ID:

dvi_4094

 Coordinate:

scaffold_12855:5730725-5730882 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.3 -12.3 -11.5 -11.5

Flybase annnotation

CDS [Dvir\GJ10912-cds]; exon [dvir_GLEANR_10805:1]; CDS [Dvir\GJ10912-cds]; exon [dvir_GLEANR_10805:2]; intron [Dvir\GJ10912-in]

No Repeatable elements found

Sense Strand Reads

----------########################################--------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TGCCGCAAACATGTCGCTAACAATGCGAATTTTCACAGTATCGCGCAATGGTTAGTGAAAAGCTGGGCTTTCAATTAATTCAATTCGATAAACATATTTATATTCAAATTCATTAAATGAGGTTACGTAACCTTATGTCATAGTAAATCAGATTTGCTAGTGTCAATTTTTTGCTTGGATTCAATAATATAATATGTTTTCTGCACAGGTCAGCGGATGTTTGGCACTAACGGCGCACGTATGCTGTCTGCCAATAGA
**********************************************************************************....((...((((........((..(((.((((.((((((((....))))))))....)))).)))..)).......))))....))***************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060668
160x9_males_carcasses_total
 SRR060667
160_females_carcasses_total
 SRR060665
9_females_carcasses_total
 M061
embryo
 SRR060664
9_males_carcasses_total
 SRR060671
9x160_males_carcasses_total
 V053
head
 SRR060672
9x160_females_carcasses_total
 SRR060679
140x9_testes_total
 SRR1106729
mixed whole adult body
 SRR060686
Argx9_0-2h_embryos_total
 V116
male body		 M028
head
 SRR060669
160x9_females_carcasses_total
 SRR060670
9_testes_total
 SRR060673
9_ovaries_total
 SRR060674
9x140_ovaries_total
 SRR060682
9x140_0-2h_embryos_total
 V047
embryo
 SRR060659
Argentina_testes_total
 SRR1106716
embryo_4-6h
 SRR1106725
embryo_14-16h
 SRR1106713
embryo_0-2h
 SRR1106720
embryo_8-10h
 SRR1106722
embryo_10-12h
 SRR1106715
embryo_4-6h
 SRR1106724
embryo_12-14h
 SRR1106727
larvae
..........................GAATTTTCACAGTATCGCGCAA.................................................................................................................................................................................................................. 22 0 1 3.00 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................CGGCGCACGTATGCTGTCTGCC...... 22 0 1 2.00 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................GGTCAGCGGATGTTTGGCACTAAA........................... 24 1 1 2.00 2 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................AACAATGCGAATTTTCACAGT........................................................................................................................................................................................................................... 21 0 1 2.00 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................CGCACGTATGCTGTCTGCCAATAGA 25 0 1 2.00 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.GCCGCAAACATGTCGCTAACAATGC........................................................................................................................................................................................................................................ 25 0 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TGTTTGGCACTAACGGCGCACGTATGCT............. 28 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................AGCGGATGTTTGGCACTAACGGC........................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................TTTTCACAGTATCGCGCAATGGTCAG........................................................................................................................................................................................................... 26 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................TAACGGCGCACGTATGCTGTCTGCCA..... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................GAATTTTCACAGTATCGCGCCA.................................................................................................................................................................................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....CCAAACATGTCGCTAACAATGCGAA..................................................................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................ACAATGCGAATTTTCACAGT........................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................AATCAGATTTGCTAGTGTCAATTT......................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................GCGGATGTTTGGCACTAACGGCG....................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................TTCACAGTATCGCGCAATGGTCAGCGGA....................................................................................................................................................................................................... 28 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................AATGCGAATTTTCACAGTATCGCG..................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................CCTTATGTCATAGTAAATCAGATTTGC..................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................ATTCGATAAACATATTTATA............................................................................................................................................................ 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TGTTTGGCACTAACGGCGCACGTATGC.............. 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................ATCGGATGTTTGGCACTAACGGCGCAC.................... 27 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................TTTTCACAGTATCGCGCAA.................................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................CACAGTATCGCGCAATGGTC............................................................................................................................................................................................................. 20 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................TAACAATGCGAATTTTCACAGTATCG....................................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GATGTTTGGCACTAACGG......................... 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................AATTTTCACAGTATCGCGCAAT................................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................CACAGTATCGCGCAATGGTCAGC.......................................................................................................................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................ATGGTCAGCGGATGTTTGGCA................................ 21 2 2 1.00 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................CGGCGCACGTATGCTGTCTGCCA..... 23 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................AATGGTCAGCGGATGTTTGGCACTAA............................ 26 2 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GATGTTTGGCACTAACGGCG....................... 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TGGCACTAACGGCGCACGTA................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................TAACAATGCGAATTTTCACAGTAT......................................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................TTCACAGTATCGCGCAATGGTCAGCGG........................................................................................................................................................................................................ 27 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................ACGGCGCCCGTATGCTGTCTGCCA..... 24 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................CGTATGCTGTCTACCAATA.. 19 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................GGTCAGCGGATGTTTGGCACTAAC........................... 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....GCAAACATGTCGCTAACAATGCGAAT.................................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........TGTCGCTAACAATGCGAATTTTCA............................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................CAGCGGATGTTTGGCACT.............................. 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................ACGGCGCACGTATGCTGTCT......... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................TTTGGCACTAACGGCGCACGTA................. 22 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................AACAATGCGAATTTTCACAGTATCG....................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................CAATGGTTAGTGAAAAGCTGG................................................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................ACGGCACACGTATGCTGTCT......... 20 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................GCAATGGTTAGTGAAAAGCTGGGC.............................................................................................................................................................................................. 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................GGTCAGCGGATGTTTGGCACTA............................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................GTTTGGCACTAACGGCGCACG................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................TGCTTGGACTCAATA........................................................................ 15 1 14 0.64 9 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 2 2 1 1 1 0 0 0
................................TGACAGTGTCGCGAAATGGTT............................................................................................................................................................................................................. 21 3 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................GCAATGGTCAGCGGATGTTT.................................... 20 2 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................AATGGTCAGCGGATGTTTGGCA................................ 22 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................TGCTTGGAATCAATA........................................................................ 15 1 20 0.40 8 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 1 1
.............................................................................................................................................................................................................CGGGTCAGCGGTTATTTGGC................................. 20 3 6 0.17 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TGAAAAGCAGGGCTT............................................................................................................................................................................................ 15 1 11 0.09 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................ATTAATTGAGGTTGCGTA................................................................................................................................. 18 2 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..................................................ATTAGTAAAACGCTGGGCT............................................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................TAACAATGCGAAGATTCA............................................................................................................................................................................................................................... 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

ACGGCGTTTGTACAGCGATTGTTACGCTTAAAAGTGTCATAGCGCGTTACCAATCACTTTTCGACCCGAAAGTTAATTAAGTTAAGCTATTTGTATAAATATAAGTTTAAGTAATTTACTCCAATGCATTGGAATACAGTATCATTTAGTCTAAACGATCACAGTTAAAAAACGAACCTAAGTTATTATATTATACAAAAGACGTGTCCAGTCGCCTACAAACCGTGATTGCCGCGTGCATACGACAGACGGTTATCT
*****************************************************************************************....((...((((........((..(((.((((.((((((((....))))))))....)))).)))..)).......))))....))********************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060660
Argentina_ovaries_total
 SRR060658
140_ovaries_total
 SRR060675
140x9_ovaries_total
 V053
head
 SRR060682
9x140_0-2h_embryos_total
..................................................................................................................................................................................................................................GGTTGCCGCGTGCATACGACA........... 21 1 1 3.00 3 3 0 0 0 0
.....................................................TCACTTTTCGACCCGGGAGTT........................................................................................................................................................................................ 21 2 1 1.00 1 0 0 1 0 0
...................................GTCATAGCGCGTTACCAATCACTTT...................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0
.......................................................................................................................................................................................................................................CCGAGTGGATTCGACAGACGGT..... 22 3 1 1.00 1 0 0 0 1 0
......................TGGGCTTTAAAGTGTCATAG........................................................................................................................................................................................................................ 20 3 6 0.17 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12855:5730675-5730932 + dvi_4094 TGCCGCAAACATGTCGCTAACAATGCGAATTTTCACAGTATCGCGCAATGGTTAGTGAAAAGCTG--G---------GCTTTCAATTAAT-------------------------TCA--ATTCGATA-AAC----ATATTTATATTC------AAA-TTC--ATTAAATGAGGTTACGTAACCTTATGTCATAGTAA-ATCAGAT--------------TTGCTAGTGTCAATTTT-TT---G----------------CTTGGATTCAATAA---TATAATATGT---------TTTCTGCACAGGTCAGCGGATGTTTGGCACTAACGGCGCACGTATGCTGTCTGCCAATAGA
