ID:

dvi_4492

 Coordinate:

scaffold_12855:8378692-8378842 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-17.4 -17.3 -17.2

Flybase annnotation

exon [dvir_GLEANR_10062:1]; CDS [Dvir\GJ10114-cds]; intron [Dvir\GJ10114-in]

Repeatable elements

NameClassFamilyStrand
TART_DVLINEJockey-

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GCATCAACAGCAACAACAACAACAGTGCAACAACAGCAACAACCACAGCAACAACAACCAGCAACATCGCAACAACAGCCAATGTAAGTAAACGTGTCGAAAGCAAAAGTCAAAAAGTCATTAATAGATTTAATCTACTATAACTTATATTCCAATTGGTTCGATAAAAATCCAAGCCATCGATAGGCGCGATTAATCCTAAAAGTAACATATTTGTTATCTCTTACTGCTTAACAATACGTGCTATATAA
**************************************************...............(((((....(((.....))).........(((((((..(((........((((...((.(((((...))))).))..)))).........))).))))))).........(((.......))))))))........************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR1106729
mixed whole adult body
 M047
female body
 M061
embryo
 SRR060665
9_females_carcasses_total
 SRR060667
160_females_carcasses_total
 SRR060668
160x9_males_carcasses_total
 SRR1106730
embryo_16-30h
 SRR060670
9_testes_total
 SRR060671
9x160_males_carcasses_total
..............................................................................................................................................................GTTCGAGAACAATCTAAGCCAT....................................................................... 22 3 2 2.00 4 4 0 0 0 0 0 0 0 0
...............................................GCAACAACAACCAGCAACATC....................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0
.......................................................AACCAGCAACATCGCAACAACA.............................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0
...............ACAACAACAGTGCAACAACAGCAACAACCACAGCAACAACAACCAGC............................................................................................................................................................................................. 47 0 1 1.00 1 0 0 0 0 0 0 1 0 0
............................AACAACAGCAACAACCACAGCAACAAC.................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0
...................................................CAACAACCAGCAACATCGC..................................................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0
........................................AACCACAGCAACAACAACCAGCAACATC....................................................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0
............................................................GCAACATCGCAACAACAGCCAAT........................................................................................................................................................................ 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0
.................AACAACAGTGCAACAACAGCAACAACCA.............................................................................................................................................................................................................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..........................................CCACAGCAACAACAACCAGCAA........................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................TTCGATAACAATCTAAGCCATT...................................................................... 22 3 2 0.50 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................TTCGATACAACTCCAAGCCATT...................................................................... 22 3 2 0.50 1 1 0 0 0 0 0 0 0 0
.............................................CAGCAACAACAACCAGCAACA......................................................................................................................................................................................... 21 0 3 0.33 1 0 0 0 0 0 0 0 1 0
......................................................................................................................................................................................................................GGTTACCTCTGACTGCTTAA................. 20 3 5 0.20 1 0 0 0 0 0 0 0 0 1
...............................................................................................................................................................TTCGATAAAACTTCAAGCCATT...................................................................... 22 3 8 0.13 1 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

CGTAGTTGTCGTTGTTGTTGTTGTCACGTTGTTGTCGTTGTTGGTGTCGTTGTTGTTGGTCGTTGTAGCGTTGTTGTCGGTTACATTCATTTGCACAGCTTTCGTTTTCAGTTTTTCAGTAATTATCTAAATTAGATGATATTGAATATAAGGTTAACCAAGCTATTTTTAGGTTCGGTAGCTATCCGCGCTAATTAGGATTTTCATTGTATAAACAATAGAGAATGACGAATTGTTATGCACGATATATT
**************************************************...............(((((....(((.....))).........(((((((..(((........((((...((.(((((...))))).))..)))).........))).))))))).........(((.......))))))))........************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060666
160_males_carcasses_total
 SRR060681
Argx9_testes_total
 SRR060670
9_testes_total
 M047
female body
 SRR060679
140x9_testes_total
 SRR060684
140x9_0-2h_embryos_total
 V053
head
 SRR060682
9x140_0-2h_embryos_total
 SRR060672
9x160_females_carcasses_total
 SRR060689
160x9_testes_total
 SRR060665
9_females_carcasses_total
.............................................................................................................................................................................................GCTAATTAGGATTTTCATTGTA........................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
....................................................TTTATGGTCGTTGTAGCGTTGT................................................................................................................................................................................. 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..............................................................TTGTATCGTTGTGGTCGGT.......................................................................................................................................................................... 19 2 6 0.33 2 0 0 0 0 1 1 0 0 0 0 0
