCTCAACACAACTGCTGGTCCCCA...............................................................................................................................................................................................................................................................................2413.003003000000000000000000000000000000000000000000000000000000000000
............................................................................................................CTCAACACAACTGCTGGTCC..................................................................................................................................................................................................................................................................................2012.002002000000000000000000000000000000000000000000000000000000000000
...........................................................................................................GCTCAACACAACTGCTGGTCCCCAAAG............................................................................................................................................................................................................................................................................2712.002002000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................AGAACATGGCTGGGTACAC..................................................................................................................................1922.004001000000000100000000000200000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................AGAACATGGCTGGGTACACG---GCAG..........................................................................................................................2421.503002000000000000000000000100000000000000000000000000000000000000
...........................................................................................................GCTCAACACAACTGCTGGTCC..................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................AATGCCTGCGCAGAACATGGCTGGG.......................................................................................................................................2511.001000000000000000000000000010000000000000000000000000000000000000
..........................................................................................................................................................................AACAG---------C---------------------------------------------AACAACGGCAATAATGC...........................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................TCAACACAACTGCTGGTCCCC................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................A-GCTCAACACAACTGCTGGTCCCC................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................AACACAACTGCTGGTCCCCAT..............................................................................................................................................................................................................................................................................2111.001000000000000000000000000010000000000000000000000000000000000000
..............................................................................................................................................................AGCTCGTACAAAAACAG---------C---------------------------------------------AACAACGGC...................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................GAACATGGCTGGGTACACG---GC............................................................................................................................2121.002002000000000000000000000000000000000000000000000000000000000000
............................................................................................................CTCAACACAACTGCTGGTCCCC................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................CTCAACACAACTGCTGGTCCCCAAAG............................................................................................................................................................................................................................................................................2611.001000000000000000000000000100000000000000000000000000000000000000
..............................................................................................................................................................AGCTCGTACAAAAACAG---------C---------------------------------------------AACAACGG....................................................................................................................................................................2611.001000000000000000000000000010000000000000000000000000000000000000
................................................................................................................................................................CTCGTACAAAAACAG---------C---------------------------------------------AACA........................................................................................................................................................................2011.001000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................GCTCAACACAACTGCTGGTCCCCAAA.............................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
CACTCCACTCG-----GCA---AA-AGC------------C-------------------------------------------------ACT--TT.................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000100000000000000000000000000000000000000
.........................................................................................................A-GCTCAACACAACTGCTGGTCCC.................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................CCTGCGCAGAACATGGCTGG........................................................................................................................................2020.501000000000000000000000000010000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................AGAACATGGCTGGGTACACG---GCAGC.........................................................................................................................2520.501001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................TGGGTACACG---GCAGCT-----------------------------------GCAAATGC.............................................................................2420.501001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................GGTACACG---GCAGCT-----------------------------------GCAAATGCC............................................................................2320.501000000000000010000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................CTGGGTACACG---GCAGCT-----------------------------------GCAAA................................................................................2220.501001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................CTGGGTACACG---GCAGCT-----------------------------------GCAAAT...............................................................................2320.501000000000000000000000000010000000000000000000000000000000000000
...............................................................................................TTGCGGGACCA-GCTCAACACA.............................................................................................................................................................................................................................................................................................2120.501001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................TGCGCAGAACATGGCTGGGTACACG---GCA...........................................................................................................................2820.501000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................................AGAACATGGCTGGGTACACG---GCAGA.........................................................................................................................2520.501000000000000000000000000001000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................CGCAGAACATGGCTGGGTACACG---..............................................................................................................................2320.501000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................................................................CTGCGCAGAACATGGCTGG........................................................................................................................................1920.501000000001000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................AGAACATGGCTGGGTACACG---GCATTA-----------------------------------.....................................................................................2620.501001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................TACACG---GCAGCT-----------------------------------GCAAATGCCC...........................................................................2220.501001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................CTGCGCAGAACATGGCTG.........................................................................................................................................1820.501000000000000000000000000000000000000001000000000000000000000000