droMoj3 scaffold_6540:6054410-6054667 + TGCCGCAAACATGTCGCTAACAATACGTATTTTCACACTCTCGCGTAATGGTTAGTAAAAGAACAGTGTCAATCATTAATACAATATA-----ATAAACACAATTATGGT--------------------------------------------TCATTTA--ATCGAATGAGGTTATGTAACCTTATGTCATAGAGAAAACAAAT------C-----T-TCAATAATTTCAAGTTTACTATTTGAA-------------------TCAAATAA---TA--TAATGA---------TTTCTAATCAGGTCAGCGCATGTTTGGCACCAATGGCGCACGCCTGTTTGCCGCCCAA---
droGri2 scaffold_14906:8272865-8273138 - TGCCGTAAACATGTCGCTAACAATGCGAATTTTCACAGCATCGCGCCATGGTTAGTGTCTAATTA--T---------CGTA---------------------------------TGCA--TCCAATTA-AATTA---AACAATATTAA------CAATTGTTAATTTTATGAGGTTATGTAACCTTATGTCATAGTAA-AGTAAAG-----CAA--AAA-TTGCCACTGCTCGGATAATTCTTGATGT-----G-C-CGGATACAATATAATGATAGAA--ATATGA---------TTTGTATGCAGGTCAGCGCATGTTCGGCACTACAGGCGCACGTATGCTGGCTGCCCAGAAA
droWil2 scf2_1100000004943:15805787-15806071 + GGCCGTCAACATGTCGCTTACAATGCGAATTTTCAATGCATCGCGCAATGGTTAGTGCTTAAA----A---------CACTTGATCGCCCTCA-------------TTGTCCATT-----TAATCGAA-TA-----TAATTGGCAAAAAAGTAACAA-TGA--GTTATGTTAGGTTATGTAAGCTTATGTCATAGAAA-AACAATTTGGCAGTCTATAAAAAA-------CAGAATTATT-------------------GTTGCAAAATAATAA---CA--AAATGTCGTTCATTCGTTTCCATCAGGTCAGCGCATGTTTGGGACCCAAGGAGCTCGCATGCTGGCCGCTAAAAGG
dp5 2:20341211-20341502 - CGCCGCAGACATGTCGCTTACTATGCGAATTTTCACAGCATCCCGCAATGGTTAGTGGTTGGGCAGTAGCTTGCCTTGCACTCAAAGC-------------------------GCGAC--ATGCGAAA-TACCC-GACTATTCCATGG------GCATCGC--ATTGAGTGAGGTTATGTAAGCTTATGTCATAGCAA-AACAAAG-----GACTAAAG-TGGCCAATTATTG-TTC----CGCGGC-GGCTC-ACACAAGTGCACTGTATTGA---CG--ATATGT---------CTCCCCCGCAGGTCAGCGCATGTTTCGCACCAATGGCGCCTGCTTGCTGGCCGCCAAGCGG
droPer2 scaffold_3:3092702-3092992 - -GCCGCAGACATGTCGCTTACTATGCGAATTTTCACAGCATCCCGCAATGGTTAGTGGCTGGGCAGTAGCTTGCCTTGCACTCAAAGC-------------------------GCGAC--ATGCGAAA-TACCC-GACTATTCCATGG------GCATCGC--ATTGAGTGAGGTTATGTAAGCTTATGTCATAGCAA-AACAAAG-----GACTAAAG-TGGCCAATTATTG-TTC----CGCGGC-GGCTC-ACACAAGTGCACTGTATTAA---CG--ATAGGT---------CTCCCCCGCAGGTCAGCGCATGTTTCGCACCAATGGCGCCTGCTTGCTGGCCGCCAAGCGG
droAna3 scaffold_13340:16267347-16267626 - dan_3126 -GCCACAAACATGTCGCTAACTATGCGAATTTTCACCGCATCGCGCAATGGTTAGTGGCGAATGGAAA---------GCTTAAATCTCACTCA-------------C----TTCCAAG--CGCTGGAA-AACCGTGAAAACTGGCGAA------AAATAGC--GCTTAGTGAGGTTATGTAAGCTTATGTCATAGCAA-AACAAAG-----GACAAAAT-TGGATAAATAAATGATTTTC------------------ATGAGTGATTTAACGC---TG--GATTGG---------TTCCTCCTCAGGTCAGCGCATGTTTGGCACCCACGGCGCCAGGATGCTGGCTGCTCAAAAG
droBip1 scf7180000396708:3777162-3777441 + -GCCGCAAACATGTCGCTAACTATGCGAATTTTCACCGCATCGCGCAATGGTTAGTGGCGAATGGAAA---------GCTTTTATCTTACTCA-------------C----TTTCAAG--CGCCGAAA-AACCGTAAAATCTGGGGAA------AAATAGC--GCCGAGTGAGGTTATATAAGCTTATGTCATAGCAA-AACAAAG-----GACAAAAT-TGAATAAATAATTGATT----------------T-T-AACCAGTGATTTAACTA---TG--GATTGG---------TTCCTCCGCAGGTCAGCGCATGTTTGGCACCCATGGCGCCAGGTTGCTGGCCGCCCAAAAG
droKik1 scf7180000302639:1021209-1021496 + -GCCGCAAACATGTCGCTAACTATGCGAATTTTCAACGCATCGCGCAATGGTTAGTGAGTTTCCTAAAGGTTT----CCCCCCGCTCTCA-----------------------GCGCGATTCGTGGAA-CCGTT-CAAAATTCCGTAG------AAATCGC--GTCGAGTGAGGTTATGTAAGCTTATGTCATAGCAA-AACAAAG-----GACCAAAT-CGG-TCATATAAAGCTT----CCCGGC-GATGT-ATAAAGGCGCGATTTAATGG---CA--AAATGA---------CTCGCCCGCAGGTCAGCGCATGTTTGGCAGCCAAGGGGCCCGGCTGATGGCCGCA---CGG
droFic1 scf7180000452523:1035334-1035612 - --CCGCAAACATGTCGCTTACTATGCGAATTTTCACCGCATCGCGCAATGGTAGGTGCTCAGCTT--C---------CCCATTACCTC-------------------------TTGAC--TCCCGGAA-AATCC-GAATTTTCCGTAG------AAACTGC--TCCAAATGAGGTTATGTAAGCTTATGTCATAGCAA-AACAAAG-----GACTAAAT-TGGCTTATTTACAAAATACCCTTAAATA-----T-T-TAAATGTGATTTAATGG---CA--AAATGT---------TTTCCCCACAGGTCAGCGCATGTTTGGCAGCCAGGGAGCCTGTCTTTTTGCCGCCAAACGC
droEle1 scf7180000491080:1439379-1439659 - GGCCGCAAACATGTCGCTTACTATGCGAATTTTCACCGCATCGCGCACTGGTAGGTGTCTAACAA--G---------CGTCTTAGCTC-------------------------TAGCC--CTCCGAAA-ATTCC-AAAATTTCCCTTG------AAATACC--GTCGAGTGAGGTTATGTAAGCTTATGTCATAGCAA-AACAAAG-----GCCAAAAT-GGACTAATTTGAGGATTCTTATTGCAAA-----T-A-AGACTGTGATTTAATGG---TA--TAATGT---------GTCCCCCATAGGTCAGCGCATGTTTGGCAGCCAGGGAGCCCGCCTGCTGGCCGCCCAGCGA
droRho1 scf7180000758667:67182-67462 - GGCCACAAACATGTCGCTAACTATGCGAATTTTCACCGCATCGCGCACTGGTAGGTGTCTAACAA--T---------CCTCCCACCTC-------------------------TTGAT--AGCCGGTA-AACCC-AAAATTTCAGTGA------AATTTGC--ATCGAGTGAGGTTATGTAAGCTTATGTCATAGCAA-AACAAAG-----GACTAAAT-GGGATAATTTGATGATCCTTATTGCAAA-----A-A-AGAATGTAAATTAATGG---TA--TAATGT---------GTCTCCCATAGGTCAGCGCATGTTTGGCAGCCATGGAGCCCGCCTGTTGGCCGCCCAGCGA
droBia1 scf7180000302136:1264285-1264576 - GGCCGCAAACATGTCGCTAACAATGCGAATTTTCACCGCATCGCGCAATGGTAGGTGGCCAAGCA-AT---------ACCCCCACCTCTTTCC-------------C----TCTCGAT--TTCCGGAAAACCCGTGAAAAATCCATGA------AAATCGC--ATTGAGTGAGGTTATGTAAGCTTATGTCATAGCAA-AACAAAG-----GACTAAAT-TGGCTTATTCGAGGATGGTTTTTGGTTT-----A-G-ACTCTGTAAATCAATGG---AT--AAATGT---------TTTCCCCGCAGGTCAGCGCATGTTTGGCAGCCAGGGAGCCCGTCTGCTGGCCGCCCAGCGA
droTak1 scf7180000415170:59239-59530 + GGCCGCAAACATGTCGCTAACAATGCGAATTTTCACCGCATCGCGCAATGGTAGGTGGCCCAGCA-AA---------CCCCACATCTCCTTCC-------------C----TCTAGAT--CAGCTGAAAATCCGTGAAAAATGCATAA------AAATTGC--GCCCAGTGAGGTTATGTAAGCTTATGTCATAGCAA-AACAAAG-----GACTAAAT-GGGCTTATTTGAGGATTATATTTGCTTA-----A-G-AGGCTGTAAATTAAAAG---TT--TATTAC---------CTCCCCCACAGGTCAGCGCATGTTTGGCAGCCAGGGCGCCCGTCTGCTGGCCGCCCAGCGC
droEug1 scf7180000409797:1875658-1875937 + GGCCGCAAACATGTCGCTAACAATGCGAATTTTCACCGCGTCGCGCAATGGTAGGTGGCAAACAA--T---------ACCCTCACCTC-------------------------GCGAT--ACGCGAAA-AACTT-AAACTTTCCCAGG------AAATCTTTGTCTCTGTGAGGTTATGTAAGCTTATGTCATAGCAA-AACAAAG-----GACTAAAT-GAGCTCAATTCAGGATTCTTATTGCTTA-----G-A-CCGTTGCAATTTAATTT---AA--AAATGA---------ATTTCCCACAGGTCAGCGCATGTTTGGGAGCCAAGGAGCCCGTCTGCTGGC---CCAGCGA
dm3 chr3R:11662479-11662760 - -GTCGCAAAAATGTCGCTAACTATGCGAATTTTCACCGCATCGCGCAACGGTAGGTGGCGACCCA--T---------CCCCTCACATCCG-----------------------TTGTT--TTCCGGGA-AATTT-CCCATTTTCGTGG------AAATCGC--GGCGAGTGAGGTTATGTAAGCTTATGTCATACCAA-AACAAAA-----GTCTAAAC-TCGCTTAATTCAGTATAACTTTTCGACT-----T-A-AGCATGTTATTTAATGG---TA--AAATGT---------TCTCCCCACAGGACAGCGCCTGTTTGGCAGCCATGGAGCCCGGCTGCTGGCCGCCCAGCGA
droSim2 3r:9583530-9583813 + -GTCGCAAACATGTCGCTAACTATGCGAATTTTCACCGCATCGCGCAACGGTAGGTTGCGACCCA--T---------CCCCTCACATCCG-----------------------TTGTT--TTCCGGGA-AATTT-CGCATTTTCGTGG------AAATCGC--GGCGAGTGAGGTTATGTAAGCTTATGTCATACCAA-AACAAAA-----GTCTAAAC-TCGCTTATTTGTGTATAACTATTCGACT-----TATAACGTGCTTATTTAATGG---TA--AAATGT---------TCTCCCCACAGGACAGCGCCTGTTTGGCACGCATGGAGCCCGTCTGCTGGCCGCCCAGCGT
droSec2 scaffold_0:10291968-10292249 + -GTCGCAAACATGTCGCTAACTATGCGAATTTTCACCGCATCGCGCAACGGTAGGTTGCGACCCA--T---------CCCCTCACATCCG-----------------------TTGTT--TTCCGGGA-AATTT-CGCATTTTCGTGG------AAATCGC--GGCGAGTGAGGTTATGTAAGCTTATGTCATACCAA-AACAAAA-----GTCTAAAC-TCGCTTATTTGTGTATAACTATTCGACT-----T-A-AGTACGTTATTTAATTG---TA--AAATGT---------TCTCCCAACAGGACAGCGCCTGTTTGGCAGCCATGGCGCCCGTCTGCTGGCCGCCCAGCGA
droYak3 3R:14774720-14775001 + -GTCGCAAACATGTCGCTATCTATGCGAATCTTCACCGCATCGCGCAACGGTAGGTGGAGACACA--A---------CACCTCACATCCA-----------------------TCGTT--TTCCGGAA-TATCT-AAAATTTCCGTGA------AAATCAC--GCCGAGTGAGGTTATGTAAGCTTATGTCATACCAA-AACAAAA-----GACTAAAT-TCGCTTATTTGAGGATTACTTTCCGATT-----G-A-AGAATGTAACTTAATGG---TA--AAATGT---------GCTCCCTACAGGACAGCGCATGTTTGGCAGCCATGGAGCCCGTCTGCTGGCCGCCCAGCGA
droEre2 scaffold_4770:11187299-11187581 - -GTCGCAAACATGTCGCTATCTATGCGAATCTTCACCGCATCGCGCAACGGTAGGTGGCGACCCA--A---------CCCCTCACATCCT-----------------------TCGTT--TTCCGGGA-AATCTAAAAATTTCCGTGA------AAATCGC--GCCGAGTGAGGTTATGTAAGCTTATGTCATACCAA-AACAATA-----GACTAAAT-TCGCTTATTTGAAGATTAATTTCCGTTT-----T-A-AGAATATAATTTAATAG---TA--AAATGT---------GCTCCCCACAGGTCAGCGCATGTTTGGCAGCCATGGAGCCCGTCTGCTGGCCGCCCAGCGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TGCCGCAAACATGTCGCTAACAATGCGAATTTTCACAGTATCGCGCAATGGTTAGTGAAAAGCTG--G---------GCTTTCAATTAAT-------------------------TCA--ATTCGATA-AAC----ATATTTATATTC------AAA-TTC--ATTAAATGAGGTTACGTAACCTTATGTCATAGTAA-ATCAGAT--------------TTGCTAGTGTCAATTTT-TT---G----------------CTTGGATTCAATAA---TATAATATGT---------TTTCTGCACAGGTCAGCGGATGTTTGGCACTAACGGCGCACGTATGCTGTCTGCCAATAGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................GAATTTTCACAGTATCGCGCAA.....................................................................................................................................................................................................................................................................................................................2213.003001000000000000001100000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................CGGCGCACGTATGCTGTCTGCC......2212.002001000000000000100000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................GGTCAGCGGATGTTTGGCACTAAA...........................2412.002000000000000000000000010000000000000100000000000000000000000000
..................AACAATGCGAATTTTCACAGT..............................................................................................................................................................................................................................................................................................................................2112.002000000000000001000010000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................CGCACGTATGCTGTCTGCCAATAGA2512.002000000000000000101000000000000000000000000000000000000000000000
.GCCGCAAACATGTCGCTAACAATGC...........................................................................................................................................................................................................................................................................................................................................2512.002001100000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TGTTTGGCACTAACGGCGCACGTATGCT.............2811.001000000000000001000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................AGCGGATGTTTGGCACTAACGGC........................2311.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................TAACGGCGCACGTATGCTGTCTGCCA.....2611.001000000000000000000100000000000000000000000000000000000000000000
...................ACAATGCGAATTTTCACAGT..............................................................................................................................................................................................................................................................................................................................2011.001000000000000001000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................A-ATCAGAT--------------TTGCTAGTGTCAATTT.........................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................................................................................................................................GCGGATGTTTGGCACTAACGGCG.......................2311.001001000000000000000000000000000000000000000000000000000000000000
.....................AATGCGAATTTTCACAGTATCGCG........................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000001000000000000000000000000000000
......................................................................................................................................................................................CCTTATGTCATAGTAA-ATCAGAT--------------TTGC.....................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................ATTCGATA-AAC----ATATTTATA....................................................................................................................................................................................................................2011.001000000000000000000100000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TGTTTGGCACTAACGGCGCACGTATGC..............2711.001000000000000000000000000100000000000000000000000000000000000000
.............................TTTTCACAGTATCGCGCAA.....................................................................................................................................................................................................................................................................................................................1911.001000000000000000100000000000000000000000000000000000000000000000
.................................CACAGTATCGCGCAATGGTC................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000100000000000000000000000000000000000000000
.................TAACAATGCGAATTTTCACAGTATCG..........................................................................................................................................................................................................................................................................................................................2611.001000000000000000000100000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................GATGTTTGGCACTAACGG.........................1811.001000000000000000000000000000000000000000000000000000000000000100
...........................AATTTTCACAGTATCGCGCAAT....................................................................................................................................................................................................................................................................................................................2211.001000000000000000100000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................CGGCGCACGTATGCTGTCTGCCA.....2311.001000000000000000000000100000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................GATGTTTGGCACTAACGGCG.......................2011.001000000000000000000000000000000000000000000000000000000000000100
