ID:

dvi_4251

 Coordinate:

scaffold_12855:6961450-6961600 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-23.7 -23.0 -22.7

Flybase annnotation

exon [dvir_GLEANR_10139:4]; CDS [Dvir\GJ10198-cds]; intron [Dvir\GJ10198-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GTGTGATCAGAACAAAGATTGCAGCGATGGCAGCGATGAGGCCACGTGCAGTAAGCCATATTTCGCAAATTTCTAATCTTAAGCTGTAACTGTTTGTAAGCTGTAACTAAAACTCTAGTTGTTGTAGTGTGCTTAGTTGTGTGTGTACATACTTCAGCTTGCTGGAGATAAGTATGCTACACTTTGCTACAAGAATTGTGCAATACTTACCTAAACAATACACATGCAATAAAGCACAAATATTTACACAC
*************************************************************************************************.((..((.(((....(((((((.((((..((((((.((......)).))))))....))))..)))))))...)))..))....))******************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060663
160_0-2h_embryos_total
 SRR060667
160_females_carcasses_total
 M047
female body
 M061
embryo
 V053
head
 M028
head
 SRR060658
140_ovaries_total
 SRR060660
Argentina_ovaries_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060664
9_males_carcasses_total
 SRR060665
9_females_carcasses_total
 SRR060676
9xArg_ovaries_total
 SRR060678
9x140_testes_total
 SRR060681
Argx9_testes_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
 M027
male body		 SRR060679
140x9_testes_total
 SRR060682
9x140_0-2h_embryos_total
................................GCGATGAGGCCACGTGCAA........................................................................................................................................................................................................ 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................TTGCAGCGATGGCAGCGATGAGGCCA............................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................AGCTTGCTGGAGATAAGTATGCTACACT.................................................................... 28 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................CTTGATGGAGAGAAGTATGCTG........................................................................ 22 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......CAGAACAAAGATTGCAGCGATGG............................................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................AAGCTGTAACTAAAACTCT....................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................TTGCTACAAGAATTGTGC.................................................. 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................GATTGCAGCGATGGCAGCGATG..................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
......................................................................................................GTAACTAAAACTCTAGTTGTTGT.............................................................................................................................. 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TAAAACTCTAGTTGTTGTAGTGTGC....................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........AACAAAGATTGCAGCGAT............................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................GGCAGCGATGAGGCCACGTGCA......................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...............................................................................................................................TGTGCTTAGTTGTGTGTGTACATACT.................................................................................................. 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................ACACTTTGCTACAAGAATTGTGCA................................................. 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................CAGCGATGAGGCCACGTGCA......................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
........................CGATGGCAGCGATGAGGCC................................................................................................................................................................................................................ 19 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.....ATCAGAACAAAGATTGCAGCGAT............................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
....GATCAGAACAAAGATTGCAGC.................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.....ATCAGAACAAAGATTGCAGCGATG.............................................................................................................................................................................................................................. 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................GCTTGCTGGAGATAAGTATGCTACAC..................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................AGCTTGCTGGAGATAAGTAT............................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.........GAACAAAGATTGCAGCGATGG............................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................AATTCCTAATCTTGAGCTG..................................................................................................................................................................... 19 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
....................ACAGCGATGGCAGCGATGA.................................................................................................................................................................................................................... 19 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.........................................................................................................................TGGCAGTGTGCTTAGTTGCGTG............................................................................................................ 22 3 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................TGGCAGTGTGGTTAGTTGTGTG............................................................................................................ 22 3 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................TGGCAGTGTGGTTAGTTGTGT............................................................................................................. 21 3 10 0.10 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................CGGATTGTAGGCTGTAACT............................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

CACACTAGTCTTGTTTCTAACGTCGCTACCGTCGCTACTCCGGTGCACGTCATTCGGTATAAAGCGTTTAAAGATTAGAATTCGACATTGACAAACATTCGACATTGATTTTGAGATCAACAACATCACACGAATCAACACACACATGTATGAAGTCGAACGACCTCTATTCATACGATGTGAAACGATGTTCTTAACACGTTATGAATGGATTTGTTATGTGTACGTTATTTCGTGTTTATAAATGTGTG
********************************************************************.((..((.(((....(((((((.((((..((((((.((......)).))))))....))))..)))))))...)))..))....))************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 V053
head
....................................................................TAAAGATTCGAATTTGTCATT.................................................................................................................................................................. 21 3 13 0.08 1 1 0
.......................CGCTACCGTTGCTACTGCGC................................................................................................................................................................................................................ 20 3 20 0.05 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12855:6961400-6961650 - dvi_4251 GTGTGATCAGAACAAAGATTGCAGCGATGGCAGCGATGAGGCCACGTGCAGTAAGCCATAT---T-TC--GCAA--------ATTTCTAATCTTAAG-----CT-----GTAAC--------------------TGT---TT-----------GTAAG--CT---GTAACTA------A-----------------------AACTCT----------------AGTTGTTGT----AGTGTG--CT---------TAGT---------------------------------------------------------------TGTGTG--TGTACATACTTCAGC------------------------------------------------------------------------TTGCTGGAGATAAGTA-TGC----TACA--CTTT------GCTACA-AGAATTGTGC--AAT-----ACTTACCT-AAACAATACAC-------ATGCAATAAAG-CACAAATATTTACA----CAC
