ID:

dvi_4252

 Coordinate:

scaffold_12855:6967446-6967596 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-42.8 -42.8 -42.7

Flybase annnotation

exon [dvir_GLEANR_10139:3]; CDS [Dvir\GJ10198-cds]; intron [Dvir\GJ10198-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TCGTGAGAGCGACTGTGCCGACGGCTCGGATGAGGCGCCGAGTCAATGCAGTAAGTATTACCCTTATATTGTATCTGGCGATTGGGTTGCTCATATTTCAGCTTGAATTGTGCAGTCAATTTTTGCACCAGCAACCAGTTTAAGTGCCACAATGGGGAGCAGTGCTTGCCACGCGATTGGATCTGCGATGGCGAACCCGACTGTCGTGATGGTTCCGACGAATTGGAGTGTTGTAAGCGAAAGTTATAGCC
**************************************************(((((((((.((((...(((((....((((.((((((((((.....((((...))))..((((((.......)))))).)))))))....))).)))))))))))))...)))))))))..(((.((((......)))).)))........************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060665
9_females_carcasses_total
 SRR060658
140_ovaries_total
 V053
head
 SRR060664
9_males_carcasses_total
 V047
embryo
 SRR060686
Argx9_0-2h_embryos_total
 M028
head
 SRR060659
Argentina_testes_total
 SRR060666
160_males_carcasses_total
 SRR060668
160x9_males_carcasses_total
 SRR060680
 9xArg_testes_total
 SRR060681
Argx9_testes_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060667
160_females_carcasses_total
 GSM1528803
follicle cells		 SRR060662
9x160_0-2h_embryos_total
 SRR060687
9_0-2h_embryos_total
 SRR1106729
mixed whole adult body
 SRR060655
9x160_testes_total
 SRR060657
140_testes_total
 SRR060684
140x9_0-2h_embryos_total
 V116
male body
......................................................................................................................................................AATGGGGAGCAGTGCTTGCCACGC............................................................................. 24 0 1 4.00 4 2 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................AATGGGGAGCAGTGCTTGCCAC............................................................................... 22 0 1 3.00 3 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...TGAGAGCGACTGTGCCGACGGCT................................................................................................................................................................................................................................. 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....AGAGCGACTGTGCCGACGGCT................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................ACAATGGGGAGCAGTGCTTGC.................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........ACTGTGCCGACGGCTCGGATGAGG........................................................................................................................................................................................................................ 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................GCCGACGGCTCGGATGAGGCGCC.................................................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................AGTCAATCTTTGAATCAGCAAC.................................................................................................................... 22 3 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................CGACGGCTCGGATGAGGCGCC.................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................AATGGGGAGCAGTGCTTGCCACG.............................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......GAGCGACTGTGCCGACGGCT................................................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................TGCCACGCGATTGGATCTG.................................................................. 19 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................GACTGTCGTGATGGTTCCGACGAA............................. 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................AATGGGGAGCAGTGCTTGCCACGCG............................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............GTGCCGACGGCTCGGCTGAGGCGTC.................................................................................................................................................................................................................... 25 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TATTACAGCCTGCATTGTGCAG........................................................................................................................................ 22 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................AATGGGGAGCAGTGCTTGC.................................................................................. 19 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................GACGAATTGGAGTGTTAGA................ 19 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................ATGGGGAGCAGTGCTTGCC................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................ATGGGGAGCAGTGCTTGCCAC............................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................AATTGGAGTGTTCAAAGC............. 18 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................TGGGGAACCCGACTGTC.............................................. 17 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................AATTAGAGTGTTCTAAGC............. 18 2 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................................................................................GCGAATCCGACTGTC.............................................. 15 1 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...........................................................................................................................................................................................AAGGGGAACCTGACTGTC.............................................. 18 3 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0
.............................ATCATGCGCCGAGTCAGTG........................................................................................................................................................................................................... 19 3 15 0.07 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................GATACTGTATCTTGCGATT........................................................................................................................................................................ 19 3 18 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................CGAGTCAATACAGGAAGGATT................................................................................................................................................................................................ 21 3 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................................AATTAGAGTGTTGAAAGC............. 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
............................................................................................................................................................GAGTAGGGCTTGACACGCG............................................................................ 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................GTTTAAGGGTCAGAATGGG............................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
...........................................................................................................................................................................................TTGGTGAACCCTACTGTC.............................................. 18 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................TTTATCCGGCGATGGGGT.................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0

Anti-sense strand reads

AGCACTCTCGCTGACACGGCTGCCGAGCCTACTCCGCGGCTCAGTTACGTCATTCATAATGGGAATATAACATAGACCGCTAACCCAACGAGTATAAAGTCGAACTTAACACGTCAGTTAAAAACGTGGTCGTTGGTCAAATTCACGGTGTTACCCCTCGTCACGAACGGTGCGCTAACCTAGACGCTACCGCTTGGGCTGACAGCACTACCAAGGCTGCTTAACCTCACAACATTCGCTTTCAATATCGG
**************************************************(((((((((.((((...(((((....((((.((((((((((.....((((...))))..((((((.......)))))).)))))))....))).)))))))))))))...)))))))))..(((.((((......)))).)))........************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060684
140x9_0-2h_embryos_total
 V053
head
 V116
male body		 SRR060686
Argx9_0-2h_embryos_total
 SRR060670
9_testes_total
 M028
head
 SRR060662
9x160_0-2h_embryos_total
................................................................................................................................................................................................................................CCACACAACGTTAGCTTTCAA...... 21 3 3 1.00 3 1 0 1 1 0 0 0 0
..............................................................................................................................................................................................................ACTATCAACGCTGCTTCACCTC....................... 22 3 1 1.00 1 0 1 0 0 0 0 0 0
.........................................CAGCTACATCATTCAGAATGG............................................................................................................................................................................................. 21 3 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................CGCTAAACTAGACGCTGCCT........................................................... 20 3 4 0.25 1 0 0 0 0 1 0 0 0
...................CTGCCCAGCCTACCCCTCG..................................................................................................................................................................................................................... 19 3 10 0.20 2 0 0 0 0 0 2 0 0
...................................................................................................................................................................................................................................CACAACGTTAGCTTTCAA...... 18 2 13 0.08 1 0 0 0 0 0 0 1 0
..................................................CATGCAGAATGGGAACATA...................................................................................................................................................................................... 19 3 15 0.07 1 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12855:6967396-6967646 - dvi_4252 TCGTGAGAGCGACTGTGCCGACGGCTCGGATGAGGCGCCGAGTCAATGCAGTAAGTATTACC-CTTA---T--------ATTGTATCTGGCG----------ATTGGGTTGCT----------------------------------------------------------------------------------------------------------------------------------CATATTTCAGCTTGAA-------------------------------TTGTGCAGTCAATTTTTGCACCAGCAACCAGTTTAAGTGCCACAATGGGGAGCAGTGCTTGCCACGCGATTGGATCTGCGATGGCGAACCCGACTGTCGTGATGGTTCCGACGAATTGGAGTGT---TGTAAGCGAA-A-G--T---TATAGCC-----------
droMoj3 scaffold_6540:25648849-25649103 + TCGGGAGAGCGACTGTGCCGATGGCTCGGATGAGGCACCCGGTCTTTGCAGTAAGTATTATG-CTCT---T--------AT-----CTATTG----------TCGT-------------------------------------------------------------------------------------------------------------------------------------------------------GGGA-TTGGGTTGCTCAAATTTCAGCTCGGA--TTGTGCAGTGAACGTGTGCAACCACTTCACCTTCAGATGCCACAATGGGGAGCAGTGCCTGCCGCGCAGTTGGATCTGCGATGGGGACCCCGACTGTCGCGATGGCTCCGACGAATTAGAGTGT---AGTAAGCAGAAAAG--T---TATAGCT-----------
droGri2 scaffold_15074:5835696-5835952 + TCGCGAAAATGACTGTGCCGATGGCTCCGACGAGGCACCAGGGCTTTGCAGTAAGTATTAGC-CAA-----ACG-------------AG---------------------------------CATATATATGA---ACGATATTG--------------------------------------------------------------------------------------------GTTGCTAATATTTCAGCTTAAA-------------------------------TTGTGCAGTGAATGTGTGCAGCAATTTCGGTTTCATGTGCCACAATGGGGAGGGGTGCGTGCCACGCACTTGGATCTGCGATGGCGAACCCGATTGTCGCGATGGCTCCGACGAATTGAAGTGT---TGTAAGCAAACA-G--T---TATAGCA-----------
droWil2 scf2_1100000004943:14502648-14502912 + TCAAGAGGCCGATTGTGCTGATGGCTCTGACGAGACTCCTGAGTTGTGCAGTAAGTAATTAAAACTATT-----A---------------------AGA-----A-----------------AATCTATATGTAACACAATCTCA--------------------------------------------A----------------------CTG------------------TTAACCTGAA-----ATCAATCTTATAA---------------------------------TTAGTGCATTATTGTCAAAATAATGAGGTGAAATGTAAGAATGGCGAGCAATGTATACCAAAATCCTGGATCTGCGATGGTGACTACGACTGTCGCGATAGATCCGATGAATCGGAGTGT---AGTAAGCAACAA-A--T---TTTAATT-----------
dp5 2:23555330-23555618 + TCACGAGGCCGACTGTACCGATGGCTCCGACGAGCTATCCCTCCTCTGCAGTAAGTACTATC-CCC-----AGT-------------CGT-AGATGTA------------------------------------------------GATAACTTTTCC--------------------CCCCA-AGTG-----------------GTG-CCCGAG------------------CTAATG--CAACTATTTCCTTTGAATGTT------------------------GTGTGAGAGCAGTCAGTATGTGCCAGCCCTATGAGGTGATGTGCAAGAACATGGAGCAGTGTATACCACGCATGTGGCTCTGCGATGGCGACTTCGATTGTCGGGACATGTCCGACGAACAGGATTGT---AGTAAGCCTCCA-CCACTCCATCACTC-----------
droPer2 scaffold_3:6327327-6327615 + TCACGAGGCTGACTGTACCGATGGCTCCGACGAGCTATCCCTCCTCTGCAGTAAGTACTATC-CCC-----AGT-------------CGT-AGATGAA------------------------------------------------GATAACTTTTCC--------------------CCCCA-AGTG-----------------GTG-CCCGAG------------------CTAATG--CAACTATTTCCTTTGAATGTT------------------------GTGTGAGAGCAGTCAGTATGTGCCAGCCCTATGAGGTGATGTGCAAGAACATGGAGCAGTGTATACCACGCGGGTGGCTCTGCGATGGCGACTTCGATTGTCGGGACATGTCCGACGAACAGGATTGT---AGTAAGCCTCCA-CCACTCCATCACTC-----------
droAna3 scaffold_13340:11590594-11590885 + TCGGGAGGCCGACTGCGCCGATGCAAGCGACGAAAGTCGCTCTCGTTGTGGTAAGTTTTAAT-CACC---T--------AC-----TTTTAATATAAT------------------------------------------------GATAAATATTTT--------------------TATT--GGAG-----------------AGG-CTTAAA------------------CTAATC--A----ATCTCGCGGATGGGT---------------------------------TTAGGTTTGCAATGCAACAGTAATATGGTAATGTGCAAGAACGGGGAACAATGTGTGCACATGAGCTTCCTTTGCGACGGTGACGACGACTGCCGCGACAAGTCCGACGAAGAGAACTGTGCCAGTAAGCTTAAA-TTACGAAATAACCTCCTCCCATACA
droBip1 scf7180000396691:498144-498402 + TCGGGAGAACGACTGCCCCGATGGAAGCGATGAACTTCTGTCCCGTTGTGGTAAGTTTTAAT-CAGT---T--------AC-----TTGTTATACAAT------------------------------------------------GATAAATATTTC--------------------CT-----GTA-----------------TGG-CAAAAA------------------TTAATA--AAA----TTCGATAATGGGA---------------------------------TTAGGCGGCCAATGCAGCCATGGGCAGACAATGTGTGCAAACGGGGAGCAGTGTGTGCACTTAGCCTTCATTTGCGACGGCGACGAAGACTGTCGTGATAAGTCAGACGAAAAGGATTGTTCCCGTAAGC-------------------------------