...............................................................................................................................................................................................................................................................AACATGGCTGGGTACACG---GCAG..........................................................................................................................2220.501000000000000000000000000010000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................AGAACATGGCTGGGTACACG---GCAGCT-----------------------------------.....................................................................................2620.501001000000000000000000000000000000000000000000000000000000000000
.................................................................................................GCGGGACCA-GCTCAACACAAC...........................................................................................................................................................................................................................................................................................2130.331001000000000000000000000000000000000000000000000000000000000000
..................................................................................................CGGGACCA-GCTCAACACAACT..........................................................................................................................................................................................................................................................................................2130.331100000000000000000000000000000000000000000000000000000000000000
................................................................................................TGCGGGACCA-GCTCAACACAAC...........................................................................................................................................................................................................................................................................................2230.331100000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................AGG---------------------------------------CTGGGAATATGGCTCC..............1990.222002000000000000000000000000000000000000000000000000000000000000
...........................................................................................................GCTCAACACAACTGCTGG.....................................................................................................................................................................................................................................................................................18100.202000000000000000000000001000010000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................TGCCCCACAGG---------------------------------------CTGGGAATATGGCTC...............2680.131000000000000000000000000001000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................GCAGCT-----------------------------------GCAAATGCCCCACAGG---------------------------------------..............................2280.131001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................GCCCCACAGG---------------------------------------CTGGGAATATGG..................2290.111001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................TGCCCCACAGG---------------------------------------CTGGGAATATG...................2290.111001000000000000000000000000000000000000000000000000000000000000
........................................................................................................CA-GCTCAACACAACTGCTGT.....................................................................................................................................................................................................................................................................................20100.101000000000000000000000000000000000000000100000000000000000000000
........................................................................................................CA-GCTCAACACAACTGCTG......................................................................................................................................................................................................................................................................................19100.101001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................AAGCGCCAG-----------------AAGCTCGTC............................................................................................................................................................................................................................................18100.101000000000000000000000000000000000100000000000000000000000000000
.........................................................................................................A-GCTCAACACAACTGCTGG.....................................................................................................................................................................................................................................................................................19100.101000000000000000000000000000010000000000000000000000000000000000
........................................................................................................CA-GCTCAACACAACTGCTGG.....................................................................................................................................................................................................................................................................................20100.101000010000000000000000000000000000000000000000000000000000000000
...................................................................................................GGGACCA-GCTCAACACAACTG.........................................................................................................................................................................................................................................................................................21100.101001000000000000000000000000000000000000000000000000000000000000
droMoj3
CACTGAACTATCAGC---A---AC-AGC------------------------------------------------------------A-AC----------------------------------AGCCACAGCAGCAA-----------------TTGCTGCAGCAACCAC---------------------------------------------------------AG------CAACA------------------------GCAGCA---GCAGCA-----------------------------------GCAATATCCATTGACACCACAGCTGGGATTACCCCTGCCGCAAATCTTTAACAATCT------G---------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................................................................................................................................GCAGCAACCAC---------------------------------------------------------AG------CAACA------------------------GC.....................................................................................................................................2040.251000010
..........................................................................................................................................................................CAC---------------------------------------------------------AG------CAACA------------------------GCAGCA---GCAGC.........................................................................................................................21200.051001000
