ID:

dvi_4241

Coordinate:

scaffold_12855:6920807-6920951 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [dvir_GLEANR_10862:5]; exon [dvir_GLEANR_10862:4]; CDS [Dvir\GJ10975-cds]; CDS [Dvir\GJ10975-cds]; intron [Dvir\GJ10975-in]

No Repeatable elements found

Sense Strand Reads

##################################################-------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CTATGATGCCACCTACCATACGATTGTCAATGATGCCATACGCACGCCAGGTTTGATATATGAAAAGCAAGTCGGTGTTGAATTTTGAATGTCAATTCCAAGCTGCCTTATTTGGAATTTGGTTCAATTCTGCACAGGCCTATTCAACTTTATAAAACTCGATATTTTATAACAATTTCTTTCCTCCCCATATAGATCTGGGCGGCACGAACAGCAGCACGGACGTAGTTGAGAACATACTCAAG
**************************************************......((((((........(((.((((.((((..(((((...(((((((((........)))))))))..))))))))).)))).)))..........((((((((.......))))))))................)))))).**************************************************
Read size # Mismatch Hit Count Total Norm Total M047
female body
M028
head
SRR060667
160_females_carcasses_total
M027
male body
SRR1106729
mixed whole adult body
M061
embryo
V047
embryo
V053
head
V116
male body
SRR060659
Argentina_testes_total
SRR060661
160x9_0-2h_embryos_total
SRR060664
9_males_carcasses_total
SRR060665
9_females_carcasses_total
SRR060666
160_males_carcasses_total
SRR060672
9x160_females_carcasses_total
SRR060674
9x140_ovaries_total
SRR060673
9_ovaries_total
SRR060669
160x9_females_carcasses_total
...........................................................................................................................................................................................................GGCACGAACAGCAGCACGGAC..................... 21 0 1 2.00 2 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................GTCTGGGCGGCACGAACGGC.............................. 20 2 1 2.00 2 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................AGCAGCACGGACGTAGTTGAGAACA........ 25 0 1 2.00 2 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................AGCAGCACGGACGTAGTTGAGAAC......... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................AGATCTGGGCGGCACGAACAGCA............................. 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.............TACCATACGATTGTCAATGATGCCAT.............................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................AGCACGGACGTAGTTGAGAA.......... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....GATGCCACCTACCATACGATT............................................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................CCAGATCTGGGCGGCACGAACAGC.............................. 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................AGATCTGGGCGGCACGAAC................................. 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................AGCACGGACGTAGTTGAG............ 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CAGCAGCACGGACGTAGTTGAGAACA........ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................GCACGGACGTAGTTGAGA........... 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....GATGCCACCTACCATACGATTGTCA........................................................................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................CATACGATTGTCAATGAT................................................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TGACGTAGTTGAGAACAT....... 18 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...................................................................................................................................................................................................GTCTGGGCGGCACGAACGGCA............................. 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................AAGCAAGTGGGTGTCGAATTTT............................................................................................................................................................... 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.............TACCATACGATTGTCAATGATGCCATA............................................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................GAACAGCAGCACGTGCGTAGTTGA............. 24 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................CAGATCTGGGCGGCACGAA.................................. 19 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................TGCACGAACAGCAGCACGGACGTAGTT............... 27 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......TGCCACCTACTATACGATTGTCAATGAT................................................................................................................................................................................................................... 28 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................TCTGGGCGGCACGAACAGCAGCA.......................... 23 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........CCACCTACCATACGATTGTCA........................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................TACGATTGTCAATGATGCCATACGCA......................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............TACCATACGATTGTCAATGATGCC................................................................................................................................................................................................................ 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................TACGATTGTCAATGATGCCA............................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................ATGATGCCATACGCACGCCAGATC................................................................................................................................................................................................ 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................CAACTTTATAAAACCCGATATTTTAT........................................................................... 26 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
................................................................................................................................................................................................................GAACAGCAGCACGGACGTAGTTGAGA........... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................GCCAGATCTGGGCGGCACGAACAGCAGCACGGAC..................... 34 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................GCAGCACGGACGTAGTTGA............. 19 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................GGGCGGCACGAACAGCAGCACGGA...................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................AGCACGGACGTAGTTGAGAACATACTCA.. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................CAGCACGGACGTAGTTGA............. 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................ACGAATAGCAGCACGGAC..................... 18 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..........................TCAATGATGCCATACGCACGCC..................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................AGATCTGGGCGGCACGAACAGCAG............................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................GAACAGCAGCACGGACGTAGTTGAGAA.......... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................TACGATTGTCAATGATGCC................................................................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................GAACAGCAGCACGGACGT................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.................................................................................................................................................................................................................AACAGCAGCACGGACGTAGTTGAGA........... 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..ATGATGCCACCTACCATACG............................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............ACCATACGATTGTCAATGAT................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................AACAGCAGCACGGACGTAGTTGAGAAC......... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................CTGGGCGGCACGAACGGCAG............................ 20 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................CTGGGCGGCACGAACGGCAGC........................... 21 1 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................GTCTGGGCGGCACGAACG................................ 18 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................CGTCAGGGTTGATATATG....................................................................................................................................................................................... 18 2 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................CACGTCTGGGCGGCACGAAC................................. 20 3 7 0.14 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................TCGGTGATGAATTTGGAA............................................................................................................................................................ 18 2 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
...........................CAATGGTACCATACGCAGG....................................................................................................................................................................................................... 19 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.........................................................................................................................GTTCAAATCTGCCCAGACC......................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

GATACTACGGTGGATGGTATGCTAACAGTTACTACGGTATGCGTGCGGTCCAAACTATATACTTTTCGTTCAGCCACAACTTAAAACTTACAGTTAAGGTTCGACGGAATAAACCTTAAACCAAGTTAAGACGTGTCCGGATAAGTTGAAATATTTTGAGCTATAAAATATTGTTAAAGAAAGGAGGGGTATATCTAGACCCGCCGTGCTTGTCGTCGTGCCTGCATCAACTCTTGTATGAGTTC
**************************************************......((((((........(((.((((.((((..(((((...(((((((((........)))))))))..))))))))).)))).)))..........((((((((.......))))))))................)))))).**************************************************
Read size # Mismatch Hit Count Total Norm Total SRR060680
 9xArg_testes_total
V116
male body
V047
embryo
SRR060658
140_ovaries_total
SRR060661
160x9_0-2h_embryos_total
SRR060657
140_testes_total
SRR060667
160_females_carcasses_total
SRR060669
160x9_females_carcasses_total
V053
head
M047
female body
SRR060664
9_males_carcasses_total
SRR060687
9_0-2h_embryos_total
SRR060686
Argx9_0-2h_embryos_total
...........................................................................................................................................................................TGTCAAAGGAAGGAGGGGTA...................................................... 20 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................TGTCAAAGGAAGGAGGGGTAG..................................................... 21 3 2 1.00 2 0 0 0 1 1 0 0 0 0 0 0 0 0
........GGTGGATGGTATGCTAACAGTT....................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................TCAAAGGAAGGAGGGGTA...................................................... 18 2 3 0.67 2 0 0 1 0 0 1 0 0 0 0 0 0 0
..............................ACTACGGTATGAGGGGGGTC................................................................................................................................................................................................... 20 3 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0
................................................................TTGGTTTAGCCACTACTTAAA................................................................................................................................................................ 21 3 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0 0
....CTACGGGGGCTGGCATGC............................................................................................................................................................................................................................... 18 3 17 0.18 3 0 0 0 0 0 0 0 0 0 1 1 1 0
................................................................TTGGTTTAGCCACTACTTAA................................................................................................................................................................. 20 3 9 0.11 1 0 0 0 0 0 0 0 1 0 0 0 0 0
....CTACGGTGGGTGGTCGGCTA............................................................................................................................................................................................................................. 20 3 12 0.08 1 0 0 0 0 0 0 0 0 1 0 0 0 0