droMoj3 scaffold_6540:25653582-25653864 + dmo_2060 GTGCGATCAGAGCAAAGATTGCAGCGATGGCAGCGACGAGGCCACTTGTAGTAAGCCAGACTTAA-AG--AAAT--------GTTTCCAAACCTA------ACT---GTGCT-----T----------------TGC---TT-GT-------AC--------ACTGTAACTA------A-----------------------AGCTTT----------------AGCTGTAAT----AGTGTGTGCT--------CTAGTGCTCTCTCT---CTGAGTA-----------------TGTG----T-G-----C-------GTGTGTGTT--TGTACATACTTCATC------------------------------------------------------------------------TTGTTGCCCATAAGTA-TGA----TACA--CATT------GCTGCA-AGTATTGTGT--AAT-----ACTTACCT-AAACAATACAC-------TTGCAATAGAG-CACAAATATTTACA----CAC
droGri2 scaffold_15074:5840821-5841121 + GTGTGATCAGAGCAAAGATTGCAGCGATGGCTCCGATGAGGCCACGTGCAGTAAGCCAT----CA-AA--TTTT--------AATCTCTA------TTTTAACT-------------------------------------------------------------GTAACTA------AAGCCCTGTCGGCAGTAGTATCGTAATTCTCTTATGTATTTAGTTTAGCTG------------------------------------CTCT---CTGTGTA-----------TTTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCA-----------------GTTAGTGTGCGACA-CA-----------C-------------------T---------------TAAT---------TTTGCTGGCCATAAGTG-TGC----TACA--CATT------GCTGCA-AGAATTGTGT--ATT-----ACTTACCT-AAACAATACTC-------ATGCAATAAAG-CACAAATATTTACA----CAC
droWil2 scf2_1100000004943:14507152-14507418 + GTGTGATCAGAATAAAGATTGCAGTGATGGCAGCGATGAGGCCATGTGTAGTAAGCAAA----AA-AA--AAAAATTGAAATTCTTTAGAAATTCTTTAAATCT-----GTG-----T----------------TGT---AT-GG-------TGTTGG--ATATACTTATTA------T-----------------------ACTTTT----------------ATA----------TTTTGTATATTTATTGCTTATGTGTACCTAC----------------TTAT-GTTGGTGTGTG----T-A-----T-------GTTTA------CCAA----------------------------------------------------------------------------------------------------------ACTTA--TGTT------TTTATG-TGCCTCATAT--CCT-----GGTTCCCT-GCTAA--GTAG-------ACACAATACTA-CATATACATACATA----CAT
dp5 2:23559486-23559736 + dps_748 GTGCGATCAAAACAAGGACTGCGACGATGGCAGCGATGAGGCCCAGTGCAGTAAGCCTT----CAATC--------------ATATCTAAG-TTTCTGTTTGCT-----GCAACTCTT----------------TGTT--TT-GG-------TGTTGG--TGA--------------------------------------AATCTAT-------------------------CTATCGTTCTC----------------------------------------------------------------------------------------------------------TATC---------------------------------TGCCTTTCCTGCTACGTTATA----------------------TCTGTTGA----CACA--CATTTGTATTTCTCTG-AAAGTTGTGT--AATTCCACACTTACCT-ACTAC--TCGTATATCC-TACCAATAAAG-CACAAATATTTACG----CAG
droPer2 scaffold_3:6331498-6331738 + GTGCGATCAAAACAAGGACTGCGACGATG-CAGCGATGAGC--CAGTGCAGTAGCTCAT----CA-T---------------AT---CTAGCTC--TGTT-GCT-----GCA-CT--C----------------T---TGTT-AG-------TGT-------------------------------------------GTGAATCTAT-------------------------CTATCGTTGC-----------------------------------------------------------------------------------------------------------TATC---------------------------------TGCCT-GCCTGCTACGT-ATATACATGTAT--CC---------TCTG-TGA----CACA--CATT-GTAT-TCTCTG-A-AGTTGTGT--ACTTCCACACT-ACCT-ACTAC--TCGTATATCCTACCCAATAAAGCCACAAATATTTACGCA--GAC
droAna3 scaffold_13340:11593787-11594055 + GTGCGATCAGCACAGCGACTGTCGGGACGGAAGCGACGAGGCCCAGTGCAGTAAGCCCC----TA------------------------------------TCT-----GCT-----T----------------TGTTTGTT-GG-------TGTTGG--CTATCT---------------------------------------------------------------------TCTGTTGCATAT------------------A-CC---CCGCTTTTACCCTCTA-CTTGGTGTCGG----T-T-----G-------CTATAT------CTA-------TAACACGCTATCCTATACTTTATGTCC-------------------C------------------------------AGCTGCACTTGAGAG-TGCCAAGCACA--CATT------TCCCAG-GAAATTGTGT--AAT-----GCCCTGCTTAAAGA--TTGT-------ACGTTATAAAG-CACAAATATTTGCTAA--CAC
droBip1 scf7180000396691:501294-501566 + GTGCGATCAGCACAGTGACTGCCGGGACGGAAGCGACGAGGCCCAGTGCAGTAAGCCAT----TA-TC--T--------------------------------------GAT----------------------TGTTTGTT-GGTGT------TTGG--CTA---------------TG---------------------------------------------------------TCTTGAATAT------------------A-CC---CCGCTTTTACCCTGTA-CTTGGTGTCGG----T-T-----G-------CAATATCTATATCTA-------TATCACACTATCCTATGCTTTATAACA-------------------C------------------------------AGCTGCACTTGAGAG-TTCCAAGCACA--CATT------TTCCAG-GAAATTGTGT--AAT-----GCCCTGCTTAAAGA--TTGT-------ATGCTATAAGG-CACAAATATTTGCGAA-ACTC
droKik1 scf7180000301923:358193-358467 - GTGCGATCAGAACAAAGATTGTCGCGACGGAAGCGATGAGGCCCAGTGCAGTAAGCCAA----AA-CC--AAAT--------CAATGCTAGCTTTCTA---TCT-----GTT-----CTGTACTTATTCCTCTGCGC---TT-GG-------TGTTGG--CTGCTT---T------AAC---------------------------------------------------------------------------------------------CTGCT---------------------------------------------CTAT------ATATATACTGT----TACTATCCCA-----------CTTTACTTTCTCCTCTTCTTACCC-AGCTCTTGAGT-ATAT----------------------------ACACACACA--TATT------TCTGTG-GAAATTGTGT--AAT-----GCCATGCT-TAAAC--TCGC-------ATGCAATAAAG-CACAAATATTTACA----CAA
droFic1 scf7180000454055:1454079-1454368 - GTGCGATCAGACCAAAGATTGCCGCGACGGAAGCGATGAGGCCCAGTGCAGTAAGCCAT----AA-CC--GATT--------ATTTCCTAGCCT-CTTTTAC--------------------------------TGC---TT-GG-------TGTTGG--TTGCTT---T------AATAA-----------------CGGAATTTTA-----------------------------TTTGGATTTT------------------T-CC---CCTTTTA-------TG-CTTGGTGTTGG----T-T-----G-------CTTTTTGTT--CCCGTAGACTGTAGTGTATTTTT-----------------------------------------------------------------CCCTGCACTTAAGTG-TGCCATGAACA--CATT------TCCCTG-AAACTTGTGTGTGATGCTATGCTATGCT-AAAAC--TCGC-------ATGCAATAAAG-CACAAATATTTACG----CAC
droEle1 scf7180000491261:1210512-1210798 + GTGCGATCAGAACAAAGATTGCCGCGATGGAAGCGATGAGGCCCAGTGCAGTAAGCCAA----AA-TC--GAAT--------ATTCCTTAGACTTTT---CTCT-----GTT-T--TT----------------TGC---TT-GG-------TGTTGG--CTGCTT---T------AATAT-----------------ACGCAATTAT-----------------------------CTTAGATT-T------------------T-CA---CTGCCTT-------TG-CTTGGTGTTGG----T-T-----G-------CTATTTATT--TCTAGATGCTGTACCGAACTATT------------------------------------------------------------------CCTGCACTTGACTG-TGCCATGCACA--CATT------TCTCGA-AGAATTGTGT--AAT-----GCCATGTT-AAAAC--TCGT-------ATGCAATAAAG-CACAAATATTTACG----CAT
droRho1 scf7180000780007:426609-426887 - GTGCGATCAACACAAAGATTGCCATGATGGAAGTGATGAGGCTCAGTGCAGTAAGCCAT----AA-CC--GAAT--------ATTCCTAAGTCCTTTTCT-CTT-----G-T-T--TT----------------TGC---TT-GG-------TGTTGG--CTGCTA---T------AATAA-----------------CCGTAATTTA-----------------------------TTTCGATT-T------------------T-CC---CTGCTTT-------TG-CTTGGTGTTGG----T-T-----G-------CAATTTATT--TCTATATATTATATTGTAGAATT-----------------------------------------------------------------CCCTACACTTGACTT-TACTATGCACA--CATT------TCTCTG-AGCATTGTG-----------------CT-AAAAC--TCGT-------ATGCAATAAAC-CACAAATATTAACG----CAC
droBia1 scf7180000302136:2393287-2393553 - GTGTGACCAGAACAAGGATTGTCGCGACGGAAGCGATGAGGCCCAGTGCAGTAAGCCAT----AA-CC--GAAT--------ATTTCCTAGCTTTCT-------------------------------------------TT-GG-------TGCTGG--TTGCCA---T------AATAA-----------------CCGAATTTAT-----------------------------CCTTGATTTT------------------T-CT---CTGCCCT-------TC-CTTGGTGTTGG----TTT-----G-------CTATTTATC--C--------------GTATTTAT-----------------------------------------------------------------CCCTGCACTCGACTG-TGCCAAGCACA--CATT------TCCCCG-AGTCTAGTGT--AAT-----GCCATGCT-TAAGC--CAGT-------ATGCAATAGAG-CACAAATATTTGCGAAAACAC
droTak1 scf7180000415367:911027-911311 + GTGCGATCAGACCAAGGATTGTCGCGATGGCAGCGACGAGGCCCAGTGCAGTAAGCCAT----GA-CCATGAAT--------ATTTCCC--------------------GCT-----T----------------TGCTTTTT-GGTGCTTGGTTCTGG--TTGCAA---T---AATAGCAA-----------------CCGAATTTAT-----------------------------CTTTGATTTT------------------T-CC---TTGCTTT-------TA-TTTGGTGTTGG----C-T-----G-------CTATTTATA--CCCGAATGCTTTAGTGAACTACT--------------C-------------------C------------------------------CCCTGCACTTGAATG-TGCCATGCACACTCAGT------TCTCTG-AGA-----------T-----GCTTTGCT-AAAAC--TATT-------ATGCAATAGAG-CACAAATATTTACG----AAC