droKik1 scf7180000302475:2931572-2931864 + TCAGGAGCACGATTGTTCCGATGGCTCCGACGAAACCCCCGAATTGTGCAGTAAGTACAGCA-----------------AC-----CTGA--------------A-----------------AAGCTCCATGC---AATCTATGGGGATATTCG----TA----------------CACCC-ACGGAG-----------------AGACACAAAG------------------CTAACCG-------TTTCGATTCTGTGT------------------------GTG--CTGTTTAGTGAATGCCTGTCCCAACAATGAGTTCAAATGCCGCAACGTCGAGCAGTGCATTCCGCGGAGCTGGCTCTGCGATGGCAACAACGATTGCCGCGACAAGTCCGATGAGGCGCATTGC---AGTAAGCCAAAA-A--CTACTAAAGCC-----------
droFic1 scf7180000454055:1483502-1483803 - TCAGGAGAGCGATTGTGCCGACGGTTCGGACGAGGCCAACGAATTGTGCAGTAAGTACACAGAACTTGC-----G---------------------GG----GAAAGGGACACTACGTCC---------------------------ACACGGG----GAATCCTTCTG---GGAAATCCT-GTAAG-----AAG--------C--------CAGCAGCAGCAGCAGTTCTCTCTAACCGACGTCTATTTCGATTGTGTGT---------------------------------TTAGTGAACGCCTGTCCCAACAACGAGTTCAAATGCCACACGGTCGACCAGTGCATTCCACGCAGTTGGCTCTGCGATGGCAGCAACGATTGCCGCGACAAATCCGACGAGGCGCACTGC---AGTAAGC-------------------------------
droEle1 scf7180000491261:1178036-1178308 + TCAGGAGAGCGATTGTGCAGATGGCTCCGACGAAGCCAACGAATTGTGCAGTAAGTATTTCA-TCCTCC-----G---------------------GG----AAAGAGGGCATTAAATCC---------------------------ATACG-G----GA----------------ATTCC-GTGAGGAAT-GAA--------C--------CAG------------------CTAACCGACGACTATTTCGATTGTGTGT---------------------------------TTAGTGAACGCCTGTCCCAACAACGAGTTCAAATGCCAAACGGTCGACCAGTGCATTCCGCGTAGTTGGCTCTGCGACGGCAGCAACGATTGCCGCGACAAGTCCGATGAGGCGCACTGC---AGTAAGC-------------------------------
droRho1 scf7180000780007:460275-460547 - TCAGGAGAGCGATTGTTCCGATGGCTCCGACGAAGCCAACGAGTTGTGCAGTAAGTATTTCG-TCGTTC-----G---------------------GG----GAGAAGGGCATTAAATCC---------------------------ATACG-G----GA----------------ATCCC-GTGAGGAAT-GAA--------C--------CAG------------------CTAACCGACGAATATTTCGATTGTGTGT---------------------------------TTAGTGAACGCCTGTCCCAACAACGAGTTCAAATGCCACATGGTCGACCAGTGCATTCCGCGCAGTTGGCTCTGCGATGGCAGCAACGATTGCCGCGACAAGTCCGATGAGGCGCACTGC---AGTAAGC-------------------------------
droBia1 scf7180000302136:2427001-2427272 - TCAGGAGAGCGATTGTGCCGATGGCTCCGACGAGGCCAACGAGCTGTGCAGTAAGTATTACGAACCCCC-----G---------------------GGGGGAAAAGCGGGCTC----CCC---------------------AT----AAGCGGG----GA----------------ATCCC-C-----AAC-GAG--------C--------TAG------------------CTAACCGACGACTATTTCGATTGTGTGT---------------------------------TTAGTGAACGCCTGTCCCAACAACGAGTTCAAATGCCACACGGTCGACCAGTGCATTCCGCGCAGCTGGCTCTGCGATGGCAGCAACGATTGCCGCGACAAGTCCGATGAGGCCCACTGC---AGTAAGC-------------------------------
droTak1 scf7180000415367:875529-875792 + TCAGGAGAGCGATTGTGCCGATGGCTCCGACGAAGCCAACGAGTTGTGCAGTAAGTATTTCG-CCTC-CTCATT-------------TTT-TGAAGGGGGTAAAAGAGGTCA---------------------------------------G-G----GA----------------ATCCC----------------------C--------TAG------------------CTAACCGACGACTATTTCGATTGTGTGT---------------------------------TTAGTGAACGCCTGTCCCAACAACGAGTTCAAATGCCAAACGGTCGACCAGTGCATTCCGCGTAGCTGGCTCTGCGATGGCAGCAACGATTGCCGCGACAAGTCCGATGAGGCTCACTGC---AGTAAGC-------------------------------
droEug1 scf7180000409682:1052841-1053124 + TCAGGAGAGCGATTGTGCCGATGGCTCAGACGAAGCCAACGAGTTGTGCAGTAAGTATTTTG----------------------------------------GAGGAGGGAAT------------------------------GGGGATGTGGG----AT--------GAGAAGAAATCCC-ATAGAGAAT-GAACCTGCAAGC--------CAG------------------CTAACCGACGACTATTTTGATTGTGTGT-----------------------------GTGTTTAGTGAACGCCTGTCCCAACAACGAGTTCAAATGCCAAACGGTCGACCAGTGCATTCCGCGCAGTTGGCTCTGCGACGGCAGCAACGATTGCCGCGACAAGTCCGATGAGGCCCACTGC---AGTAAGCCC-----------------------------
dm3 chr3R:21574729-21575041 - TCAGGAGAGCGATTGTGCCGATGGCTCCGATGAAGCCAACGAATTGTGCAGTAAGTATTGCG-CCGC---T--------AC-----CTGGCG----------ATGAAGTCCTTTGAATCCAC---G--------------TATACGGATACGGG----GA----------------ATCCC-GTGGAGAATTTCG--------CCAGTCATTTAG------------------CTAACCGACGACTATTTCGATTGTGT-------------------------------GTGTTTAGTGAACGCCTGTCCCAACAACGAGTTCAAATGCCAAACGGTCGACCAGTGCATTCCGCGCAGCTGGCTCTGCGATGGCAGCAACGATTGCCGCGACAAGTCCGATGAGGCGCACTGC---AGTAAGCTTAGA-A--C---TAGAACC-----------
droSim2 3r:21079971-21080268 - dsi_13181 TCAGGAGAGCGATTGTGCCGATGGCTCCGATGAAGCCAACGAATTGTGCAGTAAGTATTGCG-CCGC---T--------AC-----CTGGCG----------CTGAAGTCCCTTGAATCCGC---G--------------TATACGGATACGGG----GA----------------ATCCC-GCGGAGAAT-GCG--------CCAGTCATTTAG------------------CTAACCGACGACTATTTCGATTGTGT-------------------------------GTGTTTAGTGAACGCCTGTCCCAACAACGAGTTCAAATGCCAAACGGTCGACCAGTGCATTCCGCGCAGCTGGCTCTGCGATGGCAGCAACGATTGCCGCGACAAGTCCGATGAGGCGCACTGC---AGTAAGC-------------------------------
droSec2 scaffold_13:362518-362829 - TCAGGAGAGCGATTGTGCCGATGGCTCCGATGAAGCCAACGAATTGTGCAGTAAGTATTGCG-CCGC---T--------AC-----CTGGCG----------CTGAAGTCCTTTGAATCCGC---G--------------TGTACGGATACGGG----GA----------------ATCCC-GCGGAGAAT-GCG--------CCAGTCATTTAG------------------CTAACCGACGACTATTTCGATTGTGT-------------------------------GTGTTTAGTGAACGCCTGTCCCAACAACGAGTTCAAATGCCAAACGGTCGACCAGTGCATTCCGCGCAGCTGGCTCTGCGATGGCAGCAACGATTGCCGCGACAAGTCCGATGAGGCGCACTGC---AGTAAGCTCAGA-A--C---TAGAACC-----------
droYak3 3R:24902650-24902951 + TCAGGAGAGCGATTGTGCCGATGGCTCCGATGAAGCCAACGAATTGTGCAGTAAGTATTACC-CAGC---T--GGGTAAAC-----CTGGCG----------GCGAAGTCCTTTGAATCCGC-------------------ATTCGCAAGCGGG----AT----------------ATCCC-GCAGAGAAT-GCA------ATCCAGTCATTTAG------------------CTAACCGACGACTATTTCGATTGTGTGT---------------------------------TTAGTGAACGCCTGTCCCAACAACGAGTTCAAATGCCAAACGGTCGACCAGTGCATTCCGCGCAGCTGGCTCTGCGATGGCAGCAACGATTGCCGCGACAAGTCCGATGAGGCGCACTGC---AGTAAGC-------------------------------
droEre2 scaffold_4820:6473053-6473346 + CCAGGAGAGCGATTGTGCCGATGGCTCCGATGAAGCCAACGAATTGTGCAGTAAGTATTTAG-CCGC---T--------AC-----CCGGCG----------GCGAAGTCCTTTGTATCCGC-------------------ATCCGTATACGGG----CA----------------ATCCC-GCGGAGAAT-GCA--------CCAGTCACTTAG------------------CTAACCGACGACTATTTCGATTGTGTGT---------------------------------TTAGTGAACGCCTGTCCCAACAACGAGTTCAAATGCCAAACGGTCGACCAGTGCATTCCGCGCAGCTGGCTCTGCGATGGCAGCAACGATTGCCGCGACAAGTCCGATGAGGCGAACTGC---AGTAAGC-------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TCGTGAGAGCGACTGTGCCGACGGCTCGGATGAGGCGCCGAGTCAATGCAGTAAGTATTACC-CTTA---T--------ATTGTATCTGGCG----------ATTGGGTTGCT----------------------------------------------------------------------------------------------------------------------------------CATATTTCAGCTTGAA-------------------------------TTGTGCAGTCAATTTTTGCACCAGCAACCAGTTTAAGTGCCACAATGGGGAGCAGTGCTTGCCACGCGATTGGATCTGCGATGGCGAACCCGACTGTCGTGATGGTTCCGACGAATTGGAGTGT---TGTAAGCGAA-A-G--T---TATAGCC-----------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................................................................................................................................................................................................................................................AATGGGGAGCAGTGCTTGCCACGC..................................................................................................2414.004000000000000000200100000000000100000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................AATGGGGAGCAGTGCTTGCCAC....................................................................................................2213.003000000000000001200000000000000000000000000000000000000000000000
...TGAGAGCGACTGTGCCGACGGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000001000000000000000000000000000000000000000000000000000000
.....AGAGCGACTGTGCCGACGGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000100000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................ACAATGGGGAGCAGTGCTTGC.......................................................................................................2111.001000000000000000100000000000000000000000000000000000000000000000
...........ACTGTGCCGACGGCTCGGATGAGG....................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000001000
................GCCGACGGCTCGGATGAGGCGCC................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000001000000000000000000000000000000000000000000000000000000
..................CGACGGCTCGGATGAGGCGCC................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000001000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................AATGGGGAGCAGTGCTTGCCACG...................................................................................................2311.001000000000000000100000000000000000000000000000000000000000000000
......GAGCGACTGTGCCGACGGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000001000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................TGCCACGCGATTGGATCTG.......................................................................................1911.001010000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................GACTGTCGTGATGGTTCCGACGAA..................................................2411.001000000000000000000000000000000010000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................AATGGGGAGCAGTGCTTGCCACGCG.................................................................................................2511.001000000000000000100000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................AATGGGGAGCAGTGCTTGC.......................................................................................................1911.001000000000000000010000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................ATGGGGAGCAGTGCTTGCC......................................................................................................1911.001000000000000000100000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................ATGGGGAGCAGTGCTTGCCAC....................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
droMoj3
TCGGGAGAGCGACTGTGCCGATGGCTCGGATGAGGCACCCGGTCTTTGCAGTAAGTATTATG-CTCT---T--------AT-----CTATTG----------TCGT-------------------------------------------------------------------------------------------------------------------------------------------------------GGGA-TTGGGTTGCTCAAATTTCAGCTCGGA--TTGTGCAGTGAACGTGTGCAACCACTTCACCTTCAGATGCCACAATGGGGAGCAGTGCCTGCCGCGCAGTTGGATCTGCGATGGGGACCCCGACTGTCGCGATGGCTCCGACGAATTAGAGTGT---AGTAAGCAGAAAAG--T---TATAGCT-----------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.....................................................................................................................................................................................................................................................................................TTCAGCTCGGA--TTGTGCAG.............................................................................................................................................................1911.001000001
......................................................................................................................................................................................................................................................................................................................................................................................................GATGGCTCCGACGAATTAGAGTGT---......................................2411.001000001
.........CGACTGTGCCGATGGCTCGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.................................................................................................................................................................................................................................................................................................................................TTCAGATGCCACAATGGGGAGCA...............................................................................................................2311.001000001
..................CGATGGCTCGGATGAGGCACCCGGTCT..........................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
..................CGATGGCTCGGATGAGGCACC................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
........................................................................................................................................................................................................................................................................................................................................GCCACAATGGGGAGCAGTGCCTGCCGC....................................................................................................2711.001000001
......................................................................................................................................................................................................................................................................................................................................................................GTTGGATCTGCGATGGGGACC............................................................................2111.001000001
................................................................................T-----CTATTG----------TCGT-------------------------------------------------------------------------------------------------------------------------------------------------------GGGA-TTGGGTTGCTC......................................................................................................................................................................................2611.001000010
...........................................................................................................................................................................................................................................................................................................................................ACAATGGGGAGCAGTGCCTGCCGCGC..................................................................................................2611.001000001
