ID:

dvi_421

 Coordinate:

scaffold_12728:176900-176983 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-33.9

Flybase annnotation

intergenic

No Repeatable elements found

mature
  1. scaffold_6610:798-821 -
  2. scaffold_10308:2673-2696 -
  3. scaffold_10602:156-179 -
  4. scaffold_12027:1400-1423 -
  5. scaffold_12717:6150-6173 -
  6. scaffold_12728:508877-508900 -
  7. scaffold_12782:150866-150889 -
  8. scaffold_12799:466467-466490 -
  9. scaffold_12847:163128-163151 -
  10. scaffold_12855:10124109-10124132 -
  11. scaffold_12875:10072445-10072468 -
  12. scaffold_12882:4000-4023 -
  13. scaffold_12929:62195-62218 -
  14. scaffold_12954:724829-724852 -
  15. scaffold_12954:1171093-1171116 -
  16. scaffold_12963:13105817-13105840 -
  17. scaffold_12967:111188-111211 -
  18. scaffold_12967:588426-588449 -
  19. scaffold_12970:4032843-4032866 -
  20. scaffold_13050:126308-126331 -
  21. scaffold_290:249-272 +
  22. scaffold_477:1185-1208 +
  23. scaffold_9891:9405-9428 +
  24. scaffold_12272:39275-39298 +
  25. scaffold_12272:87868-87891 +
  26. scaffold_12723:295648-295671 +
  27. scaffold_12728:594309-594332 +
  28. scaffold_12799:20078-20101 +
  29. scaffold_12799:178579-178602 +
  30. scaffold_12815:487871-487894 +
  31. scaffold_12945:108316-108339 +
  32. scaffold_12954:1719192-1719215 +
  33. scaffold_12954:1738293-1738316 +
  34. scaffold_12954:1747396-1747419 +
  35. scaffold_13036:296779-296802 +
  36. scaffold_13045:2225771-2225794 +
  37. scaffold_13050:1821949-1821972 +
  38. scaffold_13052:1176077-1176100 +
  39. scaffold_13222:1645-1668 +
  40. scaffold_13324:1872396-1872419 +
  41. scaffold_291:239-262 +
  42. scaffold_1297:139-162 +
  43. scaffold_4923:283-306 +
  44. scaffold_9353:6219-6242 +
  45. scaffold_10411:3054-3077 +
  46. scaffold_12100:150914-150937 +
  47. scaffold_12321:7677-7700 +
  48. scaffold_12855:9431489-9431512 +
  49. scaffold_12883:4640-4663 +
  50. scaffold_12929:557894-557917 +
  51. scaffold_12932:607417-607440 +
  52. scaffold_12954:1276338-1276361 +
  53. scaffold_12963:4016252-4016275 +
  54. scaffold_13036:368039-368062 +
  55. scaffold_13036:984593-984616 +
  56. scaffold_13045:997773-997796 +
  57. scaffold_13047:2335357-2335380 +
  58. scaffold_13047:7533592-7533615 +
  59. scaffold_13050:3091982-3092005 +
  60. scaffold_13324:191711-191734 +
  61. scaffold_7131:322-345 -
  62. scaffold_8834:1418-1441 -
  63. scaffold_12528:195915-195938 -
  64. scaffold_12777:3592-3615 -
  65. scaffold_12815:401503-401526 -
  66. scaffold_12929:303524-303547 -
  67. scaffold_12929:533591-533614 -
  68. scaffold_12949:62648-62671 -
  69. scaffold_12954:396423-396446 -
  70. scaffold_12954:416574-416597 -
  71. scaffold_12958:137647-137670 -
  72. scaffold_12958:1336651-1336674 -
  73. scaffold_12958:1954575-1954598 -
  74. scaffold_12958:2095980-2096003 -
  75. scaffold_12970:828024-828047 -
  76. scaffold_13035:291-314 -
  77. scaffold_13045:238352-238375 -
  78. scaffold_13045:1080769-1080792 -
  79. scaffold_13050:1354800-1354823 -
  80. scaffold_13324:1649263-1649286 -
  81. scaffold_12848:368-391 +
  82. scaffold_12891:458596-458619 +
  83. scaffold_12970:817971-817994 +
  84. scaffold_12958:789326-789349 +
  85. scaffold_13324:251223-251246 +
  86. scaffold_13324:479743-479766 +
  87. scaffold_13324:1595788-1595811 +
  88. scaffold_589:643-666 -
  89. scaffold_632:1049-1072 -
  90. scaffold_7048:817-840 -
  91. scaffold_9406:1190-1213 -
  92. scaffold_9493:370-393 -
  93. dvi_422  scaffold_12728:174792-174815 -
  94. dvi_421  scaffold_12728:176901-176924 -
  95. scaffold_12734:227258-227281 -
  96. scaffold_12796:10479-10502 -
  97. scaffold_12875:8762443-8762466 -
  98. scaffold_12929:119492-119515 -
  99. scaffold_12954:332395-332418 -
  100. scaffold_12954:742780-742803 -
  101. scaffold_12958:396188-396211 -
  102. scaffold_13045:552728-552751 -
  103. scaffold_13045:569370-569393 -
  104. scaffold_13077:1239-1262 -
  105. scaffold_13324:775874-775897 -
  106. scaffold_13324:2073206-2073229 -
  107. scaffold_12149:3907-3930 -
  108. scaffold_12929:372192-372215 -
  109. scaffold_9681:1470-1493 +
  110. scaffold_12728:646810-646833 +
  111. scaffold_12941:353129-353152 +
  112. dvi_428  scaffold_12954:1892535-1892558 +
  113. scaffold_13045:1027639-1027662 +
  114. scaffold_13045:1034621-1034644 +
  115. scaffold_13050:3191464-3191487 +
  116. scaffold_8190:882-905 +
  117. scaffold_12601:3075-3098 +
  118. scaffold_9539:3857-3880 +
  119. scaffold_12941:342416-342439 +
  120. scaffold_12958:748026-748049 +
  121. scaffold_13045:377196-377219 +
  122. scaffold_13050:459608-459631 +
  123. scaffold_13324:257740-257763 +
star
  1. dvi_422  scaffold_12728:174837-174864 -
  2. dvi_421  scaffold_12728:176946-176973 -
  3. scaffold_12855:4968470-4968497 -

Sense Strand Reads

TTCTTGGCAATAGCAGCGATCTTGTCGCAATCACGCCCAGTGAGACCTGCACATTTAGCATGCATCATATTCTTACACAGCCAGCAATTGACAAATTGCGGCAGTGCAGAATCGTCAGCCTGCTTGAACGTGCACGGTTTCTTACAGCACGACATAATTATTAAATGCGTAAGCAAGTTGCGAG
*********************************************(((((((.(((((((.((.....(((((..(((.(((.((((((....))))))))).))).))))).....)).))).)))).))))).))...........************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR060687
9_0-2h_embryos_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060688
160_ovaries_total
 M047
female body
 SRR060685
9xArg_0-2h_embryos_total
 SRR1106713
embryo_0-2h
 SRR060676
9xArg_ovaries_total
 SRR060674
9x140_ovaries_total
 SRR060662
9x160_0-2h_embryos_total
 SRR060654
160x9_ovaries_total
 SRR060677
Argx9_ovaries_total
 SRR060678
9x140_testes_total
 SRR1106719
embryo_8-10h
 SRR060686
Argx9_0-2h_embryos_total
 SRR060675
140x9_ovaries_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060673
9_ovaries_total
 GSM1528803
follicle cells		 SRR060656
9x160_ovaries_total
 SRR060681
Argx9_testes_total
 M061
embryo
 SRR060679
140x9_testes_total
 SRR060670
9_testes_total
 SRR1106730
embryo_16-30h
 SRR060663
160_0-2h_embryos_total
 SRR1106729
mixed whole adult body
 SRR060680
 9xArg_testes_total
 SRR060659
Argentina_testes_total
 SRR060658
140_ovaries_total
 SRR060683
160_testes_total
 SRR1106712
embryo_0-2h
 SRR060655
9x160_testes_total
 SRR060665
9_females_carcasses_total
 SRR060689
160x9_testes_total
 SRR1106714
embryo_2-4h
 SRR1106717
embryo_6-8h
 SRR1106723
embryo_12-14h
 SRR1106725
embryo_14-16h
.............................................................................................................AATCGTCAGCCTGCTTGAACGTGC................................................... 24 0 20 42.10 842 754 0 0 0 0 0 0 0 59 0 0 29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......CAATAGCAGCGATCTTGTCGCAATCACG..................................................................................................................................................... 28 0 20 9.60 192 0 183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................CAGAATCGTCAGCCTGCTTGAACGTGC................................................... 27 0 20 7.20 144 0 0 0 0 0 97 0 0 0 0 0 0 47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................TGCATCATATTCTTACACAGCCAGCAAT................................................................................................ 28 0 3 7.00 21 0 6 0 2 4 0 4 0 0 0 1 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......CAATAGCAGCGATCTTGTCGCAATCA....................................................................................................................................................... 26 0 20 5.25 105 0 0 105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................AATCGTCAGCCTGCTTGAACGTGCACG................................................ 27 0 20 3.50 70 63 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CACGACATAATTATTAAATGCGTAAGC.......... 27 0 15 3.07 46 2 8 1 1 6 0 6 2 0 0 5 2 0 2 4 2 0 0 1 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0
............................................................TGCATCATATTCTTACACAGCCAGCA.................................................................................................. 26 0 4 3.00 12 0 0 0 4 0 0 2 1 0 0 3 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................AATCGTCAGCCTGCTTGAACGTGCACGG............................................... 28 0 20 2.45 49 44 0 0 0 0 0 0 0 0 3 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................TGCATCATATTCTTACACAGCCAGC................................................................................................... 25 0 4 2.25 9 0 0 0 6 1 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................TGCATCATATTCTTACACAGCCAGCAA................................................................................................. 27 0 4 2.25 9 0 0 0 2 1 0 3 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................AATCGTCAGCCTGCTTGAACGTGCA.................................................. 25 0 20 2.05 41 0 30 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................AATCGTCAGCCTGCTTGAACGTG.................................................... 23 0 20 1.85 37 0 0 0 0 0 0 0 37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......CAATAGCAGCGATCTTGTCGCA........................................................................................................................................................... 22 0 20 1.65 33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................GAATCGTCAGCCTGCTTGAACGTGC................................................... 25 0 20 1.65 33 0 0 0 0 0 0 0 0 0 33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................TCTTACAGCACGACATAATTATTAAAT.................. 27 0 20 1.35 27 11 16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................GATCTTGTCGCAATCACGCCCAGTGA............................................................................................................................................. 26 0 20 1.05 21 1 7 0 0 1 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................TGCATCATATTCTTACACAGCCA..................................................................................................... 23 0 4 1.00 4 0 0 0 0 0 0 0 1 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................AATCGTCAGCCTGCTTGAACGT..................................................... 22 0 20 0.85 17 0 0 0 0 0 0 0 0 10 6 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................TGCATCATATTCTTACACAGCCAG.................................................................................................... 24 0 4 0.75 3 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......CAATAGCAGCGATCTTGTCGCAATCACGC.................................................................................................................................................... 29 0 20 0.65 13 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......CAATAGCAGCGATCTTGTC.............................................................................................................................................................. 19 0 20 0.55 11 0 0 0 0 0 0 0 0 0 10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
TTCTTGGCAATAGCAGCGATCTTG................................................................................................................................................................ 24 0 20 0.50 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......CAATAGCAGCGATCTTGTCGCAA.......................................................................................................................................................... 23 0 20 0.45 9 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CACGACATAATTATTAAATGCGTAAGCA......... 28 0 15 0.40 6 1 1 0 0 3 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CACGACATAATTATTAAATGCGTAA............ 25 0 16 0.38 6 0 1 0 0 1 0 0 0 0 0 3 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TCGTCAGCCTGCTTGAACGTGCACGG............................................... 26 0 20 0.35 7 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................ATTCTTACACAGCCAGCAAT................................................................................................ 20 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CACGACATAATTATTAAATGCGTAAG........... 26 0 16 0.31 5 0 3 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......CAATAGCAGCGATCTTGTCGCAATC........................................................................................................................................................ 25 0 20 0.30 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................TCTTGTCGCAATCACGCCCAGTGAGACC......................................................................................................................................... 28 0 20 0.30 6 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................AATCGTCAGCATGCTTGAACGTGC................................................... 24 1 20 0.25 5 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................GCATCATATTCTTACACAGCCAGC................................................................................................... 24 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CACGACATAATTGTTATATGCGTAAGC.......... 27 2 16 0.25 4 0 1 0 0 0 0 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................GGCATCATATTCTTACACAGCCAGC................................................................................................... 25 1 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................TGCAGCATATTCTTACACAGCCAGCA.................................................................................................. 26 1 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................TGGACAAATTGCGGCA................................................................................. 16 1 20 0.25 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................TAAATGCGTAAGCAAGTTGCG.. 21 0 9 0.22 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................................TGCCTCATATTCTTACACAGCC...................................................................................................... 22 1 5 0.20 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TCGTCAGCCTGCTTGAACGTGC................................................... 22 0 20 0.20 4 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
........AATAGCAGCGATCTTGTCGCAATCACG..................................................................................................................................................... 27 0 20 0.20 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CACGACATAATTATTAAAAGCGAGAGC.......... 27 3 20 0.20 4 1 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......CAATAGCAGCGATCTTGTCG............................................................................................................................................................. 20 0 20 0.20 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......CAATAGCAGCTATCTTGTCGCAATCA....................................................................................................................................................... 26 1 20 0.20 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CACGACATAAATATTAAATGCGTAAGC.......... 27 1 15 0.20 3 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................TACGACATAATTATTAAATGCGTAAG........... 26 1 17 0.18 3 0 0 0 0 0 0 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................TGCATCATATTCTTACACAGCCATC................................................................................................... 25 1 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......CAATAGCAGCGATCTTGTCGC............................................................................................................................................................ 21 0 20 0.15 3 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........TAGCAGCGATCTTGTCGCAATCACGCCC.................................................................................................................................................. 28 0 20 0.15 3 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................CAATCGTCAGCCTGCTTGAACGTGC................................................... 25 1 20 0.15 3 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......CAATAGCAGCGATCTTGTCTCAATCA....................................................................................................................................................... 26 1 20 0.15 3 0 0 0 0 0 0 1 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................ATCGTCAGCCTGCTTGAACGTGCACG................................................ 26 0 20 0.15 3 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................TCTTGTCGCAATCACGCCCAGTGAG............................................................................................................................................ 25 0 20 0.15 3 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................AATTGTCAGCCTGCTTGAACGTGC................................................... 24 1 20 0.15 3 0 0 0 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TGCAGAATCGTCAGCCTGCTTGAACGT..................................................... 27 0 20 0.15 3 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
TTCTTGGCAATAGCAGCGATCTTGT............................................................................................................................................................... 25 0 20 0.15 3 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......CAATAGCAGCGATCTTGTCGCAATCAT...................................................................................................................................................... 27 1 20 0.15 3 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TCGTCAGCCTGCTTGAACGTGCACG................................................ 25 0 20 0.15 3 0 0 0 0 0 0 0 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................CAGACTCGTCAGCCTGCTTGAACGTGC................................................... 27 1 20 0.15 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................TGCATCATATTCTTACACAGCTAGCAAT................................................................................................ 28 1 7 0.14 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CACGACATAATTATTAAATGCGTTA............ 25 1 16 0.13 2 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................TGCATCATATTCTTACACAGCTAGCAA................................................................................................. 27 1 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................TGCATCATATTCTTACATAGCCAGCAAT................................................................................................ 28 1 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................CAGAATCGTCAGCCTGCTTGAACGTGCACGGTT............................................. 33 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0
TTCTTGGTAATAGCAGCGATCTTG................................................................................................................................................................ 24 1 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........ATAGCAGCGATCTTGTCGCAATCACGCCCAG................................................................................................................................................ 31 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................TAATTATTAAATGCGTAAGCAAGTTGC... 27 0 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......CAATAGCAGCGATCTTGTCGCAATCCCG..................................................................................................................................................... 28 1 20 0.10 2 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................GAATCGTCAGCCTGCTTGACCGTGC................................................... 25 1 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................CAGAATCGTCAGCCTGCTTGAACGGGC................................................... 27 1 20 0.10 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
..........................................................................................................CAGAATCGTCAGCCTGCTTGAACG...................................................... 24 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................ATCTTGTCGCAATCACGCCCAGTGA............................................................................................................................................. 25 0 20 0.10 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................AATCGTCAACCTGCTTGAACGTGC................................................... 24 1 20 0.10 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CACGACATAATTAGAAAATGCGTA............. 24 2 20 0.10 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................TTCTTACAGCACGACATA............................ 18 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......CAATAGCAGCGATGTTGTCGCAATCA....................................................................................................................................................... 26 1 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................AATCGTCAGCCTGCTTGAACGTT.................................................... 23 1 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................AATCGTCAGCCTGCTTGAACG...................................................... 21 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................AATCGTCAGCCTGCTTGAAC....................................................... 20 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......CAATAGCAGCGATCTTGTTGCAATC........................................................................................................................................................ 25 1 20 0.10 2 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.TCTTGGCAATAGCAGCGATCTTG................................................................................................................................................................ 23 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0
...............................................................................................TTGCGGCAGTGCAGAATCGTCAGCCTGC............................................................. 28 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................ATCAATCGTCAGCCTGCTTGAACGTGC................................................... 27 3 20 0.10 2 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CACGACATAATTATTAAATGCGTAAGCAA........ 29 0 14 0.07 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CACGACATACTTATTAAATGCGTAAGC.......... 27 1 15 0.07 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................GCACGACATAATTATTAAATGCGTAA............ 26 0 16 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CACGACATGATTATTAAATGCGTAAG........... 26 1 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CACGACATAATTATTAGATGCGTAAGC.......... 27 1 16 0.06 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CACGACATAATTGTTATATGCGTAA............ 25 2 17 0.06 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CACAACATAATTATTAAATGCGTAAGC.......... 27 1 18 0.06 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................GCCTGCTTGAACGTGCACG................................................ 19 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................AATCTTCAGCCTGCTTGAACGTGCACGG............................................... 28 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......CTATAGCAGCGATCTTGTCGCAATCACG..................................................................................................................................................... 28 1 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................GATCTTGTCGCAATCACGCCCAGTG.............................................................................................................................................. 25 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.TCTTGGCAATAGCAGCGATCTTGTCGCA........................................................................................................................................................... 28 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................TTCTTACAGCACGACATAATTATTAAA................... 27 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CACGACATAATTATTAAAT.................. 19 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......CTATAGCAGCGATCTTGTCGCAATCA....................................................................................................................................................... 26 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......CAATAGCAGAGATCTTGTCGC............................................................................................................................................................ 21 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................AATCGTCAGCCTGCATGAACGTGCA.................................................. 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........TAGCAGCGATCTTGTCGCAATCACG..................................................................................................................................................... 25 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TCGTCAGCCTGCTTGAACGTGCAC................................................. 24 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................CAACCGTCAGCCTGCTTGAACGT..................................................... 23 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......CAATAGCAGCGATCTTGTCGCAATCC....................................................................................................................................................... 26 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........ATAGCAGCGATCTTGTCGCAA.......................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................GAATCGTCAGCCTGCTTGAA........................................................ 20 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......CAATAGCAGAGATCTTGTCGCAATCA....................................................................................................................................................... 26 1 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................CAGAATCGTCAGCCTGCTTGAACGTGCACGGT.............................................. 32 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...................TCTTGTCGCAATCACGCCCAGTGA............................................................................................................................................. 24 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................AATCGTCAGCCTTCTTGAACGTGC................................................... 24 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CACGACATAATTATTAAATGCGGAAGC.......... 27 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................AGTCGTCAGCCTGCTTGAACGTGC................................................... 24 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................CTTACAGCACGACATAATTATTAAAT.................. 26 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......CCATAGCAGCGATCTTGTCGCAATCACG..................................................................................................................................................... 28 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TGCAGAATCGTCAGCCTGCTTGAACGTGC................................................... 29 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