............................................................................................................................GTTTAGACGTGGCCGGAAA...................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12855:6920757-6921001 + dvi_4241 CTATGATGCCACCTACCATACGATTGTCAATGATGCCATACGCACGCCAGGTTTG-AT-------ATATGAAAA---G-CAAGTC--GGTGTTGAATTTTGAATGTCAATTC-CAAGCTGCCTTATTTGGAAT---------------------------------TTGGTTCAATTCTG--C----------ACAGGCCTATTCAACTTT----ATAA----------------------AA---CTC--------GATATTTTATAACAATTTCTTTC-----CTCCCCATATAGATCTGGGCGGCACGAACAGCAGCACGGACGTAGTTGAGAACATACTCAAG
droMoj3 scaffold_6540:25691812-25692003 - CTATGACGCTACCTACCAGACAATTGTTAACGATGCTATTCGCACGCCAGGTTTG-TT---------GAG-C-----------------------------------------------------------ATGT----GTGAACATGAGTTCCCT---------------------TTACACATAGACGTCGATTTTCATATTTAACAC------ATA----------------------TATATT-----------------------TAACTT---G-----T-TTCCTTGTAGATCTCGGCGGCAATCACAGCAGCACCGATGTGGTTGAAAACATTCTCAAG
droGri2 scaffold_14906:3061238-3061466 + CCATGATGCCACCTATCAGACTATTGTTAAAGATGCCATACGCACGCCAGGTAAT-AT-------TTATC-T-----C---------C-------------------------CAAGTTGATTTGTTCTGAATGCAGCAGTAAATATGAATCTTAAATTTGTTTCTTTATTTCAATTC---------------------AATATAAATAGA-ATATAAA----------------------TCATTATC---------------------CTTAAA---ACTTTGT--ATATTTTAGATATTGGAGGCGTAAACAGCAGCACTGATGTCGTTGAAAACATACTCAAA
droWil2 scf2_1100000004943:14540092-14540273 - CTATGATGCCACCTATCAGACAATTGTAAAAGATGCCATACGCACACCCGGTAGG-AA-------TGATT-C-----C---------T-----------------------------------------------------------------------------------------------------------------ATATAACATT----TTACATTATCTGATCACCATCT---TATCTAATTGTTATATT-------------TTCCAT---G-----T-TTATATACAGATTTGGGTGGCAATCATTCGAGCACCGATGTTGTTGAGAATATACTCAAA
dp5 2:23591501-23591657 - CTACGAGGCCACCTATCAGACCATTTGCAATGATGCCATCCGCACACCAGGTACG-CGCGCCAAC------TAATTGCTTAAG--TTT-------------------------GGT-----------------------------------------------------------------------------TT-TATT-----------------------------------------------TA---------------------ATCGAA---A-----T--ATTTTACAGATCTGGGCGGCAACCACTCCAGTACCGATGTTGTTGAGAATATACTCAAA
droPer2 scaffold_3:6366258-6366414 - CTACGAGGCCACCTATCAGACCATTTGCAATGATGCCATCCGCACACCAGGTACG-CGCGCCAAC------TAATTGCTTAAG--TTT-------------------------GGT-----------------------------------------------------------------------------TT-TATT-----------------------------------------------TA---------------------ATCGTA---A-----C--ATCTTACAGATCTGGGCGGCAACCACTCCAGTACCGATGTTGTTGAGAATATACTCAAA
droAna3 scaffold_13340:11620081-11620241 - TCAAGATGCCACCTACCAGACCATCGTCGAAGATGCCATTCGTACACCTGGTAAA-CC-A-----CAAAC-C-----A---------T-------------------------GCA-----------------------------------------------------------------------------AT-CAAGCACCAATCC-------ACA----------------------TCTATATC---------------------GTAT-A---C-----T--ATCTTACAGATCTGGGCGGTAACCACTCCAGCACTGATGTTGTTGAGAACATACTCAAA
droBip1 scf7180000396691:527979-528143 - TCATGATGCCACCTACCAGACCATCGTCGACGATGCCATTCGCACACCTGGTAAA-CA-------ATATT-------------------------------------------GCA-------------------------------------------------------------------------------------ACCAAACACCAATCCACA-T--------------CTATATCGTTGTTT---------------------ATATTA---T-----C--TTTTTACAGATCTGGGCGGTAACCACTCAAGCACTGATGTTGTTGAGAACATACTCAAA
droKik1 scf7180000301923:328484-328642 + CCAGGAGGCTGTCTACCAGACCATTGTCGACGATGCCATTCGCACCCCAGGTAAATAT-------CGATC-T-----C-TAAG--CCT-------------------------GCT-----------------------------------------------------------------------------TT-TCT----------------ATGC----------------------CTTTTATC---------------------GTTTTA---T-----T--CCCCTACAGATCTGGGCGGCACCCACTCCAGTACCGACGTTGTTCAGAATATACTCAAG
droFic1 scf7180000454055:1423285-1423448 + CCAGGAGGCCACCTACCAGACCATCGTCAACGATGCCATTCGCACGCCAGGTGAT-CA-------TGATC-------C---------C-------------------------GTA-----------------------------------------------------------------------------GATTTCTCACCCTGCAGA----ATAA----------------------CTTATTTA---------------------ATATTC---G-----T--ATCTTGCAGATATTGGCGGCACCCACTCCAGTACCGATGTGGTTGAAAACATACTCAAG
droEle1 scf7180000491280:3228821-3228982 + CCAGGAGGCAGTCTACCAGACCATTGTCAACGATGCCATTCGCACGCCAGGTCAA-TC-------CGATT-A-----G---------T-------------------------AAA-----------------------------------------------------------------------------GC-TTTTCACCCATCAAA----ACTA----------------------TTAATATC-----------------------CACT---G-----T--TTCTTACAGATATTGGAGGCAACCACTCCAGCACCGATGTCGTTGAAAACATACTCAAG
droRho1 scf7180000779501:408397-408561 - CCAGGAGGCTGTCTACCAGACCATTGTCAACGATGCCATTCGCACGCCAGGTGAA-CC-------CGAAC-A-----G---------C-------------------------GTA-----------------------------------------------------------------------------GTTTTTTTACACAGCAGA----ATCA----------------------TTTATATA---------------------ATCTCC---G-----T--TGTTTACAGATGTTGGAGGCACCCACTCTAGTACCGATGTGGTTCAAAACATACTCAAG
droBia1 scf7180000302136:2363657-2363822 + CCAGGAGGCCGTCTACCAGACCATTGTCAACGATGCCATTCGCACGCCAGGTGAT-TA-------TCATC-C-----T---------G------------------------CAAA-----------------------------------------------------------------------------GCATTCTTACCGAACGGA----AGCA----------------------CTTATATC---------------------ACCTTT---G-----T--GTCTTCCAGATGTTGGCGGCACCCACTCCAGTACCGATGTGGTTGAGAACATACTCAAG
droTak1 scf7180000415700:22019-22174 - CCAGGAGGCCGTCTACCAGACCATTGTCAACGATGCCATTCGCACGCCAGGTGGG-GA-------TCA--------------------------------------------------------------------------------------------------------------------------------TTCTTATTTACCAAA----ATCA----------------------CCTATATC---------------------ATCCTC---C-----TTTCCTCCACAGATGTCGGCGGCAGCCACTCCAGTACCGATGTGGTCGAAAACATACTCAAG
droEug1 scf7180000409682:1117678-1117842 - CCAGGAGGCTGTCTACCAGACCATTGTCAACGATGCCATTCGCACGCCTGGTGAT-TA-------TTAAC-C-----C---------C-------------------------GTG-----------------------------------------------------------------------------ACTTGCTTACCCAACAGA----ATCA----------------------CATATATC---------------------ATCTCT---G-----T--TTCTTCTAGATATTGGCGGCACCCACTCCAGTACTGATGTGGTTGAAAACATACTCAAG
dm3 chr3R:21507964-21508127 + TCAGGAGGCCGTCTACCAGACCATTGTCAACGATGCCATTCGCACGCCAGGTGAT-CA-------CGTCT-C-----T---------C-------------------------GTA-----------------------------------------------------------------------------GT-TATTCAATAAACAGA----ATCA----------------------CCTTTATC---------------------ATCTAA---A-----T--CTCTTACAGATATTGGCGGCACCAACTCCAGTACCGATGTGGTTGAGAATATACTCAAG
droSim2 3r:21019486-21019649 + dsi_8983 TCAGGAGGCCGTCTACCAGACCATTGTCAACGATGCCATTCGCACGCCAGGTGAT-CA-------CGACT-C-----T---------C-------------------------GTT-----------------------------------------------------------------------------GT-TGTTCAATAAACAGA----ATCA----------------------CCTTTATC---------------------GTCTAA---A-----T--CTCTTACAGATATTGGCGGCACCAACTCCAGTACCGATGTGGTTGAGAATATACTCAAG
droSec2 scaffold_13:294699-294862 + TCAGGAAGCCGTCTACCAGACCATTGTCAACGATGCCATTCGCACGCCAGGTGAT-CA-------CAACT-C-----T---------C-------------------------GTA-----------------------------------------------------------------------------GT-TATTCAATAAACAGA----ATCA----------------------TCTTTATC---------------------ACCGAA---A-----T--CTCTTACAGATATTGGCGGCACCAACTCCAGTACCGATGTGGTTGAGAATATACTCAAG
droYak3 3R:24964760-24964923 - CCAGGAGGCCGTCTACCAGACCATTGTCAACGATGCCATTCGCACGCCAGGTGAT-CA-------CGACC-C-----C---------C-------------------------ATA-----------------------------------------------------------------------------GT-TATTTCATAAACAGA----ATCA----------------------ACTTTATC---------------------ATCTCA---A-----A--CTCTTGCAGATATTGGCGGCACCAACTCCAGTACCGATGTGGTTGAAAATATACTCAAG
droEre2 scaffold_4820:6533777-6533941 - CCAGGAGGCTCTCTACCAGACCATTGTCAACGATGCCATTCGCACGCCAGGTGAT-CA-------TCACA-C-----C---------C-------------------------ACA-----------------------------------------------------------------------------ATTTTCTCAATAAACAGA----AACA----------------------CCTTTATC---------------------ATCTCA---A-----A--CTCTTGCAGATATTGGCGGCACCAACTCCAGTACCGATGTGGTTGAAAATATACTCAAG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
CTATGATGCCACCTACCATACGATTGTCAATGATGCCATACGCACGCCAGGTTTG-AT-------ATATGAAAA---G-CAAGTC--GGTGTTGAATTTTGAATGTCAATTC-CAAGCTGCCTTATTTGGAAT---------------------------------TTGGTTCAATTCTG--C----------ACAGGCCTATTCAACTTT----ATAA----------------------AA---CTC--------GATATTTTATAACAATTTCTTTC-----CTCCCCATATAGATCTGGGCGGCACGAACAGCAGCACGGACGTAGTTGAGAACATACTCAAGSizeHit CountTotal NormTotalM027
Male-body
M028
Head
M047
Female-body
M061
Embryo
SRR060654
Ovary
SRR060655
Testis
SRR060656
Ovary
SRR060657
Testis
SRR060658
Ovary
SRR060659
Testis
SRR060660
Ovary
SRR060661
Embryo
SRR060662
Embryo
SRR060663
Embryo
SRR060664
Male-body
SRR060665
Female-body
SRR060666
Male-body
SRR060667
Female-body
SRR060668
Male-body
SRR060669
Female-body
SRR060670
Testis
SRR060671
Male-body
SRR060672
Female-body
SRR060673
Ovary
SRR060674
Ovary
SRR060675
Ovary
SRR060676
Ovary
SRR060677
Ovary
SRR060678
Testis
SRR060679
Testis
SRR060680
Testis
SRR060681
Testis
SRR060682
Embryo
SRR060683
Testis
SRR060684
Embryo
SRR060685
Embryo
SRR060686
Embryo
SRR060687
Embryo
SRR060688
Ovary
SRR060689
Testis
SRR1106712
embryo_0-2h
SRR1106713
embryo_0-2h
SRR1106714
embryo_2-4h
SRR1106715
embryo_4-6h
SRR1106716
embryo_4-6h
SRR1106717
embryo_6-8h
SRR1106718
embryo_6-8h
SRR1106719
embryo_8-10h
SRR1106720
embryo_8-10h
SRR1106721
embryo_10-12h
SRR1106722
embryo_10-12h
SRR1106723
embryo_12-14h
SRR1106724
embryo_12-14h
SRR1106725
embryo_14-16h
SRR1106726
embryo_14-16h
SRR1106727
larvae
SRR1106728
larvae
SRR1106729
mixed whole adult body
SRR1106730
embryo_16-30h
V047
Embryo
V053
Head
V116
Male-body
GSM1528803
follicle cells
.................................................................................................................................................................................................................................................................................................................GGCACGAACAGCAGCACGGAC.....................2112.002000100000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................AGCAGCACGGACGTAGTTGAGAACA........2512.002010000000000000000000000000000000000000000000000000000000000100
..........................................................................................................................................................................................................................................................................................................................AGCAGCACGGACGTAGTTGAGAAC.........2411.001010000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................AGATCTGGGCGGCACGAACAGCA.............................2311.001000000000000000000000010000000000000000000000000000000000000000
.............TACCATACGATTGTCAATGATGCCAT....................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................AGCACGGACGTAGTTGAGAA..........2011.001010000000000000000000000000000000000000000000000000000000000000
....GATGCCACCTACCATACGATT..................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................AGATCTGGGCGGCACGAAC.................................1911.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................AGCACGGACGTAGTTGAG............1811.001010000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................CAGCAGCACGGACGTAGTTGAGAACA........2611.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................GCACGGACGTAGTTGAGA...........1811.001100000000000000000000000000000000000000000000000000000000000000
....GATGCCACCTACCATACGATTGTCA..............................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
................CATACGATTGTCAATGAT.........................................................................................................................................................................................................................................................................................................................1811.001010000000000000000000000000000000000000000000000000000000000000
.............TACCATACGATTGTCAATGATGCCATA...................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................TCTGGGCGGCACGAACAGCAGCA..........................2311.001000000000000000000000000000000000000000000000000000000000001000
........CCACCTACCATACGATTGTCA..............................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
..................TACGATTGTCAATGATGCCATACGCA...............................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
.............TACCATACGATTGTCAATGATGCC......................................................................................................................................................................................................................................................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
