ID:

dvi_4079

 Coordinate:

scaffold_12855:5700176-5700429 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.7 -12.6 -12.5

Flybase annnotation

CDS [Dvir\GJ10907-cds]; exon [dvir_GLEANR_10800:2]; CDS [Dvir\GJ10907-cds]; exon [dvir_GLEANR_10800:1]; intron [Dvir\GJ10907-in]

Repeatable elements

NameClassFamilyStrand
(CA)nSimple_repeatSimple_repeat+

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GTGCACAAGAAATCAGGCTGTAACACGGGCGTTGATGTATTCTACTACAGGTAACCAAGCGAATTACTTGGCTGAACTTTAAGCAGGTACACGGTGAAGGTGAAACCTGGAAACTAACGTAAATTGTAATATAAACACACACATACACACAGCGAGTGCACGTGCGATAACGAATACGTTTAACTCACTCTCACTACTTTTTTTGTTATTACATTTACTACACACACAAACACGCACACACACACACACCACACATTACCTACCCTCAACCATACCTGCCCGTTCACCAATTGGATGTGTACAGCCCCACAGGCAAAAGAATTGAAAGCAAGCCGCAATTAGCACGCCAATTAA
**************************************************************************........(((.((.((((((..((((...))))....)))..(((....((((...............))))....))).))).)).))).......************************************************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060685
9xArg_0-2h_embryos_total
 SRR060671
9x160_males_carcasses_total
 V116
male body		 SRR060654
160x9_ovaries_total
 SRR060676
9xArg_ovaries_total
 SRR060680
 9xArg_testes_total
 SRR060687
9_0-2h_embryos_total
 M061
embryo
 SRR060668
160x9_males_carcasses_total
 SRR060674
9x140_ovaries_total
 SRR060678
9x140_testes_total
 SRR060683
160_testes_total
 SRR060688
160_ovaries_total
 SRR1106723
embryo_12-14h
 SRR060679
140x9_testes_total
 SRR060669
160x9_females_carcasses_total
 SRR060667
160_females_carcasses_total
 SRR060664
9_males_carcasses_total
 V047
embryo
 SRR060684
140x9_0-2h_embryos_total
 SRR060660
Argentina_ovaries_total
 SRR060665
9_females_carcasses_total
..........................................................................AACTTTAAGCAGGTACACGGT................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................GCACGGTGAAGGTGAAACCTG..................................................................................................................................................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................CAATTGGATGTGTACAGCCCC.............................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................CGAGTGCACGTGCGATAACG...................................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................GTGCGATAACGAATACGTTTAAC.......................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........ATCAGGCTGTAACACGGGCGT.................................................................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................TACAGGTAACCAAGCGAATTA................................................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................AACGAATACGTTTGGCTCACT..................................................................................................................................................................... 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................CGGTGAAGGTGAAACCTGG.................................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................AAGCGGGTACACGGTGAAGGT............................................................................................................................................................................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........AGTCAGGCTGTAACACGGGCGTTA................................................................................................................................................................................................................................................................................................................................ 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................GCTGTAACACGGGCGTTGATG............................................................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............TCAGGCTGTAACACGGGCGTT................................................................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................CCAATTGGATGTGTACAGCC................................................ 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................AAAAGAATTGAAAGCAAGCCG................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................ACACACAGCGAGTGCACGTG.............................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............TCGGGCTGTAACACGGGCGTT................................................................................................................................................................................................................................................................................................................................. 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................AGCAAGCCGCAATTAGCACGC....... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................AAAGAATTGAAAGCAAGCCGC.................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................CACGCACACACACACACACCACACA................................................................................................... 25 0 2 1.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............CGGGCTGTAACACGGGCG................................................................................................................................................................................................................................................................................................................................... 18 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................TTGTAATATAAACACACACAT.................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................CAACCATACCTGCCCGTTCAC................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................ACTTGGCTGAACTTTAAGCGG............................................................................................................................................................................................................................................................................ 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................ATTACATTTACTACACACACA.............................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................AAACCTGGAAGCTGACGTAAA....................................................................................................................................................................................................................................... 21 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................GGTACGATAACGAATACGGT.............................................................................................................................................................................. 20 3 8 0.50 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0