...........................................................................................................................................................................................................................................................................................................................................ACAATGGGGAGCAGTGCCTGCCGC....................................................................................................2411.001000001
......................................................................................................................................................................................................................................................................................................................................ATGCCACAATGGGGAGCAGTGCCT.........................................................................................................2411.001000001
droGri2
TCGCGAAAATGACTGTGCCGATGGCTCCGACGAGGCACCAGGGCTTTGCAGTAAGTATTAGC-CAA-----ACG-------------AG---------------------------------CATATATATGA---ACGATATTG--------------------------------------------------------------------------------------------GTTGCTAATATTTCAGCTTAAA-------------------------------TTGTGCAGTGAATGTGTGCAGCAATTTCGGTTTCATGTGCCACAATGGGGAGGGGTGCGTGCCACGCACTTGGATCTGCGATGGCGAACCCGATTGTCGCGATGGCTCCGACGAATTGAAGTGT---TGTAAGCAAACA-G--T---TATAGCA-----------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..............................................................................................................................................................................................................................................................................................................................................ATGGGGAGGGGTGCGTGCC......................................................................................................1912.00202
.........................................................................................................................................................................................................................................................................................................................ATTTCGGTTTCATGTGCCACAATG......................................................................................................................2411.00110
.....................................................................................................................................................................................................................................................................................................................................................................................................CGATGGCTCCGACGAATT................................................1811.00110
.............................................................................................................................................................................................................................................................................................................................................................................CTGCGATGGCGAACCCGATT......................................................................2011.00110
..................................................................................................................................................................................................................................................................................................................................................................CGCACTTGGATCTGCGATG..................................................................................1911.00110
......................................................................................................................................................................................................................................................................................................................................................................CTTGGATCTGCGATGGCGAACC...........................................................................2211.00101
............CTGTGCCGATGGCTCCGACGAGG....................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110
.................................................................................................................................................................................................................................................................................................................................................GGGAGGGGTGCGTGCCACG...................................................................................................1911.00110
...........ACTGTGCCGATGGCTCCGACGAGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110
................................................................................................................................................................................................................................................................................................................................................................................CGATGGCGAACCCGATTG.....................................................................1820.50110
droWil2
TCAAGAGGCCGATTGTGCTGATGGCTCTGACGAGACTCCTGAGTTGTGCAGTAAGTAATTAAAACTATT-----A---------------------AGA-----A-----------------AATCTATATGTAACACAATCTCA--------------------------------------------A----------------------CTG------------------TTAACCTGAA-----ATCAATCTTATAA---------------------------------TTAGTGCATTATTGTCAAAATAATGAGGTGAAATGTAAGAATGGCGAGCAATGTATACCAAAATCCTGGATCTGCGATGGTGACTACGACTGTCGCGATAGATCCGATGAATCGGAGTGT---AGTAAGCAACAA-A--T---TTTAATT-----------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................................................................................................................................................................................................................................................................................................................TAATGAGGTGAAATGTAAGAATGGCG...................................................................................................................2611.00100010
........................................................................................................................................................................................................................................................................................................................................................................................ACTACGACTGTCGCGATAG............................................................1911.00101000
.................CTGATGGCTCTGACGAGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
.....................................................................................................................................................................................................................................................................................................................CAAAATAATGAGGTGAAATG..............................................................................................................................2011.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................GACTACGACTGTCGCGATA.............................................................1911.00101000
....GAGGCCGATTGTGCTGATGGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
..AAGAGGCCGATTGTGCTGATGGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
..............................................................................................................................................................................................................................................................................................................................................................................................ACTGTCGCGATAGATCCG.......................................................1811.00110000
...................................................................................................................................................................................................................................................................................................................................................................................................CGCGATAGATCCGATGAATCG...............................................2111.00100010
........................................................................................................................................................................................................................................................................................................................................GTAAGAATGGCGAGCAATGTATACC......................................................................................................2511.00110000
...........................................................................................................................................................................................................................................................................................................................................................................................ACGACTGTCGCGATAGATCCGAT.....................................................2311.00110000
.............................................................................................................................................................................................................................................................................................................................................................................................GACTGTCGCGATAGATCCGA......................................................2011.00100010
...............................................................................................................................................................................................................................................................................................................TATTGTCAAAATAATGAGGT....................................................................................................................................2011.00100010
..........GATTGTGCTGATGGCTCTGACGAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110000
................GCTGATGGCTCTGACGAGACT..................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
.................................................................................................................................................................................................................................................................................................................................GTGAAATGTAAGAATGGCG...................................................................................................................1911.00100010
.......................................TGAGTTGTGCAGTAAGTAATTAA.........................................................................................................................................................................................................................................................................................................................................................................................................2311.00100001
...................GATGGCTCTGACGAGACTCCT...............................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000
....GAGGCCGATTGTGCTGATGGCTC............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................GACTACGACTGTCGCGATAG............................................................2011.00100100
...................................................................................................................................................................................................................................................................................................................................................................................................CGCGATAGATCCGATGAATC................................................2011.00100010
......................................................................................................................................................................................................................................................................................................................................................................................TGACTACGACTGTCGCGATAGATC.........................................................2411.00100010
.............................................................................................................................................................................................................................................................................................................................TGAGGTGAAATGTAAGAATGGCGAGC................................................................................................................2611.00100100
dp5
TCACGAGGCCGACTGTACCGATGGCTCCGACGAGCTATCCCTCCTCTGCAGTAAGTACTATC-CCC-----AGT-------------CGT-AGATGTA------------------------------------------------GATAACTTTTCC--------------------CCCCA-AGTG-----------------GTG-CCCGAG------------------CTAATG--CAACTATTTCCTTTGAATGTT------------------------GTGTGAGAGCAGTCAGTATGTGCCAGCCCTATGAGGTGATGTGCAAGAACATGGAGCAGTGTATACCACGCATGTGGCTCTGCGATGGCGACTTCGATTGTCGGGACATGTCCGACGAACAGGATTGT---AGTAAGCCTCCA-CCACTCCATCACTC-----------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................GGCTCCGACGAGCTATCCCTCCTCTGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................GGACATGTCCGACGAACAGG..............................................2011.0010100000000
droPer2