......................................................GTGGGTCGTTGTAGGGTTG.................................................................................................................................................................................. 19 2 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................................TATCGGCGCTGATTAGGA................................................... 18 2 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0
...........................................................TCGTGGTAGCATGGTTGTCG............................................................................................................................................................................ 20 3 6 0.17 1 0 0 1 0 0 0 0 0 0 0 0
......................................TGTCGGTGTCGTTGTTCTTGGTC.............................................................................................................................................................................................. 23 2 9 0.11 1 0 0 0 0 0 0 1 0 0 0 0
..........................................................................................................................................................................................CGCGCTAATAAAGATTTT............................................... 18 2 10 0.10 1 0 0 0 0 0 0 0 1 0 0 0
..............................................................TTGTATCGTTGTGGTCGGTTT........................................................................................................................................................................ 21 3 12 0.08 1 0 0 0 0 0 0 0 0 1 0 0
......................................................................TTGTAGTCGGTAACATTC................................................................................................................................................................... 18 2 12 0.08 1 0 0 0 0 0 0 0 0 0 1 0
...............................TTGTCTTAGTTGGTGTCGT......................................................................................................................................................................................................... 19 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................AAACAATAAAGAAACACGAATT................. 22 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12855:8378642-8378892 - dvi_4492 GCATC--------AACAGC---AACAACA-----------ACAACAG-------------TG------CAACAACAGC---AACA---ACCA---------------------C---A---------GCAACAACAACCAG--------------------------------------------------CAACATCGCAACAACAGCCAAT-G------------------------------------------------------------------------------------TAAGTAAACGT----------------------------------------------------------------------GTCGAAA----------------------------GCAAAAGTCAAAAAGTCATTAATAGATTTAATCTACTA--------------TAA---------CTTATAT---------------TCC------AATTGGTT---CGATAAAAA---------------------TCCAAGCCATCGATAGGCGCGATTAATCCTAA---AAGTAACATATTTGTTATCTC-----------------------------TTACTG-CTT-AA---C-AATACGTGCTATAT----AA
droMoj3 scaffold_6500:19406841-19407064 + GCTTC--------AATTAC---AACAAG-------------------------------CAACAA---CAACAACAAC---AA---CAACTA---------------------G---A---------GTAACGACAATGGA--------------------------------------------------CAGCA--GCAGTGGGTATTGTC-GCATTG------T--GGAAA------------------------------------------------------------------------------------------------------------CAAAACATG--------------------------------GAAA----------------------------AAAAGAA------GAAAGCGAATAA---------AAGAA-TAT--GTATATATCAATTGGAAGC-TTA--AGCATATGA----------------------------------------------------------------------TAGGCCTGAGATACCCCAT---------GATGTCTGCTTAGAC-----------------------------TTATTA-CTAGAA---T-TGTTTATGTTATGTG---TG
droGri2 scaffold_15074:3831826-3832037 - TCAAC--------CACAAC---AAT------CCAATA---CCATCCA------AT-----CC------GAGCAGCAAC------A---GCAACATCC---------------CCAACAACG------ACA---TCGAC--------------------------------AT-------------------CGCCATCGACGCAGCA-----------------------------------------------------------------------------AAAAATCCA---GCTCCAA-----------------------------------------------------------G--------TCGCGAGATCGCGAACACGAACGTTCCCGTGAC-CGTTATTGGGT------CTAGACAGCAACAGTCCAA---------CCA--------------TCA---------ATTGGAT---------------TCC------CATT----------------------------------------------------------------------------------------GTTCCAGCGATGAATCGAATCAA----------------------------------------------TCG
droWil2 scf2_1100000004909:5003278-5003429 + ACAAC--------AACGGC---AGCAACG-----------ACAACAA---------------------CTACAGAACC---AACA---ACGACAACA---------------ACAACAACC------ACA---ACAGC--------------------------------TGCAACA-A-CAACTACAACA----GCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAACGGTGAGTTGAATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATATTGATAGACACATTATCG---AATACC-AATTATATTACACTTGATT
dp5 XR_group6:8816055-8816177 - ACAAC--------AACACC---TACAACA-----------ACACCTAAAA---------CAA------CAACACCAAC------A---TCAACACCAACAACAGCACCAGCAGC---ACC------AAAA---ACAACACC-----------------------------AACAACA-G-C------AA----------------------------CAA------A--AGCAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------AC--------AACAGGAACACCAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA
droPer2 scaffold_0:42120-42260 - GCAGC--------AGCAGC---AACAACG-----------ATATCTG-------------GA------CAACAGCAACA---TT---------------------------------GATC------ATG---ACTAT------------------CTA--------AACAACAATA-T-T------AACA----ATCGCAACAGTAA--------------------------T-------------------------------------------------------CCG---ATGCTAG-----------------------------------------------------------G--------TCA---AGGTGCGAATGTATTTA--------------------------------------AGTCTTAGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATGTTAGATTT--AA
droAna3 scaffold_12911:4997738-4997904 + ACAAC--------AACAAC---ACCAACA-----------ACAACAAATGCTGGCTCTGATT------CAACAACAAA------C---GC---------------------------AAC---------------TTC--------------------------------AACAA-------------------------------------------------------------------------------------------------------------------------------CAATACAATACGCACCATCACAACGTTGGTGAAACTCTGGAAAACGCCGGAAATCACAACAATT-----------------------------------------------------------------CATTACCGGAAATAACC------------------------------------------------------ACAACCGT------G-CCG-----------------------------------------------------------------------------------------------------------------------------GATGTTCC------------------AA
