ID:

dvi_4484

 Coordinate:

scaffold_12855:8364507-8364657 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.9 -8.6

Flybase annnotation

exon [dvir_GLEANR_10063:5]; CDS [Dvir\GJ10115-cds]; intron [Dvir\GJ10115-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AGGATATCCAAACGGATGCCAATCTGGATGCCATGGAGAAAAAGGAAAAGGTAAACATCCGTCAATTCTCTGGAAACAATCGCAATTAACTACACATATATTTTTTTTCGTCTTGTGCAGATGGAGCAGCTGGATTTGGATGGCTGCCCCATTGCCGACTTGGGCCTGGACTTTGTATTGCCCGGACATGCCAATATTGAGCTGTGTCGTGGCGGACGCGATACGCCCGTTACGGTGCACAACTTGCATCA
*****************************************************************************************************************************************....((((((.(((..(((......))).))).....)))..))).******************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 V047
embryo
 GSM1528803
follicle cells		 SRR060663
160_0-2h_embryos_total
 M061
embryo
 SRR060682
9x140_0-2h_embryos_total
 SRR060665
9_females_carcasses_total
 SRR1106729
mixed whole adult body
 M027
male body		 SRR060681
Argx9_testes_total
 SRR060660
Argentina_ovaries_total
 SRR060662
9x160_0-2h_embryos_total
 SRR060664
9_males_carcasses_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060687
9_0-2h_embryos_total
 SRR060657
140_testes_total
 SRR060659
Argentina_testes_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060667
160_females_carcasses_total
 SRR060670
9_testes_total
 SRR060672
9x160_females_carcasses_total
 SRR060674
9x140_ovaries_total
 SRR060678
9x140_testes_total
 SRR060679
140x9_testes_total
 SRR060680
 9xArg_testes_total
 SRR1106726
embryo_14-16h
 SRR1106727
larvae
 V116
male body		 V053
head
 SRR060673
9_ovaries_total
.........................................................................................................................................GGATGGCTGCCCCATTGCCGAC............................................................................................ 22 0 1 4.00 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................GTGTCGTAGCTAACGCGATA............................ 20 3 3 2.67 8 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
......................................................................................................................................................................................................GAGCTGTGTCGTGGCGGACGCGAT............................. 24 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................CATGCCAATATTGAGCTGTGTCGTGGC...................................... 27 0 1 2.00 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................CCATGGAGAAAAAGGAAAA.......................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................GCCAATCTGGATGCCATGGA...................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......TCCAAACGGATGCCAATCTGGATGCCAT......................................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................AGATGGAGCAGCTGGATTT.................................................................................................................. 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................CTGGATGCCATGGAGAAAAAG............................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................CCTGGACTTTGTATTGCCC.................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................CAATATTGAGCTGTGTCGTGGCG..................................... 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................ATATTGAGCTGTGTCGTGGC...................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................ATCTGGATGCCATGGAGAAAAAG............................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CGTGGCGGACGCGATACGC......................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.................GCCAATCTGGATGCCATGGAG..................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..GATATCCAAACGGATGCCAATCT.................................................................................................................................................................................................................................. 23 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................GCTGTGTCGTGGCGGACGCGATA............................ 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............GATGCCAATCTGGATGCCATGGAGA.................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................AGCTGTGTCGTGGCGGACGC................................ 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...............ATGCCAATCTGGATGCCATGGA...................................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................GATGGAGCAGCTGGATTTGGATGGC........................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................CGCGATACGCCCGTTACGGGGCAC........... 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................CGGACATGCCAATATTGAGCT................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................TTGAGCTGTGTCGTGGCG..................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................GCAGCTGGATTTGGATGGC........................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.....................................................................................................................................................................................................................GGACGCGATACGCCCGTTACGGT............... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................GTATTGCCCGGACATGCCA.......................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................CGCGATACGCCCGTTACGTGGCAC........... 24 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................ATTGAGCTGTGTCGTGGCGGA................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................GGATTTGGATGGCTGCCCCATTGCC............................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................TTGGACTTTGTATTGCCCGGACATGCC........................................................... 27 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..............GATGCCAATCTGGATGCCATGGA...................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................GATGCCATGGAGAAAAAGGAAAA.......................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................AGCTGGATTTGGATGGCTGCCC...................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................GTATTGCCCGGACATGCCAAT........................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................ATCTGGATGCCATGGAGA.................................................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................GGTACGGTGCACAACTTGCAT.. 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................AATCTGGATGCCATGGAGAAAAA................................................................................................................................................................................................................ 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................CTGGATGCCATGGAGAAAAA................................................................................................................................................................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................CTGGATGCCATGGAGAAAA................................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................GCTGGATTTGGATGGCTG......................................................................................................... 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................TGACAATCTGGATGCCATGGA...................................................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................CAATATTGAGCTGTGTCGTGGC...................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........ACGGATGCCAATCTGGATGCCATGGAGAA................................................................................................................................................................................................................... 29 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................TGCCGACTTGGGCCTGGA................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................ATTGAGCTGTGTCGTGGCG..................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................CTGGACTTTGTATTGCCC.................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................ATATTGAGCTGTGTCGTGGCGGA................................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................GACTTTGTATTGCCCGGACATGCCAATATTG.................................................... 31 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
......................................................................................................................................................................................................................GACGCGATACGCCCGTTACGGTGCAC........... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................CTGGATTTGGATGGCTGCCCCATTGCC............................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............ATGCCAATCTGGATGCCATGGAGA.................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................GACTTTGTATTGCCCGGACATGCCAAT........................................................ 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........CAAACGGATGCCAATCTGGATGCC........................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................GATGCCATGGCGAAAAAGGAAAAGA........................................................................................................................................................................................................ 25 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................GCCATGGAGAAAAAGGAAAAGAT....................................................................................................................................................................................................... 23 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................TTGTCTTGCCCGGACATGCCAAT........................................................ 23 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................ATGCCAATATTGAGCTGTGTCGTGGCG..................................... 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................AGTTGGATTTGGATGGCTGC........................................................................................................ 20 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................CAATCTGGATGCCATGGAG..................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................AGCTGGATTTGGATGGCT.......................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............GGATGCCAATCTGGATGCC........................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................ATTGAGCTGTGTCGTGGCGG.................................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................CTGGATTTGGATGGCTGCC....................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
......................................................................................................................................................................................................GAGCTGTGTCGTGGCGGCCGCGAT............................. 24 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................GCGATACGCCCGTTACGGTGCA............ 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................ATGCCAATATTGAGCTGTGTCGTG........................................ 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................GATGGAGCAGCTGGATTT.................................................................................................................. 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CGTAGCTAACGCGATACGCCC....................... 21 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
...........................................................................................................................................................................................................GTGTCGTAGCTGACGCGA.............................. 18 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................TGAGCCGTGTCTTGTCGGAC.................................. 20 3 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................GTGTCGTAGCTAACGCGAT............................. 19 3 13 0.23 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................GTCTTTGGATTGCCCGGA................................................................. 18 2 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................TGAGATGTGACGTCGCGGA................................... 19 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
...................................................................................................................................................................................................................................AGTTACGGTGCACAAAT....... 17 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................TGAAACAATCGCAATTGACC................................................................................................................................................................ 20 3 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................TGTCGTAGCTAACGCGATA............................ 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................CGGGTTACGGTGCCCAAC........ 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................TTGAGTTGCTGGATTTGGAT.............................................................................................................. 20 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................GTGTCGTAGCTAACGCGA.............................. 18 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................CCGGTTACGGTGCTCAAAT....... 19 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TCCTATAGGTTTGCCTACGGTTAGACCTACGGTACCTCTTTTTCCTTTTCCATTTGTAGGCAGTTAAGAGACCTTTGTTAGCGTTAATTGATGTGTATATAAAAAAAAGCAGAACACGTCTACCTCGTCGACCTAAACCTACCGACGGGGTAACGGCTGAACCCGGACCTGAAACATAACGGGCCTGTACGGTTATAACTCGACACAGCACCGCCTGCGCTATGCGGGCAATGCCACGTGTTGAACGTAGT
********************************************************************....((((((.(((..(((......))).))).....)))..))).***************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V053
head
 SRR060655
9x160_testes_total
 SRR060669
160x9_females_carcasses_total
 GSM1528803
follicle cells		 V116
male body		 SRR060682
9x140_0-2h_embryos_total
 SRR060677
Argx9_ovaries_total
................................................................................................................................................................................TGACGAGACTGTACGGTTATA...................................................... 21 3 2 0.50 1 1 0 0 0 0 0 0
......CGGTTTGCCTACGGTTAGA.................................................................................................................................................................................................................................. 19 1 3 0.33 1 0 1 0 0 0 0 0
.............................................................................TTAGCCTTAATTGATGTTT........................................................................................................................................................... 19 2 7 0.14 1 0 0 0 1 0 0 0
..........................................................................................................................CCGCTTCGACCTAAACCTAG............................................................................................................. 20 3 7 0.14 1 0 0 1 0 0 0 0
..................................................................................................ATTAAACAAAGTAGAACACGTC................................................................................................................................... 22 3 7 0.14 1 0 0 1 0 0 0 0
..................................................................AGAGACCTTTATTCCCGTTA..................................................................................................................................................................... 20 3 8 0.13 1 0 0 0 0 1 0 0
..................................................................................................................CAAGTCTACCTGGTCGAC....................................................................................................................... 18 2 15 0.07 1 0 0 0 0 0 1 0
.......................................................................................................AAAAAATACAACACGTCTACC............................................................................................................................... 21 3 20 0.05 1 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12855:8364457-8364707 - dvi_4484 AGGATATCCAAACGGATGCCAATCTGGATGCCATGGAGAAAAAGGAAAAGGTAAACA----T--CCGT-CA------ATT---------CTCTGG----------------------------AAACAATCGCAA-TTAAC-------------------------------------------------------TAC----------------------------------------------------A-CA-T-------AT------------------A-TTTT-TTTTCGTCTTGTGCAGATGGAGCAGCTGGATTTGGATGGCTGCCCCATTGCCGACTTGGGCCTGGACTTTGTATTGCCCGGACATGCCAATATTGAGCTGTGTCGTGGCGGACGCGATACGCCCGTTACGGTGCACAACTTGCATCA