................................................................................................................................................................................................................................................................................................................................TGGCACTAACGGCGCACGTA.................2011.001000000000000000000100000000000000000000000000000000000000000000
.................TAACAATGCGAATTTTCACAGTAT............................................................................................................................................................................................................................................................................................................................2411.001000000000000000000100000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................GGTCAGCGGATGTTTGGCACTAAC...........................2411.001000100000000000000000000000000000000000000000000000000000000000
....GCAAACATGTCGCTAACAATGCGAAT.......................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
...........TGTCGCTAACAATGCGAATTTTCA..................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................CAGCGGATGTTTGGCACT..............................1811.001000000000000000000000000000000000000000000000000000000000100000
........................................................................................................................................................................................................................................................................................................................................ACGGCGCACGTATGCTGTCT.........2011.001000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................TTTGGCACTAACGGCGCACGTA.................2211.001000000000000000000000010000000000000000000000000000000000000000
..................AACAATGCGAATTTTCACAGTATCG..........................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000100000000000000000000000000000000000000000
.............................................CAATGGTTAGTGAAAAGCTG--G---------........................................................................................................................................................................................................................................................................................2111.001000000000000000000100000000000000000000000000000000000000000000
............................................GCAATGGTTAGTGAAAAGCTG--G---------GC......................................................................................................................................................................................................................................................................................2411.001010000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................GGTCAGCGGATGTTTGGCACTA.............................2211.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................GTTTGGCACTAACGGCGCACG...................2111.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
TGCCGCAAACATGTCGCTAACAATACGTATTTTCACACTCTCGCGTAATGGTTAGTAAAAGAACAGTGTCAATCATTAATACAATATA-----ATAAACACAATTATGGT--------------------------------------------TCATTTA--ATCGAATGAGGTTATGTAACCTTATGTCATAGAGAAAACAAAT------C-----T-TCAATAATTTCAAGTTTACTATTTGAA-------------------TCAAATAA---TA--TAATGA---------TTTCTAATCAGGTCAGCGCATGTTTGGCACCAATGGCGCACGCCTGTTTGCCGCCCAA---SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........................TATTTTCACACTCTCGCGTAAT....................................................................................................................................................................................................................................................................................................................2211.001100000
............................ATTTTCACACTCTCGCGT.......................................................................................................................................................................................................................................................................................................................1811.001100000
.....................................................................................................................................................................CGAATGAGGTTATGTAACC.............................................................................................................................................................................1911.001100000
......................ATACGTATTTTCACACTCTCGCGT.......................................................................................................................................................................................................................................................................................................................2411.001000001
..........................GTATTTTCACACTCTCGCGT.......................................................................................................................................................................................................................................................................................................................2011.001000001
...CGCAAACATGTCGCTAACAATA............................................................................................................................................................................................................................................................................................................................................2211.001000001
TGCCGCAAACATGTCGCTAACAATACG..........................................................................................................................................................................................................................................................................................................................................2711.001100000
.................................................................................................................................................................................................................................................................................................................................GGCACCAATGGCGCACGCCTGTT.............2311.001100000
.............................................................................................................................................................................................................................................................................................................................GTTTGGCACCAATGGCGCACGCCTGTT.............2711.001100000
......AAACATGTCGCTAACAATACGT.........................................................................................................................................................................................................................................................................................................................................2211.001000001
.........................................................................................................................................................................................................................................................................................................................................TGGCGCACGCCTGTTTGCC.........1911.001100000
..........................GTATTTTCACACTCTCGCGTAAT....................................................................................................................................................................................................................................................................................................................2311.001000001
...CGCAAACATGTCGCTAACAATACGT.........................................................................................................................................................................................................................................................................................................................................2511.001001000
..................................................................................................................................................................................................................................................................................................................GGTCAGCGCATGTTTGGC.................................1811.001100000
...................................................................................................................................................................................................................................................................................................................................CACCAATGGCGCACGCCTGTT.............2111.001100000
.........................CGTATTTTCACACTCTCGCGTAAT....................................................................................................................................................................................................................................................................................................................2411.001100000
droGri2
TGCCGTAAACATGTCGCTAACAATGCGAATTTTCACAGCATCGCGCCATGGTTAGTGTCTAATTA--T---------CGTA---------------------------------TGCA--TCCAATTA-AATTA---AACAATATTAA------CAATTGTTAATTTTATGAGGTTATGTAACCTTATGTCATAGTAA-AGTAAAG-----CAA--AAA-TTGCCACTGCTCGGATAATTCTTGATGT-----G-C-CGGATACAATATAATGATAGAA--ATATGA---------TTTGTATGCAGGTCAGCGCATGTTCGGCACTACAGGCGCACGTATGCTGGCTGCCCAGAAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
GGCCGTCAACATGTCGCTTACAATGCGAATTTTCAATGCATCGCGCAATGGTTAGTGCTTAAA----A---------CACTTGATCGCCCTCA-------------TTGTCCATT-----TAATCGAA-TA-----TAATTGGCAAAAAAGTAACAA-TGA--GTTATGTTAGGTTATGTAAGCTTATGTCATAGAAA-AACAATTTGGCAGTCTATAAAAAA-------CAGAATTATT-------------------GTTGCAAAATAATAA---CA--AAATGTCGTTCATTCGTTTCCATCAGGTCAGCGCATGTTTGGGACCCAAGGAGCTCGCATGCTGGCCGCTAAAAGGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................................................................................................................................................................................................................................................................................AGGAGCTCGCATGCTGGCCGCT......2212.00201010
..............................................................................................................................................................................................................................................................................................................................TTTGGGACCCAAGGAGCTCGC..................2112.00220000
..................................................................................................................................................................................................................................................................................................................GGTCAGCGCATGTTTGGGACC..............................2112.00201100
...............................................................................................................................................................................................................................................................................................................................TTGGGACCCAAGGAGCTCGCATGCTG............2612.00210010
...........................................................................................................................................................................................................................................................................................................................ATGTTTGGGACCCAAGGAGCT.....................2111.00100010
....................................................................................................................................................................................................................................................................................................................................ACCCAAGGAGCTCGCATGCTGGCCGCT......2711.00100100
........................................................................................................................................................................................................................................................................................................................................AAGGAGCTCGCATGCTGGCC.........2011.00100100
...................................ATGCATCGCGCAATGGTC................................................................................................................................................................................................................................................................................................................1811.00100010
.............................................................................................................................................................................................................................................................................................................................GTTTGGGACCCAAGGAGCTCGCAT................2411.00101000