droEug1 scf7180000409682:1084122-1084422 + GTGCGATCAGAGCAAGGATTGTCGCGATGGAAGCGATGAGGCGATGTGCAGTAAGCCAA----AAACC--GAAT----AT--ATTTCTTAGCTTGCTTTTGC-------ACT-----T----------------TGC---TTACG-------TGTTGG--TTGCAA---T------AATAA-----------------CCGAATTTAT-----------------------------CTTAGATTTT------------------TTCA---CTGCTTT-------TGTTTTGGTGTTGG----TTT-----G-------GTATTTTTT--CCTATATGCTATAGTGTACTACA-CA-----------C-------------------C------------------------------CCCTGCACTCGACTG-TGTCATGCACA--CATT------TCCCGA-AGACTTGTGTGTAAT-----GCCATGCT-GAAAC--TCGT-------ATGCAATAAAG-CTCAAATATTTACG----CAC
dm3 chr3R:21535501-21535796 - GTGCGATCAGAACAAAGATTGTCGCGATGGAAGCGATGAGGCGCAGTGCAGTAAGCCAT----AA-CC--GAAT--------ATTTCCTAGCTCTCTGTTACCTGCTTTGCT-----T----------------TGC---TT-GG-------TGTTGG--TTGCCG---T------AATAA-----------------TTGAAATTAT-----------------------------CGTAGATTTT------------------T-CC---CTGCTTT-------CC-TTTGGTGTTGG----T-T-----G------CTTATTTATT--TCTAGATACTGTAGTGCACTATT-----------------------------------------------------------------CCCCGTACTTGACTG-TGCCATGAACA--CATG------TCCCTG-AGACTTGTGT--TGT-----GACATCGT-GAAGC--TCGT-------ATGCAATAATG-TACAAATATTTACG----CAC
droSim2 3r:21050021-21050310 - dsi_10885 GTGCGATCAGAACAAAGATTGTCGCGATGGAAGCGATGAGGCGCAGTGCAGTAAGCCAT----AA-AC--GAAT--------ATTTACTAGCTTTCTGTTACCT-----GCT-----T----------------TGC---TT-GG-------TGTTGG--TTGCCG---C------AATAA-----------------CTGAAATTAT-----------------------------CGTAGATTTT------------------T-TA---CTGCTTC-------CC-TTTGGTGTTGG----T-T-----G-------CTATTTATT--CTTAGATACTGTAGTGCACTATT-----------------------------------------------------------------CCCTGCACTTGACTG-TGCCATGAACA--CATG------TCCCTG-CGACTTGTGT--TGT-----GCCATGGT-GAAGC--TCGT-------ATGCAATAATG-TACAAATATTTACG----CAC
droSec2 scaffold_13:332767-333056 - GTGCGATCAGAACAAAGATTGTCGCGATGGAAGCGATGAGGCGCAGTGCAGTAAGCCAT----AA-CC--GAAT--------ATTTACTAGCTTTCTGTTACCT-----GCT-----T----------------TGC---TT-GG-------TGTTGG--TGGCCG---T------AATAA-----------------CTGAAATTAT-----------------------------CGTTGATTTT------------------T-TA---CTGCTTC-------CC-TTTGGTGTTGG----T-T-----G-------CTATTTATT--CTTAGATACTGTAGTGCACTATT-----------------------------------------------------------------CCCTGCACTTGACTG-TGCCCTGAACA--CATG------TCCCTG-CGACTTGTGT--TGT-----GCCATGGT-GAAGC--TCGT-------ATGCAATAATG-TACAAATATTTACG----CAC
droYak3 3R:24933652-24933961 + GTGCGATCAGAACAAGGATTGTCGCGATGGCAGCGATGAGGCGCAGTGCAGTAAGCCAT----AA-AC--GAAT--------ATTTCCTAGCTACCGCTTACCT-ATTTGCT-----T----------------TGC---TT-GG-------TGTTGGTGTTGCTT---TTAGAGTAATAA-----------------CCGAAATAAT-----------------------------CGTAGATTTC------------------T-TCTTTCTGCTTC-----TCTT-TTTGGTGTTGG----T-T-----G-------ATATTTATA--TCTAGATGCTATAGTGCACTATT-----------------------------------------------------------------CGCTGCACTTGACTG-TGCCATGAACACACATG------TCCCTGAAGACTTGTGT--TGT-----GCCATGGT-GAAGC--TCGT-------ATGCAATAATG-TACAAATATTTACG----CAC
droEre2 scaffold_4820:6502817-6503099 + GTGCGATCAGGCCAAAGATTGTCGCGATGGAAGCGATGAGGCGCAGTGCAGTAAGCCAA----AA-CC--AAAT--------ATTTCTTAGCTCTCCCTAGCCT-----GCT-----T----------------TGC---TT-GG-------TGTTGG--ATA--A---T------AATAA-----------------CTGAAATTAT-----------------------------TGTAGAACTT------------------T-CC---CTGCT-------------TTGGTGTTGG----T-T-----G-------CTATTTATA--TCTAGATACTACAATGCACTTTT-----------------------------------------------------------------CCCTGCACTTGAATG-TGCCATGAGCA--CATG------TCCCTG-AGACTTGTGT--TGT-----GTCCTGGC-GAAGC--TCGT-------ATGCAATAATG-CACAAATATTTACG----CAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
GTGTGATCAGAACAAAGATTGCAGCGATGGCAGCGATGAGGCCACGTGCAGTAAGCCATAT---T-TC--GCAA--------ATTTCTAATCTTAAG-----CT-----GTAAC--------------------TGT---TT-----------GTAAG--CT---GTAACTA------A-----------------------AACTCT----------------AGTTGTTGT----AGTGTG--CT---------TAGT---------------------------------------------------------------TGTGTG--TGTACATACTTCAGC------------------------------------------------------------------------TTGCTGGAGATAAGTA-TGC----TACA--CTTT------GCTACA-AGAATTGTGC--AAT-----ACTTACCT-AAACAATACAC-------ATGCAATAAAG-CACAAATATTTACA----CACSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................GCGATGAGGCCACGTGCAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000010000000000000000000000000000000000000000000000000
..................TTGCAGCGATGGCAGCGATGAGGCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................AGC------------------------------------------------------------------------TTGCTGGAGATAAGTA-TGC----TACA--CT...............................................................................................2811.001000000000000000100000000000000000000000000000000000000000000000
.......CAGAACAAAGATTGCAGCGATGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000010000000000000000000000000000000000000000000000000
...........................................................................................................................................................AAG--CT---GTAACTA------A-----------------------AACTCT----------------.................................................................................................................................................................................................................................................................................................................................1911.001010000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT------GCTACA-AGAATTGTGC--....................................................................1811.001000000000000000001000000000000000000000000000000000000000000000
................GATTGCAGCGATGGCAGCGATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................GTAACTA------A-----------------------AACTCT----------------AGTTGTTGT----....................................................................................................................................................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................................................TA------A-----------------------AACTCT----------------AGTTGTTGT----AGTGTG--C...........................................................................................................................................................................................................................................................................................................2511.001000000001000000000000000000000000000000000000000000000000000000
..........AACAAAGATTGCAGCGAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000010000000000000000000000000000000000000000000000000
............................GGCAGCGATGAGGCCACGTGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................TGTG--CT---------TAGT---------------------------------------------------------------TGTGTG--TGTACATACT............................................................................................................................................................................................................2611.001000000000000000000000000001000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA--CTTT------GCTACA-AGAATTGTGC--A...................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
..............................CAGCGATGAGGCCACGTGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000010000000000000000000000000000000
........................CGATGGCAGCGATGAGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000010000000000000000000000000000000000000000000000000000
.....ATCAGAACAAAGATTGCAGCGAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000001000000000000000000000000000000000000000000000000000
....GATCAGAACAAAGATTGCAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
.....ATCAGAACAAAGATTGCAGCGATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................GC------------------------------------------------------------------------TTGCTGGAGATAAGTA-TGC----TACA--C................................................................................................2611.001000000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................AGC------------------------------------------------------------------------TTGCTGGAGATAAGTA-T.............................................................................................................2011.001000000000000000000000000000010000000000000000000000000000000000
.........GAACAAAGATTGCAGCGATGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
GTGCGATCAGAGCAAAGATTGCAGCGATGGCAGCGACGAGGCCACTTGTAGTAAGCCAGACTTAA-AG--AAAT--------GTTTCCAAACCTA------ACT---GTGCT-----T----------------TGC---TT-GT-------AC--------ACTGTAACTA------A-----------------------AGCTTT----------------AGCTGTAAT----AGTGTGTGCT--------CTAGTGCTCTCTCT---CTGAGTA-----------------TGTG----T-G-----C-------GTGTGTGTT--TGTACATACTTCATC------------------------------------------------------------------------TTGTTGCCCATAAGTA-TGA----TACA--CATT------GCTGCA-AGTATTGTGT--AAT-----ACTTACCT-AAACAATACAC-------TTGCAATAGAG-CACAAATATTTACA----CACSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.....................................................................................................................................................................................................................................................................................TA-----------------TGTG----T-G-----C-------GTGTGTGTT--TGTA..................................................................................................................................................................................................................22160.006015145035
.....................................................................................................................................................................................................................................................................................TA-----------------TGTG----T-G-----C-------GTGTGTGTT--TGT...................................................................................................................................................................................................................21615.50931801312050
.....................................................................................................................................................................................................................................................................................TA-----------------TGTG----T-G-----C-------GTGTGTGTT--TG....................................................................................................................................................................................................................2097.5668250314026
......................................................................................................................................................................................................................................................................TCTCTCT---CTGAGTA-----------------TGTG----T-G-----C-------GT...............................................................................................................................................................................................................................2313.003101001
...................................................................................................................................................................................................................................................................TGCTCTCTCT---CTGAGTA-----------------TGTG----T-G-----C-------GT...............................................................................................................................................................................................................................2612.002000002
.....................................................................................................................................................................................................................................................................CTCTCTCT---CTGAGTA-----------------TGTG----T-G-----C-------GT...............................................................................................................................................................................................................................2412.002000002
.....................................................................................................................................................................................................................................................................................TA-----------------TGTG----T-G-----C-------GTGTGTGTT--T.....................................................................................................................................................................................................................19171.71296037013
.....................................................................................................................................................................................................................................................................................TA-----------------TGTG----T-G-----C-------GTGTGTGTT--TGTC..................................................................................................................................................................................................................22201.25258032012
......................................................................................................................................................................................................................................................................................A-----------------TGTG----T-G-----C-------GTGTGTGTT--TGTA..................................................................................................................................................................................................................2111.001100000
.............AAAGATTGCAGCGATGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000100
..................................................................................................................................................................................................................................................................GTGCTCTCTCT---CTGAGTA-----------------TGTG----T-G-----C-------GT...............................................................................................................................................................................................................................2711.001000001
..................TTGCAGCGATGGCAGCGACGAGGCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.....................................................................................................................................................................................................................................................................................TA-----------------TGTG----T-G-----C-------GTGTGTGTT--TGTAC.................................................................................................................................................................................................................2311.001100000
...................................................................................................................................................................................................................................TGTAAT----AGTGTGTGCT--------CT................................................................................................................................................................................................................................................................................................1811.001100000