..................TACGATTGTCAATGATGCCA.....................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................GAACAGCAGCACGGACGTAGTTGAGA...........2611.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................GCAGCACGGACGTAGTTGA.............1911.001000000000000000000000000000000000000000000000000000000000000100
.............................................................................................................................................................................................................................................................................................................GGGCGGCACGAACAGCAGCACGGA......................2411.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................AGCACGGACGTAGTTGAGAACATACTCA..2811.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................CAGCACGGACGTAGTTGA.............1811.001000000000000000001000000000000000000000000000000000000000000000
..........................TCAATGATGCCATACGCACGCC...........................................................................................................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................AGATCTGGGCGGCACGAACAGCAG............................2411.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................GAACAGCAGCACGGACGTAGTTGAGAA..........2711.001010000000000000000000000000000000000000000000000000000000000000
..................TACGATTGTCAATGATGCC......................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................GAACAGCAGCACGGACGT...................1811.001000000000000000100000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................AACAGCAGCACGGACGTAGTTGAGA...........2511.001100000000000000000000000000000000000000000000000000000000000000
..ATGATGCCACCTACCATACG.....................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..............ACCATACGATTGTCAATGAT.........................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................................................................................AACAGCAGCACGGACGTAGTTGAGAAC.........2711.001100000000000000000000000000000000000000000000000000000000000000
droMoj3
CTATGACGCTACCTACCAGACAATTGTTAACGATGCTATTCGCACGCCAGGTTTG-TT---------GAG-C-----------------------------------------------------------ATGT----GTGAACATGAGTTCCCT---------------------TTACACATAGACGTCGATTTTCATATTTAACAC------ATA----------------------TATATT-----------------------TAACTT---G-----T-TTCCTTGTAGATCTCGGCGGCAATCACAGCAGCACCGATGTGGTTGAAAACATTCTCAAGSizeHit CountTotal NormTotalM046
Female-body
V041
Embryo
V049
Head
V056
Head
M060
Embryo
V110
Male-body
................CAGACAATTGTTAACGATGCT......................................................................................................................................................................................................................................................................................................................2111.001100000
......CGCTACCTACCAGACAATTGTTAAC............................................................................................................................................................................................................................................................................................................................2511.001100000
.........................................................................................................................................................................................................................................................................................................................CAGCAGCACCGATGTGGT................1811.001100000
.......................................................................................................................................................................................................................................................................................................................CACAGCAGCACCGATGTGGTTGAA............2411.001100000
......................ATTGTTAACGATGCTATTCG.................................................................................................................................................................................................................................................................................................................2011.001100000
.......................TTGTTAACGATGCTATTCGCA...............................................................................................................................................................................................................................................................................................................2111.001100000
CTATGACGCTACCTACCAGACAATT..................................................................................................................................................................................................................................................................................................................................2511.001100000
...........................................................................................................................................................................................................................................................................................................................GCAGCACCGATGTGGTTGAAA...........2111.001000001
droGri2
CCATGATGCCACCTATCAGACTATTGTTAAAGATGCCATACGCACGCCAGGTAAT-AT-------TTATC-T-----C---------C-------------------------CAAGTTGATTTGTTCTGAATGCAGCAGTAAATATGAATCTTAAATTTGTTTCTTTATTTCAATTC---------------------AATATAAATAGA-ATATAAA----------------------TCATTATC---------------------CTTAAA---ACTTTGT--ATATTTTAGATATTGGAGGCGTAAACAGCAGCACTGATGTCGTTGAAAACATACTCAAASizeHit CountTotal NormTotalM041
Female-body
V109
Male-body
No Reads
droWil2
CTATGATGCCACCTATCAGACAATTGTAAAAGATGCCATACGCACACCCGGTAGG-AA-------TGATT-C-----C---------T-----------------------------------------------------------------------------------------------------------------ATATAACATT----TTACATTATCTGATCACCATCT---TATCTAATTGTTATATT-------------TTCCAT---G-----T-TTATATACAGATTTGGGTGGCAATCATTCGAGCACCGATGTTGTTGAGAATATACTCAAASizeHit CountTotal NormTotalM020
Head
M045
Female-body
V117
Male-body
V118
Embryo
V119
Head
....................................................................................................................................................................................................................................................................................................................AATCATTCGAGCACCGATGTTGTTGA.............2611.00101000
........................................................................................................................................................................................................................................................................................................................ATTCGAGCACCGATGTTGTTGA.............2211.00100100
........................................................................................................................................................................................................................................................................................................................ATTCGAGCACCGATGTTGTTGAGAAT.........2611.00100100
......................................................................................................................................................................................................................................................................................................................................GTTGTTGAGAATATACTCAAA2111.00100010
........................................................................................................................................................................................................................................................................................................GATTTGGGTGGCAATCATTCGAGCACC........................2711.00101000
.........CACCTATCAGACAATTGTAAA.............................................................................................................................................................................................................................................................................................................................2111.00100010
............................................................................................................................................................................................................................................................................................................TGGGTGGCAATCATTCGAGCACCGA......................2511.00101000
............CTATCAGACAATTGTAAAAGATGC.......................................................................................................................................................................................................................................................................................................................2411.00100010
dp5
CTACGAGGCCACCTATCAGACCATTTGCAATGATGCCATCCGCACACCAGGTACG-CGCGCCAAC------TAATTGCTTAAG--TTT-------------------------GGT-----------------------------------------------------------------------------TT-TATT-----------------------------------------------TA---------------------ATCGAA---A-----T--ATTTTACAGATCTGGGCGGCAACCACTCCAGTACCGATGTTGTTGAGAATATACTCAAASizeHit CountTotal NormTotalM022
Male-body
M040
Female-body
M059
Embryo
M062
Head
V043
Embryo
V051
Head
V112
Male-body
SRR902010
Ovary
SRR902011
Testis
SRR902012
CNS imaginal disc
..................GACCATTTGCAATGATGCC......................................................................................................................................................................................................................................................................................................................1912.0020110000000
..................................................................................................................................................................................................................................................................................................................GCAACCACTCCAGTACCGATG....................2111.0010100000000
...................ACCATTTGCAATGATGCC......................................................................................................................................................................................................................................................................................................................1811.0010100000000
....GAGGCCACCTATCAGACCATTTGCA..............................................................................................................................................................................................................................................................................................................................2511.0010000000010
......................ATTTGCAATGATGCCATCCG.................................................................................................................................................................................................................................................................................................................2011.0010000010000
........................................................................................................................................................................................................................................................................................................GATCTGGGCGGCAACCACTCCA.............................2211.0010100000000
......................................................................................................................................................................................................................................................................................................CAGATCTGGGCGGCAACCAC.................................2011.0010100000000
..................GACCATTTGCAATGATGCCATCCGCA...............................................................................................................................................................................................................................................................................................................2611.0010100000000
...........................................................................................................................................................................................................................................................................................................CTGGGCGGCAACCACTCCA.............................1911.0010100000000