...........................................................................................................................................................................................................TGTTATTACATTTACTACA.................................................................................................................................... 19 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................ATTACCCACTCTCAACCA.................................................................................. 18 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................CACGCACACACACACACACCACA..................................................................................................... 23 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................GGTACGATAACGAATACGGTT............................................................................................................................................................................. 21 3 5 0.20 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TCTAATATAAAGACACACATAG................................................................................................................................................................................................................ 22 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..............................................................................................TGAAGGTTAAACCCGGACA................................................................................................................................................................................................................................................. 19 3 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..............................................................................................................................................................................................................................CACACAAACACGCACACACACACACA.......................................................................................................... 26 0 13 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................CAAGCGGCAATAAGCACGCA...... 20 3 15 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................AAAGAATGGAAGGCAAGC..................... 18 2 16 0.06 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................TGGGACAAGGTGAAGGTGAA.......................................................................................................................................................................................................................................................... 20 3 17 0.06 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................CACGCACACACACACACACC........................................................................................................ 20 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................ACACACACAAACACGCACAC................................................................................................................... 20 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
........................................................................................................................................................................................................................................CGCACACACACACACACC........................................................................................................ 18 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................CACAAACACGCACACACACACACA.......................................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................CAAACACGCACACACACACACA.......................................................................................................... 22 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................................................................................................................CACACAAACACGCACACAC................................................................................................................. 19 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..........................................................................................................................................................................................................................TACACACACAAACGCGCACAC................................................................................................................... 21 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.........................................................................................................................................................................................................................................................................................GTTGACCACTTGGATGGGT...................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

CACGTGTTCTTTAGTCCGACATTGTGCCCGCAACTACATAAGATGATGTCCATTGGTTCGCTTAATGAACCGACTTGAAATTCGTCCATGTGCCACTTCCACTTTGGACCTTTGATTGCATTTAACATTATATTTGTGTGTGTATGTGTGTCGCTCACGTGCACGCTATTGCTTATGCAAATTGAGTGAGAGTGATGAAAAAAACAATAATGTAAATGATGTGTGTGTTTGTGCGTGTGTGTGTGTGTGGTGTGTAATGGATGGGAGTTGGTATGGACGGGCAAGTGGTTAACCTACACATGTCGGGGTGTCCGTTTTCTTAACTTTCGTTCGGCGTTAATCGTGCGGTTAATT
**************************************************************************************************************************************************************************************........(((.((.((((((..((((...))))....)))..(((....((((...............))))....))).))).)).))).......************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060677
Argx9_ovaries_total
 M027
male body		 SRR060660
Argentina_ovaries_total
 SRR060678
9x140_testes_total
 V116
male body		 SRR060658
140_ovaries_total
 SRR060675
140x9_ovaries_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060659
Argentina_testes_total
 M047
female body
 SRR060654
160x9_ovaries_total
 SRR060665
9_females_carcasses_total
 SRR060676
9xArg_ovaries_total
 SRR060683
160_testes_total
 SRR060685
9xArg_0-2h_embryos_total
 V053
head
 SRR060679
140x9_testes_total
 SRR060657
140_testes_total
 SRR060664
9_males_carcasses_total
 SRR060670
9_testes_total
 SRR060671
9x160_males_carcasses_total