.............................................................................................................................................................................................................................................................................................................................GTTTGGGACCCAAGGAGCT.....................1911.00100010
....GTCAACATGTCGCTTACAA..............................................................................................................................................................................................................................................................................................................................................1911.00101000
....................................................................................................................................................................................................................................................................................................................................ACCCAAGGAGCTCGCATGCTGGC..........2311.00100010
.......................................................................................................................................................................................................................................................................................................................GCGCATGTTTGGGACCCAAGG.........................2111.00100010
................................................................................................................................................................................................................................................................................................................................TGGGACCCAAGGAGCTCGCATGC..............2311.00100100
GGCCGTCAACATGTCGCTTACAAT.............................................................................................................................................................................................................................................................................................................................................2411.00101000
..........................GAATTTTCAATGCATCGCGCA......................................................................................................................................................................................................................................................................................................................2111.00101000
.........................CGAATTTTCAATGCATCGCGC.......................................................................................................................................................................................................................................................................................................................2111.00100010
.......................................................................................................................................................................................................................................................................................................................................CAAGGAGCTCGCATGCTGGCCGCT......2411.00100010
......................................................................................................................................................................................................................................................................................................................................CCAAGGAGCTCGCATGCTGGC..........2111.00100100
..........................GAATTTTCAATGCATCGCGCAATGGT.................................................................................................................................................................................................................................................................................................................2611.00100010
......CAACATGTCGCTTACAATGC...........................................................................................................................................................................................................................................................................................................................................2011.00100010
................CTTACAATGCGAATTTTCA..................................................................................................................................................................................................................................................................................................................................1911.00100010
.......................................................................................................................................................................................................................................................................................................................................CAAGGAGCTCGCATGCTGGCCGCTAAAA..2811.00100100
.........................................................................................................................................................................................................................................................................................................................................AGGAGCTCGCATGCTGGCCGCTAAAAG.2711.00101000
dp5
CGCCGCAGACATGTCGCTTACTATGCGAATTTTCACAGCATCCCGCAATGGTTAGTGGTTGGGCAGTAGCTTGCCTTGCACTCAAAGC-------------------------GCGAC--ATGCGAAA-TACCC-GACTATTCCATGG------GCATCGC--ATTGAGTGAGGTTATGTAAGCTTATGTCATAGCAA-AACAAAG-----GACTAAAG-TGGCCAATTATTG-TTC----CGCGGC-GGCTC-ACACAAGTGCACTGTATTGA---CG--ATATGT---------CTCCCCCGCAGGTCAGCGCATGTTTCGCACCAATGGCGCCTGCTTGCTGGCCGCCAAGCGGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................................................................................................................................................................................................................................................................................GGTCAGCGCATGTTTCGCA................................1911.0010100000000
.......GACATGTCGCTTACTATGC...........................................................................................................................................................................................................................................................................................................................................1911.0010100000000
....................................................................................................................................................................................................................................................................................................................TCAGCGCATGTTTCGCACCAATGGCGCC.....................2811.0010100000000
...............................................................................................................................................................................................................................................................................................................................TTCGCACCAATGGCGCCTGCTTGC..............2411.0010100000000
.................................................................................................................................................................................................................................AATTATTG-TTC----CGCGGC-GG...........................................................................................................1911.0010000000010
.........................................................................................................................................................................................................................................................................................ATATGT---------CTCCCCCGCAGGTCA..............................................2111.0010100000000
........................................................................................................................................ACTATTCCATGG------GCATCG.....................................................................................................................................................................................................1811.0010100000000
CGCCGCAGACATGTCGCTTACTATGCG..........................................................................................................................................................................................................................................................................................................................................2711.0010100000000
...........................AATTTTCACAGCATCCCGCA......................................................................................................................................................................................................................................................................................................................2011.0010000100000
..CCGCAGACATGTCGCTTACTATGCGAATT......................................................................................................................................................................................................................................................................................................................................2911.0010001000000
....................................................................................................................................................................................................................................................................................................................TCAGCGCATGTTTCGCACCAATGG.........................2411.0010100000000
.....................................................AGTGGTTGGGCAGTAGCTTGC...........................................................................................................................................................................................................................................................................................2111.0010000001000
.....................................................................................................................................................................................................................................................................TGCACTGTATTGA---CG--ATATGT---------CTCCCC.......................................................2711.0010000000010
CGCCGCAGACATGTCGCTTA.................................................................................................................................................................................................................................................................................................................................................2011.0010000100000
.....CAGACATGTCGCTTACTATG............................................................................................................................................................................................................................................................................................................................................2011.0010000001000
.............................................................................GCACTCAAAGC-------------------------GCGAC--ATG..........................................................................................................................................................................................................................................1911.0010100000000
......AGACATGTCGCTTACTATGC...........................................................................................................................................................................................................................................................................................................................................2011.0010000100000
............................................................................................................................................................................................................................................................................................................................................CGCCTGCTTGCTGGCCGCCAAGCG.2411.0010000100000
....GCAGACATGTCGCTTACTA..............................................................................................................................................................................................................................................................................................................................................1911.0010100000000
......................................................................................................................................................................................................................................................................GCACTGTATTGA---CG--ATATG.......................................................................1911.0011000000000
...............................................................................................................................................................................................................................................................................................................................TTCGCACCAATGGCGCCTGCTTG...............2311.0010100000000