TCACGAGGCTGACTGTACCGATGGCTCCGACGAGCTATCCCTCCTCTGCAGTAAGTACTATC-CCC-----AGT-------------CGT-AGATGAA------------------------------------------------GATAACTTTTCC--------------------CCCCA-AGTG-----------------GTG-CCCGAG------------------CTAATG--CAACTATTTCCTTTGAATGTT------------------------GTGTGAGAGCAGTCAGTATGTGCCAGCCCTATGAGGTGATGTGCAAGAACATGGAGCAGTGTATACCACGCGGGTGGCTCTGCGATGGCGACTTCGATTGTCGGGACATGTCCGACGAACAGGATTGT---AGTAAGCCTCCA-CCACTCCATCACTC-----------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............................................................................................................................................................................................................................................................................................................................................................................................................TCCGACGAACAGGATTGT---A.....................................1911.001000001
......................................................................................................................................................................................................................................................................................................................................GTGCAAGAACATGGAGCAGT.............................................................................................................2011.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................TTCGATTGTCGGGACATGTCC........................................................2111.001000001
.........TGACTGTACCGATGGCTCCGACGAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.....................................................................................................................................................................................................................................................................................................................................................................GGGTGGCTCTGCGATGGCG...............................................................................1911.001000001
droAna3
TCGGGAGGCCGACTGCGCCGATGCAAGCGACGAAAGTCGCTCTCGTTGTGGTAAGTTTTAAT-CACC---T--------AC-----TTTTAATATAAT------------------------------------------------GATAAATATTTT--------------------TATT--GGAG-----------------AGG-CTTAAA------------------CTAATC--A----ATCTCGCGGATGGGT---------------------------------TTAGGTTTGCAATGCAACAGTAATATGGTAATGTGCAAGAACGGGGAACAATGTGTGCACATGAGCTTCCTTTGCGACGGTGACGACGACTGCCGCGACAAGTCCGACGAAGAGAACTGTGCCAGTAAGCTTAAA-TTACGAAATAACCTCCTCCCATACASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................GATGCAAGCGACGAAAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002011000
..........GACTGCGCCGATGCAAGCGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
..........................GCGACGAAAGTCGCTCTCGTTGTGGT...................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
.............................ACGAAAGTCGCTCTCGTTGTGGT...................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
droBip1
TCGGGAGAACGACTGCCCCGATGGAAGCGATGAACTTCTGTCCCGTTGTGGTAAGTTTTAAT-CAGT---T--------AC-----TTGTTATACAAT------------------------------------------------GATAAATATTTC--------------------CT-----GTA-----------------TGG-CAAAAA------------------TTAATA--AAA----TTCGATAATGGGA---------------------------------TTAGGCGGCCAATGCAGCCATGGGCAGACAATGTGTGCAAACGGGGAGCAGTGTGTGCACTTAGCCTTCATTTGCGACGGCGACGAAGACTGTCGTGATAAGTCAGACGAAAAGGATTGTTCCCGTAAGC-------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TCAGGAGCACGATTGTTCCGATGGCTCCGACGAAACCCCCGAATTGTGCAGTAAGTACAGCA-----------------AC-----CTGA--------------A-----------------AAGCTCCATGC---AATCTATGGGGATATTCG----TA----------------CACCC-ACGGAG-----------------AGACACAAAG------------------CTAACCG-------TTTCGATTCTGTGT------------------------GTG--CTGTTTAGTGAATGCCTGTCCCAACAATGAGTTCAAATGCCGCAACGTCGAGCAGTGCATTCCGCGGAGCTGGCTCTGCGATGGCAACAACGATTGCCGCGACAAGTCCGATGAGGCGCATTGC---AGTAAGCCAAAA-A--CTACTAAAGCC-----------SizeHit CountTotal NormTotal
No Reads
droFic1
TCAGGAGAGCGATTGTGCCGACGGTTCGGACGAGGCCAACGAATTGTGCAGTAAGTACACAGAACTTGC-----G---------------------GG----GAAAGGGACACTACGTCC---------------------------ACACGGG----GAATCCTTCTG---GGAAATCCT-GTAAG-----AAG--------C--------CAGCAGCAGCAGCAGTTCTCTCTAACCGACGTCTATTTCGATTGTGTGT---------------------------------TTAGTGAACGCCTGTCCCAACAACGAGTTCAAATGCCACACGGTCGACCAGTGCATTCCACGCAGTTGGCTCTGCGATGGCAGCAACGATTGCCGCGACAAATCCGACGAGGCGCACTGC---AGTAAGC-------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TCAGGAGAGCGATTGTGCAGATGGCTCCGACGAAGCCAACGAATTGTGCAGTAAGTATTTCA-TCCTCC-----G---------------------GG----AAAGAGGGCATTAAATCC---------------------------ATACG-G----GA----------------ATTCC-GTGAGGAAT-GAA--------C--------CAG------------------CTAACCGACGACTATTTCGATTGTGTGT---------------------------------TTAGTGAACGCCTGTCCCAACAACGAGTTCAAATGCCAAACGGTCGACCAGTGCATTCCGCGTAGTTGGCTCTGCGACGGCAGCAACGATTGCCGCGACAAGTCCGATGAGGCGCACTGC---AGTAAGC-------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TCAGGAGAGCGATTGTTCCGATGGCTCCGACGAAGCCAACGAGTTGTGCAGTAAGTATTTCG-TCGTTC-----G---------------------GG----GAGAAGGGCATTAAATCC---------------------------ATACG-G----GA----------------ATCCC-GTGAGGAAT-GAA--------C--------CAG------------------CTAACCGACGAATATTTCGATTGTGTGT---------------------------------TTAGTGAACGCCTGTCCCAACAACGAGTTCAAATGCCACATGGTCGACCAGTGCATTCCGCGCAGTTGGCTCTGCGATGGCAGCAACGATTGCCGCGACAAGTCCGATGAGGCGCACTGC---AGTAAGC-------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
TCAGGAGAGCGATTGTGCCGATGGCTCCGACGAGGCCAACGAGCTGTGCAGTAAGTATTACGAACCCCC-----G---------------------GGGGGAAAAGCGGGCTC----CCC---------------------AT----AAGCGGG----GA----------------ATCCC-C-----AAC-GAG--------C--------TAG------------------CTAACCGACGACTATTTCGATTGTGTGT---------------------------------TTAGTGAACGCCTGTCCCAACAACGAGTTCAAATGCCACACGGTCGACCAGTGCATTCCGCGCAGCTGGCTCTGCGATGGCAGCAACGATTGCCGCGACAAGTCCGATGAGGCCCACTGC---AGTAAGC-------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TCAGGAGAGCGATTGTGCCGATGGCTCCGACGAAGCCAACGAGTTGTGCAGTAAGTATTTCG-CCTC-CTCATT-------------TTT-TGAAGGGGGTAAAAGAGGTCA---------------------------------------G-G----GA----------------ATCCC----------------------C--------TAG------------------CTAACCGACGACTATTTCGATTGTGTGT---------------------------------TTAGTGAACGCCTGTCCCAACAACGAGTTCAAATGCCAAACGGTCGACCAGTGCATTCCGCGTAGCTGGCTCTGCGATGGCAGCAACGATTGCCGCGACAAGTCCGATGAGGCTCACTGC---AGTAAGC-------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
TCAGGAGAGCGATTGTGCCGATGGCTCAGACGAAGCCAACGAGTTGTGCAGTAAGTATTTTG----------------------------------------GAGGAGGGAAT------------------------------GGGGATGTGGG----AT--------GAGAAGAAATCCC-ATAGAGAAT-GAACCTGCAAGC--------CAG------------------CTAACCGACGACTATTTTGATTGTGTGT-----------------------------GTGTTTAGTGAACGCCTGTCCCAACAACGAGTTCAAATGCCAAACGGTCGACCAGTGCATTCCGCGCAGTTGGCTCTGCGACGGCAGCAACGATTGCCGCGACAAGTCCGATGAGGCCCACTGC---AGTAAGCCC-----------------------------SizeHit CountTotal NormTotal
No Reads
dm3
TCAGGAGAGCGATTGTGCCGATGGCTCCGATGAAGCCAACGAATTGTGCAGTAAGTATTGCG-CCGC---T--------AC-----CTGGCG----------ATGAAGTCCTTTGAATCCAC---G--------------TATACGGATACGGG----GA----------------ATCCC-GTGGAGAATTTCG--------CCAGTCATTTAG------------------CTAACCGACGACTATTTCGATTGTGT-------------------------------GTGTTTAGTGAACGCCTGTCCCAACAACGAGTTCAAATGCCAAACGGTCGACCAGTGCATTCCGCGCAGCTGGCTCTGCGATGGCAGCAACGATTGCCGCGACAAGTCCGATGAGGCGCACTGC---AGTAAGCTTAGA-A--C---TAGAACC-----------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
TCAGGAGAGCGATTGTGCCGATGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2518.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................................................................................................................................................................................................................................ATGCCAAACGGTCGAC.................................................................................................................1616.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006
....GAGAGCGATTGTGCCGATGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000
TCAGGAGAGCGATTGTGCCGATG................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................AGCAACGATTGCCGCGACAAGTCC........................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................TCAAATGCCAAACGGTCGACCAGT.............................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000
....................................................................................................................................................................................................................................................CTATTTCGATTGTGT-------------------------------GTGTTTAGA............................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
.......................................................................................................................................................................................................................................................TTTCGATTGTGT-------------------------------GTGTTTAG.............................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
TCAGGAGAGCGATTGTGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.........................TCCGATGAAGCCAACGAATTGTGCAG....................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................GCGACAAGTCCGATGAGGC................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGCGCACTGC---AGTAAGCTTAGA-A--C---..................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................GCAACGATTGCCGCGACAA............................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................CGCGACAAGTCCGATGAGGCGCACT...........................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................GTTCAAATGCCAAACGGTCGACCA...............................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GAGAGCGATTGTGCCGATGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.....AGAGCGATTGTGCCGATGGCTCCGAT........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................................................................TCGACCAGTGCATTCCGCGCAGCTGGC...........................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................TCCGATGAGGCGCACTGC---AGTAAGCTTA............................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..AGGAGAGCGATTGTGCCGATGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.......................................................................................................................................................................................................................................................................................................................................................AGTGCATTCCGCGCAGCTGG............................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................ACGAGTTCAAATGCCAAACGGTC....................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................TGGCG----------ATGAAGTCCTTTGAATCCAC---..........................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................TTCCGCGCAGCTGGCTCTGCGATGGC................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TGTGCCGATGGCTCCGATGAAGCCAACGA.............................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................AATGCCAAACGGTCGACCAGTGCAT.........................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................TTCGATTGTGT-------------------------------GTGTTTAG.............................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................CAAACGGTCGACCAGTGCAT.........................................................................................................2011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................CAAATGCCAAACGGTCGACCAGTGCAT.........................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................CAAGTCCGATGAGGCGCACTGC---......................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................TTCG--------CCAGTCATTTAG------------------CTACT.........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................CCGCGCAGCTGGCTCTGCGATGGC................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................TCAAATGCCAAACGGTCGACCAGTGC...........................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GGAGAGCGATTGTGCCGATGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........GATTGTGCCGATGGCTCCGAT........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTAAGTATTGCG-CCGC---T--------AC-----C................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
................................................................................................................................................................................................................................................................................................................................................................CGCGCAGCTGGCTCTGCGATGGCAGCA............................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................CGCGACAAGTCCGATGAGGCG...............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
...............................................................................................................................................................................................................................................................................................................GCCTGTCCCAACAACGAGTTCAAATGC.............................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................AAATGCCAAACGGTCGACCAGTGC...........................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