 SRR060672
9x160_females_carcasses_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060687
9_0-2h_embryos_total
 SRR060689
160x9_testes_total
 SRR060661
160x9_0-2h_embryos_total
 V047
embryo
 SRR060681
Argx9_testes_total
 GSM1528803
follicle cells		 SRR060662
9x160_0-2h_embryos_total
 SRR060669
160x9_females_carcasses_total
.....................................ATAAGATGATGTCCATTGGTT........................................................................................................................................................................................................................................................................................................ 21 0 1 2.00 2 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................GTATGTGTGTCGCTCACGTGCA............................................................................................................................................................................................... 22 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................CCCGCAACTACATAAGATGA.................................................................................................................................................................................................................................................................................................................... 20 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TTGATTGCATTTAAAATTATA.............................................................................................................................................................................................................................. 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................GAAATTCGTCCATGTGCCACT................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................GCAAATTGAGTGAGAGTGATGAAAAAA....................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................TGGACGGGCAAGTGGTTAACC............................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................CGTAAGATGATGTCCATTGGTT........................................................................................................................................................................................................................................................................................................ 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................GTCGGGGTGTCCGTTTTCTT................................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................ACATTGTGCCCGCAACTACGTGA......................................................................................................................................................................................................................................................................................................................... 23 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................TGCACGCTGTTGCTTGTGCAA.............................................................................................................................................................................. 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................CGTCCATGTGCCACTTCCACT........................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................GTCCGTTTTCTTAACTTTCGT........................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................TGTGGTGTGTAATGGATGGGA........................................................................................ 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................GTGCCCGCGACTACATAAGGT...................................................................................................................................................................................................................................................................................................................... 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................................................GGCGTTAATCGTGCGGTTAAT. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................ACATGTCGGGGTGTCCGTTTT.................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................AATGTGTGTCGCTCACGTGC................................................................................................................................................................................................ 20 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................TGCCCGCAACTACATAAGATG..................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................GTAATGGATGGGAGTTGGTAT................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................GTTCGGCGTTAGTCGTGCGGT..... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................TATGGGCGGGCAAGTGGTTAA.............................................................. 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................................TTCTTAACTTTCGTTCGGCGT................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................GCTATTGCTTGTGCAAGTTGAGT....................................................................................................................................................................... 23 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GGGCAAGTGGTTAACCTACAC....................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................AGAGAGTGATGAAAAAGACAAT.................................................................................................................................................. 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................CGGCGTTAATCGTGCGGTTGG.. 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................TAAATTCGTCCATGTGCCACTT................................................................................................................................................................................................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....GTTCTTTAGTCCGACACTAT......................................................................................................................................................................................................................................................................................................................................... 20 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TGTGTCGCTCACGTGCACGCT........................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................................GCGTTAGTCGTGCGGTTAA.. 