droMoj3 scaffold_6540:23582343-23582584 - AGGATATCCAAATGGATCCCAATCTAGATGCTATGGAGAAGAAGGAGAAGGTAAACT----TTAATGG-AACTCAA-------------------------------------TCAATTATTAAG-------------CAATT--------------------------------------------------TATTA----------------------------------------------------------ACAAC---------------------------T------CACTTTGGGCAGATGGAGCAATTGGATTTGGATGGCTGTCCCATTGCGGATTTGGGACTAGATTTCGTATTACCCGGACATGCCAACATTGAACTCTGCCGTGGCGGACGCGACACGCCCGTAACCGTGCACAACTTGCATCA
droGri2 scaffold_15074:4959251-4959493 - AGGATATACAGGCTGATCCCAATCAGGATGCCATGGAGAAGAAGGAAAAGGTCAGTCA------AACA------GCAAAGAT-------TTCATTAATTG-----------------------AAAAT--TATCTATGC-----------------------------------------------------------------------------------------------------------------------------------------------------TA--TATTTCTGTATGCAGATGGAGCAACTGGATTTGGATGGCTGCGCCATCGCCGATTTAGGCCTGGACTTTGTGCTGCCCGGCCATGCCAATATTGAGCTGTGTCGTGGTGGACGTGATACGCCCGTTACCGTTCAAAATTTGCATCA
droWil2 scf2_1100000004943:15077084-15077334 + AATATATTTTCGCTGATCCAAATATTGATGCCATGGAGAAGACCGAAAAGGTAAGAGACGAC--ATGT-CG------------------CCTTTA----------------------------AAATCATTGCAA-TATAA-------------------------------------------------------TAC----------------------------------------------------AATA-TCA---------------------------CCTT--TCTTTTGACTTTTAGATTGAGCAACTGGACTTAGATGGTTGTCCCATTGCCGATTTGGGCTTGGATTTCGTTCTACCCGGTCATGCTAATATTGAATTGTGCCGCGGTGGTCGTGATACTCCAGTGACTATACATAATTTGCATCA
dp5 2:22179601-22179841 + dps_706 AATATCTCCTGTCCGATCCCAACCTGGATGCCATGGAGAAGACAGAGAAGGTGAGTG----TTGATGCCAAATGAA-------------------------------------CCCGCAAATAAG-------------AGTTC---------------------------------------------------------------------------------------------------------------------------------------------TAATTG--TGGATATACTCGTAGATTGAGCAACTGGATCTCGACGGCTGTCCCATAGCCGATTTGGGGCTGGACTTTGTCTTGCCTGGTCACGCCAACATTGAGCTGTGTCGCGGGGGACGCGACACGCCCGTGACTGTACACAACTTGCGACA
droPer2 scaffold_3:4960716-4960956 + dpe_2493 AATATCTCCTGTCCGATCCCAACCTGGATGCCATGGAGAAGACAGAGAAGGTGAGTG----TTGATGCCAAATGAA-------------------------------------CCCGCAAATAAG-------------AGTTC---------------------------------------------------------------------------------------------------------------------------------------------TAATTT--TGGATATACTCGTAGATTGAGCAACTGGATCTCGACGGCTGTCCCATAGCCGATTTGGGGCTCGACTTTGTCTTGCCTGGTCACGCCAACATTGAGCTGTGTCGCGGGGGACGCGACACGCCCGTGACTGTACACAACTTGCGACA
droAna3 scaffold_13340:22833495-22833737 - AGTACATCCTGGCTGATCCAAACATTGATGCCATGGAGAAGACCGAAAAGGTAACA----------CT------ATATAGCT-------TTCCTT------------------------------ATA--TGTAT-TTT-----------------------------------------------------TATACAA----------------------------------------------------A-AA--------------------------------TGTA-TATTCCTCTTATTAGATTGAACAGTTGGACTTGGACGGCTGCCCTATTGCGGATCTGGGCCTTGACTTTGTGCTACCTGGCCATGCCAACATTGAGCTGTGCCGTGGTGGCCGTGATACTCCGGTGACTGTGCACAACTTGCATCA
droBip1 scf7180000396424:1108350-1108594 - AGTACATCCTGGCAGATCCAAACATTGACGCCATGGAGAAGACCGAAAAGGTAAGATA------ACCT-AA------TTGCC-------TCCCTG----------------------------ATTCA--TGTAT-TTAAC-------------------------------------------------------TAT----------------------------------------------------A-A--------------------------------TTAT--TATTTAATTCCTTAGATTGAACAGTTGGACTTGGACGGCTGCCCTATTGCCGATCTGGGCCTTGACTTTGTGCTACCTGGTCATGCCAACATTGAGTTGTGCCGTGGAGGCCGCGATACTCCAGTGACTGTGCACAACTTGCACCA
droKik1 scf7180000302634:305988-306230 - AGTATATACTATCCGATCCCAACATTGATGCCATGGAAAAGACTGAAAAGGTGAGTG----CC-----------------------------------------------------------AAA-------------ATTTCAAATCTTTCGG----------------------------------------------------------------------CATATCTCCGACGACATAA-------------------------------------------------ATCATATTTTCCCAGATTGAGCAACTTGATTTGGACAGCTGCCCCATTGCCGATCTGGGACTGGACTTTGTGCTGCCCGGCCATGCCAATATCGAGTTGTGCCGTGGCGGAAGGGACACTCCAGTGACCGTGCACAATCTGCATCA
droFic1 scf7180000453903:220185-220432 - AATACATTCTCTCCGATCCAAACATCGACGCCATGGAGAAAACAGAGAAAGTAAGTTA------ATCA-AA------ATTCT-------------------------------TACATTGTGAAAACG--TTTGATTTG-----------------------------------------------------TCATTA----------------------------------------------------------ACCAT---------------------------T------TCGTTTTTTCAGATTGAACAACTTGACCTGGATGGCTGCCCCATCGCAGACCTGGGCCTGGACTTCATGCTGCCCGGACATTCCACCATTGAGCTGTGCCGTGGCGGTCGCGATACACCAGTGACCGTGCACAACCTGCACCA
droEle1 scf7180000491104:2383988-2384166 - C-----------------------------------------------------------------------------------------TCTCG----------------------------AAATA--TTCCTTTTC-----------------------------------------------------TAATTAA----------------------------------------------------A-AA--------------------------------TGT--TATTTTCTTCTCTAGATCGAACAGCTGGACCTGGATGGTTGTCCCATCGCAGATTTGGGCCTGGATTTCGTGCTGCCCGGACATGCCAACATCGAGTTGTGTCGTGGCGGTCGCGATACACCAGTTACTGTCCACAACCTGCACCA
droRho1 scf7180000777661:30464-30623 - AAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAC------------------AATTAT--TTTTTCTTTCTCTAGATAGAACAGTTGGACCTGGATGGTTGCCCCATCGCAGACCTGGGCCTGGACTTTGTCCTGCCCGGACATGCCAACATTGAGTTGTGTCGTGGGGGTCGCGATACTCCAGTAACTGTGCACAACCTGCATCA
droBia1 scf7180000302411:344581-344733 - TAT----TTTGTTAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATTTATAGATTGAACAGCTGGACTTGGATGGCTGCCCTATCTCAGACCTGGGCCTAGACTTCGTATTGCCCGGGCATGCCAACATTGAGTTGTGTCGTGGCGGCCGTGATACGCCTGTGACTGTGCACAACCTCCACCA
droTak1 scf7180000415261:515776-516082 + AGTACATTCTGACCGACCCAAACATTGATGCCATGGAAAAGACAGAAAAGGTGAGTAA------GTCA------TAACAGA----AAAT------------------------------GTAAAG-------------GTTTTAAATATGTCGGTGTGATTATGAACAAAACGAGA----AATTTACTTCTTAAAT--GTCCATTATAGCATTTAAT----------------------------------A-AAC-T----------------------------CATT--TCTTTGATTTTCTAGATTGAACAGCTGGACTTGGATGGCTGCCCCATCGCAGACTTGGGCCTGGACTTTGTACTGCCCGGACATGCCAACATTGAGTTGTGCCGCGGCGGTCGTGATACACCAGTGACTGTCCACAACCTCCACCA
droEug1 scf7180000409759:547986-548325 - AGTACATTTTGTCCGATCCAAACATCGATGCCATGGAGAAGACAGAAAAGGTGAGTAATG-CT------AT------ATTCT-------------------------------TAG------------------------TTTTAATTTGTAGATGTC----TGGACAAAATTAGATAGGATTCTTCCTTCCAAAT--GTATAATAT-----CT---TTATCGGCG---ATCCGTTGACATGATTCTAAGA-----------AAACATTGTTGAACTGCTCTGTAATTAA--TTTATAAATTTTCAGATTGAACAGCTGGACCTAGACGGCTGCCCAATTGCAGACCTAGGTCTAGACTTCGTACTGCCCGGACATGCCAACATTGAGTTGTGTCGTGGCGGTCGCGATACACCTGTCACTGTGCACAACCTCCACCA
dm3 chr3R:614167-614452 - AGTACATTCTATCCGATCCAAACATCGATGCCATGGAAAAGACTGAAAAGGTAAGTTACG-CTTTTACCAAGTAACAAATTAAGT----AT------TTTAAAATCATTTTTGT------------------CCTTTTT-----------------------------------------------------TGATTAGTATTTTATA-CATTTCAT----------------------------------A-AAT-GTACT---------------------------------TATTTTTTTCAGATTGAACAGCTAGACTTGGATGGCTGTCCCATTGCTGACCTAGGCTTGGACTTTGTATTGCCCGGACATGCCAATATAGAGTTGTGTCGGGGCGGTCGCGATACACCTGTCACTGTGCACAACCTTCACCA
droSim2 3r:548676-548961 - dsi_17146 AGTACATTCTATCCGATCCAAACATCGATGCCATGGAAAAGACTGAAAAGGTAAGTTGGG-CTTTAACCAAATAACAAATTCAAT----AT------CTTGAACTAAGTTTAGT------------------CCTTTTT-----------------------------------------------------TAATTAGTATTTTATA-CATTTCAT----------------------------------A-AAA-TTACC---------------------------------TATTTTTTTCAGATTGAACAGCTAGACTTGGATGGCTGCCCAATTGCTGACCTAGGCTTGGACTTCGTATTGCCCGGACATGCCAATATAGAGTTGTGCCGCGGCGGTCGCGATACACCTGTCACTGTGCACAACCTTCATCA
droSec2 scaffold_6:714080-714365 - AGTACATTCTATCCGATCCAAACATCGATGCCATGGAAAAGACTGAAAAGGTAAGTTGGG-CTTTTACCAAATAACAAATTCAAT----AT------CTTGAATTAAGTTTAGT------------------CCTTTTT-----------------------------------------------------TAATTAGAATTTTATA-CATTTCAT----------------------------------A-AAA-TTTCC---------------------------------TATTTTTTTCAGATTGAACAGCTAGACTTGGATGGCTGCCCAATTGCTGACCTAGGCTTGGACTTCGTATTGCCCGGACATGCCAATATAGAGTTGTGCCGCGGCGGTCGCGATACACCTGTCACTGTGCACAACCTTCATCA
droYak3 3R:933261-933537 - AGTTCATTCTATCCGATCCAAACATCGATGCCATGGAAAAGACTGAAAAGGTAAGTTACT-TTTGTACCAAATAAAAAATACA--------------TTTAAGTTAATTTTAGTCCGT-----------------------------------------------------------------------------------------A-AATTGCGT----------------------------------A-AAT-TTATATATC------------------TATTTT--TATTTTTTTTTTAAGATTGAACAGCTAGACTTGGATGGCTGCCCAATCGCAGACCTAGGCTTGGACTTCGTATTGCCCGGACATGCCAATATAGAGTTGTGTCGAGGAGGTCGTGACACACCTGTTACTGTCCACAACCTTCACCA
droEre2 scaffold_4770:921550-921702 - ATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTT--TACTTATTTTTTCAGATTGAACAGCTAGACTTAGATGGCTGCCCGATCGCAGACCTGGGCTTGGACTTCGTATTACCCGGACATGCCAATATAGAGTTGTGTCGAGGCGGTCGCGATACACCTGTCACTGTGCACAACCTTCACCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
AGGATATCCAAACGGATGCCAATCTGGATGCCATGGAGAAAAAGGAAAAGGTAAACA----T--CCGT-CA------ATT---------CTCTGG----------------------------AAACAATCGCAA-TTAAC-------------------------------------------------------TAC----------------------------------------------------A-CA-T-------AT------------------A-TTTT-TTTTCGTCTTGTGCAGATGGAGCAGCTGGATTTGGATGGCTGCCCCATTGCCGACTTGGGCCTGGACTTTGTATTGCCCGGACATGCCAATATTGAGCTGTGTCGTGGCGGACGCGATACGCCCGTTACGGTGCACAACTTGCATCASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....................................................................................................................................................................................................................................................................................................................................GGATGGCTGCCCCATTGCCGAC............................................................................................2214.004000000000000000000000000000000000000000000000000000000000000004
.................................................................................................................................................................................................................................................................................................................................................................................................GAGCTGTGTCGTGGCGGACGCGAT.............................2412.002000000000000000000000000000000000000000000000000000000000000002
.....................................................................................................................................................................................................................................................................................................................................................................................CATGCCAATATTGAGCTGTGTCGTGGC......................................2712.002000100000000010000000000000000000000000000000000000000000000000
..............................CCATGGAGAAAAAGGAAAA.....................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000010000000000000000000000000000000000000000000000000
.................GCCAATCTGGATGCCATGGA.................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000010000000000000000000000000000000
......TCCAAACGGATGCCAATCTGGATGCCAT....................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................AGATGGAGCAGCTGGATTT..................................................................................................................1911.001000000000000010000000000000000000000000000000000000000000000000
.......................CTGGATGCCATGGAGAAAAAG..........................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................CCTGGACTTTGTATTGCCC....................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................CAATATTGAGCTGTGTCGTGGCG.....................................2311.001000000000000010000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................ATATTGAGCTGTGTCGTGGC......................................2011.001000000000000000000000000000000000001000000000000000000000000000
.....................ATCTGGATGCCATGGAGAAAAAG..........................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000010000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................CGTGGCGGACGCGATACGC.........................1911.001000000000000000000000000000001000000000000000000000000000000000
.................GCCAATCTGGATGCCATGGAG................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
..GATATCCAAACGGATGCCAATCT.............................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000001000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................GCTGTGTCGTGGCGGACGCGATA............................2311.001000000000000010000000000000000000000000000000000000000000000000
..............GATGCCAATCTGGATGCCATGGAGA...............................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000100000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................AGCTGTGTCGTGGCGGACGC................................2011.001000000000000000000000000000010000000000000000000000000000000000
...............ATGCCAATCTGGATGCCATGGA.................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000001000
..................................................................................................................................................................................................................................................................................................................GATGGAGCAGCTGGATTTGGATGGC...........................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................CGGACATGCCAATATTGAGCT................................................2111.001000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................................................................................................................................................................................................................................................................................................TTGAGCTGTGTCGTGGCG.....................................1811.001000000000000000000000000000000000000010000000000000000000000000
........................................................................................................................................................................................................................................................................................................................GCAGCTGGATTTGGATGGC...........................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000010
................................................................................................................................................................................................................................................................................................................................................................................................................GGACGCGATACGCCCGTTACGGT...............2311.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................GTATTGCCCGGACATGCCA..........................................................1911.001000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................ATTGAGCTGTGTCGTGGCGGA...................................2111.001000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................GGATTTGGATGGCTGCCCCATTGCC...............................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
..............GATGCCAATCTGGATGCCATGGA.................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
..........................GATGCCATGGAGAAAAAGGAAAA.....................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000001000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................AGCTGGATTTGGATGGCTGCCC......................................................................................................2211.001000000000000000000000000000000010000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................GTATTGCCCGGACATGCCAAT........................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.....................ATCTGGATGCCATGGAGA...............................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000001000
....................AATCTGGATGCCATGGAGAAAAA...........................................................................................................................................................................................................................................................................................................................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
.......................CTGGATGCCATGGAGAAAAA...........................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
.......................CTGGATGCCATGGAGAAAA............................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000010000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................GCTGGATTTGGATGGCTG.........................................................................................................1811.001000000000000010000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................CAATATTGAGCTGTGTCGTGGC......................................2211.001000000000000000000000000000000000000000000000000000000000100000