............................................................................................................................................................................................................................................................................................................................................................................TCTGCGATGGCAGCAACGATTGCCGC.................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CAGGAGAGCGATTGTGCCGATGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................ACGCCTGTCCCAACAACGAGT.....................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...........................................................................................................................................................................................................................................................................................................GAACGCCTGTCCCAACAACGA.......................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................GATGGCAGCAACGATTGC....................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................TACGGATACGGG----GA----------------ATCT...................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.CAGGAGAGCGATTGTGCCGATGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.......................................................................................................................................................................................................................................................................................................................................TGCCAAACGGTCGACCAGTGCA..........................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......AGCGATTGTGCCGATGGCTCCGATGAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................GTCCCAACAACGAGTTCAAATGCCA...........................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................ATCCC-GTGGAGAATTTCG--------CCAGTC......................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
....................................................................................................................................................................................................................................................................................................................................................................CAGCTGGCTCTGCGATGGCAATC............................................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TCAGGAGAGCGATTGTGCCGATGGCTCCGATGAAGCCAACGAATTGTGCAGTAAGTATTGCG-CCGC---T--------AC-----CTGGCG----------CTGAAGTCCCTTGAATCCGC---G--------------TATACGGATACGGG----GA----------------ATCCC-GCGGAGAAT-GCG--------CCAGTCATTTAG------------------CTAACCGACGACTATTTCGATTGTGT-------------------------------GTGTTTAGTGAACGCCTGTCCCAACAACGAGTTCAAATGCCAAACGGTCGACCAGTGCATTCCGCGCAGCTGGCTCTGCGATGGCAGCAACGATTGCCGCGACAAGTCCGATGAGGCGCACTGC---AGTAAGC-------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................................................................................................................................................................................................................................................................GTTCAAATGCCAAACGGTC....................................................................................................................1913.00303000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................GCAACGATTGCCGCGACAAGTCC........................................................2312.00202000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................AACGATTGCCGCGACAAGTCC........................................................2112.00202000000000000000
......................................................GTATTGCG-CCGC---T--------AG-----A................................................................................................................................................................................................................................................................................................................................................................................16201.1523000000101570000000
TCAGGAGAGCGATTGTGCCGATGGCTCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000001000000
.............................................................................................................................................................................................................................................................................................................................CGAGTTCAAATGCCAAACGGTCGACC................................................................................................................2611.00101000000000000000
.............................................................................................................................................................................................................................................................................................................................................................TTCCGCGCAGCTGGCTCTGCGATGGCA...............................................................................2711.00100010000000000000
.............................................................................................................................................................................................................................................................................................................ACGCCTGTCCCAACAACGAGTTCAAAT...............................................................................................................................2711.00100010000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................AGCAACGATTGCCGCGACAAGT..........................................................2211.00101000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................GCTCTGCGATGGCAGCAACGATTGCCGC.................................................................2811.00100010000000000000
....GAGAGCGATTGTGCCGATGGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................GATTGCCGCGACAAGTCCG.......................................................1911.00101000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................AGCAACGATTGCCGCGACAAGTCC........................................................2411.00101000000000000000
.........................................................................................................................................................................................................................................................................................................................................CCAAACGGTCGACCAGTGC...........................................................................................................1911.00100010000000000000
.....................................................................................................................................................................................................................................................................................................................................................................AGCTGGCTCTGCGATGGC................................................................................1811.00100010000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................CGCGACAAGTCCGATGAGGCGC..............................................2211.00100010000000000000
...................................................................................................................................................................................................................................................................................................................................CAAATGCCAAACGGTCGACCAGTG............................................................................................................2411.00100010000000000000
.............................................................................................................................................................................................................................................................................................................................................................................CTGCGATGGCAGCAACGATTGCCG..................................................................2411.00100010000000000000
...............................................................................................................................................................................................................................................................................................................................................GGTCGACCAGTGCATTCCGCGCA.................................................................................................2311.00100010000000000000
.CAGGAGAGCGATTGTGCCGATGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................AGCAACGATTGCCGCGACAAGTCCGATG....................................................2811.00101000000000000000
................................................................................................................................................................................................................................................................................................................................................GTCGACCAGTGCATTCCGCGC..................................................................................................2111.00101000000000000000
..................................................................................................................................................................................................................................................................................................................................................................CGCAGCTGGCTCTGCGATGGCA...............................................................................2211.00100010000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................AGCAACGATTGCCGCGACAA............................................................2011.00100010000000000000
.....AGAGCGATTGTGCCGATG................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010000000000000
..................................................................................................................................................................................................................................................................................................................................TCAAATGCCAAACGGTCGACCAGT.............................................................................................................2411.00100010000000000000
........................................................................................................................................................................................................................................................................................................................................GCCAAACGGTCGACCAGTG............................................................................................................1911.00100010000000000000
..........................................................................................................................................................................................................................................................................................................................................CAAACGGTCGACCAGTGC...........................................................................................................1811.00100010000000000000
............................................................................................................................................................................................................................................................................................................................................................ATTCCGCGCAGCTGGCTC.........................................................................................1811.00101000000000000000
........................................................................................................................................................................................................................................................................................................................AACAACGAGTTCAAATGCCAAACGGTC....................................................................................................................2711.00100010000000000000
droSec2
TCAGGAGAGCGATTGTGCCGATGGCTCCGATGAAGCCAACGAATTGTGCAGTAAGTATTGCG-CCGC---T--------AC-----CTGGCG----------CTGAAGTCCTTTGAATCCGC---G--------------TGTACGGATACGGG----GA----------------ATCCC-GCGGAGAAT-GCG--------CCAGTCATTTAG------------------CTAACCGACGACTATTTCGATTGTGT-------------------------------GTGTTTAGTGAACGCCTGTCCCAACAACGAGTTCAAATGCCAAACGGTCGACCAGTGCATTCCGCGCAGCTGGCTCTGCGATGGCAGCAACGATTGCCGCGACAAGTCCGATGAGGCGCACTGC---AGTAAGCTCAGA-A--C---TAGAACC-----------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................................................................................................................................................................................................................................................................................................................AAATGCCAAACGGTCGACCAGT.............................................................................................................2212.0020200
....................................................................................................................................................................................................................................................................................................................................................................................................GCGACAAGTCCGATGAGGCGCACT...........................................2411.0010010