19 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................CGGCGTTAATCGTGAGGTTAA.. 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...........................................TGATGTCCATTGGTTCGCTTA.................................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................GTTGGTATGGACGGGCAAGTG................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................TCGTTCGGCGTTAATCGTGC........ 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................................GCGTTAGTCGTGCGGTTA... 18 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................GTGAGAGTGATGAAAAAAACA.................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................AGTGCCCGCAACTCCATA.......................................................................................................................................................................................................................................................................................................................... 18 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................GTCCATGTGCCACTTCCACTT.......................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................ATTGAGTGAGAGTGATGAAAA......................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................CGGCGTTAGTCGTGCGGTTAA.. 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................CCTGCACGTGTCGGGGTGTC.......................................... 20 2 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................CGCTTAATGAACCGACTTGAA................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................AGTGAGAGTGATGAAAAAACA..................................................................................................................................................... 21 2 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................TGTGTATGTGTGTCGCTCGCGT.................................................................................................................................................................................................. 22 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................................................TGTGTGTATGTGTGTCGCT....................................................................................................................................................................................................... 19 0 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................GTGCCCGCGACTACGTAAGGT...................................................................................................................................................................................................................................................................................................................... 21 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................GGGGGAGTTGGTATGGATGGG......................................................................... 21 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.....GTTCTTGAGTCCGACA............................................................................................................................................................................................................................................................................................................................................. 16 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................GTCTGTCTTCTAAACTTTCGT........................ 21 3 10 0.20 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....GTTCTTGAGTCCGACAGTGC......................................................................................................................................................................................................................................................................................................................................... 20 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................TGATGTCCGTTGGTTCGT..................................................................................................................................................................................................................................................................................................... 18 2 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........TAGTCAGACATAATGCCCG.................................................................................................................................................................................................................................................................................................................................... 19 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................................AAAAAAAAAATAATTTAGATGATG..................................................................................................................................... 24 3 14 0.14 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................AAACCAATCATGTAGATGAT...................................................................................................................................... 20 3 8 0.13 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................ATTTGTGTGTGTATGTGTG............................................................................................................................................................................................................ 19 0 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.....................................................................................................................................................................................................................................................................TGGGAGTTGGTATGT.............................................................................. 15 1 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