...........................................................................................................................................................................AC---------------------------------------------------------AG------CAACA------------------------GCAGCA---GCAGCA-----------------------------------.....................................................................................21200.051000010
.......................................................................................................................................................................................................................................G------CAACA------------------------GCAGCA---GCAGCA-----------------------------------GCA..................................................................................21200.051010000
..........................................................................................................................................................................CAC---------------------------------------------------------AG------CAACA------------------------GCAGCA---GCAGCA-----------------------------------.....................................................................................22200.051001000
droGri2
TCATCAC--------AGCA----------G--------------------------------------------------------CCG-ACAC----------AC-GC-----------------ACTCACAGCATCAA-----------------CAGCATCAACAACAACAG---------C---------------------------------------------AGCATCAGCAGCA------------------------------------GCAACAACAACAACTGCAGCCGGGCGCAAGGCGGCACAATTACAGCT----------------------------CCACA---------------------G---------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.......................................................................................................................................................................................................................................GCATCAGCAGCA------------------------------------GCAACAACA..................................................................................................................21110.09110
.......................................................................................................................................................................AACAACAG---------C---------------------------------------------AGCATCAGCAGCA------------------------------------...........................................................................................................................22200.05110
droWil2
TCAACGC------------------------------------------------------------------------------------CAC----------CG-CTGCC-----------------------GCCAACAGCAA-----------------CAACAGCAGCAT---------C---------------------------------------------AGCAACAGCAACA------------------------------------ACAACA---AT---GCCA--------------------T------------------CGC-------------CATGGCC---------------------G---------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................................................................................................................................AACAGCAA-----------------CAACAGCAGCAT---------C---------------------------------------------AGC.........................................................................................................................................................................2430.33100001
....................................................................................................................................................................AACAGCAGCAT---------C---------------------------------------------AGCAACAGC...................................................................................................................................................................2140.25100010
.............................................................................................................................................................................AT---------C---------------------------------------------AGCAACAGCAACA------------------------------------ACA........................................................................................................................19200.10201010
........................................................................................................................................................................................................................................CAACAGCAACA------------------------------------ACAACA---AT---.............................................................................................................19200.05100010
dp5
TGCCATC--------GGCC-----A-------------------------------------------------------------GCG-GCAC----------CG-GGTCGGCA-----------------------TCCAGTAACTC--------------CTG---CAACAG---------C---------------------------AATTCGAACAACAACAACAA---------------------------------------------------T---AAC---GGCA--------------------G------------------CGGA---G-------GAGGCGCA---------------------G---------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................................................................................................................................................................................................CAACAA---------------------------------------------------T---AAC---GGCA--------------------G------------------CGGA---G-------GA.................................................2212.0020200000000
..................................................................................................................A-----------------------TCCAGTAACTC--------------CTG---CAACAG---------C---------------------------AATT..........................................................................................................................................................................................2611.0010100000000
droPer2
TGCCATC--------GGCC-----A-------------------------------------------------------------GCG-GCAC----------CG-GGTCGGCA-----------------------TCCAGTAACTC--------------CTG---CAACAG---------C---------------------------AATTCGAACAACAACAACAA---------------------------------------------------T---AAC---GGCA--------------------G------------------CGGA---G-------GAGGCGCA---------------------G---------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............................................................................................................GTCGGCA-----------------------TCCAGTAACTC--------------CTG---CAACA....................................................................................................................................................................................................................................2612.002200000
droAna3
CCATTAG----------------------------------------------------------------------------------------------------------------------TACCCCCAATGCCAA-----------------TGGCACCTCCAACGGCAA---------C---------------------------------------------AACAACAACAACA------------------------------------GCAGCA---GC---ACGG--------------------GCCATAACT----------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....AG----------------------------------------------------------------------------------------------------------------------TACCCCCAATGCCAA-----------------TGGCACCTC............................................................................................................................................................................................................................................2611.001010000
..............................................................................................................................................................................................................................................CAACA------------------------------------GCAGCA---GC---ACGG--------------------GCC..................................................................................2011.001100000
.............................................................................................................................................................................AA---------C---------------------------------------------AACAACAACAACA------------------------------------GCAGCA---GC---ACG..........................................................................................................2711.001010000