TTCTTGGCAATAGCAGCGATCTTGTC.............................................................................................................................................................. 26 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................GAATCGTCAACCTGCTTGAACGTGC................................................... 25 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......CAATAGCAGCGTTCTTGTCGCAATCACG..................................................................................................................................................... 28 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........AATAGCAGCGATCTTGTCGCAATCAC...................................................................................................................................................... 26 0 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......CAATAGCAGCGATCTTGCCGCAATC........................................................................................................................................................ 25 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TATAATCGTCAGCCTGCTTGAACGTGCACGGTT............................................. 33 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................TTGCGGCAGTGCAGAACCGTCAGCCT............................................................... 26 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
............................................................................................................TAATCGTCAGCCTGCTTGAACG...................................................... 22 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TACAGCACGACATAATTATTAAATGCG............... 27 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................TCTTGTCGCAATCACGCCCAGTGAGA........................................................................................................................................... 26 0 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......CAATAGCAGCGATCTTGTCGCTTT......................................................................................................................................................... 24 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................AATCGTCGGCCTGCTTGCACGTGCACGG............................................... 28 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...TTGGCAATAGCAGCGATCTTGTCGC............................................................................................................................................................ 25 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................TTACAGCACGACATAATTA........................ 19 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TGCAGAATCGTCAGCCTGCTTGAACGTG.................................................... 28 0 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................ATCTTGTCGCAATCACGCC................................................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................GTCAGCCTGCTTGAACGT..................................................... 18 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................TCGCAATCACGCCCAGTGAGA........................................................................................................................................... 21 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................GAATTGTCAGCCTGCTTGAACGTGC................................................... 25 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................AATCGTCAGCCTGCTTGAACGTGCT.................................................. 25 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........AGCAGCGATCTTGTCGCAATCACGCCCAG................................................................................................................................................ 29 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................AATCGTCAGCCTGCTTGAACGTCC................................................... 24 1 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................CAAATTGCGGCAGTGCCGAATCC...................................................................... 23 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............CAGCGATCTTGTCGCAATCACG..................................................................................................................................................... 22 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........AATAGCAGCGATCTTGTCGCAATCA....................................................................................................................................................... 25 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................TTGAACGTGCACGGTTTCTTACAGCA................................... 26 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................AATCGTCAGGCTGCTTGAACGT..................................................... 22 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................GAAGCGTCAGCCTGCTTGAACGTGC................................................... 25 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................GATCTTGTCGCAATCACGCCCAGTGAG............................................................................................................................................ 27 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................ATCTTGTCGCAATCACGCCCAGTGAGAC.......................................................................................................................................... 28 0 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......AAATAGCAGCGATCTTGTCGCAA.......................................................................................................................................................... 23 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......CACTAGCAGCGATCTTGTCGCAATC........................................................................................................................................................ 25 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................GATCTTGTCTCAATCACGCCCAGTGA............................................................................................................................................. 26 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................CTTACAGCACGACATAATTATTAAA................... 25 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......CAATAGCAGCGATCTTGGCGCAAT......................................................................................................................................................... 24 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.TCTTGGCAATAGCAGCGATCT.................................................................................................................................................................. 21 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......CAATAGCAGTGATCTTGTCGCAATCACG..................................................................................................................................................... 28 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......CAATAGCCGCGATCTTGTCGCAAGC........................................................................................................................................................ 25 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......CAATAGCAGCGATCTCGTCGCAATCA....................................................................................................................................................... 26 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......CAATAGCAGCGGTCTTGTCGCAATCA....................................................................................................................................................... 26 1 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................TGCTTGAACGTGCACGGTTTCTTACAGC.................................... 28 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................TGCTTGAACGTGCACGGTTTCTTA........................................ 24 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................TTACAGCACGACATAATTATTA..................... 22 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................AATCCTCAGCCTGCTTGAACGTGC................................................... 24 1 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................TCGCAATCACGCCCAGTGAGACCTGC...................................................................................................................................... 26 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TGCAGAATCGTCAGCCTGCTTGAACG...................................................... 26 0 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......CAATAGCAGCGATCTTGTCGCAT.......................................................................................................................................................... 23 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................TACGACATAATTATTAAATGCG............... 22 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
TTCTTGGCAAGAGCAGCGATCTTGT............................................................................................................................................................... 25 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CACGACATAATTATTAAATGCGGAA............ 25 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................AATCGTCAGCCTGCTTAAACGTGC................................................... 24 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................ATCTTGTCGCAATCACGCCCAGT............................................................................................................................................... 23 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TCAATCGTCAGCCTGCTTGAACGTGCACG................................................ 29 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................AATCGTCAGCCTGCTTGAACGGGCACGG............................................... 28 1 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
TTCTTGGCAATAGCAGCGTTCTTG................................................................................................................................................................ 24 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................GCACGGTTTCTTACAGCAC.................................. 19 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................CAGAATCGTCAGCCTGCTTGCACGTGC................................................... 27 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.........ATAGCAGCGATCTTGTCGCAATCACGCCC.................................................................................................................................................. 29 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................ATCTTGTCGCAATCACGCCCAGTGAG............................................................................................................................................ 26 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...TTGGCAATAGCAGCGATCTTGTCGCAAT......................................................................................................................................................... 28 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................GAATCGTCAGCCTGCTTGAACGTGCAC................................................. 27 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......CCAATAGCAGCGATCTTGTCGCAATCACG..................................................................................................................................................... 29 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........AGCAGCGATCTTGTCGCAAT......................................................................................................................................................... 20 0 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................TTGTCGCAATCACGCCCAGTGAGACC......................................................................................................................................... 26 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................CCTGCTTGAACGTGCACGGTTTCTTCCC...................................... 28 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................AATCGTCGGCCTGCTTGAACGTGC................................................... 24 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............GCGATCTTGTCGCGATCACGCCCAGT............................................................................................................................................... 26 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................CCTGCTTGAACGTGCACGGTTTCTT......................................... 25 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................CAGAATCGTCAGCCTGCGTGAACGTGCACGGGT............................................. 33 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TCGTCAGCCTGCTTTAACGTGCACGG............................................... 26 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........AATAGCAGCGATCTTGTC.............................................................................................................................................................. 18 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................GAACCGTCAGCCTGCTTGAACGTG.................................................... 24 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........AGCAGCGATCTAGTCGCAAT......................................................................................................................................................... 20 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TGCAGAATCGTCAGCCTGCTTGAGCG...................................................... 26 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................AGAATCGTCAGCCTGCTTGAAAA...................................................... 23 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......CTATAGCAGCGATCTTGTCGCA........................................................................................................................................................... 22 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................AATCGTCAGCCTGCTTGAACGTGCCCG................................................ 27 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......CAATAGCAGCGGTCTTGTCGCAATC........................................................................................................................................................ 25 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......CATTAGCAGCGATCTTGTCGCAATCA....................................................................................................................................................... 26 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CACGACATAATTATTAAAAGCGAGA............ 25 3 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........ATAGCAGCGATCTTGTCGCA........................................................................................................................................................... 20 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................GATGTTGTCGCAATCACGCCC.................................................................................................................................................. 21 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................TGCAGAATCGTCAGCCTGCTTGCACGT..................................................... 27 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................GCACGACATAATTATTAAAAGCGAGA............ 26 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......CGATAGCAGCGATCTTGTCGCAATCA....................................................................................................................................................... 26 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........AGCAGCGATCTTGTCGCAATCACGCC................................................................................................................................................... 26 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......CAAAAGCAGCGATCTTGTCGC............................................................................................................................................................ 21 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......CAATAGCAGCTATCTTGTCGCAATC........................................................................................................................................................ 25 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................AGAATCGTCAGCCTGCTTGAACGTTCT.................................................. 27 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................CTGCTTGAACATGCACGGTTTCTT......................................... 24 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......CAATAGCAGCGATCTTGTCGCAATCAA...................................................................................................................................................... 27 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................CGTCAGCCTGCTTGAACGTGC................................................... 21 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

AAGAACCGTTATCGTCGCTAGAACAGCGTTAGTGCGGGTCACTCTGGACGTGTAAATCGTACGTAGTATAAGAATGTGTCGGTCGTTAACTGTTTAACGCCGTCACGTCTTAGCAGTCGGACGAACTTGCACGTGCCAAAGAATGTCGTGCTGTATTAATAATTTACGCATTCGTTCAACGCTC
************************************(((((((.(((((((.((.....(((((..(((.(((.((((((....))))))))).))).))))).....)).))).)))).))))).))...........********************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR060677
Argx9_ovaries_total
 SRR060676
9xArg_ovaries_total
 SRR060674
9x140_ovaries_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060656
9x160_ovaries_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060687
9_0-2h_embryos_total
 M047
female body
 SRR060685
9xArg_0-2h_embryos_total
 SRR060681
Argx9_testes_total
 SRR060673
9_ovaries_total
 SRR060654
160x9_ovaries_total
 SRR060688
160_ovaries_total
 SRR060675
140x9_ovaries_total
 SRR060682
9x140_0-2h_embryos_total
 M027
male body		 SRR060662
9x160_0-2h_embryos_total
 SRR060660
Argentina_ovaries_total
 SRR060678
9x140_testes_total
 GSM1528803
follicle cells		 SRR060658
140_ovaries_total
 SRR060679
140x9_testes_total
 SRR060655
9x160_testes_total
 SRR060680
 9xArg_testes_total
 SRR060689
160x9_testes_total
 SRR060670
9_testes_total
 SRR060683
160_testes_total
 M061
embryo
 SRR060659
Argentina_testes_total
 SRR060663
160_0-2h_embryos_total
 SRR060672
9x160_females_carcasses_total
 SRR1106713
embryo_0-2h
 V047
embryo
 SRR060657
140_testes_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060664
9_males_carcasses_total
 SRR060665
9_females_carcasses_total
 SRR060667
160_females_carcasses_total
 SRR060669
160x9_females_carcasses_total
 SRR1106715
embryo_4-6h
 V053
head
.....................................................................................................................................TGCCAAAGAATGTCGTGCTGTATT........................... 24 0 20 43.75 875 439 0 344 0 0 0 0 0 0 64 0 0 0 0 0 0 27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.............................................GGACGTGTAAATCGTACGTAGTATA.................................................................................................................. 25 0 20 33.45 669 301 0 0 88 0 150 0 0 96 17 0 0 0 0 0 0 0 12 0 0 0 0 0 0 1 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................GTGCCAAAGAATGTCGTGCTGTATT........................... 25 0 20 20.50 410 0 271 0 0 0 0 122 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................GACGTGTAAATCGTACGTAGTATA.................................................................................................................. 24 0 20 20.10 402 157 198 0 0 0 0 24 0 0 0 10 0 9 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................CGTGCCAAAGAATGTCGTGCTGTATT........................... 26 0 20 9.90 198 0 0 0 0 198 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................TGGACGTGTAAATCGTACGTAGTATA.................................................................................................................. 26 0 20 8.10 162 0 0 0 138 5 0 0 0 0 0 5 0 0 0 0 0 0 0 10 0 0 0 3 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...........................................CTGGACGTGTAAATCGTACGTAGTATA.................................................................................................................. 27 0 20 6.65 133 129 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................GCCAAAGAATGTCGTGCTGTATT........................... 23 0 20 4.80 96 0 0 0 0 0 0 0 0 0 0 38 33 0 0 21 0 0 0 0 0 0 0 0 0 3 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................CCAAAGAATGTCGTGCTGTATT........................... 22 0 20 4.30 86 0 0 69 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................GTGTAAATCGTACGTAGTATA.................................................................................................................. 21 0 20 4.25 85 64 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................GCACGTGCCAAAGAATGTCGTGCTGTATT........................... 29 0 20 4.05 81 25 30 0 0 0 0 0 0 0 0 0 4 0 21 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................GTTTAACGCCGTCACGTCTTAGCAGTC.................................................................. 27 0 20 2.70 54 2 0 0 0 0 0 0 51 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................CGTGTAAATCGTACGTAGTATA.................................................................................................................. 22 0 20 2.25 45 0 0 24 0 0 13 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TTAACGCCGTCACGTCTTAGCAGTCG................................................................. 26 0 20 2.10 42 0 28 0 2 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TGTTTAACGCCGTCACGTCTTAGCAGT................................................................... 27 0 20 1.90 38 0 0 0 33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................CGCCGTCACGTCTTAGCAGTC.................................................................. 21 0 20 1.75 35 13 0 0 0 0 3 0 0 0 0 0 0 0 0 0 15 0 2 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................CGCCGTCACGTCTTAGCAGTCG................................................................. 22 0 20 1.70 34 0 0 0 0 0 0 0 13 7 0 4 0 0 3 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................CAAAGAATGTCGTGCTGTATT........................... 21 0 20 1.30 26 0 0 0 0 0 0 0 0 2 0 0 0 16 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................CTGTTTAACGCCGTCACGTCTTAGCAGTC.................................................................. 29 0 2 1.00 2 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................ACGTGTAAATCGTACGTAGTATA.................................................................................................................. 23 0 20 1.00 20 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TGCCAAAGAATGTCGTGCTGTATTA.......................... 25 0 20 0.70 14 2 0 0 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TTAACGCCGTCACGTCTTAGCAGTC.................................................................. 25 0 20 0.70 14 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................CCGTCACGTCTTAGCAGTC.................................................................. 19 0 20 0.70 14 0 0 0 0 0 0 0 4 0 0 0 1 2 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................CGTGCCAAAGAATGTCGTGCTGTAT............................ 25 0 20 0.70 14 0 1 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 2 0 0 0 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...........................................ATGGACGTGTAAATCGTACGTAGTATA.................................................................................................................. 27 1 20 0.55 11 9 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................TCTGGACGTGTAAATCGTACGTAGTATA.................................................................................................................. 28 0 20 0.50 10 7 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................CACGTGCCAAAGAATGTCGTGCTGTATT........................... 28 0 20 0.50 10 0 0 0 0 0 0 1 0 7 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................CCCTTTAACGCCGTCACGTCTTAGCAGT................................................................... 28 2 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................TTTAACGCCGTCACGTCTTAGCAGTCG................................................................. 27 0 20 0.50 10 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TGTAAATCGTACGTAGTATA.................................................................................................................. 20 0 20 0.50 10 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................GTGCCAAAGAATGTCTTGCTGTATT........................... 25 1 20 0.45 9 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................AAAGAATGTCGTGCTGTATT........................... 20 0 20 0.40 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................ACGTGCCAAAGAATGTCGTGCTGTATT........................... 27 0 20 0.40 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 3 0 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................CCAAAGAATGTCGTGCTGTAT............................ 21 0 20 0.40 8 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................GCCGTCACGTCTTAGCAGTC.................................................................. 20 0 20 0.35 7 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................AACGCCGTCACGTCTTAGCAGTCG................................................................. 24 0 20 0.35 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................TTGCCAAAGAATGTCGTGCTGTATT........................... 25 1 20 0.35 7 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