................................................................................................................................................................................................................................................................ATGTCTGGGAGTTGGTAT................................................................................ 18 2 15 0.07 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................AGGGAAGGGAAAGTGGTTAA.............................................................. 20 3 16 0.06 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................AAAAAGAATAATGTAATTG........................................................................................................................................ 19 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.....................................................................................................................................................................................................................................................TGTGGTGTGTAATGAAAGT.......................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
................................................................................................................CGATTGCATCTAACTTTAT............................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
................................................................................................................................................................................................................................................................AAAGATGGGAGTTGGTAT................................................................................ 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12855:5700126-5700479 + dvi_4079 GTGCACAAGAAATCAGGCTGTAACACG------GG---------------------------------------------------------------------------CGTTGATGTATTCTACTACAGGTAA-CCAAGCGAAT-------TACTTGGCTGAACTTT-------------------AAGC------AGGTAC--AC----GGTGAAGGTGAAACCTGG-AAACTAACGTAAATTGTAATATAAACACACAC--A-TACACAC-----------------AG-CGAGTGCACG-TGCGATA-----------A--CGA-A--TACGTTTA-ACTCACTCTCACTACT---TTTTTTGTTATTACATTTACT-A------------------------------------------------------------CACACACAAACACGC------ACA------CACACACA------CA-----------------------CCACACATT----ACCTACCC-----TC--------------AAC-----CATA-----CCTGCCCGTTC-ACCAATTGGATGTG--T--------ACAGCCCCACAGGCAAAAGAATTGAAAGCAAGCCGCAATTAGCACGCCAATTAA
droMoj3 scaffold_6540:6023153-6023543 + GTGCATAAGAAATCTGGTTGCAACACG------GG---------------------------------------------------------------------------CGTTGATGTGTTCTACTACAGGTAA-CCAAGCACAT-------TACTTGGC----------TGCT-ATTTAG--------GC------AGGTAC--AC----GGTGAAGGTGGAGCCTGG-CAACTAACGTAAATTGTAATATAAACACAAAA--A-C--------------------ATAAAGTGACTGCACG-TGCGATA-----------A--CGA-A--TACGTTTA-ACTCACTCTCACTACTCTCTTTTTTGTTATTACATTTGCC-ACACACCA--------------------------------------ACACACTCCCACACACACACTTGCACATAAAAACATATACACATACGCAC--A------------CA-----------------CGAAAT-------TTC----CCACCCTC--------------ATACTTTGCGTTCCTGAACCGTTCATCT-A----TTGGATG----TG---C---ACAGCCCGACAGGCAAACGAATTGAGAGTAAACCGCAATTAGCACGTCAATTGA
droGri2 scaffold_14906:8304047-8304451 - GTACACAGAAAATCGAGCTGCAATTCG------GG---------------------------------------------------------------------------CGTTGATGTTTTCTACTACAGGTAA-CCAAGCAA-GTA--AATTACTCGGCTGATCATT-------------------AAGCAAGCGCAGGTACACAC----GGTGAAGGTGAAACCTGGCAAACTAACGTTAACTGTAATTTACACACAAAC--A-CACACACAGAA------ACACATCTG-CGACTGCACG-TGCGATA-----------A--CGA-AT--ACGTTGT-ACTCACTCTCACTATT---TTTTGTTTTATGACATTTACC-A----------------------------------------------------------CACACAAACACACACACCCACACATA------CGCACACGCACAAACACCCACCCCCA-------------CCAAC-----CAAA---AATCCAACAAA---AAACTATC-----------------------CCCCACCCAACC-AATTTGGATG--TGT-AC---GCAGCCCGACAGGCAAAAGAATTGAAAGCAAACCGCAATTAGCACGCCAATTGA
droWil2 scf2_1100000004902:4667400-4667778 + GTACGGA---AATCGGCGAATA---------------------------------------------GCAG---CAGCGC------AC---CCAATAATAATAACAACAAAGTGGATGTCTTTTACTACAGGTAA-GGACACCGACCA-------------------GGACTGCA------GC---TTA------------------------------------------------AT-----------------------G--------------------ATAAAAACCGA-TCATGCACGTTATTTCCTGTAAAGGATATTGCAG-AGATACTTTTA--ATCACTTTCACT-------TTTCTGTTAC---ACACACACACAC---------------A-TATACAATA-CGCGGCACTCACA---CAAA--------CCCACAACTTTGTACATATATGTATA------CATACAA-------CACC--CC--CG----ACTCCGTCACC-ATTACC----ACCT---CCACCTCA---CGAT--------TGCC------------AC----CGTCC-ACA-AATATGTTGCTGTTT-AA---ACAGTCCCACAGGCAAGCGAATTGAAAGCAAACCGCAATTAGCCCGTCAATTGG
dp5 2:24003487-24003862 + GGGCGAA---AGTCGGGCAGCAGC------AGTTGCGCCACTACCACCAACA---------------GCAG---CAGCAT------CAGCAGCAACAACAAC---AATAAAGTGGATGTTTTTTACTACAGGTAAAAGAAGCTGAGCC-------------------CCATCTCC-AGACAG-------------------------------------------------------------------------------GC--G-GACACATAGATC---CC----------TCCCTGCACGTTGTAA-A---------TCT--CGGAATATACGTTTA--ATCACTCTCACTACT----TTTCTGTTATTACATCCGCATACACACC---CACA-CCACACCACACCAAA----------CAC-----ACA--------CACGCACACGCACACGCCTATGCATA------CACACAAA------CACACACA-----------------TGATCAACC--------A-------------------TCCCCCCACC------------AA----CACCC-ACA-ACTGTGTCCG--TCCTCAAAAACAGTCCAACAGGAAAAAGAATTGAAGGAAAGCAGCAG---------------G
droPer2 scaffold_3:6782036-6782411 + GGGCGAA---AGTCGGGCAGCAGC------AGTTGCGCCACTACCACCAACA---------------GCAG---CAGCAT------CAGCAGCAACAACAAC---AATAAAGTGGATGTTTTTTACTACAGGTAAAAGAAGCTGAGCC-------------------CCATCTCC-AGACAG-------------------------------------------------------------------------------GC--G-GACACATAGATC---CT----------TCCCTGCACGTTGTAA-A---------TCT--CGGAATATACGTTTA--ATCACTCTCACTACT----TTTCTGTTATTACATCCGCATACACACC---CACA-CCACACCACACCAAA----------CAC-----ACA--------CACGCACACGCACACGCCTATGCATA------CACACAAA------CACACACA-----------------TGATCAACC--------A-------------------TCCCCCCACC------------AA----CACCC-ACA-ACTGTGTCCG--TCCTCAAAAACAGTCCAACAGGAAAAAGAGTTGAAGGAAAGCAGCAG---------------G
droAna3 scaffold_13340:15401508-15401862 + GGTCGCA---AGTCGGCTAGCAGCGCCAACAGCAACGCCAGCATCACAACCAAT------------AGTAG---------------------CAGCAACAACAACAACAAGGTGGATGTTTTCTACTACAGGTAA-AGAGGATGCGGG-------------------ATA-------------------AGCAGGC------GA--ACTCCCAGACA-------ATCTGG-GGTCTGAC------CCCA-------------------ATGTA-----------------CAGATCACTGCACGCCATGGAA-----------T--CGG-ATATACGATTA--ATCACTTTCACTGCC----TTTCTGTTATTACATTCACATAAATACCACACA-A----CA-TAAA---------------------------------------------------CTATGTATA------CACACACA------CATAC----ACTTGCA-------CACGGTCCACT----A-CTA-------------------------------------------TTCTTTTCC-ATC-GCCGTGTCTA--TTC--CGCCACAGTCCCACAGGCAAGAGGGTCGAGAGCAAGC---------------------
droBip1 scf7180000396708:4628935-4629288 - GTCCGCA---AGTCGGCCAACAGCGCTAATAATAACGCCAGCATCACAAGCAAC------------AGCAG---------------------CAGCAACAACAACAACAAGGTGGATGTTTTCTACTACAGGTAA-AGAGGATGCGGG-------------------ATA-------------------AGGAGGC------GA--ATTCCCAGACT-------TTCTGG-GGTCTGAC------CCCA-------------------ATGTA-----------------TAGATCACTGCACGCCATGGAA-----------T--CGG-ACATACGATTA--ATCACTTTCACTGCC----TTTCTGTTATTACATTCACATAACTGCCACACA-A----CA-TAAA---------------------------------------------------CTATGTATA------CACACACA------CACAT--ACACTTGCA-------CACGGTCCACT--------A-------------------------------------------TTCTTTTCC-ATC-GCCGTGTCTT--TTC--CGCCACAGTCCCACAGGCAAGAGGGCCGAGAGCAAGC---------------------