................................................................................................................................................................................................................................................................................................................................................TGCTTGCTGGCCGCCAAGCG.2011.0010100000000
droPer2
-GCCGCAGACATGTCGCTTACTATGCGAATTTTCACAGCATCCCGCAATGGTTAGTGGCTGGGCAGTAGCTTGCCTTGCACTCAAAGC-------------------------GCGAC--ATGCGAAA-TACCC-GACTATTCCATGG------GCATCGC--ATTGAGTGAGGTTATGTAAGCTTATGTCATAGCAA-AACAAAG-----GACTAAAG-TGGCCAATTATTG-TTC----CGCGGC-GGCTC-ACACAAGTGCACTGTATTAA---CG--ATAGGT---------CTCCCCCGCAGGTCAGCGCATGTTTCGCACCAATGGCGCCTGCTTGCTGGCCGCCAAGCGGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...CGCAGACATGTCGCTTACTA..............................................................................................................................................................................................................................................................................................................................................2012.002200000
...................................................................................................................................................................................................................................................................................................................GTCAGCGCATGTTTCGCA................................1811.001100000
.....................................................................................................................................................................................................................................................................................................................CAGCGCATGTTTCGCACCAATGGC........................2411.001001000
....GCAGACATGTCGCTTACTAT.............................................................................................................................................................................................................................................................................................................................................2011.001010000
......AGACATGTCGCTTACTATGC...........................................................................................................................................................................................................................................................................................................................................2011.001010000
..........................................................................................................................................TATTCCATGG------GCATCGC--AT................................................................................................................................................................................................1911.001001000
...................................................................................................................................................................................................................................................................................................................GTCAGCGCATGTTTCGCACCAATGGCGC......................2811.001001000
...........................AATTTTCACAGCATCCCGCAAT....................................................................................................................................................................................................................................................................................................................2211.001010000
...................................................................................................................................................................................................................................................................................................................GTCAGCGCATGTTTCGCAC...............................1911.001010000
droAna3
-GCCACAAACATGTCGCTAACTATGCGAATTTTCACCGCATCGCGCAATGGTTAGTGGCGAATGGAAA---------GCTTAAATCTCACTCA-------------C----TTCCAAG--CGCTGGAA-AACCGTGAAAACTGGCGAA------AAATAGC--GCTTAGTGAGGTTATGTAAGCTTATGTCATAGCAA-AACAAAG-----GACAAAAT-TGGATAAATAAATGATTTTC------------------ATGAGTGATTTAACGC---TG--GATTGG---------TTCCTCCTCAGGTCAGCGCATGTTTGGCACCCACGGCGCCAGGATGCTGGCTGCTCAAAAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................TGCGAATTTTCACCGCATCGCGCA......................................................................................................................................................................................................................................................................................................................2413.003300000
...........................AATTTTCACCGCATCGCGCA......................................................................................................................................................................................................................................................................................................................2013.003300000
..........................GAATTTTCACCGCATCGCGCAAC....................................................................................................................................................................................................................................................................................................................2312.002020000
..........................GAATTTTCACCGCATCGCGC.......................................................................................................................................................................................................................................................................................................................2012.002020000
..............................................................................................................................................................................................................................................................................................................................................CCAGGATGCTGGCTGCTCA....1912.002200000
.........................................................................................................................................................................................................CAAAG-----GACAAAAT-TGGAA....................................................................................................................................1811.001000100
..........................GAATTTTCACCGCATCGCGCAATGGTC................................................................................................................................................................................................................................................................................................................2711.001010000
........................................................................................................................................................................................................................................................................................................................CGCATGTTTGGCACCCACGGCG.......................2211.001100000
...................................................................................................................................................................................................................................................................................................................GTCAGCGCATGTTTGGCACCCACGGC........................2611.001100000
..................................................................................................................................................................................................................................................................................................................GGTCAGCGCATGTTTGGCACCCACGGCG.......................2811.001100000
......................ATGCGAATTTTCACCGCATCGCGCAATG...................................................................................................................................................................................................................................................................................................................2811.001100000
.................................CACCGCATCGCGCAATGGTC................................................................................................................................................................................................................................................................................................................2011.001010000
.........................CGAATTTTCACCGCATCGCGCAAT....................................................................................................................................................................................................................................................................................................................2411.001100000
............................ATTTTCACCGCATCGCGCA......................................................................................................................................................................................................................................................................................................................1911.001100000
.......AACATGTCGCTAACTATGCGAA........................................................................................................................................................................................................................................................................................................................................2211.001000001
.........................CGAATTTTCACCGCATCGCGC.......................................................................................................................................................................................................................................................................................................................2111.001100000
....................................................................................................................................................................................................................................................................................................................TCAGCGCATGTTTGGCACCCACGGC........................2511.001100000
.............................TTTTCACCGCATCGCGCA......................................................................................................................................................................................................................................................................................................................1811.001100000
......................................................................................................................................................................................................................................................................GTGATTTAACGC---TG--GATTGG---------TT...........................................................2211.001000010
..................AACTATGCGAATTTTCACCGCATCGCGCA......................................................................................................................................................................................................................................................................................................................2911.001100000
................................................................................................................................................................................................................................................................................................................................TGGCACCCACGGCGCCAGGAT................2111.001100000
..................................ACCGCATCGCGCAATGGTT................................................................................................................................................................................................................................................................................................................1911.001000001
..............CGCTAACTATGCGAATTTTCACCGC..............................................................................................................................................................................................................................................................................................................................2511.001010000
...........................AATTTTCACCGCATCGCGCAATGGT.................................................................................................................................................................................................................................................................................................................2511.001100000