............CGTCGCTAGAACAGCGTTAGTGCGGGT................................................................................................................................................. 27 0 20 0.35 7 0 0 0 0 0 3 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................GGACGAGTAAATCGTACGTAGTATA.................................................................................................................. 25 1 20 0.30 6 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................CGTGTAAATCGTACGTAGTAT................................................................................................................... 21 0 20 0.30 6 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................TTTAACGCCGTCACGTCTTAGCAGTC.................................................................. 26 0 20 0.30 6 0 0 0 0 0 0 0 0 0 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TGCCAAAGAATGTCGTGCTGTAT............................ 23 0 20 0.30 6 0 0 0 0 2 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................CTGTTTATCGCCGTCACGTCTTAGCAGTC.................................................................. 29 1 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................GTTGCCAAAGAATGTCGTGCTGTATT........................... 26 2 20 0.25 5 0 4 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................TAACGCCGTCACGTCTTAGCAGT................................................................... 23 0 20 0.25 5 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................ATGCCAAAGAATGTCGTGCTGTATT........................... 25 1 20 0.20 4 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................GTGCCAAAGAATGTCGTGCTGTATTA.......................... 26 0 20 0.20 4 0 0 0 2 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................CCGTCACGTCTTAGCAGTCG................................................................. 20 0 20 0.20 4 0 1 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................GGACGTGTAAATCGTACGTAGTATAAG................................................................................................................ 27 0 20 0.15 3 1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................GGACGTGTAAATCGTACGTAGTCTA.................................................................................................................. 25 1 20 0.15 3 0 1 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................GGACGTGTAAATCGTACGTAGTACA.................................................................................................................. 25 1 20 0.15 3 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................GTGCCAAAGAATGTCGTGC................................. 19 0 20 0.15 3 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................GTGCCAAAGAATGTCGTGCTGTAT............................ 24 0 20 0.15 3 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................ACGTGCCAAAGAATGTCGTGCTGTAT............................ 26 0 20 0.15 3 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TGCCAAAGAATGTCGTGCTGTATTAAT........................ 27 0 20 0.15 3 0 0 1 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TGCCAAAGAATGTCGTTCTGTATT........................... 24 1 20 0.15 3 0 1 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................GCCGTCACGTCTTAGCAGTCG................................................................. 21 0 20 0.15 3 0 0 0 0 0 0 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................GTCACGTCTTAGCAGTCGGACGAACTT........................................................ 27 0 20 0.15 3 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................AAGAATGTCGTGCTGTATT........................... 19 0 20 0.15 3 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................GCTAGAACAGCGTTAGTGCGGGTCACT............................................................................................................................................. 27 0 20 0.15 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................CGAACTTGCACGTGCCAAAGAATGTCGT................................... 28 0 20 0.15 3 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TGCCAAAGGATGTCGTGCTGTATT........................... 24 1 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TGCCAAATAATGTCGTGCTGTATT........................... 24 1 20 0.10 2 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................AACGCCGTCAGGTCTTAGCAGTCG................................................................. 24 1 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................ACTTGCACGTGCCAAAGAATGTCGT................................... 25 0 20 0.10 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................CGAACTTGCACGTGCCAAAGAATGT...................................... 25 0 20 0.10 2 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................AAGAATGTCGTGCTGTATTAATAAT..................... 25 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TGCCCAAGAATGTCGTGCTGTATT........................... 24 1 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................AACTTGCACGTGCCAAAGAATGTCGT................................... 26 0 20 0.10 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................GCCAAAGAATGTCTTGCTGTATT........................... 23 1 20 0.10 2 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................ACGTGCCAAAGAATGTCGTGCTGTA............................. 25 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................GACGTGTAAATCGTACGTAGTATC.................................................................................................................. 24 1 20 0.10 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TTAACGCCGTCACGTCTTAGC...................................................................... 21 0 20 0.10 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............GTCGCTAGAACAGCGTTAGTGCGGGT................................................................................................................................................. 26 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................TGGACGTGTAAATCGTACGTGGTATA.................................................................................................................. 26 1 20 0.10 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................AGCCAAAGAATGTCGTGCTGTATT........................... 24 1 20 0.10 2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................TAGCAGTCGGACGAACTTGCACGTGC................................................ 26 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................AACGCCGTCACGTCTTAGCAGT................................................................... 22 0 20 0.10 2 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TGCCAACGAATGTCGTGCTGTATT........................... 24 1 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TGCTAAAGAATGTCGTGCTGTATT........................... 24 1 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................CTTGCCAAAGAATGTCGTGCTGTATT........................... 26 1 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................AGAATGTCGTGCTGTATT........................... 18 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................TTGCACGTGCCAAAGAATGTCGT................................... 23 0 20 0.10 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................GGTCACTCTGGACGTGTAAAT............................................................................................................................... 21 0 20 0.10 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................GACGAGTAAATCGTACGTAGTATA.................................................................................................................. 24 1 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................CTAGAACAGCGTTAGTGCGG................................................................................................................................................... 20 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................CTGGACGTGTAAATCGTACGTGGTATA.................................................................................................................. 27 1 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................GCGGGTCACTCTGGACGTGTAAATCGT............................................................................................................................ 27 0 20 0.10 2 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....ACCGTTATCGTCGCTAGAACAGC............................................................................................................................................................. 23 0 20 0.10 2 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TGCCAAAGAATGTCGTGCTGT.............................. 21 0 20 0.10 2 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................TAACGCCGTCACGTCTTAGCAGTCG................................................................. 25 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................CGTTAGTGCGGGTCACTCTGGACGTGT................................................................................................................................... 27 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...................................................GTAAATCGTACGTAGTATA.................................................................................................................. 19 0 20 0.10 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................GCACGTGCCAAAGAATGTCGT................................... 21 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TGCCAAACAATGTCGTGCTGTATT........................... 24 1 20 0.10 2 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................TCCGTGTAAATCGTACGTAGTATA.................................................................................................................. 24 2 20 0.10 2 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................GTCACGTCTTAGCAGTCG................................................................. 18 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................CCGTGCCAAAGAATGTCGTGCTGTATTA.......................... 28 1 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................CGTGCCAAAGAATGTCATGCTGTATT........................... 26 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................GGACGTGTAAATCGAACGTAGTATA.................................................................................................................. 25 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................CGTGCCAAGGAATGTCGTGCTGTATT........................... 26 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................CTTGGCAGTCGGACGAACTTGCAC.................................................... 24 1 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................CTGGACGTGTAAATCGTACGTAGTATC.................................................................................................................. 27 1 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......CGTTATCGTCGCTAGAACAGCG............................................................................................................................................................ 22 0 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................CGTGCCAAAGTATGTCGCGCTGTATT........................... 26 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................AAGCCAAAGAATGTCGTGCTGTATT........................... 25 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................TAACGCCGTCACGTCTTAGCAGTCGGA............................................................... 27 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................TAACGCCGTCACGTCTTAGCAG.................................................................... 22 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................GTGCCAAAGGATGTCGTGCTGTATT........................... 25 1 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TTAGCAGTCGGACGAACTTGCACGTGCCA.............................................. 29 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................CAAAGAATGTCGTGCAGTATT........................... 21 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................CCAAAGAATGTCGTGCCGTATT........................... 22 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................CGAACTTGCACGTGCCAAAGAATGTCTT................................... 28 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................CGCCGTCACGTCTCAGCAGTCG................................................................. 22 1 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............GTCGCTAGAACAGCGTTAGTGCGG................................................................................................................................................... 24 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................CGTGTAAATCGTACGTAGTA.................................................................................................................... 20 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TGCCATAGAATGTCGTGCTGTATT........................... 24 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................TCGGACGAACTTGCACGTGCCAAAGAAT........................................ 28 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................GTTTAACGCCGTCACGTCTTAGCAGT................................................................... 26 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................CGTGTAAATCGCACGTAGTATA.................................................................................................................. 22 1 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TGCCAAAGAATGTCGTCCTGTATT........................... 24 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....ACCGTTATCGTCGCTAGAACAGCGT........................................................................................................................................................... 25 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................AGAATGTCGTGCTGTATTAATAATTT................... 26 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................CAAAGAATGTCGTGCTGTATTAAT........................ 24 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................GAACAGCGTTAGTGCGGGTCACTC............................................................................................................................................ 24 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................TAACGCCGTCACGTCTTAGCAGTC.................................................................. 24 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................AAGAATGTCGTGCTGTATTAA......................... 21 0 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................CTTAGCAGTCGGACGAACTTGCACGT.................................................. 26 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................GGACGTGTAAATCGTACGTAGTATC.................................................................................................................. 25 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................CGAACTTGCACGTGCCAAA............................................ 19 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................CGTGCCAAAGAATGTCGTCCTGTATT........................... 26 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................CGTGTACATCGTACGTAGTATA.................................................................................................................. 22 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................CGGACGAACTTGCACGTGCCAAAGAAT........................................ 27 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................CGTCACGTCTTAGCAGTCG................................................................. 19 0 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................TTTAACGCCGTGACGTCTTAGCAGTCG................................................................. 27 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....CCGTTATCGTCGCTAGAACAG.............................................................................................................................................................. 21 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................GGACGAACTTGCACGTGCCAAAGAATGTC..................................... 29 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................GTGCCAAAGAATGTCGTGCTGTATTAAT........................ 28 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................ACGAACTTGCACGTGCCAAAGAATGTC..................................... 27 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................CGTGCCAAAGGATGTCGTGCTGTA............................. 24 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................CGTGTAAATCGTACGTAGTATC.................................................................................................................. 22 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................ACGTGCCAAAGAATGTCGTGCT................................ 22 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
...................................................................................................................................CGTGCCAAAGAATGTCGTGCTCTATT........................... 26 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................CCGTGCCAAAGAATGTCGTGCTGTATT........................... 27 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................CGTGCCAACGAATGTCGTGCTGTATT........................... 26 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................GGGTCACTCTGGACGTGTAA................................................................................................................................. 20 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
................................................................................................ACGCCGTCACGTCTTAGCAGTC.................................................................. 22 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................TTTAACGCCGTCACGTCTTAGCAG.................................................................... 24 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................CGTGCCAAAGAATGTCGGGCTGTATT........................... 26 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TGTTTCACGCCGTCACGTCTTAGCAGTC.................................................................. 28 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................CCGTCACGTCTTAGCAGT................................................................... 18 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
................................................................................................ACGCCGTCACGTCTTAGCAGT................................................................... 21 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................AAAGAATGTCGTGCTGTATTAATAAT..................... 26 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TGCCAAAGAATGTCATGCTGTATT........................... 24 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................ACTCTGGACGTGTAAATCGTACGTAGT..................................................................................................................... 27 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................ACTCTGGACGTGTAAATCGTACGTA....................................................................................................................... 25 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................CTAGAACAGCGTTAGTGCGGGT................................................................................................................................................. 22 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................AGAACAGCGTTAGTGCGGGTCACT............................................................................................................................................. 24 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............CGCTAGAACAGCGTTAGTGCGGGTC................................................................................................................................................ 25 0 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................CGTCACGTCTTAGCAGTC.................................................................. 18 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................GTTTAACGCCGTCACGTCTTAGC...................................................................... 23 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................GCGGGTCACTCTGGACGTGT................................................................................................................................... 20 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
....................................................................................................................................GTGCCAACGAATGTCGTGCTGTATT........................... 25 1 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................CGAACTTGCACGTGCCAAAGA.......................................... 21 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................CTGGACGTGTAAATCGTACGTAGTAT................................................................................................................... 26 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................TAGAACAGCGTTAGTGCGGGT................................................................................................................................................. 21 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................GCCCAAGAATGTCGTGCTGTATT........................... 23 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TGTTTAACGCCGTCACATCTTAGCAGTC.................................................................. 28 1 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................GGCCGTGTAAATCGTACGTAGTATA.................................................................................................................. 25 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................CGTGCCAAAGAATGTCGTG.................................. 19 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................TGGACGTGTAAATCGTACGTAGTA.................................................................................................................... 24 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................GGGTAAATCGTACGTAGTATA.................................................................................................................. 21 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................CCAAAGACTGTCGTGCTGTATTAA......................... 24 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................ATGTACGTGTAAATCGTACGTAGTATA.................................................................................................................. 27 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................GTGCCAAACAATGTCGTGCTGTATT........................... 25 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TGCCAAAGAATGTCGTGCTGTATTGCT........................ 27 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................CCAAAGAATGTCGTGCTGTATTAA......................... 24 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TCAACGCCGTCAGGTCTTAGCAGTCG................................................................. 26 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TGCCAAAGAATGTCCTGCTGTATT........................... 24 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................GACGTGTAAATCGAACGTAGTATA.................................................................................................................. 24 1 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................TCACGCCGTCACGTCTTAGCAGTC.................................................................. 24 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................TCCGCCGTCACGTCTTAGCAGTCG................................................................. 24 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................TACGCCGTCACGTCTTAGCAGTCG................................................................. 24 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................CGTGCCCAAGAATGTCGTGCTGTATT........................... 26 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................CGTGTAAATCGTACGTAGTATAC................................................................................................................. 23 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TGTAACTCGTACGTAGTATA.................................................................................................................. 20 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................ACGCCGTCACGTCTTAGCAGCC.................................................................. 22 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................CGCCGTCACGTCTTAACAGTCG................................................................. 22 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................CAAAGAATGTAGTGCTGTATT........................... 21 1 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................ACGTGTAAATCGTACGTAGTA.................................................................................................................... 21 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TGCCAAAGAATGTCGTGCTATATT........................... 24 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...AACCGTTATCGTCGCTAGAACAGCGTT.......................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....CCGTTATCGTCGCTAGAACA............................................................................................................................................................... 20 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...........................................................................................GTTTAACGCCGTCACGTCTTAGCAGTCG................................................................. 28 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................GTGCCAAAGAATGTCGTGCCGTATT........................... 25 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................TAGCAGTCGGACGAACTTGC...................................................... 20 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................GCTAGAACAGCGTTAGTGCGG................................................................................................................................................... 21 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TTAACGCCGTCACGTCTTAGCAGT................................................................... 24 0 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................GCACGTGCCAAAGAATGTCGTG.................................. 22 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................TTTAACGCCGTCAGGTCTTAGCAGTCG................................................................. 27 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............GTCGCTAGAACAGCGTTAGTGCGGG.................................................................................................................................................. 25 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................TTAACGCCGTCACGTCTTAGCAGTCC................................................................. 26 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................GGGTCACTCTGGACGTGTAAAT............................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................AACGCCGTCACGTGTTAGCAGTC.................................................................. 23 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TTAACGCCGTCACGTATTAGCAGTCG................................................................. 26 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................GCCAAAGAATGTCGTGCTGTATTC.......................... 24 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................TCACGTCTTAGCAGTCGGACGAACTT........................................................ 26 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CTTGCACGTGCCAAAGAATGTCGT................................... 24 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................CGTGCCAAAGAATGTCGTACTGTATT........................... 26 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................CACTCTGGCCGTGTAAATCGTACGTA....................................................................................................................... 26 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................CGTCACGTCTTAGCAGTCGGACGAACTT........................................................ 28 0 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TGTTAATCGTACGTAGTATA.................................................................................................................. 20 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