..AGGAGAGCGATTGTGCCGATG................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
..........................................................................................................................................................................................................................................................................................................................................................................................................AGTCCGATGAGGCGCACTGC---......................................2011.0010010
.......................................................................................................................................................................................................................................................................................................................................TGCCAAACGGTCGACCAGTG............................................................................................................2011.0010010
........................................................................................................................................................................................................................................................................................................................................GCCAAACGGTCGACCAGTGCA..........................................................................................................2111.0010100
...........................................................................................................................................................................................................................................................................................................................................................................................................GTCCGATGAGGCGCACTG..........................................1811.0010010
droYak3
TCAGGAGAGCGATTGTGCCGATGGCTCCGATGAAGCCAACGAATTGTGCAGTAAGTATTACC-CAGC---T--GGGTAAAC-----CTGGCG----------GCGAAGTCCTTTGAATCCGC-------------------ATTCGCAAGCGGG----AT----------------ATCCC-GCAGAGAAT-GCA------ATCCAGTCATTTAG------------------CTAACCGACGACTATTTCGATTGTGTGT---------------------------------TTAGTGAACGCCTGTCCCAACAACGAGTTCAAATGCCAAACGGTCGACCAGTGCATTCCGCGCAGCTGGCTCTGCGATGGCAGCAACGATTGCCGCGACAAGTCCGATGAGGCGCACTGC---AGTAAGC-------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................GCATTCCGCGCAGCTGGCTCTGC......................................................................................2317.00707000000000
.....................................................................................................................................................................................................................................................................................................................................AATGCCAAACGGTCGACCAGT.............................................................................................................2115.00500000050000
......................................................................................................................................................................................................................................................................................................................................................................................................GACAAGTCCGATGAGGCGCACTGC---......................................2414.00401010020000
.......................................................................................................................................................................................................................................................................................................................................................................................AGCAACGATTGCCGCGACAAGTCC........................................................2414.00421000010000
.CAGGAGAGCGATTGTGCCGATGGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2514.00401000030000
...................................................................................................................................................................................................................................................................................................................................CAAATGCCAAACGGTCGACCAGT.............................................................................................................2314.00400000040000
..................................................................................................................................................................................................................................................................................................................................TCAAATGCCAAACGGTCGACCAGT.............................................................................................................2413.00301000020000
......GAGCGATTGTGCCGATGGCTCCGATGAAGCC..................................................................................................................................................................................................................................................................................................................................................................................................................................3113.00300000000003
.......................................................................................................................................................................................................................................................................................................................................................AGTGCATTCCGCGCAGCTGGCTCTGC......................................................................................2612.00202000000000
...............................................................................................................................................................................................................................................................................................................GCCTGTCCCAACAACGAGTT....................................................................................................................................2012.00201000010000
.................................................................................................................................................................................................................................................................................................................................................................................GATGGCAGCAACGATTGCCGC.................................................................2112.00202000000000
................................................................................................................................................................................................................................................................................................................................GTTCAAATGCCAAACGGTCGACCAGT.............................................................................................................2612.00200000020000
...................................................................................................................................................................................................................................................................................................................................CAAATGCCAAACGGTCGACCAGTG............................................................................................................2412.00200000020000
..................................................................................................................................................................................................................................................................................................................................TCAAATGCCAAACGGTCGACC................................................................................................................2112.00202000000000
..............................................................................................................................................................................................................................................................................................................CGCCTGTCCCAACAACGAGTT....................................................................................................................................2112.00202000000000
.......................................................................................................................................................................................................................................................................................................................................TGCCAAACGGTCGACCAGTGCATTCCG.....................................................................................................2712.00200000020000
...........................................................................................................................................................................................................................................................................................................GAACGCCTGTCCCAACAACGAGT.....................................................................................................................................2312.00202000000000
......................................................................................................................................................................................................................................................................................................................................................................................................GACAAGTCCGATGAGGCGCA.............................................2012.00201000010000
......................................................................................................................................................................................................................................................ATTTCGATTGTGTGT---------------------------------TTAGT............................................................................................................................................................2011.00100000010000
...........................................................................................................................................................................................................................................................................................................GAACGCCTGTCCCAACAACGAGTT....................................................................................................................................2411.00101000000000
..............................................................................................................................................................................................................................................................................................................CGCCTGTCCCAACAACGAGTTCAAATGCC............................................................................................................................2911.00100000010000
...........................................................................................................................................................................................................................................................................................................................................AAACGGTCGACCAGTGCATTCCGC....................................................................................................2411.00100000010000
..............................................................................................................................................................................................................................................................................................................CGCCTGTCCCAACAACGAGTTCAAAT...............................................................................................................................2611.00101000000000
.....................................................................................................................................................................................................................................................................................................................................................................AGCTGGCTCTGCGATGGC................................................................................1811.00101000000000
.................................................................................................................................................................................................................................................................................................................................................................................GATGGCAGCAACGATTGCCGCGA...............................................................2311.00101000000000