...........ACGGATGCCAATCTGGATGCCATGGAGAA..............................................................................................................................................................................................................................................................................................................................................................................................................2911.001000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................................TGCCGACTTGGGCCTGGA.................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................ATTGAGCTGTGTCGTGGCG.....................................1911.001000000000000000000001000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................CTGGACTTTGTATTGCCC....................................................................1811.001100000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................ATATTGAGCTGTGTCGTGGCGGA...................................2311.001000000000100000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................GACTTTGTATTGCCCGGACATGCCAATATTG....................................................3111.001000000000000000000000000000000000000000000000000000000100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................GACGCGATACGCCCGTTACGGTGCAC...........2611.001000000000000000000000000000000000000000000000000000000000001000
............................................................................................................................................................................................................................................................................................................................CTGGATTTGGATGGCTGCCCCATTGCC...............................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
...............ATGCCAATCTGGATGCCATGGAGA...............................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000100000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................GACTTTGTATTGCCCGGACATGCCAAT........................................................2711.001000000000001000000000000000000000000000000000000000000000000000
........CAAACGGATGCCAATCTGGATGCC......................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................ATGCCAATATTGAGCTGTGTCGTGGCG.....................................2711.001000000000000000000000000000000001000000000000000000000000000000
...................CAATCTGGATGCCATGGAG................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000100000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................AGCTGGATTTGGATGGCT..........................................................................................................1811.001000000000010000000000000000000000000000000000000000000000000000
.............GGATGCCAATCTGGATGCC......................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000100000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................ATTGAGCTGTGTCGTGGCGG....................................2011.001000100000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................CTGGATTTGGATGGCTGCC.......................................................................................................1911.001000000000000000000000000000000100000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................GCGATACGCCCGTTACGGTGCA............2211.001000000000000000000000000000000000000000000000000000000000001000
......................................................................................................................................................................................................................................................................................................................................................................................ATGCCAATATTGAGCTGTGTCGTG........................................2411.001000000000000100000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................GATGGAGCAGCTGGATTT..................................................................................................................1811.001000000000000000000000000000000000001000000000000000000000000000
droMoj3
AGGATATCCAAATGGATCCCAATCTAGATGCTATGGAGAAGAAGGAGAAGGTAAACT----TTAATGG-AACTCAA-------------------------------------TCAATTATTAAG-------------CAATT--------------------------------------------------TATTA----------------------------------------------------------ACAAC---------------------------T------CACTTTGGGCAGATGGAGCAATTGGATTTGGATGGCTGTCCCATTGCGGATTTGGGACTAGATTTCGTATTACCCGGACATGCCAACATTGAACTCTGCCGTGGCGGACGCGACACGCCCGTAACCGTGCACAACTTGCATCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........................................................................................................................................................................................................................................................................................................................ATTGGATTTGGATGGCTGTCCCATT..................................................................................................2511.001000001
....................................................................................................................................................................................................................................................................................................................................................................................................CTCTGCCGTGGCGGACGCGACACGCCC.......................2711.001000010
.....................................................................................................................................................................................................................................................................................................................GGAGCAATTGGATTTGGATGGCC..........................................................................................................2311.001000010
............................................................................................................................................................................................................................................................................................................................................GTCCCATTGCGGATTTGGGA......................................................................................2011.001100000
........................................................................................................................................................................................................................................................................................................................GCAATTGGATTTGGATGGCT..........................................................................................................2011.001100000
.........AAATGGATCCCAATCTAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.....................................................................................................................................................................................................................................................................................................................GGAGCAATTGGATTTGGATGGCT..........................................................................................................2311.001000001
droGri2
AGGATATACAGGCTGATCCCAATCAGGATGCCATGGAGAAGAAGGAAAAGGTCAGTCA------AACA------GCAAAGAT-------TTCATTAATTG-----------------------AAAAT--TATCTATGC-----------------------------------------------------------------------------------------------------------------------------------------------------TA--TATTTCTGTATGCAGATGGAGCAACTGGATTTGGATGGCTGCGCCATCGCCGATTTAGGCCTGGACTTTGTGCTGCCCGGCCATGCCAATATTGAGCTGTGTCGTGGTGGACGTGATACGCCCGTTACCGTTCAAAATTTGCATCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..................CCAATCAGGATGCCATGGA.................................................................................................................................................................................................................................................................................................................................................................................................................1912.00220
..............................................................................................................................................................................................................................................................................................................................................................................................ATTGAGCTGTGTCGTGGTGGA...................................2111.00101
...................................................................................................................................................................................................................................................................................................................................................................GACTTTGTGCTGCCCGGC.................................................................1811.00110
........................................................................................................................................................................................................................................................................................................................................................ATTTAGGCCTGGACTTTGT...........................................................................1911.00110
..............................................................................................................................................................................................................................................................................................................................................................................................ATTGAGCTGTGTCGTGGTGGACGTG...............................2511.00101
...............................................................................................................................................................................................................................................................................................................................................................................................TTGAGCTGTGTCGTGGTGGACGTG...............................2411.00101
...........................................................................................................................................................................................................................................................................................................................................................................................AATATTGAGCTGTGTCGTGGTG.....................................2211.00101
droWil2
AATATATTTTCGCTGATCCAAATATTGATGCCATGGAGAAGACCGAAAAGGTAAGAGACGAC--ATGT-CG------------------CCTTTA----------------------------AAATCATTGCAA-TATAA-------------------------------------------------------TAC----------------------------------------------------AATA-TCA---------------------------CCTT--TCTTTTGACTTTTAGATTGAGCAACTGGACTTAGATGGTTGTCCCATTGCCGATTTGGGCTTGGATTTCGTTCTACCCGGTCATGCTAATATTGAATTGTGCCGCGGTGGTCGTGATACTCCAGTGACTATACATAATTTGCATCASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................ATATTGATGCCATGGAGAAGACCGA........................................................................................................................................................................................................................................................................................................................................................................................................2512.00200020
..................................................................................................................................................................................................................................................................................................................GATTGAGCAACTGGACTTAGATGGTT..........................................................................................................2612.00200020
..........................................................................................................................................................................................................................................................................................................................AACTGGACTTAGATGGTTG.........................................................................................................1911.00100010
....................................................................................................................................................................................................................................................................................................................TTGAGCAACTGGACTTAGATGGT...........................................................................................................2311.00100100
.......................................................................................................................................................................................................................................................................................................................AGCAACTGGACTTAGATG.............................................................................................................1811.00100010
.......................................................................................................................................................................................................................................................................................................................................................GATTTGGGCTTGGATTTCGTTCTAC......................................................................2511.00100010
.....................ATATTGATGCCATGGAGAA..............................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
...................................................................................................................................................................................................................................................................................................................ATTGAGCAACTGGACTTAGATGGTT..........................................................................................................2511.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................AATTGTGCCGCGGTGGTC..................................1811.00100010
........................TTGATGCCATGGAGAAGACCGAAAAGA...................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
.......................ATTGATGCCATGGAGAAGAC...........................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
.......................................................................................................................................................................................................................................................................................................................................................GATTTGGGCTTGGATTTCGTT..........................................................................2111.00100010
.....................................................................................................................................................................................................................................................................................................................................................................................CATGCTAATATTGAATTGTGCCGCGGT......................................2711.00101000
.................CCAAATATTGATGCCATGGAGAA..............................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
.................................................................................................................................................................................................................................................................................................................................CTTAGATGGTTGTCCCATTGCC...............................................................................................2211.00100010
.ATATATTTTCGCTGATCCAAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
.................................................................................................................................................................................................................................................................................................................AGATTGAGCAACTGGACC...................................................................................................................1811.00110000
................................................................................................................................................................................................................................................................................................................................................................TTGGATTTCGTTCTACCCGGTC................................................................2211.00100010