AAGAACCGTTATCGTCGCTAGAACAGCGT........................................................................................................................................................... 29 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............CGCTAGAACAGCGTTAGTGCGGGTCA............................................................................................................................................... 26 0 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................ACGCCGTCACGTCTTGGCAGTC.................................................................. 22 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................AGAACAGCGTTAGTGCGGGTCACTC............................................................................................................................................ 25 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................TGCACGTGCCAAAGAATGTCGTGCTGTA............................. 28 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................GAGTAAATCGTACGTAGTATA.................................................................................................................. 21 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................CTAGAACAGCGTTAGTGCGGGTCACT............................................................................................................................................. 26 0 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TTAACGCCGTCACGTCTTAGCAG.................................................................... 23 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................TACGTGTAAATCGTACGTAGTATA.................................................................................................................. 24 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................CGTGCCAAAGAATTTCGTGCTGTATT........................... 26 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..............................................GACGTGTAACTCGTACGTAGTATA.................................................................................................................. 24 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................AACGCCGTCACGTCTTAGCAGTC.................................................................. 23 0 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TGCCAAAGAATGTCGTGCTG............................... 20 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................CCAAAGAATGTCGTGCTGT.............................. 19 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................AGCAGTCGGACGAACTTGCACGTGCCAA............................................. 28 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................GCCAAAGAATGTCATGCTGTATT........................... 23 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................AGCAGTCGGACGAACTTGCACG................................................... 22 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TGCCAAAGAATGTCTTGCTGTATT........................... 24 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................GTAAATCGTACGTAGAATA.................................................................................................................. 19 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TCCCAAAGAATGTCGTGCTGTATT........................... 24 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12728:176850-177033 - dvi_421 TTCTTGGCAATAGCA------GCGATCTTGTC------GCAATCACGCCCAGTGAGACCTGCACATTTAGCATGCATCATATTCTTACACAGCCAGCAATTGACA-------AATTGCG----GCAGTGCA------------------GAATCGTCAGCCTGCTTGAACGTG---------CACGGTTTCTTACAGCA-CGACATA----------ATT----AT-----------------TAAATG--CG-----TAAGCAAGTTGCGAG
droMoj3 scaffold_4152:3588-3774 + GCTTTAGTAATAGAC------ATAATCTTGTC------ATATTCACGCCCAGTAAGACCTGCACACTTAGTATGCATCATGTTATCACACAGCCAGCAACTTATA-------AATTGCG----CTTGTGCA------------------GAATCAACTGTTTGCCTGAAAGTG---------CAAGCTTTTTTGCAGCA-ACACATA----------TTGGCAA----------------------TTG--GGATAGATCACAAAGTT-ACTG
droGri2 scaffold_15110:24456926-24457050 - CAT----------------------------------------------------------------------GAATTATGTT----CGCAGCAAACGATTCACA-------AATTGTG----GCTGTGCT------------------GAGTGATTAGCAAGCTTAAATGTG---------CATCTTTTTGT--AGCA-TAGCATAAGT--A----TTTACAA----------------------ATG--AGGT---CAAGCAAATTCAAAA
droWil2 scf2_1100000004968:3373591-3373771 + GGCTTAGACACAGACAAACCAGAAAACTTGTC------GTAGTCGCGGCCATTGAGGCCAGCACATTTTAAGTGAATAAGATTATCGCAAAGCCAACAAGATA-----------TTGCT----CTA-----------TACTGATCATCAAAACGATCAGAATGCTTGCAAGTAGGTAGACAACAAGCCATTATAAAG---------------------------------------------------------C---CAAAAGAAACACAAG
dp5 2:24561920-24562065 + CTTT--GAAA---------------TGTCATC------ACCCACAAGGCCAGAAAATCCAGCGCATTTTGCGTGCACTACGCTGTCGCAGAGCCAGCAGGGGATAATCGGCTGA-----------------------------TCGT--GGCTGATCT----GCTT---ATTG---------CATGATTTTTTGGCG---CAGAAAAA-----AATA-------AA-----------------T-------------------------AAAT
droPer2 scaffold_1249:3963-4147 - TTT--GGCTATAG---------------CATC------GCTCACGAGGCCAGAAAATCCCGCGCATTTTGCGTGGACTACGCTGTCGCAGAGCCAGCAGGGGACATTTGGCTGA-----------------------------TCGT--GAGTGATCT----GCTT---CTTG---------CAGGTTTTTTTGGCG---CAGACGAC-----AGCG-------AATTCCATTTTTATTTTATTATTCAATATTT---CTAGAGAGTTGCGAG
droKik1 scf7180000297977:2944-3039 - ------------------------------------------------------AGATCGGCACATCCAACGTGAGCGATATTATCGCAGAGCCAGCAGTAAA-----------CTGTGACCTGCAGCGAAGAAATTTGTTG-------------------------------------------GCCGTTTGGGCA---CG--------------------------------------------------------T----------AGGG
droFic1 scf7180000449468:9516-9569 - ---------------------------------------------CGGCCATTAAAACCAGCGCACTTAGTGTGCACTATTTTATCACACAGCCAACAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000774482:3977-4117 + ------------------------------------------------CCAGTAAAACCGGCGCACTTGGTTTGCACCATATTTTCACACAGCCAGCAAGTCATATTAGACTGG-----------------------------TCAG--CCCTGATTA----CGAG---GCTG---------CATTTTTTGCA---GAAGCAGACTAAAT--T----TTT----AT-----------------TATTCA--T--T---TTATTTAATTACCAC
droTak1 scf7180000415886:1970-2143 + TTTT-GGAAATAA---------------GATCCCCAATACGACCATGTACGCCGACACCAGCGCACTTGCAATGCGCAGTATTCTCGCATAGCCAGCACAACAAATAAG-----TTTCG------------------------CCAG--CAATAACGC----CGTTGAACTCG---------CATTTTTTGGC---TGAGCAGGATAGACTCA----TTTTTGA----------------------ATG--CACT---C----AGGTC-ACTA
dm3 chr2R:412747-412789 + --------------------------------------------------------ACTAGCGCACTTAGTATGCATCATTCTATCACATAGCCAACAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_116:14039-14093 + --------------------------------------------ACGGCCATTAAAACCAGCGCACTTAGTATGCACCATTCTATCACACAGCCAACAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TTCTTGGCAATAGCA------GCGATCTTGTC------GCAATCACGCCCAGTGAGACCTGCACATTTAGCATGCATCATATTCTTACACAGCCAGCAATTGACA-------AATTGCG----GCAGTGCA------------------GAATCGTCAGCCTGCTTGAACGTG---------CACGGTTTCTTACAGCA-CGACATA----------ATT----AT-----------------TAAATG--CG-----TAAGCAAGTTGCGAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................................................................................................................................................AATCGTCAGCCTGCTTGAACGTG---------C..........................................................................................242042.108420000000000005900000000000000029000000007540000000000000000000000000
.......CAATAGCA------GCGATCTTGTC------GCAATCACG..................................................................................................................................................................................................................................28209.6019200000000000000000000000200000700183000000000000000000000000000000
.................................................................................................................................CA------------------GAATCGTCAGCCTGCTTGAACGTG---------C..........................................................................................27207.2014400000000000000000000000000000000000000000970000047000000000000000
........................................................................TGCATCATATTCTTACACAGCCAGCAAT.............................................................................................................................................................................2837.0021002000000000000000000000014100006004300000000000000000000000000
.......CAATAGCA------GCGATCTTGTC------GCAATCA....................................................................................................................................................................................................................................26205.2510500000000000000000000000000000000000000105000000000000000000000000
......................................................................................................................................................AATCGTCAGCCTGCTTGAACGTG---------CACG.......................................................................................27203.50700000000000000000000000000000000000007630000000000000000000000000
.....................................................................................................................................................................................................CA-CGACATA----------ATT----AT-----------------TAAATG--CG-----TAAGC..........27153.0746001000100000000000000000246520228026221000000000000000000000000
........................................................................TGCATCATATTCTTACACAGCCAGCA...............................................................................................................................................................................2643.0012004000000000000000000000102310000010000000000000000000000000000
......................................................................................................................................................AATCGTCAGCCTGCTTGAACGTG---------CACGG......................................................................................28202.45490000300000000000000000000000200000000440000000000000000000000000
........................................................................TGCATCATATTCTTACACAGCCAGC................................................................................................................................................................................2542.259006000000000000000000000110000000001000000000000000000000000000
........................................................................TGCATCATATTCTTACACAGCCAGCAA..............................................................................................................................................................................2742.259002000000000000000000000103100000011000000000000000000000000000
......................................................................................................................................................AATCGTCAGCCTGCTTGAACGTG---------CA.........................................................................................25202.05410000000000000000000000000300000030000100000000000000000000000007
......................................................................................................................................................AATCGTCAGCCTGCTTGAACGTG---------...........................................................................................23201.85370000000000000000000000003700000000000000000000000000000000000000
.......CAATAGCA------GCGATCTTGTC------GCA........................................................................................................................................................................................................................................22201.65330000005000000000000000028000000000000000000000000000000000000000
.....................................................................................................................................................GAATCGTCAGCCTGCTTGAACGTG---------C..........................................................................................25201.65330000330000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................TCTTACAGCA-CGACATA----------ATT----AT-----------------TAAAT.........................27201.352700000000000000000000000000000000160000110000000000000000000000000
.......................GATCTTGTC------GCAATCACGCCCAGTGA..........................................................................................................................................................................................................................26201.05210000000000000000000000000120000007001010000000000000000000000000
........................................................................TGCATCATATTCTTACACAGCCA..................................................................................................................................................................................2341.004000000000000000000000000110100000010000000000000000000000000000
......................................................................................................................................................AATCGTCAGCCTGCTTGAACGT.....................................................................................................22200.85170000600000001000000001000000000000000000000000000000000000000000
........................................................................TGCATCATATTCTTACACAGCCAG.................................................................................................................................................................................2440.753002000000000000000000000000000010000000000000000000000000000000
.......CAATAGCA------GCGATCTTGTC------GCAATCACGC.................................................................................................................................................................................................................................29200.6513000040000000000000000000000000000090000000000000000000000000000
.......CAATAGCA------GCGATCTTGTC------...........................................................................................................................................................................................................................................19200.55110000100000000000000000000000100000000000000000000000000000000000
TTCTTGGCAATAGCA------GCGATCTTG...................................................................................................................................................................................................................................................24200.50100000001000000000000000000000000000000000000000000000000000000000
.......CAATAGCA------GCGATCTTGTC------GCAA.......................................................................................................................................................................................................................................23200.459000000002000000000000000000070000000000000000000000000000000000
.....................................................................................................................................................................................................CA-CGACATA----------ATT----AT-----------------TAAATG--CG-----TAAGCA.........28150.406000000000000000000000000000100001003010000000000000000000000000
.....................................................................................................................................................................................................CA-CGACATA----------ATT----AT-----------------TAAATG--CG-----TAA............25160.386000000000000000000000000000300001001100000000000000000000000000
........................................................................................................................................................TCGTCAGCCTGCTTGAACGTG---------CACGG......................................................................................26200.357000000000000000000000000000000000016000000000000000000000000000
................................................................................ATTCTTACACAGCCAGCAAT.............................................................................................................................................................................2030.331000000000000000000000000000000000001000000000000000000000000000
.....................................................................................................................................................................................................CA-CGACATA----------ATT----AT-----------------TAAATG--CG-----TAAG...........26160.315000000000000000000000000000000003001001000000000000000000000000
.......CAATAGCA------GCGATCTTGTC------GCAATC.....................................................................................................................................................................................................................................25200.306000600000000000000000000000000000000000000000000000000000000000
.........................TCTTGTC------GCAATCACGCCCAGTGAGACC......................................................................................................................................................................................................................28200.306000000000000000000000000003000000030000000000000000000000000000
.........................................................................GCATCATATTCTTACACAGCCAGC................................................................................................................................................................................2440.251001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................TAAATG--CG-----TAAGCAAGTTGCG..2190.222000000000100000000000000000000010000000000000000000000000000000
........................................................................................................................................................TCGTCAGCCTGCTTGAACGTG---------C..........................................................................................22200.204000001000000000000000000000030000000000000000000000000000000000
........AATAGCA------GCGATCTTGTC------GCAATCACG..................................................................................................................................................................................................................................27200.204000000000000000000000000000400000000000000000000000000000000000
.......CAATAGCA------GCGATCTTGTC------G..........................................................................................................................................................................................................................................20200.204000000000000000000000000000000000040000000000000000000000000000
.......CAATAGCA------GCGATCTTGTC------GC.........................................................................................................................................................................................................................................21200.153000000000000000000000000000000003000000000000000000000000000000
..........TAGCA------GCGATCTTGTC------GCAATCACGCCC...............................................................................................................................................................................................................................28200.153003000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................ATCGTCAGCCTGCTTGAACGTG---------CACG.......................................................................................26200.153002000000000000000000000001000000000000000000000000000000000000
.........................TCTTGTC------GCAATCACGCCCAGTGAG.........................................................................................................................................................................................................................25200.153000000100000000000000000000000002000000000000000000000000000000
...............................................................................................................................TGCA------------------GAATCGTCAGCCTGCTTGAACGT.....................................................................................................27200.153000000000000000000000000003000000000000000000000000000000000000
TTCTTGGCAATAGCA------GCGATCTTGT..................................................................................................................................................................................................................................................25200.153000000000000000000000000000000000000300000000000000000000000000
.......CAATAGCA------GCGATCTTGTC------GCAATCAT...................................................................................................................................................................................................................................27200.153000010000000000000000000000200000000000000000000000000000000000
........................................................................................................................................................TCGTCAGCCTGCTTGAACGTG---------CACG.......................................................................................25200.153000000000000000000000000000200000000100000000000000000000000000
.................................................................................................................................CA------------------GAATCGTCAGCCTGCTTGAACGTG---------CACGGTT....................................................................................33200.102000000000000000000000000000000000000000020000000000000000000000
.........ATAGCA------GCGATCTTGTC------GCAATCACGCCCAG.............................................................................................................................................................................................................................31200.102000000000000000000000000000000000000000000000000000000000000002
.............................................................................................................................................................................................................TA----------ATT----AT-----------------TAAATG--CG-----TAAGCAAGTTGC...27100.101000000000000000000000001000000000000000000000000000000000000000
.................................................................................................................................CA------------------GAATCGTCAGCCTGCTTGAACG......................................................................................................24200.102000000000000000000000000010000000000000000000000000000000010000
........................ATCTTGTC------GCAATCACGCCCAGTGA..........................................................................................................................................................................................................................25200.102000000000000000000000000000000011000000000000000000000000000000
............................................................................................................................................................................................TTCTTACAGCA-CGACATA----------........................................................18200.102000000000000000000000000000000000000000000000000000000000000002
......................................................................................................................................................AATCGTCAGCCTGCTTGAACGTT---------...........................................................................................23200.102000000000000000000000001000010000000000000000000000000000000000
......................................................................................................................................................AATCGTCAGCCTGCTTGAACG......................................................................................................21200.102000000000000000000000000000000000000200000000000000000000000000
......................................................................................................................................................AATCGTCAGCCTGCTTGAAC.......................................................................................................20200.102000000000000000000000000000000000000000000000000000000000000002