............................................................................................................................................................................................................................................................................TAACGC---TG--GATTGG---------TTCCTCCTCAGGTC...............................................2811.001010000
..................................................................................................................................................................................................................................................................................................................GGTCAGCGCATGTTTGGCA................................1911.001100000
............................................................................................................................................................................................................................................................................................................................TGTTTGGCACCCACGGCGCCAGGAT................2511.001100000
......................ATGCGAATTTTCACCGCATCGCGCA......................................................................................................................................................................................................................................................................................................................2511.001100000
..................................................................................................................................................................................................................................................................................................................GGTCAGCGCATGTTTGGCACC..............................2111.001000001
...........................AATTTTCACCGCATCGCGCAATGGTC................................................................................................................................................................................................................................................................................................................2611.001010000
.........CATGTCGCTAACTATGCGAATTTTCACCG...............................................................................................................................................................................................................................................................................................................................2911.001100000
.................................................................................................................................................................................................................................................................................................................................................GGATGCTGGCTGCTCAAA..1811.001100000
..............................................................................................................................................................................................................................................................................................................................TTTGGCACCCACGGCGCCAGGATGCT.............2611.001100000
......AAACATGTCGCTAACTATGC...........................................................................................................................................................................................................................................................................................................................................2011.001010000
.................TAACTATGCGAATTTTCACC................................................................................................................................................................................................................................................................................................................................2011.001010000
..................................................GTTAGTGGCGAATGGAAA---------GCTTAAATC...............................................................................................................................................................................................................................................................................2711.001000010
.........................................................................................................................GCTGGAA-AACCGTGAAAACTGGC....................................................................................................................................................................................................................2311.001001000
droBip1
-GCCGCAAACATGTCGCTAACTATGCGAATTTTCACCGCATCGCGCAATGGTTAGTGGCGAATGGAAA---------GCTTTTATCTTACTCA-------------C----TTTCAAG--CGCCGAAA-AACCGTAAAATCTGGGGAA------AAATAGC--GCCGAGTGAGGTTATATAAGCTTATGTCATAGCAA-AACAAAG-----GACAAAAT-TGAATAAATAATTGATT----------------T-T-AACCAGTGATTTAACTA---TG--GATTGG---------TTCCTCCGCAGGTCAGCGCATGTTTGGCACCCATGGCGCCAGGTTGCTGGCCGCCCAAAAGSizeHit CountTotal NormTotal
No Reads
droKik1
-GCCGCAAACATGTCGCTAACTATGCGAATTTTCAACGCATCGCGCAATGGTTAGTGAGTTTCCTAAAGGTTT----CCCCCCGCTCTCA-----------------------GCGCGATTCGTGGAA-CCGTT-CAAAATTCCGTAG------AAATCGC--GTCGAGTGAGGTTATGTAAGCTTATGTCATAGCAA-AACAAAG-----GACCAAAT-CGG-TCATATAAAGCTT----CCCGGC-GATGT-ATAAAGGCGCGATTTAATGG---CA--AAATGA---------CTCGCCCGCAGGTCAGCGCATGTTTGGCAGCCAAGGGGCCCGGCTGATGGCCGCA---CGGSizeHit CountTotal NormTotal
No Reads
droFic1
--CCGCAAACATGTCGCTTACTATGCGAATTTTCACCGCATCGCGCAATGGTAGGTGCTCAGCTT--C---------CCCATTACCTC-------------------------TTGAC--TCCCGGAA-AATCC-GAATTTTCCGTAG------AAACTGC--TCCAAATGAGGTTATGTAAGCTTATGTCATAGCAA-AACAAAG-----GACTAAAT-TGGCTTATTTACAAAATACCCTTAAATA-----T-T-TAAATGTGATTTAATGG---CA--AAATGT---------TTTCCCCACAGGTCAGCGCATGTTTGGCAGCCAGGGAGCCTGTCTTTTTGCCGCCAAACGCSizeHit CountTotal NormTotal
No Reads
droEle1
GGCCGCAAACATGTCGCTTACTATGCGAATTTTCACCGCATCGCGCACTGGTAGGTGTCTAACAA--G---------CGTCTTAGCTC-------------------------TAGCC--CTCCGAAA-ATTCC-AAAATTTCCCTTG------AAATACC--GTCGAGTGAGGTTATGTAAGCTTATGTCATAGCAA-AACAAAG-----GCCAAAAT-GGACTAATTTGAGGATTCTTATTGCAAA-----T-A-AGACTGTGATTTAATGG---TA--TAATGT---------GTCCCCCATAGGTCAGCGCATGTTTGGCAGCCAGGGAGCCCGCCTGCTGGCCGCCCAGCGASizeHit CountTotal NormTotal
No Reads
droRho1
GGCCACAAACATGTCGCTAACTATGCGAATTTTCACCGCATCGCGCACTGGTAGGTGTCTAACAA--T---------CCTCCCACCTC-------------------------TTGAT--AGCCGGTA-AACCC-AAAATTTCAGTGA------AATTTGC--ATCGAGTGAGGTTATGTAAGCTTATGTCATAGCAA-AACAAAG-----GACTAAAT-GGGATAATTTGATGATCCTTATTGCAAA-----A-A-AGAATGTAAATTAATGG---TA--TAATGT---------GTCTCCCATAGGTCAGCGCATGTTTGGCAGCCATGGAGCCCGCCTGTTGGCCGCCCAGCGASizeHit CountTotal NormTotal
No Reads
droBia1
GGCCGCAAACATGTCGCTAACAATGCGAATTTTCACCGCATCGCGCAATGGTAGGTGGCCAAGCA-AT---------ACCCCCACCTCTTTCC-------------C----TCTCGAT--TTCCGGAAAACCCGTGAAAAATCCATGA------AAATCGC--ATTGAGTGAGGTTATGTAAGCTTATGTCATAGCAA-AACAAAG-----GACTAAAT-TGGCTTATTCGAGGATGGTTTTTGGTTT-----A-G-ACTCTGTAAATCAATGG---AT--AAATGT---------TTTCCCCGCAGGTCAGCGCATGTTTGGCAGCCAGGGAGCCCGTCTGCTGGCCGCCCAGCGASizeHit CountTotal NormTotal
No Reads
droTak1
GGCCGCAAACATGTCGCTAACAATGCGAATTTTCACCGCATCGCGCAATGGTAGGTGGCCCAGCA-AA---------CCCCACATCTCCTTCC-------------C----TCTAGAT--CAGCTGAAAATCCGTGAAAAATGCATAA------AAATTGC--GCCCAGTGAGGTTATGTAAGCTTATGTCATAGCAA-AACAAAG-----GACTAAAT-GGGCTTATTTGAGGATTATATTTGCTTA-----A-G-AGGCTGTAAATTAAAAG---TT--TATTAC---------CTCCCCCACAGGTCAGCGCATGTTTGGCAGCCAGGGCGCCCGTCTGCTGGCCGCCCAGCGCSizeHit CountTotal NormTotal
No Reads
droEug1
GGCCGCAAACATGTCGCTAACAATGCGAATTTTCACCGCGTCGCGCAATGGTAGGTGGCAAACAA--T---------ACCCTCACCTC-------------------------GCGAT--ACGCGAAA-AACTT-AAACTTTCCCAGG------AAATCTTTGTCTCTGTGAGGTTATGTAAGCTTATGTCATAGCAA-AACAAAG-----GACTAAAT-GAGCTCAATTCAGGATTCTTATTGCTTA-----G-A-CCGTTGCAATTTAATTT---AA--AAATGA---------ATTTCCCACAGGTCAGCGCATGTTTGGGAGCCAAGGAGCCCGTCTGCTGGC---CCAGCGASizeHit CountTotal NormTotal
No Reads
dm3
-GTCGCAAAAATGTCGCTAACTATGCGAATTTTCACCGCATCGCGCAACGGTAGGTGGCGACCCA--T---------CCCCTCACATCCG-----------------------TTGTT--TTCCGGGA-AATTT-CCCATTTTCGTGG------AAATCGC--GGCGAGTGAGGTTATGTAAGCTTATGTCATACCAA-AACAAAA-----GTCTAAAC-TCGCTTAATTCAGTATAACTTTTCGACT-----T-A-AGCATGTTATTTAATGG---TA--AAATGT---------TCTCCCCACAGGACAGCGCCTGTTTGGCAGCCATGGAGCCCGGCTGCTGGCCGCCCAGCGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................................................................................................................................................................................................................................................................................................................TGTTTGGCAGCCATGGAGCCCGGC.................24110.00100000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000402100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000
........................................................................................................................................................................................................................................................................................................................................ATGGAGCCCGGCTGCTGGCCGCCC.....2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................TTTGGCAGCCATGGAGCCCGGCTG...............2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................CAGCGCCTGTTTGGCAGCCATGGAGC......................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000001000
.....................TATGCGAATTTTCACCGCATCGCGCA......................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....CAAAAATGTCGCTAACTATGCGAAT.......................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................AGCGCCTGTTTGGCAGCCA............................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................GCGCCTGTTTGGCAGCCA............................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TGTTTGGCAGCCATGGAGCCCGGCTGC..............2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................................................................................................................................................................................................................CCTGTTTGGCAGCCATGGAGCC.....................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.........AATGTCGCTAACTATGCGAAT.......................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................GCGCCTGTTTGGCAGCCATGGA........................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................TTGGCAGCCATGGAGCCCGGCTGCTGG...........2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TCGCTAACTATGCGAATTTTCACCGCA.............................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CGCAAAAATGTCGCTAACTAT.............................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................ATGCGAATTTTCACCGCATCGCGCA......................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TCGCTAACTATGCGAATTTTCACCGC..............................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................GCAACGGTAGGTGGCGACCCA--..................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.....................TATGCGAATTTTCACCGCATC...........................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................CACCGCATCGCGCAACGG..................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
......AAAAATGTCGCTAACTATGC...........................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................TGCGAATTTTCACCGCATCGCGC.......................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................CATGGAGCCCGGCTGCTGGCCGCC......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................CAGCGCCTGTTTGGCAGC..............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TATGCGAATTTTCACCGCATCGC.........................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
..........................GAATTTTCACCGCATCGC.........................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GTCGCTAACTATGCGAAT.......................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................TTTGGCAGCCATGGAGCCCGGCTGC..............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......AAAATGTCGCTAACTATGCGAATTTT....................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GTCGCAAAAATGTCGCTAACTATGC...........................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................AGCGCCTGTTTGGCAGCC.............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GCAAAAATGTCGCTAACTA..............................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AACTATGCGAATTTTCACCGC..............................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................AACTATGCGAATTTTCAC.................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................ATTTTCACCGCATCGCGCAACGGA.................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................CGCCTGTTTGGCAGCCATGGAGCCCGGC.................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