.............TATCAGACCATTTGCAATGA..........................................................................................................................................................................................................................................................................................................................2011.0010001000000
....................................................................................................................................................................................................................................................................................................................AACCACTCCAGTACCGATGT...................2011.0010000100000
........................................................................................................................................................................................................................................................................................................GATCTGGGCGGCAACCACT................................1911.0010100000000
.......................TTTGCAATGATGCCATCCGCACA.............................................................................................................................................................................................................................................................................................................2311.0010100000000
......GGCCACCTATCAGACCATTTGCAAT............................................................................................................................................................................................................................................................................................................................2511.0010100000000
.........................................................................................................................................................................................................................................................................................................ATCTGGGCGGCAACCACTCC..............................2011.0010100000000
..................GACCATTTGCAATGATGCCA.....................................................................................................................................................................................................................................................................................................................2011.0010100000000
.................AGACCATTTGCAATGATGCC......................................................................................................................................................................................................................................................................................................................2011.0010001000000
...........................................................................................................................................................................................................................................................................................................................CCAGTACCGATGTTGTTGAG............2011.0010000010000
........................................................................................................................................................................................................................................................................................................................ACTCCAGTACCGATGTTGTTGAG............2311.0010000010000
........................................................................................................................................................................................................................................................................................................GATCTGGGCGGCAACCACTC...............................2011.0010100000000
..................................................................................................................................................................................................................................................................................................................................CGATGTTGTTGAGAATATACTCAAA2511.0010000001000
........................TTGCAATGATGCCATCCGCACA.............................................................................................................................................................................................................................................................................................................2211.0010100000000
........................................................................................................................................................................................................................................................................................................GATCTGGGCGGCAACCACTCCAGTACC........................2711.0010100000000
...............................................................................................................................................................................................................................................................................................................................TACCGATGTTGTTGAGAATATACTCAAA2811.0010100000000
droPer2
CTACGAGGCCACCTATCAGACCATTTGCAATGATGCCATCCGCACACCAGGTACG-CGCGCCAAC------TAATTGCTTAAG--TTT-------------------------GGT-----------------------------------------------------------------------------TT-TATT-----------------------------------------------TA---------------------ATCGTA---A-----C--ATCTTACAGATCTGGGCGGCAACCACTCCAGTACCGATGTTGTTGAGAATATACTCAAASizeHit CountTotal NormTotalM021
Embryo
M042
Female-body
V042
Embryo
V050
Head
V057
Head
V111
Male-body
..............................................................................................................................................................................................................................................................................................................................GTACCGATGTTGTTGAGAA..........1912.002000002
..............................................................................................................................................................................................................................................................................................................................GTACCGATGTTGTTGAGAATA........2112.002000002
...................................................................................................................................................................................................................................................................................................................................GATGTTGTTGAGAATATACTCAAA2411.001000001
........................................................................................................................................................................................................................................................................................................GATCTGGGCGGCAACCAC.................................1811.001010000
..............................................................................................................................................................................................................................................................................................................................GTACCGATGTTGTTGAGAAT.........2011.001000001
..................................................................................................................................................................................................................................................................................................................................CGATGTTGTTGAGAATATACT....2111.001010000
........................................................................................................................................................................................................................................................................................................................ACTCCAGTACCGATGTTGTT...............2011.001000001
..........................................................................................................................................................................................................................................................................................................................TCCAGTACCGATGTTGTTG..............1911.001000001
........................................................................................................................................................................................................................................................................................................GATCTGGGCGGCAACCACTC...............................2011.001010000
.............................................................................................................................................................................................................................................................................................................................AGTACCGATGTTGTTGAGAA..........2011.001000001
...................................................................................................................................................................................................................................................................................................................................GATGTTGTTGAGAATATACT....2011.001000001
.............................................................................................................................................................................................................................................................................................................................AGTACCGATGTTGTTGAGAAT.........2111.001000001
.......................................................................................................................................................................................................................................................................................................AGATCTGGGCGGCAACCA..................................1811.001010000
...........................................................................................................................................................................................................................................................................................................................CCAGTACCGATGTTGTTGAGAA..........2211.001000001
droAna3
TCAAGATGCCACCTACCAGACCATCGTCGAAGATGCCATTCGTACACCTGGTAAA-CC-A-----CAAAC-C-----A---------T-------------------------GCA-----------------------------------------------------------------------------AT-CAAGCACCAATCC-------ACA----------------------TCTATATC---------------------GTAT-A---C-----T--ATCTTACAGATCTGGGCGGTAACCACTCCAGCACTGATGTTGTTGAGAACATACTCAAASizeHit CountTotal NormTotalM044
Female-body
M058
Embryo
V039
Embryo
V055
Head
V105
Male-body
V106
Head
..................GACCATCGTCGAAGATGCCATT...................................................................................................................................................................................................................................................................................................................2221.002000020
..................GACCATCGTCGAAGATGCCATTCGTAC..............................................................................................................................................................................................................................................................................................................2721.002200000
.............................AAGATGCCATTCGTACACC...........................................................................................................................................................................................................................................................................................................1921.002000002