.TCTTGGCAATAGCA------GCGATCTTG...................................................................................................................................................................................................................................................23200.102000000000000010000000000000000000000000100000000000000000000000
..................................................................................................................TTGCG----GCAGTGCA------------------GAATCGTCAGCCTGC.............................................................................................................28200.102000000000000000000000000000000000000000000000002000000000000000
.....................................................................................................................................................................................................CA-CGACATA----------ATT----AT-----------------TAAATG--CG-----TAAGCAA........29140.071000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................................GCA-CGACATA----------ATT----AT-----------------TAAATG--CG-----TAA............26160.061000000000000000000000000000000000000010000000000000000000000000
..............................................................................................................................................................GCCTGCTTGAACGTG---------CACG.......................................................................................19200.051000000000000010000000000000000000000000000000000000000000000000
.......................GATCTTGTC------GCAATCACGCCCAGTG...........................................................................................................................................................................................................................25200.051000000000000000000000000000010000000000000000000000000000000000
.TCTTGGCAATAGCA------GCGATCTTGTC------GCA........................................................................................................................................................................................................................................28200.051000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................TTCTTACAGCA-CGACATA----------ATT----AT-----------------TAAA..........................27200.051000000000000000000000000000000010000000000000000000000000000000
.....................................................................................................................................................................................................CA-CGACATA----------ATT----AT-----------------TAAAT.........................19200.051000000000000000000000000000010000000000000000000000000000000000
..........TAGCA------GCGATCTTGTC------GCAATCACG..................................................................................................................................................................................................................................25200.051000000000000000000000000000000001000000000000000000000000000000
........................................................................................................................................................TCGTCAGCCTGCTTGAACGTG---------CAC........................................................................................24200.051000000000000000000000000000000000000100000000000000000000000000
.......CAATAGCA------GCGATCTTGTC------GCAATCC....................................................................................................................................................................................................................................26200.051000000000000000000000000001000000000000000000000000000000000000
.........ATAGCA------GCGATCTTGTC------GCAA.......................................................................................................................................................................................................................................21200.051000000000000000000000000000000000000010000000000000000000000000
.....................................................................................................................................................GAATCGTCAGCCTGCTTGAA........................................................................................................20200.051000000000000000000000000000100000000000000000000000000000000000
.................................................................................................................................CA------------------GAATCGTCAGCCTGCTTGAACGTG---------CACGGT.....................................................................................32200.051000000000000000000000000000000000000000000100000000000000000000
.........................TCTTGTC------GCAATCACGCCCAGTGA..........................................................................................................................................................................................................................24200.051000000000000000000000000000000000000010000000000000000000000000
..............................................................................................................................................................................................CTTACAGCA-CGACATA----------ATT----AT-----------------TAAAT.........................26200.051000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................................TGCA------------------GAATCGTCAGCCTGCTTGAACGTG---------C..........................................................................................29200.051001000000000000000000000000000000000000000000000000000000000000
TTCTTGGCAATAGCA------GCGATCTTGTC------...........................................................................................................................................................................................................................................26200.051000000000000000000000000001000000000000000000000000000000000000
........AATAGCA------GCGATCTTGTC------GCAATCAC...................................................................................................................................................................................................................................26200.051000000000000000000000000100000000000000000000000000000000000000
................................................................................................................................................................................................TACAGCA-CGACATA----------ATT----AT-----------------TAAATG--CG-----...............27200.051000000000000000000000000000000000001000000000000000000000000000
.........................TCTTGTC------GCAATCACGCCCAGTGAGA........................................................................................................................................................................................................................26200.051000000000000000000000000100000000000000000000000000000000000000
...TTGGCAATAGCA------GCGATCTTGTC------GC.........................................................................................................................................................................................................................................25200.051000000000000000000000000001000000000000000000000000000000000000
...............................................................................................................................................................................................TTACAGCA-CGACATA----------ATT----A................................................19200.051000000000000000000000000000000000001000000000000000000000000000
...............................................................................................................................TGCA------------------GAATCGTCAGCCTGCTTGAACGTG---------...........................................................................................28200.051000010000000000000000000000000000000000000000000000000000000000
........................ATCTTGTC------GCAATCACGCC................................................................................................................................................................................................................................19200.051000000000000000000000000000000000000010000000000000000000000000
..........................................................................................................................................................GTCAGCCTGCTTGAACGT.....................................................................................................18200.051000000000000000000000000000000000000001000000000000000000000000
..............................TC------GCAATCACGCCCAGTGAGA........................................................................................................................................................................................................................21200.051000000000000000000000000001000000000000000000000000000000000000
......................................................................................................................................................AATCGTCAGCCTGCTTGAACGTG---------CT.........................................................................................25200.051000000000000000000000000000000000001000000000000000000000000000
...........AGCA------GCGATCTTGTC------GCAATCACGCCCAG.............................................................................................................................................................................................................................29200.051000000000000000000000000000000000000000000000000000000000000001
.............CA------GCGATCTTGTC------GCAATCACG..................................................................................................................................................................................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
........AATAGCA------GCGATCTTGTC------GCAATCA....................................................................................................................................................................................................................................25200.051000000000000000000000000000000000000001000000000000000000000000
....................................................................................................................................................................TTGAACGTG---------CACGGTTTCTTACAGCA-.........................................................................26200.051000000000000000000000000000000001000000000000000000000000000000
.......................GATCTTGTC------GCAATCACGCCCAGTGAG.........................................................................................................................................................................................................................27200.051000000000000000000000000000000000000000000000000000000000000001
........................ATCTTGTC------GCAATCACGCCCAGTGAGAC.......................................................................................................................................................................................................................28200.051000000000000100000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................CTTACAGCA-CGACATA----------ATT----AT-----------------TAAA..........................25200.051000000000000000000000000001000000000000000000000000000000000000
.TCTTGGCAATAGCA------GCGATCT.....................................................................................................................................................................................................................................................21200.051000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................TGCTTGAACGTG---------CACGGTTTCTTACAGC...........................................................................28200.051000000000000000000000000000010000000000000000000000000000000000
.................................................................................................................................................................TGCTTGAACGTG---------CACGGTTTCTTA...............................................................................24200.051000000000000000000000000000000010000000000000000000000000000000
...............................................................................................................................................................................................TTACAGCA-CGACATA----------ATT----AT-----------------TA............................22200.051000000000000000000000000000000000001000000000000000000000000000
..............................TC------GCAATCACGCCCAGTGAGACCTGC...................................................................................................................................................................................................................26200.051000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................TGCA------------------GAATCGTCAGCCTGCTTGAACG......................................................................................................26200.051000010000000000000000000000000000000000000000000000000000000000
.......CAATAGCA------GCGATCTTGTC------GCAT.......................................................................................................................................................................................................................................23200.051000000000000000000000000000000000000100000000000000000000000000
........................ATCTTGTC------GCAATCACGCCCAGT............................................................................................................................................................................................................................23200.051000000000000000000000000000000000001000000000000000000000000000
............................................................................................................................................................................G---------CACGGTTTCTTACAGCA-C........................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
.........ATAGCA------GCGATCTTGTC------GCAATCACGCCC...............................................................................................................................................................................................................................29200.051000000000000000000000000000000000000000000000000000000000000001
........................ATCTTGTC------GCAATCACGCCCAGTGAG.........................................................................................................................................................................................................................26200.051000000000000000000000000000000000000100000000000000000000000000
...TTGGCAATAGCA------GCGATCTTGTC------GCAAT......................................................................................................................................................................................................................................28200.051000000000000000000000000010000000000000000000000000000000000000
.....................................................................................................................................................GAATCGTCAGCCTGCTTGAACGTG---------CAC........................................................................................27200.051000000000000000000000000000000000000001000000000000000000000000
...........AGCA------GCGATCTTGTC------GCAAT......................................................................................................................................................................................................................................20200.051000010000000000000000000000000000000000000000000000000000000000
...........................TTGTC------GCAATCACGCCCAGTGAGACC......................................................................................................................................................................................................................26200.051000000000000000000000000000000000100000000000000000000000000000
...............................................................................................................................................................CCTGCTTGAACGTG---------CACGGTTTCTT................................................................................25200.051001000000000000000000000000000000000000000000000000000000000000
........AATAGCA------GCGATCTTGTC------...........................................................................................................................................................................................................................................18200.051000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................A------------------GAATCGTCAGCCTGCTTGAAAA......................................................................................................23200.051000000000000000000000000010000000000000000000000000000000000000
.........ATAGCA------GCGATCTTGTC------GCA........................................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
...........AGCA------GCGATCTTGTC------GCAATCACGCC................................................................................................................................................................................................................................26200.051001000000000000000000000000000000000000000000000000000000000000
.......CAATAGCA------GCGATCTTGTC------GCAATCAA...................................................................................................................................................................................................................................27200.051000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................CGTCAGCCTGCTTGAACGTG---------C..........................................................................................21200.051000000000000000000000000000000001000000000000000000000000000000
droMoj3
GCTTTAGTAATAGAC------ATAATCTTGTC------ATATTCACGCCCAGTAAGACCTGCACACTTAGTATGCATCATGTTATCACACAGCCAGCAACTTATA-------AATTGCG----CTTGTGCA------------------GAATCAACTGTTTGCCTGAAAGTG---------CAAGCTTTTTTGCAGCA-ACACATA----------TTGGCAA----------------------TTG--GGATAGATCACAAAGTT-ACTGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................................TTCACGCCCAGTAAGACCTGCACACT..............................................................................................................................................................................................................262047.8595705009520
.........................................TTCACGCCCAGTAAGACCTGCACAC...............................................................................................................................................................................................................252036.5573173100000
.........................................TTCACGCCCAGTAAGACCTGCACA................................................................................................................................................................................................................242012.2524524500000
.........................................TTCACGCCCAGTAAGACCTGCACACTT.............................................................................................................................................................................................................272010.5021021000000
.........................................TTCACGCCCAGTAAGACCTGCACACTTA............................................................................................................................................................................................................28206.4012812800000
..........................................TCACGCCCAGTAAGACCTGCACAC...............................................................................................................................................................................................................24202.55515100000
...............................................................................TGTTATCACACAGCCAGCAACTTATA-------.................................................................................................................................................................26202.204416100270
...............................................................................TGTTATCACACAGCCAGCAACTTA..........................................................................................................................................................................24201.853720000170
..........................................TCACGCCCAGTAAGACCTGCACACTTAG...........................................................................................................................................................................................................28201.30262600000
...............................................................................................................................TGCA------------------GAATCAACTGTTTGCCTGAAA.......................................................................................................25201.05212100000
...............................................................................TGTTATCACACAGCCAGCAACTTAT.........................................................................................................................................................................25201.00201910000
...............................................................................................................................TGCA------------------GAATCAACTGTTTGCCTGAAAGT.....................................................................................................27200.90180100170
.........................................TTCACGCCCAGTAAGACCTGC...................................................................................................................................................................................................................21200.55111010000
...............................................................................TGTTATCACACAGCCAGCAACTT...........................................................................................................................................................................23200.5010800020
.................................................CAGTAAGACCTGCACACTTAGTATGC......................................................................................................................................................................................................26200.357200050
...............................................................................................................................TGCA------------------GAATCAACTGTTTGCC............................................................................................................20200.306100050
.................................................................................TTATCACACAGCCAGCAACTTATA-------AAT..............................................................................................................................................................27200.255500000
.........................................TTCACGCCCAGTAAGACCTGCACAG...............................................................................................................................................................................................................25200.255000050
..............................................................................ATGTTATCACACAGCCAGCAACTTA..........................................................................................................................................................................25200.204000040
........................................................................TGCATCATGTTATCACACAGCCAGCAACT............................................................................................................................................................................29200.204300010
...........................................CACGCCCAGTAAGACCTGCACAC...............................................................................................................................................................................................................23200.204000040
................................................CCAGTAAGACCTGCACACTTAGTA.........................................................................................................................................................................................................24200.204400000
..................................................................TTAGTATGCATCATGTTATCACACAGCC...................................................................................................................................................................................28200.204400000
.................................................................................TTATCACACAGCCAGCAACTTATA-------.................................................................................................................................................................24200.204000040
...................................................................TAGTATGCATCATGTTATCACACAGCC...................................................................................................................................................................................27200.204400000
...................................................................TAGTATGCATCATGTTATCACACAGC....................................................................................................................................................................................26200.204000040
...........................................CACGCCCAGTAAGACCTGCACA................................................................................................................................................................................................................22200.204400000
............................................................................TCATGTTATCACACAGCCAGCAACT............................................................................................................................................................................25200.153300000