........AGAGCAAAGATTGCAGCGATGGCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
......................................................................................................................................................................................................................................................................TCTCTCT---CTGAGTA-----------------TGTG----T-G-----C-------GTGT.............................................................................................................................................................................................................................2511.001100000
.................................................................................................................................................................................................................................................................................................................................TGTGTGTT--TGTACATACTTCATC------------------------------------------------------------------------...............................................................................................................................2311.001100000
.........................................................................................................................................................................................................................................................................CTCT---CTGAGTA-----------------TGTG----T-G-----C-------GTGTGT...........................................................................................................................................................................................................................2411.001000001
.....................................................................................................................................................................................................................................................................................TA-----------------TGTG----T-G-----C-------GTGTGTGTT--TC....................................................................................................................................................................................................................20200.204001003
.....................................................................................................................................................................................................................................................................................TA-----------------TGTG----T-G-----C-------GTGTGTGTT--......................................................................................................................................................................................................................18200.204200200
.....................................................................................................................................................................................................................................................................................TA-----------------TGTG----T-G-----C-------GTGTGTGTT--TGTT..................................................................................................................................................................................................................22200.153000003
.....................................................................................................................................................................................................................................................................................TA-----------------TGTG----T-G-----C-------GTGTGTGTT--TGTAA.................................................................................................................................................................................................................2390.111000001
.....................................................................................................................................................................................................................................................................................TA-----------------TGTG----T-G-----C-------GTGTGTGTT--TGTAT.................................................................................................................................................................................................................23200.102000002
......................................................................................................................................................................................................................................................................................A-----------------TGTG----T-G-----C-------GTGTGTGTT--TGT...................................................................................................................................................................................................................20100.101100000
......................................................................................................................................................................................................................................................................................A-----------------TGTG----T-G-----C-------GTGTGTGTT--TG....................................................................................................................................................................................................................19130.081100000
droGri2
GTGTGATCAGAGCAAAGATTGCAGCGATGGCTCCGATGAGGCCACGTGCAGTAAGCCAT----CA-AA--TTTT--------AATCTCTA------TTTTAACT-------------------------------------------------------------GTAACTA------AAGCCCTGTCGGCAGTAGTATCGTAATTCTCTTATGTATTTAGTTTAGCTG------------------------------------CTCT---CTGTGTA-----------TTTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCA-----------------GTTAGTGTGCGACA-CA-----------C-------------------T---------------TAAT---------TTTGCTGGCCATAAGTG-TGC----TACA--CATT------GCTGCA-AGAATTGTGT--ATT-----ACTTACCT-AAACAATACTC-------ATGCAATAAAG-CACAAATATTTACA----CACSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
......................AGCGATGGCTCCGATGAGGCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110
droWil2
GTGTGATCAGAATAAAGATTGCAGTGATGGCAGCGATGAGGCCATGTGTAGTAAGCAAA----AA-AA--AAAAATTGAAATTCTTTAGAAATTCTTTAAATCT-----GTG-----T----------------TGT---AT-GG-------TGTTGG--ATATACTTATTA------T-----------------------ACTTTT----------------ATA----------TTTTGTATATTTATTGCTTATGTGTACCTAC----------------TTAT-GTTGGTGTGTG----T-A-----T-------GTTTA------CCAA----------------------------------------------------------------------------------------------------------ACTTA--TGTT------TTTATG-TGCCTCATAT--CCT-----GGTTCCCT-GCTAA--GTAG-------ACACAATACTA-CATATACATACATA----CATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........ATAAAGATTGCAGTGATGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200020
.............................................................................................................................................................................................................................................................CTTATGTGTACCTAC----------------TTAT-GTTG............................................................................................................................................................................................................................................................2311.00100001
....................GCAGTGATGGCAGCGATGAGGCCAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