............GTCGCTAACTATGCGAATTTTCAC.................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AATGTCGCTAACTATGCGAATTTTCAC.................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................ACGGTAGGTGGCGACCCA--T---------CC......................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............TCGCTAACTATGCGAATTTTCA..................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................GAATTTTCACCGCATCGCGCAACG...................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TGTCGCTAACTATGCGAATT......................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....CAAAAATGTCGCTAACTATGCGAATT......................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................TTTGGCAGCCATGGAGCCCGGC.................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.........AATGTCGCTAACTATGCGAATTTTCACC................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................GGCAGCCATGGAGCCCGGCT................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................GCGCCTGTTTGGCAGCCATGGAGCCC....................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................ATTTTCACCGCATCGCGCAACG...................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AACTATGCGAATTTTCACC................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
....................................................................................................................................................................................................AA-AACAAAA-----GTCTAAAC-T........................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TAACTATGCGAATTTTCACCGCATCGCGC.......................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AACTATGCGAATTTTCACCGCATCGCGC.......................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................AGCGCCTGTTTGGCAGCCAT...........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................TTTGGCAGCCATGGAGCCCG...................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..................AACTATGCGAATTTTCACCG...............................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................GAATTTTCACCGCATCGCG........................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................ATTTAATGG---TA--AAATGT---------TCTCCCCACAG..................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................GCCCGGCTGCTGGCCGCCCA....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................CGCCTGTTTGGCAGCCATG..........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CGCTAACTATGCGAATTTTCA..................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TGTTTGGCAGCCATGGAGCCC....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......AAAATGTCGCTAACTATGC...........................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TGTTTGGCAGCCATGGAGC......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
....................................................................................................................................................................................................................TCTAAAC-TCGCTTAATTCAGTA..........................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TGGAGCCCGGCTGCTGGCCGCC......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................CGCCTGTTTGGCAGCCATGGAGCCCG...................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................................................................TTAATGG---TA--AAATGT---------TCTCCCCACAG..................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................GCAGCCATGGAGCCCGGCT................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TGTTTGGCAGCCATGGAGCCCGG..................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................CACCGCATCGCGCAACGGACA...............................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................CCGCATCGCGCAACGGAC................................................................................................................................................................................................................................................................................................................1840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................ACCGCATCGCGCAACGGACA...............................................................................................................................................................................................................................................................................................................2070.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................AC-TCGCTTAATTCAGTCCG........................................................................................................................19140.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
droSim2
-GTCGCAAACATGTCGCTAACTATGCGAATTTTCACCGCATCGCGCAACGGTAGGTTGCGACCCA--T---------CCCCTCACATCCG-----------------------TTGTT--TTCCGGGA-AATTT-CGCATTTTCGTGG------AAATCGC--GGCGAGTGAGGTTATGTAAGCTTATGTCATACCAA-AACAAAA-----GTCTAAAC-TCGCTTATTTGTGTATAACTATTCGACT-----TATAACGTGCTTATTTAATGG---TA--AAATGT---------TCTCCCCACAGGACAGCGCCTGTTTGGCACGCATGGAGCCCGTCTGCTGGCCGCCCAGCGTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................................................................................................................................................................................................................................................TGTTTGGCACGCATGGAGCCCGTCTGC..............2712.00200000000002000000
...................................................................................................................................................................................................................................................................................................................................CACGCATGGAGCCCGTCTGCTG............2211.00100100000000000000
...................ACTATGCGAATTTTCACCGCATCGCGC.......................................................................................................................................................................................................................................................................................................................2711.00100000000001000000
..................................................................................................................................................................................................................................................................................................................GGACAGCGCCTGTTTGGCACGCATGGA........................2711.00100100000000000000
................................................................................................................................................................................................................................................................AACGTGCTTATTTAATGG---................................................................................1811.00100000100000000000
.....CAAACATGTCGCTAACTATGC...........................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
..................................ACCGCATCGCGCAACGGTAGGTTGC..........................................................................................................................................................................................................................................................................................................2511.00110000000000000000
droSec2
-GTCGCAAACATGTCGCTAACTATGCGAATTTTCACCGCATCGCGCAACGGTAGGTTGCGACCCA--T---------CCCCTCACATCCG-----------------------TTGTT--TTCCGGGA-AATTT-CGCATTTTCGTGG------AAATCGC--GGCGAGTGAGGTTATGTAAGCTTATGTCATACCAA-AACAAAA-----GTCTAAAC-TCGCTTATTTGTGTATAACTATTCGACT-----T-A-AGTACGTTATTTAATTG---TA--AAATGT---------TCTCCCAACAGGACAGCGCCTGTTTGGCAGCCATGGCGCCCGTCTGCTGGCCGCCCAGCGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................ACCGCATCGCGCAACGGTAGGTTG...........................................................................................................................................................................................................................................................................................................2411.0011000
..............................................................................................................................................................................................CATACCAA-AACAAAA-----GTCTA.............................................................................................................................................2011.0011000
.......................................................................................................................................................................................................................................................................................................................................CATGGCGCCCGTCTGCTGGCCGCCC.....2511.0010010
............................ATTTTCACCGCATCGCGCAACGGAC................................................................................................................................................................................................................................................................................................................2511.0010010
.............................................................................................................................................................................................................................................................................................GT---------TCTCCCAACAGGACAGCGCC.........................................2211.0010001
........................................................................................................................................................................................................................................................................................................................CGCCTGTTTGGCAGCCATGGCGC......................2311.0010001
.............................TTTTCACCGCATCGCGCAACGGACA...............................................................................................................................................................................................................................................................................................................2511.0011000
.......................................................................................................................................................................................................................................................................................................................................CATGGCGCCCGTCTGCTGGC..........2011.0010010
......................................CATCGCGCAACGGTAGCG.............................................................................................................................................................................................................................................................................................................18100.2020002
droYak3
-GTCGCAAACATGTCGCTATCTATGCGAATCTTCACCGCATCGCGCAACGGTAGGTGGAGACACA--A---------CACCTCACATCCA-----------------------TCGTT--TTCCGGAA-TATCT-AAAATTTCCGTGA------AAATCAC--GCCGAGTGAGGTTATGTAAGCTTATGTCATACCAA-AACAAAA-----GACTAAAT-TCGCTTATTTGAGGATTACTTTCCGATT-----G-A-AGAATGTAACTTAATGG---TA--AAATGT---------GCTCCCTACAGGACAGCGCATGTTTGGCAGCCATGGAGCCCGTCTGCTGGCCGCCCAGCGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................ATCTATGCGAATCTTCACCGC..............................................................................................................................................................................................................................................................................................................................2115.00502120000000
..................ATCTATGCGAATCTTCACCGCATCG..........................................................................................................................................................................................................................................................................................................................2511.00101000000000
...................................................................................................................................................................................................................................................................................................................GACAGCGCATGTTTGGCAGCC.............................2111.00101000000000
....................CTATGCGAATCTTCACCGCATCG..........................................................................................................................................................................................................................................................................................................................2311.00101000000000
.........................................................................................................................................................................................................................................GATTACTTTCCGATT-----G-A-AGAATGTA............................................................................................2511.00101000000000
....................................................................................................................................................................................................................................................................................................................ACAGCGCATGTTTGGCAGCCA............................2111.00101000000000