..........................................................................................................................................................................................................................................................................................................................AACTGGACTTAGATGGTTGTC.......................................................................................................2111.00110000
..................CAAATATTGATGCCATGGAGAAG.............................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
....................AATATTGATGCCATGGAGAA..............................................................................................................................................................................................................................................................................................................................................................................................................2011.00100001
.......................................................................................................................................................................................................................................................................................................................................................GATTTGGGCTTGGATTTCGT...........................................................................2011.00100010
...................AAATATTGATGCCATGGAGAAGAC...........................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
....................AATATTGATGCCATGGAGAAGACC..........................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
......................................................................................................................................................................................................................................................................................................................................................CGATTTGGGCTTGGATTTCGTTCTA.......................................................................2511.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................ATTGAATTGTGCCGCGGTGGTCGT................................2411.00100010
..........................................................................................................................................................................................................................................................................................................................AACTGGACTTAGATGGTT..........................................................................................................1811.00100010
.....................................................................................................................................................................................................................................................................................................................................................................TTTCGTTCTACCCGGTCATG.............................................................2011.00100010
...................................................................................................................................................................................................................................................................................................................................................................................................ATTGTGCCGCGGTGGTCGT................................1911.00100100
.................................................................................................................................................................................................................................................................................................................AGATTGAGCAACTGGACT...................................................................................................................1811.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................AATATTGAATTGTGCCGCGGTGGTCGT................................2711.00100100
........................................................................................................................................................................................................................................................................................................................................................ATTTGGGCTTGGATTTCGTTCT........................................................................2211.00100001
.......................ATTGATGCCATGGAGAAGACC..........................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
..................CAAATATTGATGCCATGAG.................................................................................................................................................................................................................................................................................................................................................................................................................1960.17100010
dp5
AATATCTCCTGTCCGATCCCAACCTGGATGCCATGGAGAAGACAGAGAAGGTGAGTG----TTGATGCCAAATGAA-------------------------------------CCCGCAAATAAG-------------AGTTC---------------------------------------------------------------------------------------------------------------------------------------------TAATTG--TGGATATACTCGTAGATTGAGCAACTGGATCTCGACGGCTGTCCCATAGCCGATTTGGGGCTGGACTTTGTCTTGCCTGGTCACGCCAACATTGAGCTGTGTCGCGGGGGACGCGACACGCCCGTGACTGTACACAACTTGCGACASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................GTGAGTG----TTGATGCCAAATGAA-------------------------------------CC...................................................................................................................................................................................................................................................................................................................................24134.003401901102029
.............................................................................................................................................................................................................................................................................................AATTG--TGGATATACTCGTAG...................................................................................................................................2018.0080110001230
..................................................GTGAGTG----TTGATGCCAAATGAA-------------------------------------CCC..................................................................................................................................................................................................................................................................................................................................2512.0020010001000
..............................................................................................................................................................................................................................................................................................ATTG--TGGATATACTCGTAG...................................................................................................................................1912.0020100100000
..................................................GTGAGTG----TTGATGCCAAATGAA-------------------------------------C....................................................................................................................................................................................................................................................................................................................................2312.0020010001000
............................................................................................................................................................................................................................................................................................TAATTG--TGGATATACTCGTAGA..................................................................................................................................2212.0020000000101
..................CCAACCTGGATGCCATGGAGAAGA............................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010000000
..................................................GTGAGTG----TTGATGCCAAATGA...........................................................................................................................................................................................................................................................................................................................................................................2111.0010000100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................GACTGTACACAACTTGCGACA2111.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................AGCTGTGTCGCGGGGGAC..................................1811.0011000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................CGCCCGTGACTGTACACAACTTGC....2411.0010100000000
..................................................GTGAGTG----TTGATGCCAAATG............................................................................................................................................................................................................................................................................................................................................................................2011.0010000010000
............................................................................................................................................................................................................................................................................................TAATTG--TGGATATACTCGTA....................................................................................................................................2011.0010000100000
..............................................................................................................................................................................................................................................................................................................................................CCCATAGCCGATTTGGGGCTGG..................................................................................2211.0010100000000
..........................................................................................................................................................................................................................................................................................................................AACTGGATCTCGACGGCTGTCCCATAGCCGATTTGGGGCT....................................................................................4011.0010000000001
.............................................................................................................................................................................................................................................................................................................................................................................................................GGGGGACGCGACACGCCCGTGACTGTA..............2711.0010000000001
.............................................................................................................................................TC---------------------------------------------------------------------------------------------------------------------------------------------TAATTG--TGGATATACTCGTAG...................................................................................................................................2311.0010100000000
.............................................................................................................................................................................................................................................................................................AATTG--TGGATATACTCGT.....................................................................................................................................1811.0010000000100
..................................................GTGAGTG----TTGATGCCAAA..............................................................................................................................................................................................................................................................................................................................................................................1811.0010000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................CGCGGGGGACGCGACACGCCC.......................2111.0010010000000
...........................................................................................................................................................................................................................................................................................................................................................................................AACATTGAGCTGTGTCGCGGGGGACGC................................2711.0010001000000
............................................................................................................................................................................................................................................................................................TAATTG--TGGATATACTCGTAGT..................................................................................................................................2211.0010000000001
.............................................................TTGATGCCAAATGAA-------------------------------------CCCGCA...............................................................................................................................................................................................................................................................................................................................2111.0010100000000
............................................................................................................................................................................................................................................................................................................................................GTCCCATAGCCGATTTGGGGCTGGACT...............................................................................2711.0010100000000
............................................................................................................................................................................................................................................................................................TAATTG--TGGATATACTCGTAG...................................................................................................................................2111.0010000000001
............................................GAGAAGGTGAGTG----TTGATGC..................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100000
...................................................................................................................................................................................................................................................................................................................................TCGACGGCTGTCCCATAGC................................................................................................1911.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................CGCCCGTGACTGTACACAACTTGCGAC.2711.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................CACGCCAACATTGAGCTGTGTCGC.........................................2411.0010100000000
..................................................GTGAGTG----TTGATGCCAAATGAA-------------------------------------CCCGC................................................................................................................................................................................................................................................................................................................................2711.0010010000000
...................................................................................................................................................................................................................................................................................................................ATTGAGCAACTGGATCTCGACGGCT..........................................................................................................2511.0010000000001
.................CCCAACCTGGATGCCATGGA.................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................GGACGCGACACGCCCGTGACTGTACAC...........2711.0010010000000