...........................................................................................................................................................................................................................................................................................................................CCAGCACTGATGTTGTTGAGAA..........2221.002000002
.........................GTCGAAGATGCCATTCGTACA.............................................................................................................................................................................................................................................................................................................2121.002000011
............CTACCAGACCATCGTCGAAGATGCC......................................................................................................................................................................................................................................................................................................................2521.002000002
..............ACCAGACCATCGTCGAAGATGCC......................................................................................................................................................................................................................................................................................................................2321.002000002
........................................................................................................................................................................................................................................................................................................GATCTGGGCGGTAACCACTC...............................2020.501100000
......TGCCACCTACCAGACCATCG.................................................................................................................................................................................................................................................................................................................................2020.501100000
.........CACCTACCAGACCATCGTCGAAGATGCC......................................................................................................................................................................................................................................................................................................................2820.501100000
...AGATGCCACCTACCAGACCATCGTCGA.............................................................................................................................................................................................................................................................................................................................2720.501100000
....................................................................................................................................................................................................................................................................................................................................ATGTTGTTGAGAACATACTCA..2120.501000010
........................................................................................................................................................................................................................................................................................................GATCTGGGCGGTAACCACTCC..............................2120.501100000
.............TACCAGACCATCGTCGAAGATGCC......................................................................................................................................................................................................................................................................................................................2420.501000001
...............................................................................................................................................................................................................................................................................................................................CACTGATGTTGTTGAGAACA........2020.501000010
..............ACCAGACCATCGTCGAAGATG........................................................................................................................................................................................................................................................................................................................2120.501000001
..............................................................................................................................................................................................................................................................................................................................GCACTGATGTTGTTGAGAACATACT....2520.501000001
........................................................................................................................................................................................................................................................................................................................ACTCCAGCACTGATGTTGTTGAG............2320.501000001
..................GACCATCGTCGAAGATGCCATTCGTACA.............................................................................................................................................................................................................................................................................................................2820.501000001
..................GACCATCGTCGAAGATGCC......................................................................................................................................................................................................................................................................................................................1920.501100000
............................GAAGATGCCATTCGTACACCTG.........................................................................................................................................................................................................................................................................................................2220.501100000
....................CCATCGTCGAAGATGCCATTCGTACACCT..........................................................................................................................................................................................................................................................................................................2920.501000010
..........................TCGAAGATGCCATTCGTACA.............................................................................................................................................................................................................................................................................................................2020.501000010
.......................TCGTCGAAGATGCCATTCGTACA.............................................................................................................................................................................................................................................................................................................2320.501000010
........................................................................................................................................................................................................................................................................................................GATCTGGGCGGTAACCACTCCAGCACT........................2720.501100000
..........ACCTACCAGACCATCGTCGAAGA..........................................................................................................................................................................................................................................................................................................................2320.501000001
..................GACCATCGTCGAAGATGCCA.....................................................................................................................................................................................................................................................................................................................2020.501000001
..AAGATGCCACCTACCAGACCATCGTCGA.............................................................................................................................................................................................................................................................................................................................2820.501000001
.............TACCAGACCATCGTCGAAGA..........................................................................................................................................................................................................................................................................................................................2020.501000100
...............CCAGACCATCGTCGAAGATGC.......................................................................................................................................................................................................................................................................................................................2120.501000010
..................GACCATCGTCGAAGATGCCATTC..................................................................................................................................................................................................................................................................................................................2320.501000010
........................................................................................................................................................................................................................................................................................................................ACTCCAGCACTGATGTTGTTG..............2120.501000010
....GATGCCACCTACCAGACCATCGTCGAA............................................................................................................................................................................................................................................................................................................................2720.501100000
..............................................................................................................................................................................................................................................................................................................................GCACTGATGTTGTTGAGAAC.........2020.501010000
........................................................................................................................................................................................................................................................................................................GATCTGGGCGGTAACCACTCCA.............................2220.501100000
.......GCCACCTACCAGACCATCGTC...............................................................................................................................................................................................................................................................................................................................2120.501100000
.............TACCAGACCATCGTCGAAGATGCCATT...................................................................................................................................................................................................................................................................................................................2720.501000001
.....................CATCGTCGAAGATGCCATTCGTACACC...........................................................................................................................................................................................................................................................................................................2720.501000010
............................GAAGATGCCATTCGTACA.............................................................................................................................................................................................................................................................................................................1820.501100000