droBip1 scf7180000396708:3307213-3307367 - GCACC--------AGCACC---AAT-------------CC-------------GTAGTATTT------CAACAGCAAC------A---ACAACAGCAG---------------C---A---------ACAACACCAGCAAG----------------------------CGACAATCAAT-----------CACCA-----------------------G------C-------------------------------------------------AGTGAGTAGAAAATAAATCT---TTAA-----------------------------------------------------------AATT-----------------------------------------------------------------CAA-------------------------------------------------------TTTTAAAGATATTTTAGTTTT------A-CCG-----------------------------------------------------------------------------------------------------------------------------TAAATTT-----TATCGTAAAT----GG
droKik1 scf7180000302344:1389972-1390131 + ACAGG--------AACAGC---AAAAGCT-----------ACAACAGCTA---TTTT---TC------CAACA---AC------A---ACAACAACAA---------------C---A---------ACAACACGTACGAG---------GCCTATATAGTTCGACAAGAGGCGGCTTA------------CA---------------------------AGCAAACAA-------------TTA----------TCAAGGTAAGAAGAAGTAAGAAGTTTTTCAACAATA-------------------------------------------------------------------------------------------------------------------------------------------------TA-----------------------------------------------AACTTGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTA
droFic1 scf7180000453778:39982-40181 + ACAAC--------AGCAGC---AACAGCG-----------GCAACTC---------------------CAGCAGCAGC---AACA---CC---------------------------AGC------GGCAGCAGCAACACG------------------------------G-------------------CGACATCGCAGCAACAGGTGCTCGCGCAA------C--GC----------------------------------------------------------------------------------------------------------GCTGAAAAGTCATC--------------------------------------------------------------------------------GAACGGTGAGTTTGGTCGAAA---------------------------CTTG--A---------------CCC------AGTTTGTG---CAGCAACAC---------------------TCTTAACCCTTC------ACCTTTAACCCTGAATG-T-GTGTGTTTTTGTTGTT-------------------------------------------------------------------TC
droEle1 scf7180000491044:198995-199221 + AA--T--------AGCAAC---AACAATAGC----CATCA-------------TTATGCCCA------CTACAACAACAACAA---TAAT---------------------------GGC------GGTAACAACAACACAAATTTCCAAGCCTATCAA--------------------------------CATCA---TTACAAAAGCAACTTCG----------------------------------------------------------------------------------GTAAGGA--------------------------------CCTGATAAGGAATAGAAAAAAAAACAGCATATGCTCCTAATAAGATATATAAAAATATTCTAAGAAATTATT----------------------TGC------------------------------------------------C--A---------------ACA------AATTGGAA---AGATAACAA---------------------TTAAAACATTTG-------------------------------------------------------------------------------------------------------------AT
droRho1 scf7180000777920:106690-106848 - ACTTC-TACGGACAGCAGC---AACAGCA-----------G---------------------------CAGCAACAAC---------------------------------------AGCAGCAAAGCTACCAG---------------------------------------------------------CAACA------------------------TGTAA-----------------GTGTAAC------------------------------------------TA---TAATAACGAAACAA----------------------------------------------------------------------TTTAAAT----------------------------A------CTAAAATAAAATTATTAAAATTAAA----------A-------------------------------------------TTATCTTTT------AAATGATATTTCAA----------------------------------------------------------------------------------TCGAGCGTGTTCG----------------------------------------------ATA
droBia1 scf7180000302402:4578044-4578255 + CA-AC--------TACAAC---AACAACA--------------ACCA------GTACAAGCA--------CCA---------ACA---ACAACATCA---------------ACAACAACC------AGA---ACCTC--------------------------------ATCGACG-G-C------GTCA----ATTGCGACGA-----------------------------TGGCTGCC------------------------------------------ATAAATACG-----GTAAGTACGCGA-------CACCGCC-----AACC---------CAAAAC---------------------------------TGAAAA----------------------------AGTAAAT------CAGAGCCAGCAG---------AAAAAACAATTATGGGTCCCGAAA-----------------------------------AA------AAGCGAAACCACAA----------------------------------------------------------------------------------TTGAGAGCAATCA----------------------------------------------ATC
droTak1 scf7180000415659:118086-118238 + GCA-C--------AACAAC---AACAATAATACATTGCCA-------------GTTGGGGCA------CAACAGCAACA---TCAGCAA------------------------C---AG---------CAGCAACAACGTG--------------------------------------------------CAACATTGCAACATCCGCCGTT-GCCCAA------T--AGCAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------TCAAACAGGCATCGGTGAAATTGATCGAAGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTCA---GATCCC------------------AA
droEug1 scf7180000409524:211433-211618 + CA-AC--------AGCAAC---C---G------------------------------AGCTAAAAAAGCAGCA---------GCAACAA------------------------C---AAA---------------------------------------------CAAACAACAACCAACC------AA--CAACA------------------------AACAA-----------------CTGAATTAATGTTTTAAAGTACAAAATAACCGGGAGTAAATCAACAACAAATAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-TTA--AACATATTAAAAACGATTTAATTTA------AAACGCAACATCAA----------------------------------------------------------------------------------TCTAAATTATTCT------------------------------------ACTAAAA----AT
dm3 chr3L:8433750-8433967 - ACATC--------AACAAC---C---------------------------------GAGCTA------CAAAAGCAGCA---ACAACAA------------------------C---AAA---------------------------------------------CAAACAACAACCAA------------CA---------------------------AACAA-----------------CTGAATTAATGTTTTAAAGTACAAAATAACCGGGAGTAAATCAACAACAAATAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-TTA--AACATATTAAAAACGATTTAATTTA------AAACGCAACATCAATCTAAATTATTTAACTAAACATAAAAACAAACACTGCTAGAATTTAAGTCCAA---AAACA---------------------------------------------------------------------------------AC