............................................................................................................................................................................................................................................................................................................................................GTCCCATAGCCGATTTGGGGCTGGA.................................................................................2511.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................CGCGGGGGACGCGACACGCCCGTGA...................2511.0010100000000
...........................................................................................................................................................................................................................................................................................................................................TGTCCCATAGCCGATTTGG........................................................................................1911.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................GCCCGTGACTGTACACAACTTGC....2311.0010100000000
.........................GGATGCCATGGAGAAGACAGAG.......................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
..........GTCCGATCCCAACCTGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................CGCCCGTGACTGTACACAA.........1911.0010100000000
........................................................................................................................................................................................................................................................................................................................................................ATTTGGGGCTGGACTTTGTCTTGCCT....................................................................2611.0010000100000
..................................................GTGAGTG----TTGATGCCAAATGAA-------------------------------------CCCG.................................................................................................................................................................................................................................................................................................................................2611.0010100000000
droPer2
AATATCTCCTGTCCGATCCCAACCTGGATGCCATGGAGAAGACAGAGAAGGTGAGTG----TTGATGCCAAATGAA-------------------------------------CCCGCAAATAAG-------------AGTTC---------------------------------------------------------------------------------------------------------------------------------------------TAATTT--TGGATATACTCGTAGATTGAGCAACTGGATCTCGACGGCTGTCCCATAGCCGATTTGGGGCTCGACTTTGTCTTGCCTGGTCACGCCAACATTGAGCTGTGTCGCGGGGGACGCGACACGCCCGTGACTGTACACAACTTGCGACASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........................................................................................................................................................................................................................................................................................................................AACTGGATCTCGACGGCT..........................................................................................................1814.004400000
........................................................................................................................................................................................................................................................................................................................................................................................................................CACGCCCGTGACTGTACACAACTTGCG...2713.003300000
...........................................................................................................................................................................................................................................................................................................................ACTGGATCTCGACGGCTGT........................................................................................................1913.003300000
..........................................................................................................................................................................................................................................................................................................................AACTGGATCTCGACGGCTGTCCCATAGCC...............................................................................................2913.003300000
.........................................................................................................................................................................................................................................................................................................................................................................................................................ACGCCCGTGACTGTACACAACTTGC....2513.003300000
...........................................................................................................................................................................................................................................................................................................................ACTGGATCTCGACGGCTGTCCC.....................................................................................................2212.002200000
..................................................GTGAGTG----TTGATGCCAAATGAA-------------------------------------C....................................................................................................................................................................................................................................................................................................................................2312.002000002
.........................................................................................................................................................................................................................................................................................................................................................................................................................ACGCCCGTGACTGTACACAACT.......2212.002200000
.........................................................................................................................................................................................................................................................................................................................................................................................................................ACGCCCGTGACTGTACACAACTTGCGACA2912.002200000
..................................................GTGAGTG----TTGATGCCAAATGAA-------------------------------------CC...................................................................................................................................................................................................................................................................................................................................2412.002000002
.................................................................................................................................................................................................................................................................................................................................TCTCGACGGCTGTCCCATAGC................................................................................................2111.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................TTGAGCTGTGTCGCGGGGGA...................................2011.001010000
........................................................................................................................................................................................................................................................................................................................GCAACTGGATCTCGACGGCG..........................................................................................................2011.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................CGCCCGTGACTGTACACAACT.......2111.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................CGCCCGTGACTGTACACAACTTGCGA..2611.001100000
......................................................................................................................................................................................................................................................................................................................GAGCAACTGGATCTCGACGGCT..........................................................................................................2211.001100000
..................................................GTGAGTG----TTGATGCCAAATG............................................................................................................................................................................................................................................................................................................................................................................2011.001000001
.................................................................................................................................................................................................................................................................................................................................................................................................GAGCTGTGTCGCGGGGGAC..................................1911.001000001
.....................................................................................................................................................................................................................................................................................................................................................................CTTTGTCTTGCCTGGTCACGC............................................................2111.001001000
..............................................................................................................................................................................................................................................................................................................................................................................................ATTGAGCTGTGTCGCGGGGGACGC................................2411.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................CGCCAACATTGAGCTGTG.............................................1811.001000001
........................................................................................................................................................................................................................................................................................................................................................................................................................CACGCCCGTGACTGTACAC...........1911.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................CACGCCCGTGACTGTACACAACTTGC....2611.001010000
.......................................................................................................................................................................................................................................................................................................................................................GATTTGGGGCTCGACTTTGTCTTG.......................................................................2411.001010000
...................CAACCTGGATGCCATGGA.................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
droAna3
AGTACATCCTGGCTGATCCAAACATTGATGCCATGGAGAAGACCGAAAAGGTAACA----------CT------ATATAGCT-------TTCCTT------------------------------ATA--TGTAT-TTT-----------------------------------------------------TATACAA----------------------------------------------------A-AA--------------------------------TGTA-TATTCCTCTTATTAGATTGAACAGTTGGACTTGGACGGCTGCCCTATTGCGGATCTGGGCCTTGACTTTGTGCTACCTGGCCATGCCAACATTGAGCTGTGCCGTGGTGGCCGTGATACTCCGGTGACTGTGCACAACTTGCATCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................................................................................................................................................................................................................................................................................................................................................ATGCCAACATTGAGCTGTGCCGTGGT......................................2612.002110000
...........................................................................................................................................................................................................................................................................................................................GTTGGACTTGGACGGCTGCC.......................................................................................................2012.002010001
.........................................................................................................................................................................................................................................................................................................................................................................................CCAACATTGAGCTGTGCCGTGGT......................................2312.002101000
...................................................................................................................................................................................................................................................................................................................ATTGAACAGTTGGACTTGGAC..............................................................................................................2111.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TGATACTCCGGTGACTGTGCAC...........2211.001100000
.........................................................................................................................................................................................................................................................................................................................CAGTTGGACTTGGACGGCT..........................................................................................................1911.001100000
...................AAACATTGATGCCATGGAGAAGACCG.........................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
...............................................................................................................................................................................................................................................................................................................................................................................................TTGAGCTGTGCCGTGGTGGCCGTGATAC...........................2811.001010000
.................................................................................................................................................................................................................................................................................................................................................................TTGACTTTGTGCTACCTGGCC................................................................2111.001010000
..........................................................................................................................................................................................................................................................................................................................................................CTGGGCCTTGACTTTGTGCTACCTGG..................................................................2611.001100000
......................................................................................................................................................................................................................................................................................................................GAACAGTTGGACTTGGACGGCTGCC.......................................................................................................2511.001010000
...............................................................................................................................................................................................................................................................................................................................................CTATTGCGGATCTGGGCCTTGA.................................................................................2211.001100000