droBip1
TCATGATGCCACCTACCAGACCATCGTCGACGATGCCATTCGCACACCTGGTAAA-CA-------ATATT-------------------------------------------GCA-------------------------------------------------------------------------------------ACCAAACACCAATCCACA-T--------------CTATATCGTTGTTT---------------------ATATTA---T-----C--TTTTTACAGATCTGGGCGGTAACCACTCAAGCACTGATGTTGTTGAGAACATACTCAAASizeHit CountTotal NormTotal
No Reads
droKik1
CCAGGAGGCTGTCTACCAGACCATTGTCGACGATGCCATTCGCACCCCAGGTAAATAT-------CGATC-T-----C-TAAG--CCT-------------------------GCT-----------------------------------------------------------------------------TT-TCT----------------ATGC----------------------CTTTTATC---------------------GTTTTA---T-----T--CCCCTACAGATCTGGGCGGCACCCACTCCAGTACCGACGTTGTTCAGAATATACTCAAGSizeHit CountTotal NormTotal
No Reads
droFic1
CCAGGAGGCCACCTACCAGACCATCGTCAACGATGCCATTCGCACGCCAGGTGAT-CA-------TGATC-------C---------C-------------------------GTA-----------------------------------------------------------------------------GATTTCTCACCCTGCAGA----ATAA----------------------CTTATTTA---------------------ATATTC---G-----T--ATCTTGCAGATATTGGCGGCACCCACTCCAGTACCGATGTGGTTGAAAACATACTCAAGSizeHit CountTotal NormTotal
No Reads
droEle1
CCAGGAGGCAGTCTACCAGACCATTGTCAACGATGCCATTCGCACGCCAGGTCAA-TC-------CGATT-A-----G---------T-------------------------AAA-----------------------------------------------------------------------------GC-TTTTCACCCATCAAA----ACTA----------------------TTAATATC-----------------------CACT---G-----T--TTCTTACAGATATTGGAGGCAACCACTCCAGCACCGATGTCGTTGAAAACATACTCAAGSizeHit CountTotal NormTotal
No Reads
droRho1
CCAGGAGGCTGTCTACCAGACCATTGTCAACGATGCCATTCGCACGCCAGGTGAA-CC-------CGAAC-A-----G---------C-------------------------GTA-----------------------------------------------------------------------------GTTTTTTTACACAGCAGA----ATCA----------------------TTTATATA---------------------ATCTCC---G-----T--TGTTTACAGATGTTGGAGGCACCCACTCTAGTACCGATGTGGTTCAAAACATACTCAAGSizeHit CountTotal NormTotal
No Reads
droBia1
CCAGGAGGCCGTCTACCAGACCATTGTCAACGATGCCATTCGCACGCCAGGTGAT-TA-------TCATC-C-----T---------G------------------------CAAA-----------------------------------------------------------------------------GCATTCTTACCGAACGGA----AGCA----------------------CTTATATC---------------------ACCTTT---G-----T--GTCTTCCAGATGTTGGCGGCACCCACTCCAGTACCGATGTGGTTGAGAACATACTCAAGSizeHit CountTotal NormTotal
No Reads
droTak1
CCAGGAGGCCGTCTACCAGACCATTGTCAACGATGCCATTCGCACGCCAGGTGGG-GA-------TCA--------------------------------------------------------------------------------------------------------------------------------TTCTTATTTACCAAA----ATCA----------------------CCTATATC---------------------ATCCTC---C-----TTTCCTCCACAGATGTCGGCGGCAGCCACTCCAGTACCGATGTGGTCGAAAACATACTCAAGSizeHit CountTotal NormTotal
No Reads
droEug1
CCAGGAGGCTGTCTACCAGACCATTGTCAACGATGCCATTCGCACGCCTGGTGAT-TA-------TTAAC-C-----C---------C-------------------------GTG-----------------------------------------------------------------------------ACTTGCTTACCCAACAGA----ATCA----------------------CATATATC---------------------ATCTCT---G-----T--TTCTTCTAGATATTGGCGGCACCCACTCCAGTACTGATGTGGTTGAAAACATACTCAAGSizeHit CountTotal NormTotal
No Reads
dm3
TCAGGAGGCCGTCTACCAGACCATTGTCAACGATGCCATTCGCACGCCAGGTGAT-CA-------CGTCT-C-----T---------C-------------------------GTA-----------------------------------------------------------------------------GT-TATTCAATAAACAGA----ATCA----------------------CCTTTATC---------------------ATCTAA---A-----T--CTCTTACAGATATTGGCGGCACCAACTCCAGTACCGATGTGGTTGAGAATATACTCAAGSizeHit CountTotal NormTotalGSM154618
Ovary
GSM154620
Ovary
GSM154621
Ovary
GSM154622
Ovary
GSM180328
Head
GSM180329
Mixed-body
GSM180330
Embryo
GSM180331
Embryo
GSM180332
Embryo
GSM180333
Embryo
GSM180334
Larvae
GSM180335
Disc
GSM180336
Pupae
GSM180337
S2
GSM231091
Ovary
GSM239041
Head
GSM239050
Head
GSM239051
S2
GSM239052
S2
GSM246084
Head
GSM266765
S2
GSM280082
Ovary
GSM280083
Ovary
GSM280084
Ovary
GSM280085
Testis
GSM280086
Ovary
GSM280087
S2-NP
GSM280088
S2-NP
GSM312995
Head
GSM313160
Head
GSM313161
Head
GSM313162
Head
GSM313163
Head
GSM313164
Head
GSM313165
Head
GSM343287
Embryo
GSM379050
Ovary
GSM379051
Ovary
GSM379052
Ovary
GSM379053
Ovary
GSM379054
Ovary
GSM379055
Ovary
GSM379056
Ovary
GSM379057
Ovary
GSM379058
Ovary
GSM379059
Ovary
GSM379060
Ovary
GSM379061
Ovary
GSM379062
Ovary
GSM379063
Ovary
GSM379064
Ovary
GSM379065
Ovary
GSM379066
Ovary
GSM379067
Ovary
GSM424739
S2
GSM424740
S2
GSM424741
S2
GSM467729
Female-body
GSM467730
Female-body
GSM467731
Female-body
M002
CS
M003
Male-body
M004
Male-body
M005
ML-DmD32
M006
ML-DmD32
M029
OSC
M030
OSC
M031
OSC
M032
S2-R+
M033
S2-R+
M034
S2-R+
M035
S2-R+
M036
S2-R+
M037
S2-R+
M038
S2-R+
M039
S2-R+
M048
S2-R+
OSS2
OSS
OSS6
OSS
OSS7
OSS
OSS8
OSS
S1
Head
S10
Embryo
S11
Embryo
S12
Embryo
S13
Embryo
S14
Embryo
S15
S2-GMR
S16
Kc
S17
Larvae
S18
Larvae
S19
Pupae
S2
Head
S20
Pupae
S21
Disc
S22
Head
S23
Female-body
S24
Male-body
S25
Larvae
S26
Larvae
S27
Pupae
S28
Pupae
S29
Head
S3
Male-body
S30
S2-GMR
S31
S2
S32
S2
S33
Kc
S34
Kc
S35
Kc
S4
Female-body
S5
Disc
S6
Embryo
S7
Embryo
S8
S2
S9
Embryo
SRR001337
Head
SRR001338
Head
SRR001339
Head
SRR001340
Head
SRR001341
Head
SRR001342
Head
SRR001343
Head
SRR001344
Head
SRR001345
Head
SRR001346
Head
SRR001347
Head
SRR001348
Head
SRR001349
Head
SRR001664
Head
SRR010951
Ovary
SRR010952
Ovary
SRR010953
Ovary
SRR010954
Ovary
SRR010955
Ovary
SRR010956
Ovary
SRR010957
Ovary
SRR010958
Ovary
SRR010959
Ovary
SRR010960
Ovary
SRR014268
Embryo
SRR014269
Embryo
SRR014270
Embryo
SRR014271
Embryo
SRR014272
Embryo
SRR014273
Ovary
SRR014274
Ovary
SRR014275
Ovary
SRR014276
Ovary
SRR014277
Ovary
SRR014278
Ovary
SRR014279
Ovary
SRR014280
Ovary
SRR014281
Ovary
SRR014282
Ovary
SRR023197
S2
SRR023399
S2
SRR023400
S2
SRR023402
S2
SRR023407
S2
SRR029028
S2
SRR029029
S2
SRR029030
S2
SRR029031
S2
SRR029032
S2
SRR029033
S2
SRR029608
Head
SRR029633
Head
SRR030145
gb3
SRR031692
Head
SRR031693
Head
SRR031694
Head
SRR031696
Head
SRR031697
Head
SRR031698
Head
SRR031699
Head
SRR031700
Head
SRR031701
Head
SRR031702
Head
SRR031703
Head
SRR031704
Head
SRR032092
S2
SRR032093
S2
SRR032094
S2
SRR032095
S2-NP
SRR032096
S2-NP
SRR032152
Head
SRR060643
Testis
SRR060644
Ovary
SRR060645
Testis
SRR060646
Ovary
SRR060647
Ovary
SRR060648
Ovary
SRR060649
Ovary
SRR060650
Testis
SRR060651
Ovary
SRR060652
Testis
SRR060653
Ovary
SRR065151
Ovary
SRR065152
Ovary
SRR065153
Ovary
SRR065154
Ovary
SRR065155
Ovary
SRR065800
Ovary
SRR065801
Ovary
SRR065802
Ovary
SRR065803
Ovary
SRR065804
Ovary
SRR065805
Ovary
SRR065806
Ovary
SRR065807
Ovary
SRR097865
S2-NP
SRR097866
S2-NP
SRR097867
S2-NP
SRR298536
Ovary
SRR298537
Ovary
SRR298711
Ovary
SRR298712
Ovary
SRR317110
Ovary
SRR317111
Ovary
SRR317112
Ovary
SRR317113
Ovary
SRR317114
Ovary
SRR317115
Ovary
SRR317116
Ovary
SRR317117
Ovary
SRR341115
S2
SRR341116
S2
SRR341117
S2
SRR341118
S2
SRR351332
Mixed-body
SRR351333
Mixed-body
T004
OSC
T005
CME-L1
V001
Embryo
V002
Embryo
V003
S2
V006
Female-body
V007
Head
V008
S2
V009
CME-L1
V010
ML-DmD20-C5
V011
Sg4
V012
Male-body
V013
Head
V014
DTT
V015
DreRFHV
V018
Kc167
V019
GM2
V020
S2-R+
V021
ML-DmD21
V022
ML-DmD32
V023
Head
V024
Kc167
V025
S2-R+
V026
1182-2H
V027
ML-DmD21
V028
CME-W1-Cl.8+
V029
ML-DmD9
V030
ML-DmD8
V031
GM2
V032
S1
V033
CME-W1-Cl.8+
V034
ML-DmD16-C3
V035
ML-DmD32
V036
ML-DmD20-C5
V037
S2
V038
S2
V063
Ovary
V0632
Ovary
V064
Ovary
V0642
Ovary
V065
Ovary
V0652
Ovary
V066
Ovary
V0662
Ovary
V067
S2-NP
V073
mbn2
V074
S3
V075
ML-DmBG1-C1
V076
ML-DmBG3-C2
V077
Head
V078
Head
V079
Head
V080
Head
V081
Embryo
V082
Embryo
V083
Male-body
V084
Female-body
V085
CME-W2
V086
Female-body
V088
Ovary
V0882
Ovary
V089
Ovary
V0892
Ovary
V090
Male-body
V091
fGS/OSS
V092
Male-body
V093
Male-body
V094
S2-R+
V095
S2-R+
V096
Ovary
V097
Ovary
V098
Ovary
V125
ML-DmD9
V126
CME-L1
V127
G2
V128
S3
V129
ML-DmBG1-C1
V130
ML-DmBG3-C2
V131
ML-DmD16-C3
V132
ML-DmD32
V133
Sg4
V134
ML-DmD8
V135
CME-W2
V136
Male-body
V137
Head
V138
Male-body
V139
Female-body
V140
Female-body
V141
Female-body
V142
Female-body
V144
OSC
V145
S2
V146
S1
V147
1182-2H
V148
mbn2
GSM1528798
follicle cells
..AGGAGGCCGTCTACCAGACCATTGTC...............................................................................................................................................................................................................................................................................................................................26117.00170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000056501000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GACCATTGTCAACGATGCCATTCGCA...............................................................................................................................................................................................................................................................................................................2619.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500010000000020000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GACCATTGTCAACGATGCCA.....................................................................................................................................................................................................................................................................................................................2018.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002200000000000000100200000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..AGGAGGCCGTCTACCAGACC.....................................................................................................................................................................................................................................................................................................................................2017.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..................GACCATTGTCAACGATGCC......................................................................................................................................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GGAGGCCGTCTACCAGACC.....................................................................................................................................................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................AGTACCGATGTGGTTGAGAATAT.......2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TACCAGACCATTGTCAACGATGCCA.....................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................GATGTGGTTGAGAATATACT....2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000
..................GACCATTGTCAACGATGCCATTCGCAC..............................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................GATGTGGTTGAGAATATACTCA..2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GGAGGCCGTCTACCAGACCA....................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................CAACTCCAGTACCGATGTGGT................2112.0020000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GACCATTGTCAACGATGCCATT...................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................CCAGTACCGATGTGGTTGAGA...........2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................CGATGTGGTTGAGAATATACTC...2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................ACTCCAGTACCGATGTGGTTGA.............2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..AGGAGGCCGTCTACCAGACCAT...................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...GGAGGCCGTCTACCAGACCATTGTCA..............................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................GCACCAACTCCAGTACCGATGTG..................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................TCCAGTACCGATGTGGTTGAGAAT.........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AGACCATTGTCAACGATGCCAT....................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................AGTACCGATGTGGTTGAGAATATAC.....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................TGGCGGCACCAACTCCAGTACCGATGT...................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................GTACCGATGTGGTTGAGAATATC......2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................TCCAGTACCGATGTGGTT...............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................ACGATGCCATTCGCACGCC...........................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GACCATTGTCAACGATGCCATTCG.................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................CAACGATGCCATTCGCACGCC...........................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TCAGGAGGCCGTCTACCAGACCATTGT................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................ACGATGCCATTCGCACGCA...........................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................TGTGGTTGAGAATATACT....1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..AGGAGGCCGTCTACCAGACCATTGTT...............................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................ACTCCAGTACCGATGTGGTTGAGA...........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................TGTGGTTGAGAATATACTC...1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................ATATTGGCGGCACCAACTCCAG............................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................AGTACCGATGTGGTTGAGAATATACTCAAG3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................CGATGCCATTCGCACGCCA..........................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................TGGCGGCACCAACTCCAGTAC.........................2111.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................CAGTACCGATGTGGTTGAG............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................ACGATGCCATTCGCACGCCA..........................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................TCCAGTACCGATGTGGTTGA.............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..AGGAGGCCGTCTACCAGACCATTGT................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................AGATATTGGCGGCACCAACT................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................GTACCGATGTGGTTGAGA...........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