droSim2 x:11775082-11775214 - GCA-C--------AGCAAC---AACAACAACACATTGCCA-------------GTAGGGGCA------CAGCAGCAGCA---GCAGCAG------------------------C---AT---------CAACAACAACGTG--------------------------------------------------CAACATTGCAACATCCACCGCT-GCCCAA------C--AGCAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------TCAAGCAGGCATCGGTGAAATTAATC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_21:173675-173819 - ACAGCATACG---CACAGCAACAACAACAACACATTGCCA-------------GTAGGGGCA------CAGCAGCAGCAGCAG---CAG------------------------C---ATC------AACAACAACAGCGTG--------------------------------------------------CAACATTGCAACATCCACCGCT-GCCCAA------C--AGCAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------TCAAGCAGGCATCGGTGAAATTAATC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 X:6693301-6693454 - GCACC--------AACAAC---AACAACA---CATTGCCA-------------GTAGGGGCA------CAGCAGCAGCAGCTG---CAG------------------------C---AAC------AACCACAACAACGTG--------------------------------------------------CAACATTGCAACATCCACCGCT-GCCCAA------C--AGCAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------TCAAGCAGGCATCGGTGAAATTGATCGAAGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTCA---GATCCC------------------AA
droEre2 scaffold_4690:6817982-6818109 - GCAGA--------GACAAC---AACAACA-----------CCACCAC-------------CA------CCATAACAAC---AACA---ACAACAGCA---------------GCAGCAACT------ACA---ACAAC--------------------------------AACAACA-A-C------AACA----AGAGC------------------AG------C--AGCAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------C--AGCAAGCGTTAACGAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACT------TATTGGTATT--AA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
GCATC--------AACAGC---AACAACA-----------ACAACAG-------------TG------CAACAACAGC---AACA---ACCA---------------------C---A---------GCAACAACAACCAG--------------------------------------------------CAACATCGCAACAACAGCCAAT-G------------------------------------------------------------------------------------TAAGTAAACGT----------------------------------------------------------------------GTCGAAA----------------------------GCAAAAGTCAAAAAGTCATTAATAGATTTAATCTACTA--------------TAA---------CTTATAT---------------TCC------AATTGGTT---CGATAAAAA---------------------TCCAAGCCATCGATAGGCGCGATTAATCCTAA---AAGTAACATATTTGTTATCTC-----------------------------TTACTG-CTT-AA---C-AATACGTGCTATAT----AASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............................................................................................................................GCAACAACAACCAG--------------------------------------------------CAACATC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000100000000000000000000000000000000000000000000
.......................................................................................................................................AACCAG--------------------------------------------------CAACATCGCAACAACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000100000000000000000000000000000000000000000000000
..........................ACA-----------ACAACAG-------------TG------CAACAACAGC---AACA---ACCA---------------------C---A---------GCAACAACAACCAG--------------------------------------------------C..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................4711.001000000000000000000000000000000000000000000000000000000000010000
.....................................................................AACAACAGC---AACA---ACCA---------------------C---A---------GCAACAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................CAACAACCAG--------------------------------------------------CAACATCGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
....................................................................................A---ACCA---------------------C---A---------GCAACAACAACCAG--------------------------------------------------CAACATC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................G--------------------------------------------------CAACATCGCAACAACAGCCAAT-............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
............................A-----------ACAACAG-------------TG------CAACAACAGC---AACA---ACCA---------------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................CCA---------------------C---A---------GCAACAACAACCAG--------------------------------------------------CAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................C---A---------GCAACAACAACCAG--------------------------------------------------CAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.331000000000000000000001000000000000000000000000000000000000000000
droMoj3
GCTTC--------AATTAC---AACAAG-------------------------------CAACAA---CAACAACAAC---AA---CAACTA---------------------G---A---------GTAACGACAATGGA--------------------------------------------------CAGCA--GCAGTGGGTATTGTC-GCATTG------T--GGAAA------------------------------------------------------------------------------------------------------------CAAAACATG--------------------------------GAAA----------------------------AAAAGAA------GAAAGCGAATAA---------AAGAA-TAT--GTATATATCAATTGGAAGC-TTA--AGCATATGA----------------------------------------------------------------------TAGGCCTGAGATACCCCAT---------GATGTCTGCTTAGAC-----------------------------TTATTA-CTAGAA---T-TGTTTATGTTATGTG---TGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
TCAAC--------CACAAC---AAT------CCAATA---CCATCCA------AT-----CC------GAGCAGCAAC------A---GCAACATCC---------------CCAACAACG------ACA---TCGAC--------------------------------AT-------------------CGCCATCGACGCAGCA-----------------------------------------------------------------------------AAAAATCCA---GCTCCAA-----------------------------------------------------------G--------TCGCGAGATCGCGAACACGAACGTTCCCGTGAC-CGTTATTGGGT------CTAGACAGCAACAGTCCAA---------CCA--------------TCA---------ATTGGAT---------------TCC------CATT----------------------------------------------------------------------------------------GTTCCAGCGATGAATCGAATCAA----------------------------------------------TCGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGAT---------------TCC------CATT----------------------------------------------------------------------------------------GTTCCAGCG...............................................................2311.00101