........................................................................................................................................................................................................................................................................................................................ACAGTTGGACTTGGACGGCTGCC.......................................................................................................2311.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................CATGCCAACATTGAGCTGTGCCGT.........................................2411.001010000
......................................................................................................................................................................................................................................................................................................................................................................................ATGCCAACATTGAGCTGTGCCGT.........................................2311.001100000
...................................................................................................................................................................................................................................................................................................................................................................GACTTTGTGCTACCTGGCC................................................................1911.001010000
..........................GATGCCATGGAGAAGACCGAAAAG....................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................TTGAGCTGTGCCGTGGTG.....................................1811.001100000
.........................TGATGCCATGGAGAAGACCGAAAAG....................................................................................................................................................................................................................................................................................................................................................................................................2511.001000010
..........................................................................................................................................................................................................................................................................................................................AGTTGGACTTGGACGGCTGCC.......................................................................................................2111.001010000
..........................................................................................................................................................................................................................................................................................................................................................CTGGGCCTTGACTTTGTGCTACCTGGCC................................................................2811.001010000
...........................................................................................................................................................................................................................................................................................................................GTTGGACTTGGACGGCTGCCC......................................................................................................2111.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................AACATTGAGCTGTGCCGTGGT......................................2111.001000010
droBip1
AGTACATCCTGGCAGATCCAAACATTGACGCCATGGAGAAGACCGAAAAGGTAAGATA------ACCT-AA------TTGCC-------TCCCTG----------------------------ATTCA--TGTAT-TTAAC-------------------------------------------------------TAT----------------------------------------------------A-A--------------------------------TTAT--TATTTAATTCCTTAGATTGAACAGTTGGACTTGGACGGCTGCCCTATTGCCGATCTGGGCCTTGACTTTGTGCTACCTGGTCATGCCAACATTGAGTTGTGCCGTGGAGGCCGCGATACTCCAGTGACTGTGCACAACTTGCACCASizeHit CountTotal NormTotal
No Reads
droKik1
AGTATATACTATCCGATCCCAACATTGATGCCATGGAAAAGACTGAAAAGGTGAGTG----CC-----------------------------------------------------------AAA-------------ATTTCAAATCTTTCGG----------------------------------------------------------------------CATATCTCCGACGACATAA-------------------------------------------------ATCATATTTTCCCAGATTGAGCAACTTGATTTGGACAGCTGCCCCATTGCCGATCTGGGACTGGACTTTGTGCTGCCCGGCCATGCCAATATCGAGTTGTGCCGTGGCGGAAGGGACACTCCAGTGACCGTGCACAATCTGCATCASizeHit CountTotal NormTotal
No Reads
droFic1
AATACATTCTCTCCGATCCAAACATCGACGCCATGGAGAAAACAGAGAAAGTAAGTTA------ATCA-AA------ATTCT-------------------------------TACATTGTGAAAACG--TTTGATTTG-----------------------------------------------------TCATTA----------------------------------------------------------ACCAT---------------------------T------TCGTTTTTTCAGATTGAACAACTTGACCTGGATGGCTGCCCCATCGCAGACCTGGGCCTGGACTTCATGCTGCCCGGACATTCCACCATTGAGCTGTGCCGTGGCGGTCGCGATACACCAGTGACCGTGCACAACCTGCACCASizeHit CountTotal NormTotal
No Reads
droEle1
C-----------------------------------------------------------------------------------------TCTCG----------------------------AAATA--TTCCTTTTC-----------------------------------------------------TAATTAA----------------------------------------------------A-AA--------------------------------TGT--TATTTTCTTCTCTAGATCGAACAGCTGGACCTGGATGGTTGTCCCATCGCAGATTTGGGCCTGGATTTCGTGCTGCCCGGACATGCCAACATCGAGTTGTGTCGTGGCGGTCGCGATACACCAGTTACTGTCCACAACCTGCACCASizeHit CountTotal NormTotal
No Reads
droRho1
AAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAC------------------AATTAT--TTTTTCTTTCTCTAGATAGAACAGTTGGACCTGGATGGTTGCCCCATCGCAGACCTGGGCCTGGACTTTGTCCTGCCCGGACATGCCAACATTGAGTTGTGTCGTGGGGGTCGCGATACTCCAGTAACTGTGCACAACCTGCATCASizeHit CountTotal NormTotal
No Reads
droBia1
TAT----TTTGTTAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATTTATAGATTGAACAGCTGGACTTGGATGGCTGCCCTATCTCAGACCTGGGCCTAGACTTCGTATTGCCCGGGCATGCCAACATTGAGTTGTGTCGTGGCGGCCGTGATACGCCTGTGACTGTGCACAACCTCCACCASizeHit CountTotal NormTotal
No Reads
droTak1
AGTACATTCTGACCGACCCAAACATTGATGCCATGGAAAAGACAGAAAAGGTGAGTAA------GTCA------TAACAGA----AAAT------------------------------GTAAAG-------------GTTTTAAATATGTCGGTGTGATTATGAACAAAACGAGA----AATTTACTTCTTAAAT--GTCCATTATAGCATTTAAT----------------------------------A-AAC-T----------------------------CATT--TCTTTGATTTTCTAGATTGAACAGCTGGACTTGGATGGCTGCCCCATCGCAGACTTGGGCCTGGACTTTGTACTGCCCGGACATGCCAACATTGAGTTGTGCCGCGGCGGTCGTGATACACCAGTGACTGTCCACAACCTCCACCASizeHit CountTotal NormTotal
No Reads
droEug1
AGTACATTTTGTCCGATCCAAACATCGATGCCATGGAGAAGACAGAAAAGGTGAGTAATG-CT------AT------ATTCT-------------------------------TAG------------------------TTTTAATTTGTAGATGTC----TGGACAAAATTAGATAGGATTCTTCCTTCCAAAT--GTATAATAT-----CT---TTATCGGCG---ATCCGTTGACATGATTCTAAGA-----------AAACATTGTTGAACTGCTCTGTAATTAA--TTTATAAATTTTCAGATTGAACAGCTGGACCTAGACGGCTGCCCAATTGCAGACCTAGGTCTAGACTTCGTACTGCCCGGACATGCCAACATTGAGTTGTGTCGTGGCGGTCGCGATACACCTGTCACTGTGCACAACCTCCACCASizeHit CountTotal NormTotal
No Reads
dm3
AGTACATTCTATCCGATCCAAACATCGATGCCATGGAAAAGACTGAAAAGGTAAGTTACG-CTTTTACCAAGTAACAAATTAAGT----AT------TTTAAAATCATTTTTGT------------------CCTTTTT-----------------------------------------------------TGATTAGTATTTTATA-CATTTCAT----------------------------------A-AAT-GTACT---------------------------------TATTTTTTTCAGATTGAACAGCTAGACTTGGATGGCTGTCCCATTGCTGACCTAGGCTTGGACTTTGTATTGCCCGGACATGCCAATATAGAGTTGTGTCGGGGCGGTCGCGATACACCTGTCACTGTGCACAACCTTCACCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........................TCGATGCCATGGAAAAGACTGAAAA.....................................................................................................................................................................................................................................................................................................................................................................................................2519.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000001000
.....ATTCTATCCGATCCAAACATCGATGCC......................................................................................................................................................................................................................................................................................................................................................................................................................2719.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................GATTGAACAGCTAGACTTGGATGGC...........................................................................................................2518.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000020000000000000000000100000000000000000000000000000000000000000000000000000000000000000000001000001000
..............................................................................................................................................................................................................................................................................................................................................................................GCCCGGACATGCCAATATAGAGTTGTG.............................................2716.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
................TCCAAACATCGATGCCATGGAAAAGAC...........................................................................................................................................................................................................................................................................................................................................................................................................2716.0060000000000000000000000000000000000000000000000010100000000000000000000000000021000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................ATTGCTGACCTAGGCTTGGACTTTGT...........................................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
....................................................................................................................................................................................................................................................................................................................................................................ACTTTGTATTGCCCGGACATGCCAATA.......................................................2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................ATTGCCCGGACATGCCAAT........................................................1915.0050000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TGTCACTGTGCACAACCTTCACCA2415.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................GCTTGGACTTTGTATTGCCCG...................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................TGTGTCGGGGCGGTCGCGATACACC........................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GATACACCTGTCACTGTGCACAACCTT.....2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................TGGACTTTGTATTGCCCGGA.................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................ACTTTGTATTGCCCGGACATGCCA..........................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................ACTTTGTATTGCCCGGACATGCC...........................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................CTAGACTTGGATGGCTGTCCC.....................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................GCTAGACTTGGATGGCTGTCC......................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000200000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................CCCGGACATGCCAATATAGAGTTGTG.............................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................TAGGCTTGGACTTTGTATT........................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................GATTGAACAGCTAGACTTGGATG.............................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................ACTTGGATGGCTGTCCCAT...................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000002000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GATACACCTGTCACTGTGCACAAC........2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................TGGACTTTGTATTGCCCGGACA...............................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TGCCCGGACATGCCAATATAGAGT.................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................ACTTTGTATTGCCCGGACATGCCAAT........................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................GCTAGACTTGGATGGCTGTCCCATT..................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................TTTGTATTGCCCGGACATGCCAATATA.....................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................TGCTGACCTAGGCTTGGACTTTGT...........................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.....................................................................................................................................................................................................................................................................................................................TGAACAGCTAGACTTGGATGGCTGT........................................................................................................2513.0030000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................TATTGCCCGGACATGCCAATATAGAGT.................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
......................................................................................................................................................................................................................................................................................................................................................................................ATGCCAATATAGAGTTGT..............................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...................................................................................................................................................................................................................................................................................................................................................................................GACATGCCAATATAGAGTTGT..............................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
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droSim2
AGTACATTCTATCCGATCCAAACATCGATGCCATGGAAAAGACTGAAAAGGTAAGTTGGG-CTTTAACCAAATAACAAATTCAAT----AT------CTTGAACTAAGTTTAGT------------------CCTTTTT-----------------------------------------------------TAATTAGTATTTTATA-CATTTCAT----------------------------------A-AAA-TTACC---------------------------------TATTTTTTTCAGATTGAACAGCTAGACTTGGATGGCTGCCCAATTGCTGACCTAGGCTTGGACTTCGTATTGCCCGGACATGCCAATATAGAGTTGTGCCGCGGCGGTCGCGATACACCTGTCACTGTGCACAACCTTCATCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................................................................................................................................................................................................................................................................................................ATTGCTGACCTAGGCTTGGACT...............................................................................2212.00201010000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................ATAGAGTTGTGCCGCGGC......................................1812.00200200000000000000
........................TCGATGCCATGGAAAAGACTGAAA......................................................................................................................................................................................................................................................................................................................................................................................................2412.00200000000110000000
..........................................................................................................................................................................................................................................................................................................................................................CTAGGCTTGGACTTCGTATTGCCC....................................................................2412.00200200000000000000
................................................................................................................................................................................................................................................................................................................................................AATTGCTGACCTAGGCTTGGACTTCGC...........................................................................2711.00101000000000000000
...............................................................................................................................................................................................................................................................................................................................................................CTTGGACTTCGTATTGCC.....................................................................1811.00110000000000000000