.....................................................................................CACACAGCCAGCAACTTATA-------AAT..............................................................................................................................................................23200.153300000
...............................................................................TGTTATCACACAGCCAGCAACT............................................................................................................................................................................22200.153300000
................................................................................GTTATCACACAGCCAGCAACTTAT.........................................................................................................................................................................24200.153300000
............................................ACGCCCAGTAAGACCTGCACACTTA............................................................................................................................................................................................................25200.102200000
..........................................TCACGCCCAGTAAGACCTGCACACTT.............................................................................................................................................................................................................26200.102000020
.................................................................................TTATCACACAGCCAGCAACTTATA-------AA...............................................................................................................................................................26200.102200000
................................................CCAGTAAGACCTGCACAC...............................................................................................................................................................................................................18200.102000020
..............................................................................................................................................................................................................A----------TTGGCAA----------------------TTG--GGATAGATCACA..........23200.102200000
..................................................................................TATCACACAGCCAGCAACTTA..........................................................................................................................................................................21200.102000020
............................................ACGCCCAGTAAGACCTGCACACTT.............................................................................................................................................................................................................24200.102100010
............................................................................TCATGTTATCACACAGCCAGCAACTT...........................................................................................................................................................................26200.102200000
..........................................TCACGCCCAGTAAGACCTGC...................................................................................................................................................................................................................20200.102200000
......................................................................................ACACAGCCAGCAACTTATA-------AATTGCG----C.....................................................................................................................................................27200.102200000
...............................................................................TGTTATCACACAGCCAGC................................................................................................................................................................................18200.102200000
.........................................TTCACGCCCAGTAAGACCTGCACACTA.............................................................................................................................................................................................................27200.102000020
.................................................................................................................................CA------------------GAATCAACTGTTTGCCTGAAAG......................................................................................................24200.102000020
............................TGTC------ATATTCACGCCCAGTAAGACC......................................................................................................................................................................................................................25200.102200000
.........................................TTCACGCCCAGTAAGACCTGCA..................................................................................................................................................................................................................22200.102000020
........................................................................TGCATCATGTTATCACACAGCC...................................................................................................................................................................................22200.102000020
........................................................................................................................................................TCAACTGTTTGCCTGAAAGTG---------CAAGC......................................................................................26200.102200000
...............................................................................................................................TGCA------------------GAATCAACTGTTTGCCTGAAAGC.....................................................................................................27200.102200000
...................................................................................ATCACACAGCCAGCAACTTATA-------A................................................................................................................................................................23200.051100000
.................................................CAGTAAGACCTGCACACT..............................................................................................................................................................................................................18200.051100000
............................................................................TCATGTTATCACACAGCCAGCAAC.............................................................................................................................................................................24200.051100000
......................................ATATTCACGCCCAGTAAGACCTGCA..................................................................................................................................................................................................................25200.051100000
.............................................CGCCCAGTAAGACCTGCACACC..............................................................................................................................................................................................................22200.051000010
.....................................................................GTATGCATCATGTTATCACACAGC....................................................................................................................................................................................24200.051100000
......................................................................TATGCATCATGTTATCACACAGCCAG.................................................................................................................................................................................26200.051100000
...........................................CACGCCCAGTAAGACCTGCACACT..............................................................................................................................................................................................................24200.051000010
.............................................................................CATGTTATCACACAGCCAGCAACTTA..........................................................................................................................................................................26200.051000010
.....................................................................................................TATA-------AATTGCG----CTTGTGCA------------------G...........................................................................................................................20200.051100000
......................................................................................................................G----CTTGTGCA------------------GAATCAACTGTTTGCC............................................................................................................25200.051100000
.....................................................................................CACACAGCCAGCAACTTATA-------AATTGCG----CC....................................................................................................................................................29200.051000010
.....................................................................................................................CG----CTTGTGCA------------------GAATCAACTGTTTGCC............................................................................................................26200.051000010
.................................................................................TTATCACACAGCCAGCAACTTATA-------AATTG............................................................................................................................................................29200.051100000
....................................................................................TCACACAGCCAGCAACTTATA-------.................................................................................................................................................................21200.051100000
.......................AATCTTGTC------ATATTCACGCCCA..............................................................................................................................................................................................................................22200.051100000
.......................................................................................CACAGCCAGCAACTTATA-------AAT..............................................................................................................................................................21200.051100000
.......................................................................................................................................................ATCAACTGTTTGCCTGAAAGT.....................................................................................................21200.051000010
..............................................GCCCAGTAAGACCTGCACACTTAG...........................................................................................................................................................................................................24200.051100000
.............................GTC------ATATTCACGCCCAGTAAGACC......................................................................................................................................................................................................................24200.051100000
.............................................................................CATGTTATCACACAGCCAGCAACC............................................................................................................................................................................24200.051000010
.................................................CAGTAAGACCTGCACACTTAGTATG.......................................................................................................................................................................................................25200.051100000
...............................................................................................................................TGCA------------------GAATCAACTGTTTGCCTGAAAG......................................................................................................26200.051000100
...............................................CCCAGTAAGACCTGCACACTTAGTA.........................................................................................................................................................................................................25200.051100000
...................................................................................ATCACACAGCCAGCAACTTATA-------AA...............................................................................................................................................................24200.051100000
....................................................................AGTATGCATCATGTTATCACACAGCC...................................................................................................................................................................................26200.051000010
................................................CCAGTAAGACCTGCACACTTA............................................................................................................................................................................................................21200.051100000
...............................................CCCAGTAAGACCTGCACACTTAGTATGC......................................................................................................................................................................................................28200.051100000
.............................................................................CATGTTATCACACAGCCAGCAACT............................................................................................................................................................................24200.051100000
.........................TCTTGTC------ATATTCACGCCCAGT............................................................................................................................................................................................................................22200.051000010
...................................................GTAAGACCTGCACACTTAGTATGCA.....................................................................................................................................................................................................25200.051100000
.........................TCTTGTC------ATATTCACGCCCAGTAAGACC......................................................................................................................................................................................................................28200.051100000
...........................................CACGCCCAGTAAGACCTGCACACTTA............................................................................................................................................................................................................26200.051100000
................................................CCAGTAAGACCTGCACACTTAT...........................................................................................................................................................................................................22200.051000010
...........................................................................................................................................................................................................CATA----------TTGGCAA----------------------TTG--GGATAGATCACA..........26200.051100000
.....................................................................................CACACAGCCAGCAACTTA..........................................................................................................................................................................18200.051000010
..................................................................................................................TTGCG----CTTGTGCA------------------GAATCAACTGTT................................................................................................................25200.051000010
.............................................................................CATGTTATCACACAGCCAGC................................................................................................................................................................................20200.051100000
...........................................................................................................................CTTGTGCA------------------GAATCAACTGTTTGCCT...........................................................................................................25200.051000010
.................................................................................................................................CA------------------GAATCAACTGTTTGCCTGAA........................................................................................................22200.051100000
.....................................................................................CACACAGCCAGCAACTTATA-------AATTGCG----C.....................................................................................................................................................28200.051010000
...............................C------ATATTCACGCCCAGTAAGACCTGCACAC...............................................................................................................................................................................................................29200.051000010
.......................................................................ATGCATCATGTTATCACACAGC....................................................................................................................................................................................22200.051000010
....................................................................................TCACACAGCCAGCAACTTATA-------AATTGC...........................................................................................................................................................27200.051100000
...........................................CACGCCCAGTAAGACCTGCACACTTAG...........................................................................................................................................................................................................27200.051000010
................................................................................................................................GCA------------------GAATCAACTGTTTGCCTG..........................................................................................................21200.051100000
.............................................................................CATGTTATCACACAGCCAGCAACTT...........................................................................................................................................................................25200.051100000
...................................................................................ATCACACAGCCAGCAACTTATA-------.................................................................................................................................................................22200.051000010
........................................................................TGCATCATGTTATCACACAGCCAGC................................................................................................................................................................................25200.051000010
..............................................GCCCAGTAAGACCTGCACACTTAGTAT........................................................................................................................................................................................................27200.051100000
...................................................GTAAGACCTGCACACTTAGTATGC......................................................................................................................................................................................................24200.051010000
......................................ATATTCACGCCCAGTAAGACC......................................................................................................................................................................................................................21200.051000010
...............................................CCCAGTAAGACCTGCACACTTAGT..........................................................................................................................................................................................................24200.051000010
..................................................................................................................TTGCG----CTTGTGCA------------------GAATCAACTGTTTGCC............................................................................................................29200.051000010
...........................................CACGCCCAGTAAGACCTGCAC.................................................................................................................................................................................................................21200.051100000
..................................................................................................................TTGCG----CTTGTGCA------------------GAATCAACTGTTTGC.............................................................................................................28200.051000010
............................................ACGCCCAGTAAGACCTGCAC.................................................................................................................................................................................................................20200.051000010
.....................................................................................................................................................GAATCAACTGTTTGCCTGAAAGTG---------C..........................................................................................25200.051100000
......................................................................TATGCATCATGTTATCACACAG.....................................................................................................................................................................................22200.051100000
................................................CCAGTAAGACCTGCACACTTAGTATGCA.....................................................................................................................................................................................................28200.051100000
.......................................TATTCACGCCCAGTAAGACCTGCAC.................................................................................................................................................................................................................25200.051100000
.........................................................................GCATCATGTTATCACACAGCCAGCAAC.............................................................................................................................................................................27200.051000010
........................................ATTCACGCCCAGTAAGACCTGCACACT..............................................................................................................................................................................................................27200.051000010
.................................................................................TTATCACACAGCCAGCAACT............................................................................................................................................................................20200.051100000
...............................................................................................................................TGCA------------------GAATCAACTGTTTGCCTGAATT......................................................................................................26200.051100000
droGri2
CAT----------------------------------------------------------------------GAATTATGTT----CGCAGCAAACGATTCACA-------AATTGTG----GCTGTGCT------------------GAGTGATTAGCAAGCTTAAATGTG---------CATCTTTTTGT--AGCA-TAGCATAAGT--A----TTTACAA----------------------ATG--AGGT---CAAGCAAATTCAAAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
GGCTTAGACACAGACAAACCAGAAAACTTGTC------GTAGTCGCGGCCATTGAGGCCAGCACATTTTAAGTGAATAAGATTATCGCAAAGCCAACAAGATA-----------TTGCT----CTA-----------TACTGATCATCAAAACGATCAGAATGCTTGCAAGTAGGTAGACAACAAGCCATTATAAAG---------------------------------------------------------C---CAAAAGAAACACAAGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................................................................................................................T----CTA-----------TACTGATCATCAAAACGATCA...................................................................................................................25200.5010010000
.....................................................................................................................................................................TGCAAGTAGGTAGACAACAAGCCA....................................................................................24200.45900090
............................TGTC------GTAGTCGCGGCCATTGAGGCCAGCA..................................................................................................................................................................................................................29200.30600060
............................................................................TAAGATTATCGCAAAGCCAACAAGA............................................................................................................................................................................25200.30606000
............................................................................TAAGATTATCGCAAAGCCAACAAGATA-----------T..............................................................................................................................................................28200.20400040