droKik1 scf7180000302387:434609-435008 + GTCCGCA---AGTCCGGCAGCAGCTCCAATAGCAACGCCAGCGCTACCAACACC------------A------------CCACCGCCAG------CAACAACAATAACAAGGTGGATGTTTTCTACTACAGGTAA-AGACGCTGAGGA----------------GCAGCA-------------------AGCAGG-------------------------------CTGG-GGACTGGG----------------------GGATGGGATGCA---------CCCAATCACGGAACACTGCACGCCGTCCAA-----------T--CGG-ATATATGTTTA--CTCACTTTCACTACC----TTTTTGTTATTACATCCGCATAAACACCACACA-A----CAACACACCACTCGA---------CCCCACAT-------------CACACGCAC------ATGTATA------CACACACA--CACACACCCACA-----------------CGGTCC-------ACCTAACCCACC------------------------------------------TCC-ACC-GCCGTGTTCA--TGTTCCGCCACAGTCCCACAGGAAAACGGGTCGAGAGCAAGCCGCAGTTGGCGCGCCAATTGG
droFic1 scf7180000454104:1461754-1462121 - GTCCGCA---AATCAGGCAGCAGCGCTAATAGCAACGCCAGCAGCAACAACAAC------------AGCAG------T---------AGCAACAACAACAACAATAACAAGGTGGATGTTTTCTACTACAGGTAA-AGAAGAAGAATG-------------------GTACTACAAATATAGA---CTA------------------------------------------------AG----------------------AA--G-GATATA---------CTCCGTATCGGAACACTGCACGCTGTTGAA-----------T--CGG-ATATACGTTTA--ATCACTTTCACTACC----TTTCTGTTATTACATCCAAATCAACACCA----------------------------------------------------ACACACACGCACACGCCTATGTATA------CACACACA------CACACACACACT-------------CGAAC-----CC-AAATAACCCACCCAA---AA--------------------------AATCTCCACC----C-GCCGTGTCCG--TTC--A---GCAGTCCTACAGGAAAAAGGGTCGAGGGAAAGCCGCAG----------------
droEle1 scf7180000491047:262488-262862 - GTCCGAA---AATCGGGCAGCAGCTCCAATAGCAACGCCAGCAGCAACAACAAC------------AGCAGCACCACCACCACCGCCAGCAGCAACAACAACAATAACAAGGTGGATGTTTTCTACTACAGGTAA-AGAAGAAGAGTG-------------------GTAGTAC--ATATAGA---CTA------------------------------------------------AG-----------------------G--G-GATATA---------CTAAATATTGGAACACTGCACGCTGTTGAA-----------T--CGG-ATATACGTTTA--ATCACTTTCACTACC----TTTCTGTTATTACATCCACATATACACCA--------------------------------------ACATA--------CACACACACGCACACGCCAACGCATA------CACACACA------------CA-----------------CGATCC-------ACCTAACCCACCCAA--------------------------------ATCTCCACCC-ACC-GCCGTGTCCG--TTC--A---ACAGTCCCACAGGAAAAAGGGCCGAGGGAAAGCCGCAG----------------
droRho1 scf7180000777865:154699-155068 + GTCCGAA---AATCGGGCAACAGCTCCAATAGCAACGCCAACAGCAACAACAAC------------AGCAG------CACCACCGCCAGCAGCAACAACAACAATAACAAGGTGGATGTTTTCTACTACAGGTAA-AGAAGAAGAGTG-------------------GTACTAC--ATATAGA---CTA------------------------------------------------AG----------------------AG--G-GATATA---------CTAAATATCGGAACACTGCACGCTGTTGAA-----------T--CGG-ATATACGTTTA--ATCACTTTCACTACC----TTTCTGTTATTACATCCACATCTACACCA--------------------------------------ACATA--------CACACACACGCACACGCCTATGCATA------CACACACA------------CA-----------------CGATCC-------ACCTAACCCACCCAA--------------------------------ATCTCCACCC-ACC-GCCGTGTCCG--TTC--A---ACAGTCCCACAGGAAAAAGGGCTGAGGGAAAGCCGCAG----------------
droBia1 scf7180000302075:5396788-5397196 + GTCCGCA---AGTCGGGCAGCAGCTCCAATAGCAACGCCAGCAGCAACAACAACAACACCAGCAGCAGCAG---CAGTGCCACAGCCAGCGGCAACAACAACAATAACAAGGTGGATGTTTTCTACTACAGGTAA-AGAGGAAGAGCGAGGA---------------GCACT-CC-ATATAGA--ACTA------------------------------------------------AGGGAG------------------GG--G-GATATGTA-----TAGCCAATATCGGAACACTGCACGCCGTTCAT-----------T--CGG-ATGTAATTTTA--ATCACTTTCACTACC----TTTCTGTTATTACATCCACATCAAC--CAACCA-A----CA-CACACTACC----------CAC-----ACA--------CACACACACGCACACGCCTATGCATA------CATAC--A------------CA-----------------CGAACC-------ACCTAACCCACCAAA---AA--------------------------AATCTCCACCC-A----CCGCGTCCG--CTC--A---ACAGTCCCACAGGAAAAAGGGCGGAGGGAAAGCCGC------------------
droTak1 scf7180000415397:400901-401298 - GTCCGCA---AGTCCGGCAGCAGCTCCAATAGCAACGCCAGCAGCAACAACAACAAC------AGCAGCAG---CAGCGCCACAGCCAGCAGCAACAACAACAATAACAAGGTGGATGTTTTCTACTACAGGTAA-AGAAGAAGAGGA----------------GC-GCACT-CT-ATATAGA---CTA------------------------------------------------AG----------------------GG--GAGATATA---------TCTAAAATCGGAACACTGCACGCTGTTGCA-----------T--AGG-ATAAACTTTTA--ATCACTTTCACTACC----TTTCTGTTATTACATCCACATCAAC--CAA-C--A----CA-CACACCACT----------CACA---------------AACACACACGCACACGCCTATGTATA------CACAC--A------------CA-----------------CGATCC-------ACCTAACCCACCAAAAAAAA--------------------------AATCTCCACCC-ACC-GCCGAGTGCG--TTC--A---GCAGTCCCACAGGAAAAAGGGCGGAGGGAAGGCCGCAG---------------G
droEug1 scf7180000407136:306645-307008 - GTCCGCA---AATCGGGCAATAGCTCCAATAGCAACGCCAGCAGCAACAACAAC------------AGCAG---CACCACCACAGCCA---GCAACAACAACAATAACAAGGTGGATGTTTTCTACTACAGGTAA-AGAAGAAGAACA----------------------CTACT-ATATAGA---C-A------------------------------------------------AG----------------------GG--G-GATATA---------CCTAATATCGGAATACTGCACGCTGTTGAA-----------T--CGG-ATATACGTTTA--ATCACTTTCACTACC----TTTCTGTTATTACATCCGCATCAACAC----------------ACACC-----------------------A--------CACACACACGCACACGCCTATGTATA------CACAC--A------------CA-----------------CGAACC-------ACCTAACCCACCTAA--------------------------------AACTCCACCC-ACC-GCCGCGTCCG--TTC--A---ACAGTCCCACAGGAAAAAGGGCGGAGGGAAAGCCGCAG----------------
dm3 chr3R:5385644-5386030 + GTCCGAA---AGTCCGGCAGCAGCGCCAATAACAACGCCAGCAGCAACAACAAC------------AGC------AGTGCCACAGCCAGCAGCAACAACAACAATAACAAGGTGGATGTTTTCTACTACAGGTAA-AGAAGAAGAGCA-------------------GAATTACT-ATATAGACTACT--------------------------------------------------------------------------------ATATA---------CCTAAAATCGGAACACTGCACGCTGTTTAA-----------T--CGG-ATAAACGTTTATAATCACTTTCACTACC----TTTCTGTTATTACATCCGCATAACCAC---ACACA----CA-CACACCATA-TA---------CAC--------------CACACACACGCATACGCCTATGTATA------CACACGCA------------CA-----------------CGAACTACC----ACCTAACCCACCAAA-------------------------------AATATCCATCC-ACC-GCCGTGTCTG--TTC--A---GCAGTCCCACAGGAAAAAGGGCGGAGGGAAAGCCACAG----------------
droSim2 3r:15640701-15641095 - dsi_17159 GTCCGAA---AGTCCGGCAGCAGCGCCAATAGTAACGCCAGCAGCAACAACAAC------------AGCAG---CAGTGCCACAGCCAGCAGCAACAACAACAATAACAAGGTGGATGTTTTCTACTACAGGTAA-AGAAGAAGAGCA-------------------GCACTACT-ATATAGAATACT--------------------------------------------------------------------------------ATATA---------CCTAAAATCGGAACACTGCACGCTGTTGAA-----------T--CGG-ATAAACGTTTA--ATCACTTTCACTACC----TTTCTGTTATTACATCCGCATAAACACA---CACACACACA-CACGCCATA-TA---------CAC--------------CACACACACGCACACGCCTATGTATA------CACACGCA------------CA-----------------CGAACTACCACC-ACCTAACCCACCAAA-------------------------------AATATCCATCC-ACC-GCCGTGTCTG--TTC--A---GCAGTCCCACAGGAAAAAGGGCGGAGGGAAAGCCGCAG----------------