......................................................................................................................................................................................................................................................................................................................................................TGACCTAGGCTTGGACTTCGTATTGCCC....................................................................2811.00100100000000000000
................................................................................................................................................................................................................................................................................................................................................AATTGCTGACCTAGGCTTGGACTTCGT...........................................................................2711.00101000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................CGGTCGCGATACACCTGTCACTGTGC.............2611.00100000010000000000
..................................................................................................................................................................................................................................................................................................................GATTGAACAGCTAGACTTGGATGGC...........................................................................................................2511.00100000010000000000
.GTACATTCTATCCGATCCAAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
............................................................................................................................................................................................................................................................................................................................CTAGACTTGGATGGCTGCCC......................................................................................................2011.00101000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................ATTGCCCGGACATGCCAATATAGAGT.................................................2611.00100010000000000000
......................................................................................................................................................................................................................................................................................................................................................................TTCGTATTGCCCGGACATGCCAATA.......................................................2511.00100000001000000000
..............................................................................................................................................................................................................................................................................................................................................................GCTTGGACTTCGTATTGCCC....................................................................2011.00100000010000000000
...................AAACATCGATGCCATGGAAAAGACTGA........................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................GCCGCGGCGGTCGCGATACACCTGTC....................2611.00101000000000000000
......................................................................................................................................................................................................................................................................................................................................................................TTCGTATTGCCCGGACATGCCAATAT......................................................2611.00100000001000000000
.......................ATCGATGCCATGGAAAAGACTGAAAAG....................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
.....................................................................................................................................................................................................................................................................................................................TGAACAGCTAGACTTGGATGGC...........................................................................................................2211.00100000000100000000
..........................................................................................................................................................................................................................................................................................................................................................CTAGGCTTGGACTTCGTATTGCC.....................................................................2311.00101000000000000000
............................................................................................................................................................................................................................................................................................................................CTAGACTTGGATGGCTGCCCA.....................................................................................................2111.00110000000000000000
......................................................................................................................................................................................................................................................................................................................................................................TTCGTATTGCCCGGACATGCCAAT........................................................2411.00100000010000000000
...............................................................................................................................................................................................................................................................................................................................................................................................TAGAGTTGTGCCGCGGCGGTCGCGA..............................2511.00100000001000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................ACACCTGTCACTGTGCACAACC.......2211.00110000000000000000
...............................................................................................................................................................................................................................................................................................................................................................CTTGGACTTCGTATTGCCC....................................................................1911.00101000000000000000
.................................................................................................................................................................................................................................................................................................................................................ATTGCTGACCTAGGCTTGGAC................................................................................2111.00110000000000000000
................................ATGGAAAAGACTGAA.......................................................................................................................................................................................................................................................................................................................................................................................................1511.00100000001000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................CCGCGGCGGTCGCGATACACCTGTC....................2511.00101000000000000000
.......................................................................................................................................................................................................................................................................................................................................................GACCTAGGCTTGGACTTC.............................................................................1811.00101000000000000000
.......................ATCGATGCCATGGAAAAGACTGAAAA.....................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
..........................................................................................................................................................................................................................................................................................................................................................................................CAATATAGAGTTGTGCCGCGGC......................................2211.00101000000000000000
droSec2
AGTACATTCTATCCGATCCAAACATCGATGCCATGGAAAAGACTGAAAAGGTAAGTTGGG-CTTTTACCAAATAACAAATTCAAT----AT------CTTGAATTAAGTTTAGT------------------CCTTTTT-----------------------------------------------------TAATTAGAATTTTATA-CATTTCAT----------------------------------A-AAA-TTTCC---------------------------------TATTTTTTTCAGATTGAACAGCTAGACTTGGATGGCTGCCCAATTGCTGACCTAGGCTTGGACTTCGTATTGCCCGGACATGCCAATATAGAGTTGTGCCGCGGCGGTCGCGATACACCTGTCACTGTGCACAACCTTCATCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................................................................................................................................................................................................................................................................................................................GACCTAGGCTTGGACTTCGTATTGCCC....................................................................2712.0020002
................................................................................................................................................................................................................................................................................................................................................................................................AGAGTTGTGCCGCGGCGGTC..................................2012.0020002
.......................................................................................................................................................................................................................................................................................................................................................................................................TGCCGCGGCGGTCGCGATACACCTG......................2511.0011000
...........................................................................................................................................................................................................................................................................................................................................................................................AATATAGAGTTGTGCCGCGGC......................................2111.0010100
.....................................................................................................................................................................................................................................................................................................................................................CTGACCTAGGCTTGGACTTCGT...........................................................................2211.0010100
.............................................................................................................................................................................................................................................................................................................................................................................TGCCCGGACATGCCAATATAGA...................................................2211.0010100
...........................................................................................................................................................................................................................................................................................................................GCTAGACTTGGATGGCTGCCC......................................................................................................2111.0010010
............................................................................................................................................................................................................................................................................................................................................................................................ATATAGAGTTGTGCCGCGGC......................................2011.0010001
...........................................................................................................................................................................................................................................................................................................................GCTAGACTTGGATGGCTGCCCAAT...................................................................................................2411.0011000
...............................................................................................................................................................................................................................................................................................................................................CAATTGCTGACCTAGGCTTGGA.................................................................................2211.0010010
..........................................................................................................................................................................................................................................................................................................................................................................................CAATATAGAGTTGTGCCGCGGC......................................2211.0010100
.......................................................................................................................................................................................................................................................................................................................................................................................................................ATACACCTGTCACTGTGCAC...........2011.0010010
......................................................................................................................................................................................................................................................................................................................................................................................................GTGCCGCGGCGGTCGCGATACACCTGTCA...................2911.0010100
droYak3
AGTTCATTCTATCCGATCCAAACATCGATGCCATGGAAAAGACTGAAAAGGTAAGTTACT-TTTGTACCAAATAAAAAATACA--------------TTTAAGTTAATTTTAGTCCGT-----------------------------------------------------------------------------------------A-AATTGCGT----------------------------------A-AAT-TTATATATC------------------TATTTT--TATTTTTTTTTTAAGATTGAACAGCTAGACTTGGATGGCTGCCCAATCGCAGACCTAGGCTTGGACTTCGTATTGCCCGGACATGCCAATATAGAGTTGTGTCGAGGAGGTCGTGACACACCTGTTACTGTCCACAACCTTCACCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................ATCGATGCCATGGAAAAGACTG.........................................................................................................................................................................................................................................................................................................................................................................................................2212.00200000020000
...................AAACATCGATGCCATGGAAAAGACT..........................................................................................................................................................................................................................................................................................................................................................................................................2512.00200000020000
...................................................................................................................................................................................................................................................................................................................................................................GACTTCGTATTGCCCGGACATGCC...........................................................2411.00100000010000
................................................................................................................................................................................................................................................................................................................................................................TTGGACTTCGTATTGCCCGGA.................................................................2111.00100100000000