.........................................................................................................................................CAA-----------------TGGCACCTCCAACGGCA....................................................................................................................................................................................................................................2020.501010000
.............................................................................................................................................................................AA---------C---------------------------------------------AACAACAACAACA------------------------------------GCAGCA---..................................................................................................................22200.102000002
...........................................................................................................................................................................GCAA---------C---------------------------------------------AACAACAACAACA------------------------------------GCAGC......................................................................................................................23110.091100000
..............................................................................................................................................................................A---------C---------------------------------------------AACAACAACAACA------------------------------------GCAGCA---GC---.............................................................................................................23200.051000001
.............................................................................................................................................................................AA---------C---------------------------------------------AACAACAACAACA------------------------------------GCAGC......................................................................................................................21200.051010000
.............................................................................................................................................................................AA---------C---------------------------------------------AACAACAACAACA------------------------------------GCAGCA---GC---.............................................................................................................24200.051010000
........................................................................................................................................................................................C---------------------------------------------AACAACAACAACA------------------------------------GCAGCA---GC---A............................................................................................................23200.051010000
droBip1
CACTTGAGGCA---------------------------------------------------------------------------CCA-ACAT----------CA-GC--------------------TACAGCAGCAG-----------------CAGCAGCA---GCAACTGCAACAGCAGCAACAGCAGCAACAAT------------------------------------TGCAACAACACTTGCAACAAACATTGCCAACGCCACG---TTGCGT-----------------------------------G----CA-------------ACA---G-------CAGCAGCA---------------------A---------------------SizeHit CountTotal NormTotal
No Reads
droKik1
CCAACAG----------------------------------------------------------------------------------------------------------------------------------------CAGCAG--------------CAG---CAGCAG---------C---------------------------------------------------------A------------------------------------GTAATAGCAACAACTGCAGCAGCGCCT-----------G------------------TGCT---G-------GA----AA---------------------T---------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TCAACAG----------------C-AGCAACAATTACAAGAAA------------------------------------------------AGCTTGGAC-----AA---------------------CTGCAACAGCAG-----------------AAGCAGCA---ACAAGTGCAACCACAGCAACAACAACAACAAT---------------------------------------------------------------------------------------------TCCA--------------------A---------------CCGCAGCTGAGACAACTGCAACAGCA---------------------A---------------------SizeHit CountTotal NormTotal
No Reads
droEle1
CCCACAACAA-----------------TTGCAGCAACAGCCACCCAATGGAAGCATCGTCAATATGTTGCCACAAAAAGTGAATATGCT-GCCG----------AT-TGTCC-----------------------ACCAGCAGCAG-----------------CAGCAACAGCAG---------C---------------------------AACTCCAACAACCACAGCA---------------------------------------------GCAG---------C---AGCA--------------------GCCATTGCTCAGCAAA---------------------------------------AGCGGACCACCACCTTTGATCTTC------SizeHit CountTotal NormTotal
No Reads
droRho1
TGTTGTAA--------ACC---------AG---------------------------------------------------------CAGATACTTAGCG--------------------------ATCCGCAGCGCTTG-----------------CAGTACCTACAACAACAG---------C---------------------------AGATGATGCAAAAACAACAA------CAGCA---------------------------------GCAA---CA---AC---A-----------------------G------CT----------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
CGAAAGC------------------A----------------------------------------------------------------GCG--CTGCACGGCCA-TGTCCGCATACACGCTTATGGCCGCAGTGCCAG-----------------CAGCAACACCAACAACAG---------C---------------------------------------------AGCAACACCGGCA------------------------------------GCGGCA---AC---A-----------------------T------GC--------------------------------A-----------ACAT------G---------------------SizeHit CountTotal NormTotal
No Reads
droTak1
CCAAGAG-------------------------------------------------------------------------------------------------------------------------------TGCCAG-----------------AAGCAACATCAACAGCAG---------C---------------------------------------------AGCAACAGCAGCA------------------------------------ACAACA---GC----------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
AGCAAC------------------------------------------------------------------------------------------------------------------------------------AG-----------------------CA---GCAACTGCAACAACAGCAACAACAACAACAAT---------------------------------------------------------------------------------------------CGCC--------------------G---------------CCGCAG-----------------------------------------A---------------------SizeHit CountTotal NormTotal
No Reads
dm3
TGCGATGGC----------------A----------------------------------------------------------------G------------------------------------------------------------------------CGTGAAGGGCGG---------C---------------------------------------------AAC------------GCCTGTCCGGAACACACCTTCCGCTGCG---GCAGCG-----------------------------------GCGAGTGCCTGCCGGA---------------------------------------GTACGAGTA---------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....TGGC----------------A----------------------------------------------------------------G------------------------------------------------------------------------CGTGAAGGGCGG---------C---------------------------------------------AAC------------GC...........................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................................................................................................................CTGTCCGGAACACACCTTCCGCT....................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CGCCGGGAGCG-----------------------------------------------------------------------------------------------------------------------------CGAG-----------------AAAAAGCAGCAACAACTGCAGAGCCAGCAGCAGG-------------------------------------------------GCAAGATCTGCGCCTAACTT----------------------------------------------------------------------------------------------GGGTG---------------------G---------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
CGCCGGGAGCG-----------------------------------------------------------------------------------------------------------------------------CGAG-----------------AAAAAGCAGCAA.........................................................................................................................................................................................................................................2711.00100000000000001000