............................TGTC------GTAGTCGCGGCCATTGAGGC.......................................................................................................................................................................................................................24200.20404000
......................................................................................................................................................AACGATCAGAATGCTTGCAAG......................................................................................................21200.15330000
.......................................TAGTCGCGGCCATTGAGGCCA.....................................................................................................................................................................................................................21200.15303000
...............AAACCAGAAAACTTGTC------GTAGTCGCGG.................................................................................................................................................................................................................................2780.13101000
.......................AAACTTGTC------GTAGTCGCGGCC...............................................................................................................................................................................................................................2180.13110000
.........................ACTTGTC------GTAGTCGCGGCCATTGAG.........................................................................................................................................................................................................................2580.13101000
.................................................................................................................................................ATCAAAACGATCAGAATGCTTGCAA.......................................................................................................25200.10202000
.....................................................................................................TA-----------TTGCT----CTA-----------TACTGATCATC.............................................................................................................................21200.10202000
............................................................................................................................TA-----------TACTGATCATCAAAACGAT.....................................................................................................................21200.10202000
..................................................................TTTAAGTGAATAAGATTATCG..........................................................................................................................................................................................21200.10201100
............................................................................TAAGATTATCGCAAAGCCAACA...............................................................................................................................................................................22200.05100001
...................................................TTGAGGCCAGCACATTTTAAGTGAATT...................................................................................................................................................................................................27200.05100010
.........................................................................................................................................................................AGTAGGTAGACAACAAGCCA....................................................................................20200.05101000
............................................................................................................................................................CAGAATGCTTGCAAGTAGGTA................................................................................................21200.05101000
.....................................................................................................................CT----CTA-----------TACTGATCATCAAAACGATCA...................................................................................................................26200.05100010
...................................................................................................................................................................CTTGCAAGTAGGTAGACAACAAGCCAT...................................................................................27200.05100010
............................TGTC------GTAGTCGCGGCCATTGAGGCCACGT..................................................................................................................................................................................................................29200.05100010
....................................................TGAGGCCAGCACATTTTAAGTGA......................................................................................................................................................................................................23200.05100010
.................................................CATTGAGGCCAGCACATTTT............................................................................................................................................................................................................20200.05100010
..................................................................................................................TTGCT----CTA-----------TACTGATCATCAAA..........................................................................................................................22200.05101000
.......................................................................................CAAAGCCAACAAGATA-----------TTGCT----......................................................................................................................................................21200.05100001
..............................................................................................................................................................................GTAGACAACAAGCCATTATAAAG---------------------------------------------------------C---CAA............27200.05101000
............................................................................................................................TA-----------TACTGATCATCAAAACGA......................................................................................................................20200.05110000
.....................................................................................................................................................................TGCAAGTAGGTAGACAACAAGCCATA..................................................................................26200.05101000
...........................................................................ATAAGATTATCGCAAAGCCAACAAGA............................................................................................................................................................................26200.05100010
....................................................................TAAGTGAATAAGATTATCGCAAAGCCA..................................................................................................................................................................................27200.05100010
..................................................................................................................................................TCAAAACGATCAGAATGCTTG..........................................................................................................21200.05100010
...........................................................................................................................................................................TAGGTAGACAACAAGCCATTATAAAG---------------------------------------------------------...................26200.05100010
.....................................................................................................TA-----------TTGCT----CTA-----------TACTGATCATCAAAAC........................................................................................................................26200.05101000
...................................................................................................................................................CAAAACGATCAGAATGCTTGC.........................................................................................................21200.05101000
.................................................................................................................................................................TGCTTGCAAGTAGGTAGACAACAAGCCA....................................................................................28200.05101000
.................................................CATTGAGGCCAGCACATTTTAAGTGA......................................................................................................................................................................................................26200.05100010
................................................................................................................................................................................AGACAACAAGCCATTATAAAG---------------------------------------------------------C---CAAA...........26200.05101000
......................................................................................................................................................................GCAAGTAGGTAGACAACAAGC......................................................................................21200.05100001
..CTTAGACACAGACAAACCAGA..........................................................................................................................................................................................................................................................21200.05101000
......................................................................................................................................................................................CAAGCCATTATAAAG---------------------------------------------------------C---CAAAAGAAACAC...28200.05100010
............................................................................TAAGATTATCGCAAAGCCAACAAGATA-----------...............................................................................................................................................................27200.05101000
dp5
CTTT--GAAA---------------TGTCATC------ACCCACAAGGCCAGAAAATCCAGCGCATTTTGCGTGCACTACGCTGTCGCAGAGCCAGCAGGGGATAATCGGCTGA-----------------------------TCGT--GGCTGATCT----GCTT---ATTG---------CATGATTTTTTGGCG---CAGAAAAA-----AATA-------AA-----------------T-------------------------AAATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................................................TGTCGCAGAGCCAGCAGGGG...........................................................................................................................................................................202017.353470335110000100
..................................................................................TGTCGCAGAGCCAGCAGGG............................................................................................................................................................................192010.10202019800004000
..................................................................................TGTCGCAGAGCCAGCAGGGGA..........................................................................................................................................................................21202.5050002102700200
..................................................................................TGTCGCAGAGCCAGCAGGGGAT.........................................................................................................................................................................22200.751501110201000
..................................................................................................GGGGATAATCGGCTGA-----------------------------TCGT--GG..........................................................................................................................22180.56100300001600
.................................................................................CTGTCGCAGAGCCAGCAGGGG...........................................................................................................................................................................21200.55110000800300
.............................................................................................................................................................................................TTTTGGCG---CAGAAAAA-----AAA.........................................................1920.5010100000000
..................................................................................TGTCGCAGAGCCAGCAGGTT...........................................................................................................................................................................20200.4590900000000
.................................................................................CTGTCGCAGAGCCAGCAGGGGAA.........................................................................................................................................................................23200.4080800000000
..................................................................................TGTCGCAGAGCCAGCAGGGGT..........................................................................................................................................................................21200.3570070000000
..................................................................................TGTCGCAGAGCCAGCAGGGGAA.........................................................................................................................................................................22200.3570000700000
..............................................................................................................................................................................................TTTGGCG---CAGAAAAA-----AAA.........................................................1830.3310100000000
..................................................................................TGTCGCAGAGCCAGCAGA.............................................................................................................................................................................18200.3060600000000
...............................................................................CGCTGTCGCAGAGCCAGCAGGGGA..........................................................................................................................................................................24200.2550400001000
..............................TC------ACCCACAAGGCCAGAAAATCC......................................................................................................................................................................................................................2340.2510100000000
..................................................................TTTGCGTGCACTACGCTGTCGCAGAG.....................................................................................................................................................................................26200.2550300100010
..................................................................................TGTCGCAGAGCCAGCAGGGGATT........................................................................................................................................................................23200.2040220000000
..................................................................................TGTCGCAGAGCCAGCAGGGGATA........................................................................................................................................................................23200.2040210100000
....................................................................TGCGTGCACTACGCTGTCGCAGAGCC...................................................................................................................................................................................26200.1530120000000
...................................................................................GTCGCAGAGCCAGCAGGGGAT.........................................................................................................................................................................21200.1530300000000
.................................................................................CTGTCGCAGAGCCAGCAG..............................................................................................................................................................................18200.1530300000000
.................................................................................CTGTCGCAGAGCCAGCAGG.............................................................................................................................................................................19200.1530010200000
...........................................................................ACTACGCTGTCGCAGAGCCAGCAGGG............................................................................................................................................................................26200.1530300000000
..................................................................................................GGGGATAATCGGCTGA-----------------------------TCGT--............................................................................................................................20190.1120000000200
..................................................................................TGTCGCAGAGCCAGCAGGGGC..........................................................................................................................................................................21200.1020020000000
....................................................................TGCGTGCACTACGCTGTCGCAGAGC....................................................................................................................................................................................25200.1020020000000
...............................................................................CGCTGTCGCAGAGCCAGCAGG.............................................................................................................................................................................21200.1020200000000
....................................................................TGCGTGCACTACGCTGTCGCAGAGCCA..................................................................................................................................................................................27200.1020200000000
..................................................................TTTGCGTGCACTACGCTGTCG..........................................................................................................................................................................................21200.1020100000100
............................................................................CTACGCTGTCGCAGAGCCAGCAGG.............................................................................................................................................................................24200.1020200000000
.............................................................................TACGCTGTCGCAGAGCCAGCAGGGG...........................................................................................................................................................................25200.1020000200000
...................................................................TTGCGTGCACTACGCTGTCGCAGAGC....................................................................................................................................................................................26200.1020200000000
..................................................................TTTGCGTGCACTACGCTGTCGCAGAGC....................................................................................................................................................................................27200.1020200000000
.........................................CACAAGGCCAGAAAATCCAGCGCAT...............................................................................................................................................................................................................25140.0710000000010
..................................................................................TGTCGCAGAGCCAGCAGGGGATAAAA.....................................................................................................................................................................26150.0710100000000
..................................................................................TGTCGCAGAGCCAGCAGGGGATAATCG....................................................................................................................................................................27150.0710100000000
..................................................................................TGTCGCAGAGCCAGCAGGGGATAATC.....................................................................................................................................................................26150.0710000001000
..................................................................................TGTCGCAGAGCCAGCAGGGGATAAT......................................................................................................................................................................25150.0710100000000
.......................................................................................CAGAGCCAGCAGGGGATAATCGGC..................................................................................................................................................................24160.0610100000000
.............................................................................................CAGCAGGGGATAATCGGCTGA-----------------------------TCGT--GG..........................................................................................................................27160.0610010000000
............................................................................................CCAGCAGGGGATAATCGGCTGA-----------------------------TCGT--............................................................................................................................26160.0610100000000
..........................................................................................AGCCAGCAGGGGATAATCGGCTG................................................................................................................................................................23160.0610100000000
..........................................................................................AGCCAGCAGGGGATAATCGGCTGA-----------------------------AA................................................................................................................................26160.0610100000000
......................................................................................GCAGAGCCAGCAGGGGATAATCGGC..................................................................................................................................................................25160.0610100000000
...............................................................................................GCAGGGGATAATCGGCTGA-----------------------------TCGT--GG..........................................................................................................................25160.0610100000000
..............................................................................................AGCAGGGGATAATCGGCTG................................................................................................................................................................19170.0610100000000
..............................................................................................AGCAGGGGATAATCGGCTGA-----------------------------TCG...............................................................................................................................23170.0610100000000
...................................................................................GTCGCAGAGCCAGCAGGGGATAAA......................................................................................................................................................................24170.0610100000000
.............................................................................................CAGCAGGGGATAATCGGCTG................................................................................................................................................................20170.0610100000000
.............................................................................................CAGCAGGGGATAATCGGCTGA-----------------------------TCG...............................................................................................................................24170.0610100000000
..................................................................................................GGGGATAATCGGCTGA-----------------------------TCGT--G...........................................................................................................................21180.0610000001000
.................................................................................CTGTCGCAGAGCCAGCAGGGGAT.........................................................................................................................................................................23180.0610100000000
................................................................................................CAGGGGATAATCGGCTGA-----------------------------TCGT--GT..........................................................................................................................24180.0610010000000
................................................................................................CAGGGGATAATCGGCTGA-----------------------------TCGT--GG..........................................................................................................................24180.0610100000000
...................................................................................................GGGATAATCGGCTGA-----------------------------TCGT--GG..........................................................................................................................21180.0610100000000