......................................................................................................................................................................................................................................................................................................................................................AGACCTAGGCTTGGACTT..............................................................................1811.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................GTATTGCCCGGACATGCC...........................................................1811.00100100000000
.....................................................................................................................................................................................................................................................................................................................................................................................CATGCCAATATAGAGTTGTGTC...........................................2211.00101000000000
...........................................................................................................................................................................................................................................................................................................................GCTAGACTTGGATGGCTGCCCA.....................................................................................................2211.00100000100000
...........................................................................................................................................................................................................................................................................................................................................................................ATTGCCCGGACATGCCAATATAGAGT.................................................2611.00100000010000
....................AACATCGATGCCATGGAAAAGA............................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
...........................................................................................................................................................................................................................................................................................................................GCTAGACTTGGATGGCTGCC.......................................................................................................2011.00100010000000
.................CCAAACATCGATGCCATGGAAAAGACT..........................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000
....................................................................................................................................................................................................................................................................................................................TTGAACAGCTAGACTTGGAT..............................................................................................................2011.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................CTTGGACTTCGTATTGCCC....................................................................1911.00110000000000
..............................................................................................................................................................................................................................................................................................................................................................................................ATAGAGTTGTGTCGAGGAGGT...................................2111.00100000010000
..................CAAACATCGATGCCATGGAAAAGACT..........................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................................CTTCGTATTGCCCGGACATGC............................................................2111.00110000000000
.................................................................................................................................................................................................................................................................................................................................................................................................GAGTTGTGTCGAGGAGGT...................................1811.00100100000000
...............................................................................................................................................................................................................................................................................................................................................................................................TAGAGTTGTGTCGAGGAGGTC..................................2111.00100100000000
.................................................................................................................................................................................................................................................................................................................................................ATCGCAGACCTAGGCTTGGA.................................................................................2011.00101000000000
.GTTCATTCTATCCGATCCAAACAT.............................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
......................................................................................................................................................................................................................................................................................................................................................AGACCTAGGCTTGGACTTC.............................................................................1911.00100100000000
......................................................................................................................................................................................................................................................................................................................................................................TTCGTATTGCCCGGACATGCC...........................................................2111.00100010000000
..........................................................................................................................................................................................................................................................................................................................................................................................CAATATAGAGTTGTGTCGAGGAGGT...................................2511.00100100000000
...........................................................................................................................................................................................................................................................................................................................................................................................AATATAGAGTTGTGTCGAGGAG.....................................2211.00100000010000
............................................................................................................................................................................................................................................................................................................................CTAGACTTGGATGGCTGCCC......................................................................................................2011.00100010000000
...................................................................................................................................................................................................................................................................................................................................................CGCAGACCTAGGCTTGGACTTCGTAT.........................................................................2611.00101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................GTGTCGAGGAGGTCGTGAC.............................1911.00100001000000
......................................................................................................................................................................................................................................................................................................................................................................................ATGCCAATATAGAGTTGTGTC...........................................2111.00100000010000
.......................ATCGATGCCATGGAAAAGACT..........................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................ATTGCCCGGACATGCCAATATAGAGTTGT..............................................2911.00100000010000
droEre2
ATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTT--TACTTATTTTTTCAGATTGAACAGCTAGACTTAGATGGCTGCCCGATCGCAGACCTGGGCTTGGACTTCGTATTACCCGGACATGCCAATATAGAGTTGTGTCGAGGCGGTCGCGATACACCTGTCACTGTGCACAACCTTCACCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................................................................................................................................................................................................................................................................................................................CTAGACTTAGATGGCTGCCC......................................................................................................2011.0010000100
......................................................................................................................................................................................................................................................................................................................................................AGACCTGGGCTTGGACTTCGT...........................................................................2111.0011000000
.TA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTT--TACTTATTTTTTCAG...................................................................................................................................2111.0011000000
................................................................................................................................................................................................................................................................................................................................................................TTGGACTTCGTATTACCCGGA.................................................................2111.0010000010
.............................................................................................................................................................................................................................................................................................................................................CCCGATCGCAGACCTGGGCTTGGACT...............................................................................2611.0011000000
............................................................................................................................................................................................................................................................................................................................CTAGACTTAGATGGCTGCCCGATCGC................................................................................................2611.0011000000
........................................................................................................................................................................................................................................................................................................................ACAGCTAGACTTAGATGGCTGCCC......................................................................................................2411.0011000000
........................................................................................................................................................................................................................................................................................................................................GGCTGCCCGATCGCAGACCTGGG.......................................................................................2311.0011000000
....................................................................................................................................................................................................................................................................................................................................AGATGGCTGCCCGATCGC................................................................................................1811.0010000010
........................................................................................................................................................................................................................................................................................................................................................................................................GTCGAGGCGGTCGCGATACACCTGTC....................2611.0010100000
..............................................................................................................................................................................................................................................................................................................................................CCGATCGCAGACCTGGGCTTG...................................................................................2111.0010000100
..............................................................................................................................................................................................................................................................................................................................................................................................ATAGAGTTGTGTCGAGGCGGTC..................................2211.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................................ATAGAGTTGTGTCGAGGCGGTCGC................................2411.0010000100
....................................................................................................................................................................................................................................................................................................................TTGAACAGCTAGACTTAGAT..............................................................................................................2011.0010000010
............................................................................................................................................................................................................................................................................................................................................................................................ATATAGAGTTGTGTCGAG........................................1811.0010000100
............................................................................................................................................................................................................................................................................................................................................GCCCGATCGCAGACCTGGGCTTGGACTTC.............................................................................2911.0010100000
.......................................................................................................................................................................................................................................................................................................................................................................................TGCCAATATAGAGTTGTGTCGAGG.......................................2411.0010000010
.................................................................................................................................................................................................................................................................................................................................................................TGGACTTCGTATTACCCGGAC................................................................2111.0011000000
...........................................................................................................................................................................................................................................................................................................................GCTAGACTTAGATGGCTGCCCGATCGC................................................................................................2711.0011000000

Generated: 06/11/2015 at 05:43 PM