droSec2
CAACAGC------------------A----------------------------------------------------------------G------------------------------------------------------------------------CAACAGCAGCAG---------C---------------------------------------------AGC------------AGCAACACCAGGCACCGCAGCAACCGCAGCAGCTG--------------------------------------CAGCTGC-----------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................A----------------------------------------------------------------G------------------------------------------------------------------------CAACAGCAGCAG---------C---------------------------------------------AGC------------A............................................................................................................................................................19200.1020020
....AGC------------------A----------------------------------------------------------------G------------------------------------------------------------------------CAACAGCAGCAG---------C---------------------------------------------AGC------------AGCAACA......................................................................................................................................................28200.0510010
.AACAGC------------------A----------------------------------------------------------------G------------------------------------------------------------------------CAACAGCAGCAG---------C---------------------------------------------............................................................................................................................................................................21200.0511000
.....GC------------------A----------------------------------------------------------------G------------------------------------------------------------------------CAACAGCAGCAG---------C---------------------------------------------AGC------------A............................................................................................................................................................21200.0510010
..........................................................................................................................................................................AGCAG---------C---------------------------------------------AGC------------AGCAACACCA...................................................................................................................................................19200.0510010
.AACAGC------------------A----------------------------------------------------------------G------------------------------------------------------------------------CAACAGCAGCAG---------C---------------------------------------------A...........................................................................................................................................................................22200.0510010
droYak3
CGCTCGACTCGAAGT---GG--AAA-------------------------------------------------------------ACA-ACACCC---------A-GTCCGGTG-----------------------CTCTACAATGC--------------CAACAACAACAG---------C---------------------------------------------AGC---------A------------------------------------ACAACAACAAT--------------------------------GACT------------------------------------------------------G---------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....CGACTCGAAGT---GG--AAA-------------------------------------------------------------ACA-ACACCC---------.........................................................................................................................................................................................................................................................................................................2511.00100100000000
.............................................................................................................................................TACAATGC--------------CAACAACAACAG---------C---------------------------------------------AGC---------A------------------------------------AC.........................................................................................................................2711.00101000000000
droEre2
CAGCCTACCCGCCGT---CGAGAC-AACCGCAACTACAGCCAC------------------------------------------------CACTCAGTC-----TT---------------------CCTTTGCCGCCG------G--AGCGACGGGGGATCTCCCGCTGACCA--------CGATGAGCCGCAATAATTCCAACTCTAGCATGATGAGCTACCACTGCA---------------------------------------------GCTG---------C---AATA--------------------G------CC----------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............................................................................................................................................................................................................CTAGCATGATGAGCTACCA................................................................................................................................................................................1911.0011000000
..................................................................................................TC-----TT---------------------CCTTTGCCGCCG------G--AGCGAC.......................................................................................................................................................................................................................................................2311.0011000000
.......................................................................................................................................................................................................TTCCAACTCTAGCATGATGAGCTAC..................................................................................................................................................................................2511.0011000000
................................................................................................................................................................................................................TAGCATGATGAGCTACCACTGCA---------------------------------------------GC............................................................................................................................2511.0011000000
.............................................................................................................................................................................................................CTCTAGCATGATGAGCTAC..................................................................................................................................................................................1911.0010100000
..................................TACAGCCAC------------------------------------------------CACTCAGTC-----TT---------------------CCTT..............................................................................................................................................................................................................................................................................2411.0011000000
....................................................................................................................................................................................................................ATGATGAGCTACCACTGCA---------------------------------------------GCT...........................................................................................................................2211.0010000010
....................AGAC-AACCGCAACTACAGC..........................................................................................................................................................................................................................................................................................................................................................................1911.0010100000
....CTACCCGCCGT---CGAGAC-AAC......................................................................................................................................................................................................................................................................................................................................................................................2011.0010001000

Generated: 05/15/2015 at 06:47 PM