droSec2 scaffold_0:16510927-16511317 - GTCCGAA---AGTCCGGCAGCAGCGCCAATAGTAACGCCAGCAGCAACAACAAC------------AGCAG---CAGTGCCACAGCCAGCAGCAACAACAACAATAACAAGGTGGATGTTTTCTACTACAGGTAA-AGAAGAAGAGCA-------------------GCACTACT-ATATAGAATACT--------------------------------------------------------------------------------ATATA---------CCTAAAATCGGAACACTGCACGCTGTTGAA-----------T--CGG-ATAAACGTTTA--ATCACTTTCACTACC----TTTCTGTTATTACATCCGCATAAACACA---CACA----CA-CACGCCATA-TA---------CAC--------------CACACACACGCACACGCCTATGTATA------CACACGCA------------CA-----------------CGAACTACCACC-ACTTAACCCACCAAA-------------------------------AATATCCATCC-ACC-GCCGTGTCTG--TTC--A---GCAGTCCCACAGGAAAAAGGGCGGAGGGAAAGCCGCAG----------------
droYak3 3R:9436878-9437264 + GTCCGAA---AATCCGGCAGCAGCGCCAATAGCAACGCCAGCAGCAACAACAAC------------AGCAG---CAGTGCCACAGCCAGCAGCAACAACAACAATAATAAGGTGGATGTTTTCTACTACAGGTAA-AGAAGAAGAGCA-------------------ACACTACT-ATATAGTGTACT--------------------------------------------------------------------------------ATATA------CTACCTAAAATCGGAACACTGCACGCTGTTGCA-----------T--CGG-ATAAACGTTTA--ATCACTTTCACTACC----TTTCTGTTATTACATCCGCATAAAC--CAAACA-C----CA-TACACCAC-----------------ACAT---------CACACACACGCACACGCCTATGTATA------CACACACA------CA----CA-----------------CGAACT-------ACCTAACCCACCCAA--------------------------------ATCTCCATCC-ACC-GCCGTGTCTG--TTC--A---GCAGTCCCACAGGAAAAAGGGCGGAGGGGAAGCCGCAG----------------
droEre2 scaffold_4770:16214685-16215048 - GTCCGAA---AATCCGGCAGCAGCACCAATAGCAAC------------AACA---------------GCAG---CAGTGCCACAGCAGGCAGCAACAACAACAATAACAAGGTGGATGTTTTCTACTACAGGTAA-AGAAGAAGAGCA-------------------GCACTACT-ATATAGAGTACT--------------------------------------------------------------------------------ATATA------CTACCTAAAATCGGAACACTGCACGCTGTTGAA-----------T--CGG-ATAAACGTTTA--ATCACTTTCACTACC----TTTCTGTTATTACATCCGCATAAAC--CACACA-T----CA-TACAC---------------------------------CACACACACGCACACGCCTATGTATA------CACACACA------CC--CACA-----------------CGAACT-------ACCTAACCCACCCAA--------------------------------ATCTCCATC----C-GCCGTGTCTG--TTC--A---GCAGTCCCACAGGAAAAAGGGCGGAGGGAAAGCCGCAG----------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
GTGCACAAGAAATCAGGCTGTAACACG------GG---------------------------------------------------------------------------CGTTGATGTATTCTACTACAGGTAA-CCAAGCGAAT-------TACTTGGCTGAACTTT-------------------AAGC------AGGTAC--AC----GGTGAAGGTGAAACCTGG-AAACTAACGTAAATTGTAATATAAACACACAC--A-TACACAC-----------------AG-CGAGTGCACG-TGCGATA-----------A--CGA-A--TACGTTTA-ACTCACTCTCACTACT---TTTTTTGTTATTACATTTACT-A------------------------------------------------------------CACACACAAACACGC------ACA------CACACACA------CA-----------------------CCACACATT----ACCTACCC-----TC--------------AAC-----CATA-----CCTGCCCGTTC-ACCAATTGGATGTG--T--------ACAGCCCCACAGGCAAAAGAATTGAAAGCAAGCCGCAATTAGCACGCCAATTAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................................................................................................................................................................AACTTT-------------------AAGC------AGGTAC--AC----GGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000100000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATTGGATGTG--T--------ACAGCCCC..............................................2111.001000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................................................................................................................................CGAGTGCACG-TGCGATA-----------A--CG...............................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000100000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................G-TGCGATA-----------A--CGA-A--TACGTTTA-AC...............................................................................................................................................................................................................................................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
...........ATCAGGCTGTAACACG------GG---------------------------------------------------------------------------CGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000100000000000000000000000000000
..............................................................................................................................TACAGGTAA-CCAAGCGAAT-------TA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000001000000000000000000000000000
...............................................................................................................................................................................................................C----GGTGAAGGTGAAACCTGG-................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000001000000000000000000000000000
................GCTGTAACACG------GG---------------------------------------------------------------------------CGTTGATG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010000000000000000000000000000000000000000000000000000000000
............TCAGGCTGTAACACG------GG---------------------------------------------------------------------------CGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAATTGGATGTG--T--------ACAGCC................................................2011.001000000000000000000000000000000000000001000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGAATTGAAAGCAAGCCG...................2111.001000000000000000000000100000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................ACACAC-----------------AG-CGAGTGCACG-TG....................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAGCCGCAATTAGCACGC.......2111.001000000000000000000100000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAATTGAAAGCAAGCCGC..................2111.001000000000000000000000000000000000001000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGC------ACA------CACACACA------CA-----------------------CCACACA...............................................................................................................................................2521.002002000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................TTGTAATATAAACACACAC--A-T...........................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--------------AAC-----CATA-----CCTGCCCGTTC-AC.............................................................................2111.001000000000000000000000000000000000000010000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................ATTACATTTACT-A------------------------------------------------------------CACACACA...................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000100000000000