.................................................................................CTGTCGCAGAGCCAGCAGGGGATT........................................................................................................................................................................24180.0610100000000
....................................................................................................GGATAATCGGCTGA-----------------------------TCGT--GG..........................................................................................................................20180.0610100000000
.....................................................................................................GATAATCGGCTGA-----------------------------TCGT--GG..........................................................................................................................19190.0510100000000
.......................................................................GTGCACTACGCTGTCGCAGAG.....................................................................................................................................................................................21200.0510000000100
...................................................................TTGCGTGCACTACGCTGTCGC.........................................................................................................................................................................................21200.0510100000000
...............................................................................CGCTGTCGCAGAGCCAGCAGGG............................................................................................................................................................................22200.0510100000000
...........................................................................ACTACGCTGTCGCAGAGCCAGCAGG.............................................................................................................................................................................25200.0510000100000
.................................................................................CTGTCGCAGAGCCAGCAGGTT...........................................................................................................................................................................21200.0510100000000
....................................................................TGCGTGCACTACGCTGTCGCA........................................................................................................................................................................................21200.0510100000000
....................................................................................TCGCAGAGCCAGCAGGGGAT.........................................................................................................................................................................20200.0510000100000
............................................................................CTACGCTGTCGCAGAGCCAGC................................................................................................................................................................................21200.0510000010000
........................................................TCCAGCGCATTTTGCGTGCACTACGC...............................................................................................................................................................................................26200.0510000000100
..................................................................................................GGGGATAATCGGCTGA-----------------------------TCG...............................................................................................................................19200.0510100000000
...................................................................TTGCGTGCACTACGCTGTCG..........................................................................................................................................................................................20200.0510100000000
.............................................................................TACGCTGTCGCAGAGCCAGC................................................................................................................................................................................20200.0510100000000
........................................................................TGCACTACGCTGTCGCAGAGCCAGCA...............................................................................................................................................................................26200.0510100000000
............................................................................................CCAGCAGGGGATAATCGGCTGA-----------------------------TAA...............................................................................................................................25200.0510100000000
..................................................AGAAAATCCAGCGCATTTTG...........................................................................................................................................................................................................20200.0510000001000
....................................................................TGCGTGCACTACGCTGTCGCAGAG.....................................................................................................................................................................................24200.0510000000010
.............................................................................TACGCTGTCGCAGAGCCAGCAGGGGT..........................................................................................................................................................................26200.0510010000000
....................................................................................TCGCAGAGCCAGCAGGGGC..........................................................................................................................................................................19200.0510100000000
...............................................................................CGCTGTCGCAGAGCCAGCAGGGGC..........................................................................................................................................................................24200.0510000100000
...........................................................................ACTACGCTGTCGCAGAGCCAG.................................................................................................................................................................................21200.0510000100000
...................................................GAAAATCCAGCGCATTTTGCGTGCAC....................................................................................................................................................................................................26200.0510001000000
..................................................................................TGTCGCAGAGCCAGCAGGGGAG.........................................................................................................................................................................22200.0510010000000
................................................................................................CAGGGGATAATCGGCTGA-----------------------------TCG...............................................................................................................................21200.0510100000000
..................................................................TTTGCGTGCACTACGCTGTCGCAGA......................................................................................................................................................................................25200.0510100000000
..........................................................................CACTACGCTGTCGCAGAGCCAG.................................................................................................................................................................................22200.0510100000000
.........................................................................GCACTACGCTGTCGCAGAGC....................................................................................................................................................................................20200.0510100000000
.............................................................................TACGCTGTCGCAGAGCCAGCAGG.............................................................................................................................................................................23200.0510000100000
........................................................TCCAGCGCATTTTGCGTGCACTACGCT..............................................................................................................................................................................................27200.0510100000000
.............................................AGGCCAGAAAATCCAGCGCAT...............................................................................................................................................................................................................21200.0510100000000
.............................................................................TACGCTGTCGCAGAGCCAGCAGGGGC..........................................................................................................................................................................26200.0510100000000
...........................................................................ACTACGCTGTCGCAGAGCC...................................................................................................................................................................................19200.0510100000000
...................................................................................GTCGCAGAGCCAGCAGGGGATA........................................................................................................................................................................22200.0510100000000
................................................CCAGAAAATCCAGCGCATTTTGCGTGCAC....................................................................................................................................................................................................29200.0510100000000
...............................................................................CGCTGTCGCAGAGCCAGCAG..............................................................................................................................................................................20200.0510100000000
.........................................................................GCACTACGCTGTCGCAGAGCCC..................................................................................................................................................................................22200.0510100000000
..............................................................................ACGCTGTCGCAGAGCCAGCAGG.............................................................................................................................................................................22200.0510100000000
droPer2
TTT--GGCTATAG---------------CATC------GCTCACGAGGCCAGAAAATCCCGCGCATTTTGCGTGGACTACGCTGTCGCAGAGCCAGCAGGGGACATTTGGCTGA-----------------------------TCGT--GAGTGATCT----GCTT---CTTG---------CAGGTTTTTTTGGCG---CAGACGAC-----AGCG-------AATTCCATTTTTATTTTATTATTCAATATTT---CTAGAGAGTTGCGAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................................................................GGACATTTGGCTGA-----------------------------TCGT--GAGTGATC....................................................................................................................26201.45290290000
....................................................................................................GGACATTTGGCTGA-----------------------------TCGT--GAGTGA......................................................................................................................24200.60121100100
...................................................GAAAATCCCGCGCATTTTGCGTG.......................................................................................................................................................................................................23200.357070000
..................................................................TTTGCGTGGACTACGCTGTCGCAGAGC....................................................................................................................................................................................27200.357070000
...................................................................................................GGGACATTTGGCTGA-----------------------------TCGT--GAGTGAT.....................................................................................................................26200.204310000
....................................................................................................GGACATTTGGCTGA-----------------------------TCGT--GA..........................................................................................................................20200.102020000
....................................................................TGCGTGGACTACGCTGTCGCAGAG.....................................................................................................................................................................................24200.102002000
...............................................................................................................TGA-----------------------------TCGT--GAGTGATCT----GCTT---CTTG---------CAGG.......................................................................................28200.102020000
....................................................................................TCGCAGAGCCAGCAGGGGAC.........................................................................................................................................................................20200.102200000
TTT--GGCTATAG---------------CATC------GCTCACG....................................................................................................................................................................................................................................22140.071010000
..........TAG---------------CATC------GCTCACGAGGCCAGAAAA.........................................................................................................................................................................................................................25140.071010000
........TATAG---------------CATC------GCTCACGAGGC................................................................................................................................................................................................................................20140.071000001
..........................................................................................AGCCAGCAGGGGACATTTGGCTGT-----------------------------..................................................................................................................................24200.051010000
..................................................................................................GGGGACATTTGGCTGA-----------------------------TCGT--GAG.........................................................................................................................23200.051010000
.............................................................................................CAGCAGGGGACATTTGGC..................................................................................................................................................................18200.051000001
..........................................................................GACTACGCTGTCGCAGAGC....................................................................................................................................................................................19200.051000001
................................................................................GCTGTCGCAGAGCCAGCAGG.............................................................................................................................................................................20200.051010000
...............................................................................................................................................TCGT--GAGTGATCT----GCTT---CTTG---------CA.........................................................................................23200.051010000
..................................................................................TGTCGCAGAGCCAGCAGGGGACATTT.....................................................................................................................................................................26200.051001000
..............................................................GCATTTTGCGTGGACTACGCTGTCG..........................................................................................................................................................................................25200.051010000
...................................................................................................GGGACATTTGGCTGA-----------------------------TCGT--GAGTGAAA....................................................................................................................27200.051010000
...............................................................................................................................................TCGT--GAGTGATCT----GCTT---CTTG---------...........................................................................................21200.051010000
................................................................................GCTGTCGCAGAGCCAGCAGGGGA..........................................................................................................................................................................23200.051010000
...................................................................................................GGGACATTTGGCTGA-----------------------------TCGT--GAGT........................................................................................................................23200.051000001
.........................................................................................................TTTGGCTGA-----------------------------TCGT--GAGTGATCT----G..............................................................................................................23200.051001000
...........................................................................................GCCAGCAGGGGACATTTGG...................................................................................................................................................................19200.051000001
.....................................................................GCGTGGACTACGCTGTCGCAGA......................................................................................................................................................................................22200.051010000
..............................TC------GCTCACGAGGCCAGAAAATCCCGT...................................................................................................................................................................................................................26200.051010000
....................................................AAAATCCCGCGCATTTTGCGTGGA.....................................................................................................................................................................................................24200.051010000
..............................TC------GCTCACGAGGCCAGAAAATCCC.....................................................................................................................................................................................................................24200.051010000
.................................................CAGAAAATCCCGCGCATTTTGCGTGG......................................................................................................................................................................................................26200.051010000
..................................................................TTTGCGTGGACTACGCTGTCG..........................................................................................................................................................................................21200.051001000
...............................................................................................GCAGGGGACATTTGGCTGA-----------------------------TCGT--............................................................................................................................23200.051010000
....................................................................TGCGTGGACTACGCTGTCGCAA.......................................................................................................................................................................................22200.051010000
....................................................................................................GGACATTTGGCTGA-----------------------------TCGT--GAGTGAC.....................................................................................................................25200.051010000
.............................................................................TACGCTGTCGCAGAGCCAGCAGGGGA..........................................................................................................................................................................26200.051000001
..................................................................................................GGGGACATTTGGCTGA-----------------------------TCGT--GA..........................................................................................................................22200.051010000
droKik1
------------------------------------------------------AGATCGGCACATCCAACGTGAGCGATATTATCGCAGAGCCAGCAGTAAA-----------CTGTGACCTGCAGCGAAGAAATTTGTTG-------------------------------------------GCCGTTTGGGCA---CG--------------------------------------------------------T----------AGGGSizeHit CountTotal NormTotal
No Reads
droFic1
---------------------------------------------CGGCCATTAAAACCAGCGCACTTAGTGTGCACTATTTTATCACACAGCCAACAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
------------------------------------------------CCAGTAAAACCGGCGCACTTGGTTTGCACCATATTTTCACACAGCCAGCAAGTCATATTAGACTGG-----------------------------TCAG--CCCTGATTA----CGAG---GCTG---------CATTTTTTGCA---GAAGCAGACTAAAT--T----TTT----AT-----------------TATTCA--T--T---TTATTTAATTACCACSizeHit CountTotal NormTotal
No Reads
droTak1
TTTT-GGAAATAA---------------GATCCCCAATACGACCATGTACGCCGACACCAGCGCACTTGCAATGCGCAGTATTCTCGCATAGCCAGCACAACAAATAAG-----TTTCG------------------------CCAG--CAATAACGC----CGTTGAACTCG---------CATTTTTTGGC---TGAGCAGGATAGACTCA----TTTTTGA----------------------ATG--CACT---C----AGGTC-ACTASizeHit CountTotal NormTotal
No Reads
dm3
--------------------------------------------------------ACTAGCGCACTTAGTATGCATCATTCTATCACATAGCCAACAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................CATTCTATCACATAGCCAAC................................................................................................................................................................................20201.15230000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003300005000000000000000100000000000000000000000000000000000000000000000000000000000000000050221000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.............................................................................CATTCTATCACATAGCCAACA...............................................................................................................................................................................21200.80160000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000402201001000000000000000000000000000000000000000000000010002000000000001000000000000000000000000000000000000
.............................................................................CATTCTATCACATAGCCAACAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------22200.50100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000001000000000000000000000000000000000000000000000000000000000000030000230000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................CATTCTATCACATAGCCA..................................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................TTCTATCACATAGCCAACA...............................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................TTCTATCACATAGCCAACAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................CATTCTATCACATAGCC...................................................................................................................................................................................17200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSec2
--------------------------------------------ACGGCCATTAAAACCAGCGCACTTAGTATGCACCATTCTATCACACAGCCAACAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................................TAAAACCAGCGCACTTAGTAT........................................................................................................................................................................................................21200.0511000
....................................................TAAAACCAGCGCACTTAGTATG.......................................................................................................................................................................................................22200.0510010
............................................ACGGCCATTAAAACCAGCGCACTTAGTA.........................................................................................................................................................................................................28200.0510001
...................................................TTAAAACCAGCGCACTTAGTATGCACCA..................................................................................................................................................................................................28200.0511000
....................................................TAAAACCAGCGCACTTAGTATGC......................................................................................................................................................................................................23200.0510010

Generated: 05/15/2015 at 06:22 PM