............................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGTCCAA---------CCA--------------TCA---------ATTG...............................................................................................................................................................................................2311.00110
droWil2
ACAAC--------AACGGC---AGCAACG-----------ACAACAA---------------------CTACAGAACC---AACA---ACGACAACA---------------ACAACAACC------ACA---ACAGC--------------------------------TGCAACA-A-CAACTACAACA----GCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAACGGTGAGTTGAATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATATTGATAGACACATTATCG---AATACC-AATTATATTACACTTGATTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................................................................................CAACA---------------ACAACAACC------ACA---ACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05101000
dp5
ACAAC--------AACACC---TACAACA-----------ACACCTAAAA---------CAA------CAACACCAAC------A---TCAACACCAACAACAGCACCAGCAGC---ACC------AAAA---ACAACACC-----------------------------AACAACA-G-C------AA----------------------------CAA------A--AGCAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------AC--------AACAGGAACACCAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
GCAGC--------AGCAGC---AACAACG-----------ATATCTG-------------GA------CAACAGCAACA---TT---------------------------------GATC------ATG---ACTAT------------------CTA--------AACAACAATA-T-T------AACA----ATCGCAACAGTAA--------------------------T-------------------------------------------------------CCG---ATGCTAG-----------------------------------------------------------G--------TCA---AGGTGCGAATGTATTTA--------------------------------------AGTCTTAGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATGTTAGATTT--AASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................AACAACG-----------ATATCTG-------------GA------CAACAGCAACA---T...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.002200000
................AGC---AACAACG-----------ATATCTG-------------GA------CAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
............................G-----------ATATCTG-------------GA------CAACAGCAACA---TT---------------------------------GATC------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
droAna3
ACAAC--------AACAAC---ACCAACA-----------ACAACAAATGCTGGCTCTGATT------CAACAACAAA------C---GC---------------------------AAC---------------TTC--------------------------------AACAA-------------------------------------------------------------------------------------------------------------------------------CAATACAATACGCACCATCACAACGTTGGTGAAACTCTGGAAAACGCCGGAAATCACAACAATT-----------------------------------------------------------------CATTACCGGAAATAACC------------------------------------------------------ACAACCGT------G-CCG-----------------------------------------------------------------------------------------------------------------------------GATGTTCC------------------AASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........................CA-----------ACAACAAATGCTGGCTCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
..............................................AATGCTGGCTCTGATT------CAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.....................................................................................................................................................................................................................................................................................................................ATACGCACCATCACAACGTTGGC......................................................................................................................................................................................................................................................................................................................................................2311.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACCGT------G-CCG-----------------------------------------------------------------------------------------------------------------------------GATGTTCC------------------A.2111.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACC------------------------------------------------------ACAACCGT------G-CCG-----------------------------------------------------------------------------------------------------------------------------GATG........................2111.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACCGT------G-CCG-----------------------------------------------------------------------------------------------------------------------------GATGTTCC------------------AA2111.001000010
ACAAC--------AACAAC---ACCAACA-----------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051010000
droBip1
GCACC--------AGCACC---AAT-------------CC-------------GTAGTATTT------CAACAGCAAC------A---ACAACAGCAG---------------C---A---------ACAACACCAGCAAG----------------------------CGACAATCAAT-----------CACCA-----------------------G------C-------------------------------------------------AGTGAGTAGAAAATAAATCT---TTAA-----------------------------------------------------------AATT-----------------------------------------------------------------CAA-------------------------------------------------------TTTTAAAGATATTTTAGTTTT------A-CCG-----------------------------------------------------------------------------------------------------------------------------TAAATTT-----TATCGTAAAT----GGSizeHit CountTotal NormTotal
No Reads
droKik1
ACAGG--------AACAGC---AAAAGCT-----------ACAACAGCTA---TTTT---TC------CAACA---AC------A---ACAACAACAA---------------C---A---------ACAACACGTACGAG---------GCCTATATAGTTCGACAAGAGGCGGCTTA------------CA---------------------------AGCAAACAA-------------TTA----------TCAAGGTAAGAAGAAGTAAGAAGTTTTTCAACAATA-------------------------------------------------------------------------------------------------------------------------------------------------TA-----------------------------------------------AACTTGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTASizeHit CountTotal NormTotal
No Reads
droFic1