.......................................................................................................................................................................................................................................................................................................GTGTG----T-A-----T-------GTTTA------CCAA----------------------------------------------------------------------------------------------------------ACTT....................................................................................................2111.00100010
........AGAATAAAGATTGCAGTGATGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
.............AAAGATTGCAGTGATGGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
.........GAATAAAGATTGCAGTGATGGCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
dp5
GTGCGATCAAAACAAGGACTGCGACGATGGCAGCGATGAGGCCCAGTGCAGTAAGCCTT----CAATC--------------ATATCTAAG-TTTCTGTTTGCT-----GCAACTCTT----------------TGTT--TT-GG-------TGTTGG--TGA--------------------------------------AATCTAT-------------------------CTATCGTTCTC----------------------------------------------------------------------------------------------------------TATC---------------------------------TGCCTTTCCTGCTACGTTATA----------------------TCTGTTGA----CACA--CATTTGTATTTCTCTG-AAAGTTGTGT--AATTCCACACTTACCT-ACTAC--TCGTATATCC-TACCAATAAAG-CACAAATATTTACG----CAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............................................................................................................................................................................................................CTAT-------------------------CTATCGTTCTC----------------------------------------------------------------------------------------------------------TATC---------------------------------TGCC..........................................................................................................................................................2311.0010001000000
..........AACAAGGACTGCGACGATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
..............AGGACTGCGACGATGGCAGCGATGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100000
.............AAGGACTGCGACGATGGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
......................GACGATGGCAGCGATGAGGCCCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
..........AACAAGGACTGCGACGAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
..........AACAAGGACTGCGACGATGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000001
.......................ACGATGGCAGCGATGAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
droPer2
GTGCGATCAAAACAAGGACTGCGACGATG-CAGCGATGAGC--CAGTGCAGTAGCTCAT----CA-T---------------AT---CTAGCTC--TGTT-GCT-----GCA-CT--C----------------T---TGTT-AG-------TGT-------------------------------------------GTGAATCTAT-------------------------CTATCGTTGC-----------------------------------------------------------------------------------------------------------TATC---------------------------------TGCCT-GCCTGCTACGT-ATATACATGTAT--CC---------TCTG-TGA----CACA--CATT-GTAT-TCTCTG-A-AGTTGTGT--ACTTCCACACT-ACCT-ACTAC--TCGTATATCCTACCCAATAAAGCCACAAATATTTACGCA--GACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
GTGCGATCAGCACAGCGACTGTCGGGACGGAAGCGACGAGGCCCAGTGCAGTAAGCCCC----TA------------------------------------TCT-----GCT-----T----------------TGTTTGTT-GG-------TGTTGG--CTATCT---------------------------------------------------------------------TCTGTTGCATAT------------------A-CC---CCGCTTTTACCCTCTA-CTTGGTGTCGG----T-T-----G-------CTATAT------CTA-------TAACACGCTATCCTATACTTTATGTCC-------------------C------------------------------AGCTGCACTTGAGAG-TGCCAAGCACA--CATT------TCCCAG-GAAATTGTGT--AAT-----GCCCTGCTTAAAGA--TTGT-------ACGTTATAAAG-CACAAATATTTGCTAA--CACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........ACAGCGACTGTCGGGACGGAAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
....................GTCGGGACGGAAGCGACGAGGCCCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
GTGCGATCAGCACAGCGACTGTCGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
................GACTGTCGGGACGGAAGCGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
............................GGAAGCGACGAGGCCCAGTGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
..............GCGACTGTCGGGACGGAAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
droBip1
GTGCGATCAGCACAGTGACTGCCGGGACGGAAGCGACGAGGCCCAGTGCAGTAAGCCAT----TA-TC--T--------------------------------------GAT----------------------TGTTTGTT-GGTGT------TTGG--CTA---------------TG---------------------------------------------------------TCTTGAATAT------------------A-CC---CCGCTTTTACCCTGTA-CTTGGTGTCGG----T-T-----G-------CAATATCTATATCTA-------TATCACACTATCCTATGCTTTATAACA-------------------C------------------------------AGCTGCACTTGAGAG-TTCCAAGCACA--CATT------TTCCAG-GAAATTGTGT--AAT-----GCCCTGCTTAAAGA--TTGT-------ATGCTATAAGG-CACAAATATTTGCGAA-ACTCSizeHit CountTotal NormTotal
No Reads
droKik1
GTGCGATCAGAACAAAGATTGTCGCGACGGAAGCGATGAGGCCCAGTGCAGTAAGCCAA----AA-CC--AAAT--------CAATGCTAGCTTTCTA---TCT-----GTT-----CTGTACTTATTCCTCTGCGC---TT-GG-------TGTTGG--CTGCTT---T------AAC---------------------------------------------------------------------------------------------CTGCT---------------------------------------------CTAT------ATATATACTGT----TACTATCCCA-----------CTTTACTTTCTCCTCTTCTTACCC-AGCTCTTGAGT-ATAT----------------------------ACACACACA--TATT------TCTGTG-GAAATTGTGT--AAT-----GCCATGCT-TAAAC--TCGC-------ATGCAATAAAG-CACAAATATTTACA----CAASizeHit CountTotal NormTotal
No Reads
droFic1
GTGCGATCAGACCAAAGATTGCCGCGACGGAAGCGATGAGGCCCAGTGCAGTAAGCCAT----AA-CC--GATT--------ATTTCCTAGCCT-CTTTTAC--------------------------------TGC---TT-GG-------TGTTGG--TTGCTT---T------AATAA-----------------CGGAATTTTA-----------------------------TTTGGATTTT------------------T-CC---CCTTTTA-------TG-CTTGGTGTTGG----T-T-----G-------CTTTTTGTT--CCCGTAGACTGTAGTGTATTTTT-----------------------------------------------------------------CCCTGCACTTAAGTG-TGCCATGAACA--CATT------TCCCTG-AAACTTGTGTGTGATGCTATGCTATGCT-AAAAC--TCGC-------ATGCAATAAAG-CACAAATATTTACG----CACSizeHit CountTotal NormTotal
No Reads
droEle1
GTGCGATCAGAACAAAGATTGCCGCGATGGAAGCGATGAGGCCCAGTGCAGTAAGCCAA----AA-TC--GAAT--------ATTCCTTAGACTTTT---CTCT-----GTT-T--TT----------------TGC---TT-GG-------TGTTGG--CTGCTT---T------AATAT-----------------ACGCAATTAT-----------------------------CTTAGATT-T------------------T-CA---CTGCCTT-------TG-CTTGGTGTTGG----T-T-----G-------CTATTTATT--TCTAGATGCTGTACCGAACTATT------------------------------------------------------------------CCTGCACTTGACTG-TGCCATGCACA--CATT------TCTCGA-AGAATTGTGT--AAT-----GCCATGTT-AAAAC--TCGT-------ATGCAATAAAG-CACAAATATTTACG----CATSizeHit CountTotal NormTotal
No Reads
droRho1
GTGCGATCAACACAAAGATTGCCATGATGGAAGTGATGAGGCTCAGTGCAGTAAGCCAT----AA-CC--GAAT--------ATTCCTAAGTCCTTTTCT-CTT-----G-T-T--TT----------------TGC---TT-GG-------TGTTGG--CTGCTA---T------AATAA-----------------CCGTAATTTA-----------------------------TTTCGATT-T------------------T-CC---CTGCTTT-------TG-CTTGGTGTTGG----T-T-----G-------CAATTTATT--TCTATATATTATATTGTAGAATT-----------------------------------------------------------------CCCTACACTTGACTT-TACTATGCACA--CATT------TCTCTG-AGCATTGTG-----------------CT-AAAAC--TCGT-------ATGCAATAAAC-CACAAATATTAACG----CACSizeHit CountTotal NormTotal
No Reads
droBia1
GTGTGACCAGAACAAGGATTGTCGCGACGGAAGCGATGAGGCCCAGTGCAGTAAGCCAT----AA-CC--GAAT--------ATTTCCTAGCTTTCT-------------------------------------------TT-GG-------TGCTGG--TTGCCA---T------AATAA-----------------CCGAATTTAT-----------------------------CCTTGATTTT------------------T-CT---CTGCCCT-------TC-CTTGGTGTTGG----TTT-----G-------CTATTTATC--C--------------GTATTTAT-----------------------------------------------------------------CCCTGCACTCGACTG-TGCCAAGCACA--CATT------TCCCCG-AGTCTAGTGT--AAT-----GCCATGCT-TAAGC--CAGT-------ATGCAATAGAG-CACAAATATTTGCGAAAACACSizeHit CountTotal NormTotal
No Reads
droTak1