....GAGGCCGTCTACCAGACCATTGTCA..............................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................CAACGATGCCATTCGCAC..............................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..AGGAGGCCGTCTACCAGACCATT..................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................CGGCACCAACTCCAGTACCGATGTGG.................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................AGTACCGATGTGGTTGAGAA..........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................CGATGTGGTTGAGAATATACTCA..2311.0010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................TCCAGTACCGATGTGGTTGAGAATA........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....AGGCCGTCTACCAGACCATTGTCA..............................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................ACTCCAGTACCGATGTGGTTGAGAATATAC.....3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................AACTCCAGTACCGATGTGGTTG..............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................ATGTGGTTGAGAATATACT....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................GATATTGGCGGCACCAACTCCAGTACC........................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................GCACCAACTCCAGTACCGATGT...................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................CCAGTACCGATGTGGTTGA.............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....AGGCCGTCTACCAGACCA....................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................GTACCGATGTGGTTGAGAATATACTCA..2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................ATTGTCAACGATGCCATTCGCA...............................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................AACTCCAGTACCGATGTGGTTGAG............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................ACTCCAGTACCGATGTGGTTGAGAATAT.......2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GACCATTGTCAACGATGCCATTCGCT...............................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GACCATTGTCAACGATGCCATTC..................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GGAGGCCGTCTACCAGACT.....................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................CTTACAGATATTGGCGGCAC.....................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
..................................................................................................................................................................................................................................................................................................................................CGATGTGGTTGAGAATATACT....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
TCAGGAGGCCGTCTACCAGACCAT...................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................ACCATTGTCAACGATGCCATTCGCA...............................................................................................................................................................................................................................................................................................................2511.0010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CAGGAGGCCGTCTACCAGACCATTGT................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...GGAGGCCGTCTACCAGACCATTGTCAACG...........................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................CTCCAGTACCGATGTGGTT...............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................GTACCGATGTGGTTGAGAATATACTC...2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................CTCCAGTACCGATGTGGTTGAGAATATAC.....2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................TTGGCGGCACCAACTCCA.............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GTCAACGATGCCATTCGCACGCC...........................................................................................................................................................................................................................................................................................................2311.0010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................CGGCACCAACTCCAGTACCGATGTGGT................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................TGTGGTTGAGAATATACTCA..2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TACCAGACCATTGTCAACGATGCCATT...................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................CA----------------------CCTTTATC---------------------ATCTAA---A-----T--CTCT.......................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................GATGTGGTTGAGAATATA......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
........................................................................................................................................................................................................................................................................................................GATATTGGCGGCACCAACTCCA.............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TGTCAACGATGCCATTCGCACGCCA..........................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................A----ATCA----------------------CCTTTATC---------------------ATCTAA---A-----T--CT.........................................................2311.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CTACCAGACCATTGTCAACGATGCCAT....................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................CACCAACTCCAGTACCG.......................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TACCAGACCATTGTCAACGATGCCAT....................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...GGAGGCCGTCTACCAGACCAT...................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................CCAGTACCGATGTGGTTGAGAAT.........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................CCGATGTGGTTGAGAATA........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................TCCAGTACCGATGTGGTTGAG............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
droSim2
TCAGGAGGCCGTCTACCAGACCATTGTCAACGATGCCATTCGCACGCCAGGTGAT-CA-------CGACT-C-----T---------C-------------------------GTT-----------------------------------------------------------------------------GT-TGTTCAATAAACAGA----ATCA----------------------CCTTTATC---------------------GTCTAA---A-----T--CTCTTACAGATATTGGCGGCACCAACTCCAGTACCGATGTGGTTGAGAATATACTCAAGSizeHit CountTotal NormTotalM023
Head
M024
Male-body
M025
Embryo
M053
Female-body
O001
Testis
O002
Head
SRR553485
Ovary
SRR553486
Ovary
SRR553487
Ovary
SRR553488
Ovary
SRR618934
Ovary
V044
Embryo
SRR902008
Ovary
SRR902009
Testis
SRR1275487
Male larvae
SRR1275485
Male prepupae
SRR1275483
Male prepupae
..........GTCTACCAGACCATTGTCAAC............................................................................................................................................................................................................................................................................................................................2113.00330000000000000000
............................................................................................................................................................................................................................................................................................................TTGGCGGCACCAACTCCAGTACCGA......................2512.00200000010100000000
..........GTCTACCAGACCATTGTC...............................................................................................................................................................................................................................................................................................................................1812.00200200000000000000
....................................CATTCGCACGCCAGGTGAT-CA-------CG........................................................................................................................................................................................................................................................................................2311.00100000100000000000
........................................................................................................................................................................................................................................................................................................GATATTGGCGGCACCAACT................................1911.00100000010000000000
...................................................................................................................................................................................................................................................................................................................................GATGTGGTTGAGAATA........1611.00100000000010000000
....................................................................................................................................................................................................................................................................................................................................ATGTGGTTGAGAATATACTC...2011.00101000000000000000
..................GACCATTGTCAACGATGCCA.....................................................................................................................................................................................................................................................................................................................2011.00100000100000000000
droSec2
TCAGGAAGCCGTCTACCAGACCATTGTCAACGATGCCATTCGCACGCCAGGTGAT-CA-------CAACT-C-----T---------C-------------------------GTA-----------------------------------------------------------------------------GT-TATTCAATAAACAGA----ATCA----------------------TCTTTATC---------------------ACCGAA---A-----T--CTCTTACAGATATTGGCGGCACCAACTCCAGTACCGATGTGGTTGAGAATATACTCAAGSizeHit CountTotal NormTotalM054
Female-body
V113
Male-body
V114
Embryo
V115
Head
.......................TTGTCAACGATGCCATTCG.................................................................................................................................................................................................................................................................................................................1911.0011000
..............................................................................................................................................................................................................................................................................................................................GTACCGATGTGGTTGAGAATATACT....2511.0011000
........................................................................................................................................................................................................................................................................................................................ACTCCAGTACCGATGTGGTTGAGA...........2411.0010100