..........................................................................................................................................................................................................................................................................................................................................CAAACGGTCGACCAGTGCATTCCGCGC..................................................................................................2711.00100000010000
................................................................................................................................................................................................................................................................................................................................GTTCAAATGCCAAACGGTCGACCA...............................................................................................................2411.00101000000000
...GGAGAGCGATTGTGCCGATGGCTCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
...........................................................................................................................................................................................................................................................................................................................................AAACGGTCGACCAGTGCATT........................................................................................................2011.00100000010000
.................................................................................................................................................................................................................................................................................................................CTGTCCCAACAACGAGTTCAAATGCC............................................................................................................................2611.00100000010000
........GCGATTGTGCCGATGGCTCCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................CGACAAGTCCGATGAGGCGCACTGC---AACC..................................2911.00100000010000
............................................................................................................................................................................................................................................................................................................................................AACGGTCGACCAGTGCATTCC......................................................................................................2111.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................................................GCGACAAGTCCGATGAGGCGCACTG..........................................2511.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................GACAAGTCCGATGAGGCGCACTGC---A.....................................2511.00100000010000
.............................................................................................................................................................................................................................................................................................................................CGAGTTCAAATGCCAAACG.......................................................................................................................1911.00101000000000
.....AGAGCGATTGTGCCGATGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
...............................................................................................................................................................................................................................................................................................................GCCTGTCCCAACAACGAGT.....................................................................................................................................1911.00101000000000
.................................................................................................................................................................................................................................................................................................................................TTCAAATGCCAAACGGTCGACCAGT.............................................................................................................2511.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................................................GCGACAAGTCCGATGAGGCGCACT...........................................2411.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................................CTGGCTCTGCGATGGCAGCAACG.........................................................................2311.00101000000000
..................................................................................................................................................................................................................................................................................................................................TCAAATGCCAAACGGTCGACCAGTGCA..........................................................................................................2711.00101000000000
..........................................................................................................................................................................................................................................................................................................................CAACGAGTTCAAATGCCAAACGGT.....................................................................................................................2411.00100000010000
...............................................................................................................................................................................................................................................................................................................................................GGTCGACCAGTGCATTCCGCGC..................................................................................................2211.00101000000000
......................................................................................................................................................................................................................................................ATTTCGATTGTGTGT---------------------------------TTAGTGAAC........................................................................................................................................................2411.00100000010000
...........................................................................................................................................................................................................................................................................................................................................AAACGGTCGACCAGTGCATTCCGCGC..................................................................................................2611.00100000010000
...................................................................................................................................................................................................................................................................................................................................CAAATGCCAAACGGTCGACCAG..............................................................................................................2211.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................................GGCAGCAACGATTGCCGCGACAA............................................................2311.00101000000000
..............................................................................................................................................................................................................................................................................................................CGCCTGTCCCAACAACGA.......................................................................................................................................1811.00101000000000
........................CTCCGATGAAGCCAACGAATT..........................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
............TTGTGCCGATGGCTCCGATGAAGCC..................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................................TGCCGCGACAAGTCCGATGAGG.................................................2211.00101000000000
....................................................................................................................................................................................................................................................................................................................................AAATGCCAAACGGTCGACCAGT.............................................................................................................2211.00100000010000
TCAGGAGAGCGATTGTGCCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.CAGGAGAGCGATTGTGCCGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.........................TCCGATGAAGCCAACGAATTGTGCAT....................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
........................................................................................................................................................................................................................................................................................................................................................................................GCAACGATTGCCGCGACAA............................................................1911.00110000000000
.....................................................................................................................................................................................................................................................................................................................................................CCAGTGCATTCCGCGCAGCTGGCTCTGC......................................................................................2811.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................CAGCTGGCTCTGCGATGGC................................................................................1911.00101000000000
........................................................................................................................................................................................................................................................................................................................................................................................GCAACGATTGCCGCGACAAGT..........................................................2111.00100000010000
.................CCGATGGCTCCGATGAAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
.................................................................................................................................................................................................................................................................................................................CTGTCCCAACAACGAGTT....................................................................................................................................1811.00101000000000
..........GATTGTGCCGATGGCTCCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
............................................................................................................................................................................................................................................................................................................................................AACGGTCGACCAGTGCATTCCGCGC..................................................................................................2511.00101000000000
....GAGAGCGATTGTGCCGATG................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
.CAGGAGAGCGATTGTGCCGATGGCTCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
................................................................................................................................................................................................................................................................................................................................GTTCAAATGCCAAACGGTCGACC................................................................................................................2311.00100000010000
....GAGAGCGATTGTGCCGATGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
......................................................................................................................................................................................................................................................................................................................................................CAGTGCATTCCGCGCAGCTGGCTCTGC......................................................................................2711.00101000000000
........................................................................................................................................................................................................................................................................................................................................GCCAAACGGTCGACCAGTGCATTCCGC....................................................................................................2711.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................CATTCCGCGCAGCTGGCTCTGC......................................................................................2211.00101000000000