GTGCGATCAGACCAAGGATTGTCGCGATGGCAGCGACGAGGCCCAGTGCAGTAAGCCAT----GA-CCATGAAT--------ATTTCCC--------------------GCT-----T----------------TGCTTTTT-GGTGCTTGGTTCTGG--TTGCAA---T---AATAGCAA-----------------CCGAATTTAT-----------------------------CTTTGATTTT------------------T-CC---TTGCTTT-------TA-TTTGGTGTTGG----C-T-----G-------CTATTTATA--CCCGAATGCTTTAGTGAACTACT--------------C-------------------C------------------------------CCCTGCACTTGAATG-TGCCATGCACACTCAGT------TCTCTG-AGA-----------T-----GCTTTGCT-AAAAC--TATT-------ATGCAATAGAG-CACAAATATTTACG----AACSizeHit CountTotal NormTotal
No Reads
droEug1
GTGCGATCAGAGCAAGGATTGTCGCGATGGAAGCGATGAGGCGATGTGCAGTAAGCCAA----AAACC--GAAT----AT--ATTTCTTAGCTTGCTTTTGC-------ACT-----T----------------TGC---TTACG-------TGTTGG--TTGCAA---T------AATAA-----------------CCGAATTTAT-----------------------------CTTAGATTTT------------------TTCA---CTGCTTT-------TGTTTTGGTGTTGG----TTT-----G-------GTATTTTTT--CCTATATGCTATAGTGTACTACA-CA-----------C-------------------C------------------------------CCCTGCACTCGACTG-TGTCATGCACA--CATT------TCCCGA-AGACTTGTGTGTAAT-----GCCATGCT-GAAAC--TCGT-------ATGCAATAAAG-CTCAAATATTTACG----CACSizeHit CountTotal NormTotal
No Reads
dm3
GTGCGATCAGAACAAAGATTGTCGCGATGGAAGCGATGAGGCGCAGTGCAGTAAGCCAT----AA-CC--GAAT--------ATTTCCTAGCTCTCTGTTACCTGCTTTGCT-----T----------------TGC---TT-GG-------TGTTGG--TTGCCG---T------AATAA-----------------TTGAAATTAT-----------------------------CGTAGATTTT------------------T-CC---CTGCTTT-------CC-TTTGGTGTTGG----T-T-----G------CTTATTTATT--TCTAGATACTGTAGTGCACTATT-----------------------------------------------------------------CCCCGTACTTGACTG-TGCCATGAACA--CATG------TCCCTG-AGACTTGTGT--TGT-----GACATCGT-GAAGC--TCGT-------ATGCAATAATG-TACAAATATTTACG----CACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........................GATGGAAGCGATGAGGCGCAGTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23111.001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-TGCCATGAACA--CATG------TCCCTG-AGAC............................................................................27111.001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011
...................................................................................................TACCTGCTTTGCT-----T----------------TGC---TT-GG-------TGTTGG--T................................................................................................................................................................................................................................................................................................................................................................................................2819.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009
......TCAGAACAAAGATTGTCGCGATGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
........AGAACAAAGATTGTCGCGATGGAAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010201000000
........................CGATGGAAGCGATGAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000101000000
............CAAAGATTGTCGCGATGGAAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2215.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..................TTGTCGCGATGGAAGCGATGAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
..........................................................T----AA-CC--GAAT--------ATTTCCTAGCTCTCTGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............AAAGATTGTCGCGATGGAAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000100000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GATGGAAGCGATGAGGCGCAGTGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.........................GATGGAAGCGATGAGGCGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.......................GCGATGGAAGCGATGAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000001000000
......TCAGAACAAAGATTGTCGCGATGGAAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
........................CGATGGAAGCGATGAGGCGCAGTGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000001000000
.....ATCAGAACAAAGATTGTCGCGATGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TCAGAACAAAGATTGTCGCGATGGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TCAGAACAAAGATTGTCGCGATGGAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............AAGATTGTCGCGATGGAAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000
...................TGTCGCGATGGAAGCGATGAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................TT------------------T-CC---CTGCTTT-------CC-TTTGGTGTTGG----T-...............................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................ATTGTCGCGATGGAAGCGATGAGGCGCAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002
......................CGCGATGGAAGCGATGAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.........................................................................................................................................................................................................................................................................T-CC---CTGCTTT-------CC-TTTGGTGTTGG----T-...............................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CGCGATGGAAGCGATGAGGCGCAGTGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.............AAAGATTGTCGCGATGGAAGCGATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.............AAAGATTGTCGCGATGGAAGCGATGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............AAGATTGTCGCGATGGAAGCGATGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TGTCGCGATGGAAGCGATGAGGCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TGTCGCGATGGAAGCGATGAGGCGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...CGATCAGAACAAAGATTGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..............................AAGCGATGAGGCGCAGTGCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CAAAGATTGTCGCGATGGAAGCGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
................................GCGATGAGGCGCAGTGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................TTATT--TCTAGATACTGTAGTGCACT..................................................................................................................................................................................................2511.0010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........AACAAAGATTGTCGCGATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CAAAGATTGTCGCGATGGAAGCGATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-TGCCATGAACA--CATG------TCCCTG-AGA.............................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001
...........ACAAAGATTGTCGCGATGGAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GATTGTCGCGATGGAAGCGATC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................T-------CC-TTTGGTGTTGG----T-T-----G------C.................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........AGAACAAAGATTGTCGCGAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............AAAGATTGTCGCGATGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
..........................ATGGAAGCGATGAGGCGCAGTGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...........ACAAAGATTGTCGCGATGGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.......................GCGATGGAAGCGATGAGGCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
...........ACAAAGATTGTCGCGATGGAAGCGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CGCGATGGAAGCGATGAGGCGCAGTGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGT--TGT-----GACATCGT-GAAGC--TCG.........................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACATCGT-GAAGC--TCGT-------ATGCAATAA........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................GTTGG----T-T-----G------CTTATTTATT--TCTAGATAC.............................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TCGCGATGGAAGCGATGAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.......................GCGATGGAAGCGATGAGGCGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TGTCGCGATGGAAGCGATGAGGCGCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CAGAACAAAGATTGTCGCGATGGAAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.......................GCGATGGAAGCGATGAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TGTCGCGATGGAAGCGATGAGGCGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CGCGATGGAAGCGATGAGGCGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................CGCGATGGAAGCGATGAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
................GATTGTCGCGATGGAAGCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...............................AGCGATGAGGCGCAGTGCAGTAAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...................TGTCGCGATGGAAGCGATGAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CAAAGATTGTCGCGATGGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.................ATTGTCGCGATGGAAGCGATGAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
....................................TGAGGCGCAGTGCAGTAAGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
................GATTGTCGCGATGGAAGCGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CGCGATGGAAGCGATGAGGCGCAGTGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCTG-AGACTTGTGT--TGT-----GACATCGT-...................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................AA-CC--GAAT--------ATTTCCTAGCTCTCTGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TCAGAACAAAGATTGTCGCGATGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................C--GAAT--------ATTTCCTAGCTCTCTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CAAAGATTGTCGCGATGGAAGCGATGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............AAAGATTGTCGCGATGGAAGCGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................AGCGATGAGGCGCAGTGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GATGGAAGCGATGAGGCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GCGATGGAAGCGATGAGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
droSim2
GTGCGATCAGAACAAAGATTGTCGCGATGGAAGCGATGAGGCGCAGTGCAGTAAGCCAT----AA-AC--GAAT--------ATTTACTAGCTTTCTGTTACCT-----GCT-----T----------------TGC---TT-GG-------TGTTGG--TTGCCG---C------AATAA-----------------CTGAAATTAT-----------------------------CGTAGATTTT------------------T-TA---CTGCTTC-------CC-TTTGGTGTTGG----T-T-----G-------CTATTTATT--CTTAGATACTGTAGTGCACTATT-----------------------------------------------------------------CCCTGCACTTGACTG-TGCCATGAACA--CATG------TCCCTG-CGACTTGTGT--TGT-----GCCATGGT-GAAGC--TCGT-------ATGCAATAATG-TACAAATATTTACG----CACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......TCAGAACAAAGATTGTCGCGATGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2514.00400000020020000000
.................................................................................................................................................................................................................................................................................................................................TATTTATT--CTTAGATACTGTAGTGCACTA.................................................................................................................................................................................................2913.00300000012000000000
.......CAGAACAAAGATTGTCGCGATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
......TCAGAACAAAGATTGTCGCGATGGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
.............AAAGATTGTCGCGATGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
......TCAGAACAAAGATTGTCGCGATGGAAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000001000000000
......TCAGAACAAAGATTGTCGCGATGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000010000000
.......CAGAACAAAGATTGTCGCGATGGAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCACTTGACTG-TGCCT.........................................................................................................1811.00101000000000000000
............CAAAGATTGTCGCGATGGAAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
..................................GATGAGGCGCAGTGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1640.25100000000001000000
droSec2
GTGCGATCAGAACAAAGATTGTCGCGATGGAAGCGATGAGGCGCAGTGCAGTAAGCCAT----AA-CC--GAAT--------ATTTACTAGCTTTCTGTTACCT-----GCT-----T----------------TGC---TT-GG-------TGTTGG--TGGCCG---T------AATAA-----------------CTGAAATTAT-----------------------------CGTTGATTTT------------------T-TA---CTGCTTC-------CC-TTTGGTGTTGG----T-T-----G-------CTATTTATT--CTTAGATACTGTAGTGCACTATT-----------------------------------------------------------------CCCTGCACTTGACTG-TGCCCTGAACA--CATG------TCCCTG-CGACTTGTGT--TGT-----GCCATGGT-GAAGC--TCGT-------ATGCAATAATG-TACAAATATTTACG----CACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........ACAAAGATTGTCGCGATGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
.......................GCGATGGAAGCGATGAGGCGCAGTGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100
.........................GATGGAAGCGATGAGGCGCAGTGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
droYak3
GTGCGATCAGAACAAGGATTGTCGCGATGGCAGCGATGAGGCGCAGTGCAGTAAGCCAT----AA-AC--GAAT--------ATTTCCTAGCTACCGCTTACCT-ATTTGCT-----T----------------TGC---TT-GG-------TGTTGGTGTTGCTT---TTAGAGTAATAA-----------------CCGAAATAAT-----------------------------CGTAGATTTC------------------T-TCTTTCTGCTTC-----TCTT-TTTGGTGTTGG----T-T-----G-------ATATTTATA--TCTAGATGCTATAGTGCACTATT-----------------------------------------------------------------CGCTGCACTTGACTG-TGCCATGAACACACATG------TCCCTGAAGACTTGTGT--TGT-----GCCATGGT-GAAGC--TCGT-------ATGCAATAATG-TACAAATATTTACG----CACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................GATGGCAGCGATGAGGCGCAGTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
................................................................................................................................................................................................................................................................................................................................ATATTTATA--TCTAGATGCTATAGT.......................................................................................................................................................................................................2411.00100000010000
..................................GATGAGGCGCAGTGCAGTAAGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
...........ACAAGGATTGTCGCGATGGCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
......................CGCGATGGCAGCGATGAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
...............GGATTGTCGCGATGGCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
droEre2
GTGCGATCAGGCCAAAGATTGTCGCGATGGAAGCGATGAGGCGCAGTGCAGTAAGCCAA----AA-CC--AAAT--------ATTTCTTAGCTCTCCCTAGCCT-----GCT-----T----------------TGC---TT-GG-------TGTTGG--ATA--A---T------AATAA-----------------CTGAAATTAT-----------------------------TGTAGAACTT------------------T-CC---CTGCT-------------TTGGTGTTGG----T-T-----G-------CTATTTATA--TCTAGATACTACAATGCACTTTT-----------------------------------------------------------------CCCTGCACTTGAATG-TGCCATGAGCA--CATG------TCCCTG-AGACTTGTGT--TGT-----GTCCTGGC-GAAGC--TCGT-------ATGCAATAATG-CACAAATATTTACG----CACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............AGATTGTCGCGATGGAAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000020
......................CGCGATGGAAGCGATGAGGCGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000110
.............AAAGATTGTCGCGATGGAAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
.......CAGGCCAAAGATTGTCGCGATGGAAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
............CAAAGATTGTCGCGATGGAAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
................GATTGTCGCGATGGAAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000

Generated: 05/16/2015 at 08:40 PM