...................................................................................................................................................................................................................................................................................................................................CAGCCATGGAGCCCGTCTGCTG............2211.00100001000000
....................CTATGCGAATCTTCACCGC..............................................................................................................................................................................................................................................................................................................................1911.00101000000000
.........CATGTCGCTATCTATGCGAATCTTCACCGC..............................................................................................................................................................................................................................................................................................................................3011.00100000010000
.................................................................................................................................................................................................................................................TCCGATT-----G-A-AGAATGTAACTTAATGG---C...............................................................................2711.00100100000000
............................................................................................................................................................................................................................................................................................................................................AGCCCGTCTGCTGGCCGCCCAGCG.2411.00100010000000
...................................................................................................................................................................................................................................................................................................................GACAGCGCATGTTTGGCAGCCATGGA........................2611.00100000010000
.............................TCTTCACCGCATCGCGCAACGGACA...............................................................................................................................................................................................................................................................................................................2511.00101000000000
.....................................................................................................................................................................................................................................................................................................................................GCCATGGAGCCCGTCTGCTGGCCGCCCA....2811.00101000000000
.......................TGCGAATCTTCACCGCATCGCGCAACG...................................................................................................................................................................................................................................................................................................................2711.00101000000000
...............................................................................................................................................................................................................................................................................................................................................CCGTCTGCTGGCCGCCCAG...1911.00100000000001
droEre2
-GTCGCAAACATGTCGCTATCTATGCGAATCTTCACCGCATCGCGCAACGGTAGGTGGCGACCCA--A---------CCCCTCACATCCT-----------------------TCGTT--TTCCGGGA-AATCTAAAAATTTCCGTGA------AAATCGC--GCCGAGTGAGGTTATGTAAGCTTATGTCATACCAA-AACAATA-----GACTAAAT-TCGCTTATTTGAAGATTAATTTCCGTTT-----T-A-AGAATATAATTTAATAG---TA--AAATGT---------GCTCCCCACAGGTCAGCGCATGTTTGGCAGCCATGGAGCCCGTCTGCTGGCCGCCCAGCGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................ATCTATGCGAATCTTCACCGC..............................................................................................................................................................................................................................................................................................................................2112.0022000000
.................TATCTATGCGAATCTTCACCGC..............................................................................................................................................................................................................................................................................................................................2212.0021000100
......................ATGCGAATCTTCACCGCATCGCGCA......................................................................................................................................................................................................................................................................................................................2512.0022000000
.....................................................................................................................................................................................................................................................................................................................................GCCATGGAGCCCGTCTGCT.............1912.0021000010
.......................TGCGAATCTTCACCGCATCGCGCAACGG..................................................................................................................................................................................................................................................................................................................2812.0022000000
..............................................................................................................................................................................................................................................................................................................................TTTGGCAGCCATGGAGCCCGTC.................2211.0011000000
..........................................................................................................................................................................................................................................................................................................................CATGTTTGGCAGCCATGGA........................1911.0011000000
..................ATCTATGCGAATCTTCACC................................................................................................................................................................................................................................................................................................................................1911.0011000000
...................TCTATGCGAATCTTCACCGCATCGCGCA......................................................................................................................................................................................................................................................................................................................2811.0011000000
..........................GAATCTTCACCGCATCGCG........................................................................................................................................................................................................................................................................................................................1911.0011000000
..........................GAATCTTCACCGCATCGCGCAACG...................................................................................................................................................................................................................................................................................................................2411.0011000000
.....................................................................................................................................................................................................................................................................................................................................GCCATGGAGCCCGTCTGCTGG...........2111.0011000000
........................................................................................................................................................................................................................................................................................................................CGCATGTTTGGCAGCCATGGAGCCC....................2511.0011000000
............................................................................................................................................................................................................................................................................................................................................AGCCCGTCTGCTGGCCGCCC.....2011.0011000000
............................................................................................................................................................................................................................................................................................................................TGTTTGGCAGCCATGGAGCCC....................2111.0011000000
.....................................................................................................................................................................................................................................................................................................................CAGCGCATGTTTGGCAGCCATG..........................2211.0011000000
.....................................................................................................................................................................................................................................................................................................................CAGCGCATGTTTGGCAGCCATGGAGC......................2611.0011000000
........................................................................................................................................................................................................................................................................................................................CGCATGTTTGGCAGCCATGGA........................2111.0011000000
.........................CGAATCTTCACCGCATCGCGCAAC....................................................................................................................................................................................................................................................................................................................2411.0010100000
........ACATGTCGCTATCTATGC...........................................................................................................................................................................................................................................................................................................................................1811.0010010000
..................................ACCGCATCGCGCAACGGTCA...............................................................................................................................................................................................................................................................................................................2011.0011000000
.................TATCTATGCGAATCTTCACC................................................................................................................................................................................................................................................................................................................................2011.0011000000
................................TCACCGCATCGCGCAACGGTC................................................................................................................................................................................................................................................................................................................2111.0011000000
...................TCTATGCGAATCTTCACCGCATCGCG........................................................................................................................................................................................................................................................................................................................2611.0011000000
......................................................................................................................................................................................................................................................................................................................AGCGCATGTTTGGCAGCCATGGA........................2311.0011000000

Generated: 05/19/2015 at 12:43 PM