ACAAC--------AGCAGC---AACAGCG-----------GCAACTC---------------------CAGCAGCAGC---AACA---CC---------------------------AGC------GGCAGCAGCAACACG------------------------------G-------------------CGACATCGCAGCAACAGGTGCTCGCGCAA------C--GC----------------------------------------------------------------------------------------------------------GCTGAAAAGTCATC--------------------------------------------------------------------------------GAACGGTGAGTTTGGTCGAAA---------------------------CTTG--A---------------CCC------AGTTTGTG---CAGCAACAC---------------------TCTTAACCCTTC------ACCTTTAACCCTGAATG-T-GTGTGTTTTTGTTGTT-------------------------------------------------------------------TCSizeHit CountTotal NormTotal
No Reads
droEle1
AA--T--------AGCAAC---AACAATAGC----CATCA-------------TTATGCCCA------CTACAACAACAACAA---TAAT---------------------------GGC------GGTAACAACAACACAAATTTCCAAGCCTATCAA--------------------------------CATCA---TTACAAAAGCAACTTCG----------------------------------------------------------------------------------GTAAGGA--------------------------------CCTGATAAGGAATAGAAAAAAAAACAGCATATGCTCCTAATAAGATATATAAAAATATTCTAAGAAATTATT----------------------TGC------------------------------------------------C--A---------------ACA------AATTGGAA---AGATAACAA---------------------TTAAAACATTTG-------------------------------------------------------------------------------------------------------------ATSizeHit CountTotal NormTotal
No Reads
droRho1
ACTTC-TACGGACAGCAGC---AACAGCA-----------G---------------------------CAGCAACAAC---------------------------------------AGCAGCAAAGCTACCAG---------------------------------------------------------CAACA------------------------TGTAA-----------------GTGTAAC------------------------------------------TA---TAATAACGAAACAA----------------------------------------------------------------------TTTAAAT----------------------------A------CTAAAATAAAATTATTAAAATTAAA----------A-------------------------------------------TTATCTTTT------AAATGATATTTCAA----------------------------------------------------------------------------------TCGAGCGTGTTCG----------------------------------------------ATASizeHit CountTotal NormTotal
No Reads
droBia1
CA-AC--------TACAAC---AACAACA--------------ACCA------GTACAAGCA--------CCA---------ACA---ACAACATCA---------------ACAACAACC------AGA---ACCTC--------------------------------ATCGACG-G-C------GTCA----ATTGCGACGA-----------------------------TGGCTGCC------------------------------------------ATAAATACG-----GTAAGTACGCGA-------CACCGCC-----AACC---------CAAAAC---------------------------------TGAAAA----------------------------AGTAAAT------CAGAGCCAGCAG---------AAAAAACAATTATGGGTCCCGAAA-----------------------------------AA------AAGCGAAACCACAA----------------------------------------------------------------------------------TTGAGAGCAATCA----------------------------------------------ATCSizeHit CountTotal NormTotal
No Reads
droTak1
GCA-C--------AACAAC---AACAATAATACATTGCCA-------------GTTGGGGCA------CAACAGCAACA---TCAGCAA------------------------C---AG---------CAGCAACAACGTG--------------------------------------------------CAACATTGCAACATCCGCCGTT-GCCCAA------T--AGCAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------TCAAACAGGCATCGGTGAAATTGATCGAAGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTCA---GATCCC------------------AASizeHit CountTotal NormTotal
No Reads
droEug1
CA-AC--------AGCAAC---C---G------------------------------AGCTAAAAAAGCAGCA---------GCAACAA------------------------C---AAA---------------------------------------------CAAACAACAACCAACC------AA--CAACA------------------------AACAA-----------------CTGAATTAATGTTTTAAAGTACAAAATAACCGGGAGTAAATCAACAACAAATAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-TTA--AACATATTAAAAACGATTTAATTTA------AAACGCAACATCAA----------------------------------------------------------------------------------TCTAAATTATTCT------------------------------------ACTAAAA----ATSizeHit CountTotal NormTotal
No Reads
dm3
ACATC--------AACAAC---C---------------------------------GAGCTA------CAAAAGCAGCA---ACAACAA------------------------C---AAA---------------------------------------------CAAACAACAACCAA------------CA---------------------------AACAA-----------------CTGAATTAATGTTTTAAAGTACAAAATAACCGGGAGTAAATCAACAACAAATAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-TTA--AACATATTAAAAACGATTTAATTTA------AAACGCAACATCAATCTAAATTATTTAACTAAACATAAAAACAAACACTGCTAGAATTTAAGTCCAA---AAACA---------------------------------------------------------------------------------ACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA--AACATATTAAAAACGATT...........................................................................................................................................................................2015.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CATC--------AACAAC---C---------------------------------GAGCTA------CAAAAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAAACAAACACTGCTAGAATTT...................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAACACTGCTAGAATT....................................................................................................1714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000202000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTAGAATTTAAGTCC.............................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................AAAATAACCGGGAGTAAATCAAC...................................................................................................................................................................................................................................................................................................................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAAACAAACACTGCTAGAATTTA..................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................AAC---C---------------------------------GAGCTA------CAAAAGCAGCA---AC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CATC--------AACAAC---C---------------------------------GAGCTA------CAAAAGCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAAACAAACACTGCTAGAATTTAAG................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAACAAACACTGCTAGAATT....................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................AATAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-TTA--AACATATTAAAAACGATT...........................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACACTGCTAGAATTTAAGT...............................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................AAAAGCAGCA---ACAACAA------------------------C---AAA---------------------------------------------C............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACAAACACTGCTAGAATT....................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................ATAACCGGGAGTAAATCAACAACAAATAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------....................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAACAAACACTGCTAGAAT.....................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAAACAAACACTGCTAGA.......................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACTGCTAGAATTTAAGTCCA............................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TC--------AACAAC---C---------------------------------GAGCTA------CAAAAGCAGCA---................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTGCTAGAATTTAAGTCC.............................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAAAACAAACACTGCTAG........................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CATC--------AACAAC---C---------------------------------GAGCTA------CAAAAGCAGCA---A...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAAACAAACACTGCTAGAA......................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTGCTAGAATTTAAGT...............................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................AACCGGGAGTAAATCAACAACAAATAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-..................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................TAACCGGGAGTAAATCAACAACAAA.............................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACACTGCTAGAATTTAAGTCC.............................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CATC--------AACAAC---C---------------------------------GAGCTA------CAAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACACTGCTAGAATTA...................................................................................................1712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAACACTGCTAGAATTTAAGTCC.............................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ACAAC---C---------------------------------GAGCTA------CAAAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................TGAATTAATGTTTTAAAGTACAAAATA....................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................TACAAAATAACCGGGAGTAAATCAAC...................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................AACAACAAATAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-TTA--AACATATT.....................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................CAACAACCAA------------CA---------------------------AACAA-----------------CTGAATTAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................CAACAACCAA------------CA---------------------------AACAA-----------------CTGAATTAAT......................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CATC--------AACAAC---C---------------------------------GAGCTA------CAAAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAACACTGCTAGAATT....................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAAAACGATTTAATTTA------AAACGCAACAT...................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAAACAAACACTGCTAGAAT.....................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTAATTTA------AAACGCAACATCA.................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AC---C---------------------------------GAGCTA------CAAAAGCAGCA---AC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................ACCAA------------CA---------------------------AACAA-----------------CTGAATTAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................CTGAATTAATGTTTTAAAGTA...........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTAGAATTTAAGTCCAA---AAACA---------------------------------------------------------------------------------AC2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................C---------------------------------GAGCTA------CAAAAGCAGCA---ACAACAA------------------------C---A............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................AACCAA------------CA---------------------------AACAA-----------------CTGAATTAATGT....................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................AAAGCAGCA---ACAACAA------------------------C---AAA---------------------------------------------CA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................CAAAATAACCGGGAGTAAATCAACAACAAA.............................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................AA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-TTA--AACATATTAAAAACGA.............................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAACACTGCTAGAATTTAAGT...............................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CATC--------AACAAC---C---------------------------------GAGCTA------CAAAAGCAGCA---AC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............AACAAC---C---------------------------------GAGCTA------CAAAAGCAGCA---AC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACACTGCTAGAATTTAAG................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................CCGGGAGTAAATCAACAACAAATAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------....................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............CAAC---C---------------------------------GAGCTA------CAAAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..ATC--------AACAAC---C---------------------------------GAGCTA------CAAAAGCAGCA---A...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AC---C---------------------------------GAGCTA------CAAAAGCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................ACCGGGAGTAAATCAACAACAAATAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-..................