............................................................................................................................................................................................................................................................................................................................................................ATTCCGCGCAGCTGGCTCTGCGATGGC................................................................................2711.00101000000000
...........................................................................GTAAAC-----CTGGCG----------GCGAAGT..........................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................GCTGGCTCTGCGATGGCAG..............................................................................1911.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................................GCGATGGCAGCAACGATTGCCGCGACA.............................................................2711.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................CAGCTGGCTCTGCGATGGCAGCAAC..........................................................................2511.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................................................AGCAACGATTGCCGCGACAAGTC.........................................................2311.00101000000000
............................................................................................................................................................................................................................................................................................................AACGCCTGTCCCAACAACGAGTTCA..................................................................................................................................2511.00101000000000
........................................................................................................................................................................................................................................................................................................................................................GTGCATTCCGCGCAGCTGGCTCTGC......................................................................................2511.00101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................GACAAGTCCGATGAGGCGCACT...........................................2211.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................TTGCCGCGACAAGTCCGATGAGGCG...............................................2511.00100000010000
droEre2
CCAGGAGAGCGATTGTGCCGATGGCTCCGATGAAGCCAACGAATTGTGCAGTAAGTATTTAG-CCGC---T--------AC-----CCGGCG----------GCGAAGTCCTTTGTATCCGC-------------------ATCCGTATACGGG----CA----------------ATCCC-GCGGAGAAT-GCA--------CCAGTCACTTAG------------------CTAACCGACGACTATTTCGATTGTGTGT---------------------------------TTAGTGAACGCCTGTCCCAACAACGAGTTCAAATGCCAAACGGTCGACCAGTGCATTCCGCGCAGCTGGCTCTGCGATGGCAGCAACGATTGCCGCGACAAGTCCGATGAGGCGAACTGC---AGTAAGC-------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................GACAAGTCCGATGAGGCGAACTGC---......................................2412.0021010000
........................CTCCGATGAAGCCAACGAAT...........................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000020
...................................................................................................................................................................................................................................................................................................................................................................................................CGCGACAAGTCCGATGAGGCGAACTGC---......................................2712.0021000100
...................................................................................................................................................................................................................................................................................................................................................................................................CGCGACAAGTCCGATGAGGC................................................2012.0020100010
........................................................................................................................................................................................................................................................................................................................................GCCAAACGGTCGACCAGTGCA..........................................................................................................2112.0020100100
...................................................................................................................................................................................................................................................................................................................................CAAATGCCAAACGGTCGACC................................................................................................................2011.0010000010
................................................................................................................................................................................................................................................................................................................................................................................................TGCCGCGACAAGTCCGATGAGGCGAACT...........................................2811.0011000000
......................................................................................................................................................................................................................................................................................................................................ATGCCAAACGGTCGACCAGT.............................................................................................................2011.0010001000
............................................................................................................................................................................................................................................................................................................AACGCCTGTCCCAACAACGAGT.....................................................................................................................................2211.0010000100
...........................................................................................................................................................................................................................................................................................................................................................................................ACGATTGCCGCGACAAGTCC........................................................2011.0010000100
.......................................................................................................................................................................................................................................................................................................................................................................CTGGCTCTGCGATGGCAGCAACGATT......................................................................2611.0010000010
..............................................................................................................................................................................................................................................CGACGACTATTTCGATTGTGTGT---------------------------------TTAG.............................................................................................................................................................2711.0011000000
........................CTCCGATGAAGCCAACGAATTGTGCAT....................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
...........................................................................................................................................................................................................................................................................................................................................AAACGGTCGACCAGTGCATT........................................................................................................2011.0010000100
....GAGAGCGATTGTGCCGATGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
.....................................................................................................................................................................................................................................................................................................................................................................................................CGACAAGTCCGATGAGGC................................................1811.0010000010
..................................................................................................................................................................................................................................................................................................................................................CGACCAGTGCATTCCGCG...................................................................................................1811.0011000000
............................................................................................................................................................................................................................................................................................................................................................ATTCCGCGCAGCTGGCTCTGCGATGGCA...............................................................................2811.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................................ATTGCCGCGACAAGTCCGAT.....................................................2011.0010000010
...........................................................................................................................................................................................................................................................................................................................................................................................................GTCCGATGAGGCGAACTGC---......................................1911.0010000010
...................................................................................................................................................................................................................................................ACTATTTCGATTGTGTGT---------------------------------TTAG.............................................................................................................................................................2211.0011000000
................................................................................................................................................................................................................................................................................................................................................................................................TGCCGCGACAAGTCCGATGAGGC................................................2311.0010000010
......................................................................................................................................................................................................................................................................................................................................................................GCTGGCTCTGCGATGGCA...............................................................................1811.0011000000
.....................................................................................................................................................................................................................................................TATTTCGATTGTGTGT---------------------------------TTAG.............................................................................................................................................................2011.0010000100
..........................................................................................................................................................................................................................................................................................................................................................................................................AGTCCGATGAGGCGAACTGC---......................................2011.0010000100
............................................................................................................................................................................................................................................................................................................................................AACGGTCGACCAGTGCATTCC......................................................................................................2111.0010000010
....................................................................................................................................................................................................................................................................................................................................................................................................GCGACAAGTCCGATGAGGCG...............................................2011.0010001000
........................CTCCGATGAAGCCAACGAATTGTGC......................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000010

Generated: 05/16/2015 at 08:41 PM