.......................TTGTCAACGATGCCATTCGCAC..............................................................................................................................................................................................................................................................................................................2211.0010010
.......................................................................................................................................................................................................................................................................................................................AACTCCAGTACCGATGTGGTTGAG............2411.0010010
.........................................................................................................................................................................................................................................................................................................................CTCCAGTACCGATGTGGT................1811.0010010
...GGAAGCCGTCTACCAGACCA....................................................................................................................................................................................................................................................................................................................................2011.0011000
.......................................................................................................................................................................................................................................................................................A-----T--CTCTTACAGATATTGGCGG........................................2111.0010001
.................................................................................................................................................................................................................................................................................................................................CCGATGTGGTTGAGAATATACT....2211.0010100
droYak3
CCAGGAGGCCGTCTACCAGACCATTGTCAACGATGCCATTCGCACGCCAGGTGAT-CA-------CGACC-C-----C---------C-------------------------ATA-----------------------------------------------------------------------------GT-TATTTCATAAACAGA----ATCA----------------------ACTTTATC---------------------ATCTCA---A-----A--CTCTTGCAGATATTGGCGGCACCAACTCCAGTACCGATGTGGTTGAAAATATACTCAAGSizeHit CountTotal NormTotalM026
Head
M043
Female-body
M056
Embryo
V046
Embryo
V052
Head
V058
Head
V120
Male-body
SRR1275488
Male larvae
SRR1275486
Male prepupae
SRR1275484
Male prepupae
GSM1528802
follicle cells
......................................................................................................................................................................................................................................................................................................................CAACTCCAGTACCGATGTGGT................2111.00100000010000
.......................TTGTCAACGATGCCATTCGCA...............................................................................................................................................................................................................................................................................................................2111.00100000010000
......................ATTGTCAACGATGCCATTCGCA...............................................................................................................................................................................................................................................................................................................2211.00101000000000
.........................................................................................................................................................................................................................................................................................................................CTCCAGTACCGATGTGGTTGA.............2111.00101000000000
...............................GATGCCATTCGCACGCCAG.........................................................................................................................................................................................................................................................................................................1911.00100100000000
.....................................................................................................................................................................................................................................................................................................................CCAACTCCAGTACCGATGTG..................2011.00101000000000
.........................................................................................................................................................................................................................................................................................................ATATTGGCGGCACCAACTCCA.............................2111.00100000010000
...................................................................................................................................................................................................................................................................................................................................GATGTGGTTGAAAATATAC.....1911.00101000000000
........................................................................................................................................................................................................................................................................................................GATATTGGCGGCACCAACTCCAGT...........................2411.00100000010000
..AGGAGGCCGTCTACCAGACC.....................................................................................................................................................................................................................................................................................................................................2011.00100000010000
...................................................................................................................................................................................................................................................................................................................................GATGTGGTTGAAAATATACTC...2111.00110000000000
droEre2
CCAGGAGGCTCTCTACCAGACCATTGTCAACGATGCCATTCGCACGCCAGGTGAT-CA-------TCACA-C-----C---------C-------------------------ACA-----------------------------------------------------------------------------ATTTTCTCAATAAACAGA----AACA----------------------CCTTTATC---------------------ATCTCA---A-----A--CTCTTGCAGATATTGGCGGCACCAACTCCAGTACCGATGTGGTTGAAAATATACTCAAGSizeHit CountTotal NormTotalM055
Female-body
M057
Embryo
V060
Head
V040
Embryo
V107
Male-body
V108
Head
GSM1528801
follicle cells
.......................TTGTCAACGATGCCATTCGCACGCCA..........................................................................................................................................................................................................................................................................................................2612.0022000000
...GGAGGCTCTCTACCAGACCATTGTCA..............................................................................................................................................................................................................................................................................................................................2611.0011000000
..........................TCAACGATGCCATTCGCACGCC...........................................................................................................................................................................................................................................................................................................2211.0011000000
.................................................................................................................................................................................................................................................................................................................GGCACCAACTCCAGTACCGAC.....................2111.0010100000
.......GCTCTCTACCAGACCATTGTCAAC............................................................................................................................................................................................................................................................................................................................2411.0010100000
.........................GTCAACGATGCCATTCGCAC..............................................................................................................................................................................................................................................................................................................2011.0010100000
.................................................................................................................................................................................................................................................................................................................................CCGATGTGGTTGAAAATATACT....2211.0011000000
..........CTCTACCAGACCATTGTCAACGAT.........................................................................................................................................................................................................................................................................................................................2411.0011000000
...GGAGGCTCTCTACCAGACC.....................................................................................................................................................................................................................................................................................................................................1911.0011000000
............CTACCAGACCATTGTCAACGATG........................................................................................................................................................................................................................................................................................................................2311.0010100000
.........................................................................................................................................................................................................................................................................................................ATATTGGCGGCACCAACTCCA.............................2111.0010100000
......................ATTGTCAACGATGCCATTCGCACGCC...........................................................................................................................................................................................................................................................................................................2611.0010100000
..............................................................................................................................................................................................................................................................................................................................GTACCGATGTGGTTGAAAAT.........2011.0010000100
.......................................................................................................................................................................................................................................................................................................................AACTCCAGTACCGATGTGGTTGAAAATA........2811.0011000000
......................ATTGTCAACGATGCCATTCG.................................................................................................................................................................................................................................................................................................................2011.0011000000

Generated: 05/19/2015 at 12:58 PM