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................AATAACCGGGAGTAAATC......................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................CAACCAA------------CA---------------------------AACAA-----------------CTGAATTA........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................ACAA------------------------C---AAA---------------------------------------------CAAACAACAACCAA------------CA---------------------------AAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................AAATAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-TTA--AACATATTAAAAAC...............................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AC---C---------------------------------GAGCTA------CAAAAGCAGCA---................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTGCTAGAATTTAAGTCCAA---AAACA---------------------------------------------------------------------------------A.2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..ATC--------AACAAC---C---------------------------------GAGCTA------CAAAAGCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACAAACACTGCTAGAATTT...................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................ACCAA------------CA---------------------------AACAA-----------------CTGAATTAATGT....................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............AACAAC---C---------------------------------GAGCTA------CAAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............ACAAC---C---------------------------------GAGCTA------CAAAAGCAGCA---ACAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................ATGTTTTAAAGTACAAAATAACCGGGA.............................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAACACTGCTAGAATTTAAGTC..............................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TC--------AACAAC---C---------------------------------GAGCTA------CAAAAGCAGCA---ACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................TTTTAAAGTACAAAATAACCGGGAGTAAA........................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TC--------AACAAC---C---------------------------------GAGCTA------CAAAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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droSim2
GCA-C--------AGCAAC---AACAACAACACATTGCCA-------------GTAGGGGCA------CAGCAGCAGCA---GCAGCAG------------------------C---AT---------CAACAACAACGTG--------------------------------------------------CAACATTGCAACATCCACCGCT-GCCCAA------C--AGCAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------TCAAGCAGGCATCGGTGAAATTAATC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................................AGCAG------------------------C---AT---------CAACAACAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1880.88700000700000000000
................................CATTGCCA-------------GTAGGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1560.17100000010000000000
droSec2
ACAGCATACG---CACAGCAACAACAACAACACATTGCCA-------------GTAGGGGCA------CAGCAGCAGCAGCAG---CAG------------------------C---ATC------AACAACAACAGCGTG--------------------------------------------------CAACATTGCAACATCCACCGCT-GCCCAA------C--AGCAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------TCAAGCAGGCATCGGTGAAATTAATC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................CA------CAGCAGCAGCAGCAG---CAG------------------------C---.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510010
droYak3
GCACC--------AACAAC---AACAACA---CATTGCCA-------------GTAGGGGCA------CAGCAGCAGCAGCTG---CAG------------------------C---AAC------AACCACAACAACGTG--------------------------------------------------CAACATTGCAACATCCACCGCT-GCCCAA------C--AGCAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------TCAAGCAGGCATCGGTGAAATTGATCGAAGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTCA---GATCCC------------------AASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................ACA---CATTGCCA-------------GTAGGGGCA------CAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000
droEre2
GCAGA--------GACAAC---AACAACA-----------CCACCAC-------------CA------CCATAACAAC---AACA---ACAACAGCA---------------GCAGCAACT------ACA---ACAAC--------------------------------AACAACA-A-C------AACA----AGAGC------------------AG------C--AGCAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------C--AGCAAGCGTTAACGAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACT------TATTGGTATT--AASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCGTTAACGAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACT------TATTGG........2311.0010000100
..........................................................................................................................................................................AACAACA-A-C------AACA----AGAGC------------------AG------C--AG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
................................................................................................................................................................................A-A-C------AACA----AGAGC------------------AG------C--AGCAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------C--A........................................................................................................................................................................................................................................................2411.0010001000
.................................................................................AACA---ACAACAGCA---------------GCAGCAACT------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.5010000010
................................................................................................................................CA---ACAAC--------------------------------AACAACA-A-C------AACA----...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0511000000
.................................................................................AACA---ACAACAGCA---------------GCAGCAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000

Generated: 05/16/2015 at 11:31 PM