..............................................................................................................................................................................................................................................................................................................................................................................TGTTATTACATTTACT-A------------------------------------------------------------CA.........................................................................................................................................................................................................................1920.501001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGC------ACA------CACACACA------CA-----------------------CCACA.................................................................................................................................................2340.251001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................CACACAAACACGC------ACA------CACACACA------CA-----------------------......................................................................................................................................................26130.081001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGC------ACA------CACACACA------CA-----------------------CC....................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................A------------------------------------------------------------CACACACAAACACGC------ACA------C............................................................................................................................................................................................20200.051000000000000000100000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGC------ACA------CACACACA------CA-----------------------CC....................................................................................................................................................18200.051001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAAACACGC------ACA------CACACACA------CA-----------------------......................................................................................................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAACACGC------ACA------CACACACA------CA-----------------------......................................................................................................................................................22200.051000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................CACACAAACACGC------ACA------CAC..........................................................................................................................................................................................19200.051000000000000001000000000000000000000000000000000000000000000000
droMoj3
GTGCATAAGAAATCTGGTTGCAACACG------GG---------------------------------------------------------------------------CGTTGATGTGTTCTACTACAGGTAA-CCAAGCACAT-------TACTTGGC----------TGCT-ATTTAG--------GC------AGGTAC--AC----GGTGAAGGTGGAGCCTGG-CAACTAACGTAAATTGTAATATAAACACAAAA--A-C--------------------ATAAAGTGACTGCACG-TGCGATA-----------A--CGA-A--TACGTTTA-ACTCACTCTCACTACTCTCTTTTTTGTTATTACATTTGCC-ACACACCA--------------------------------------ACACACTCCCACACACACACTTGCACATAAAAACATATACACATACGCAC--A------------CA-----------------CGAAAT-------TTC----CCACCCTC--------------ATACTTTGCGTTCCTGAACCGTTCATCT-A----TTGGATG----TG---C---ACAGCCCGACAGGCAAACGAATTGAGAGTAAACCGCAATTAGCACGTCAATTGASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGGCAAACGAATTGAGAGTA........................2211.001000001
........................ACG------GG---------------------------------------------------------------------------CGTTGATGTGTTCTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACACACACTTGCACAT..............................................................................................................................................................................................................18110.091100000
droGri2
GTACACAGAAAATCGAGCTGCAATTCG------GG---------------------------------------------------------------------------CGTTGATGTTTTCTACTACAGGTAA-CCAAGCAA-GTA--AATTACTCGGCTGATCATT-------------------AAGCAAGCGCAGGTACACAC----GGTGAAGGTGAAACCTGGCAAACTAACGTTAACTGTAATTTACACACAAAC--A-CACACACAGAA------ACACATCTG-CGACTGCACG-TGCGATA-----------A--CGA-AT--ACGTTGT-ACTCACTCTCACTATT---TTTTGTTTTATGACATTTACC-A----------------------------------------------------------CACACAAACACACACACCCACACATA------CGCACACGCACAAACACCCACCCCCA-------------CCAAC-----CAAA---AATCCAACAAA---AAACTATC-----------------------CCCCACCCAACC-AATTTGGATG--TGT-AC---GCAGCCCGACAGGCAAAAGAATTGAAAGCAAACCGCAATTAGCACGCCAATTGASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
GTACGGA---AATCGGCGAATA---------------------------------------------GCAG---CAGCGC------AC---CCAATAATAATAACAACAAAGTGGATGTCTTTTACTACAGGTAA-GGACACCGACCA-------------------GGACTGCA------GC---TTA------------------------------------------------AT-----------------------G--------------------ATAAAAACCGA-TCATGCACGTTATTTCCTGTAAAGGATATTGCAG-AGATACTTTTA--ATCACTTTCACT-------TTTCTGTTAC---ACACACACACAC---------------A-TATACAATA-CGCGGCACTCACA---CAAA--------CCCACAACTTTGTACATATATGTATA------CATACAA-------CACC--CC--CG----ACTCCGTCACC-ATTACC----ACCT---CCACCTCA---CGAT--------TGCC------------AC----CGTCC-ACA-AATATGTTGCTGTTT-AA---ACAGTCCCACAGGCAAGCGAATTGAAAGCAAACCGCAATTAGCCCGTCAATTGGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACCTCA---CGAT--------TGCC------------AC----CG...................................................................................2013.00330000
...........ATCGGCGAATA---------------------------------------------GCAG---CAGCGC------AC---CCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
............TCGGCGAATA---------------------------------------------GCAG---CAGCGC------A................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACCTCA---CGAT--------TGCC------------AC----CGT..................................................................................2111.00100010
..................................................................................................TAATAACAACAAAGTGGATGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
........................................................................................................................................GGACACCGACCA-------------------GGACTGCA------GT---.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-AA---ACAGTCCCACAGGCAA......................................2011.00100001
dp5
GGGCGAA---AGTCGGGCAGCAGC------AGTTGCGCCACTACCACCAACA---------------GCAG---CAGCAT------CAGCAGCAACAACAAC---AATAAAGTGGATGTTTTTTACTACAGGTAAAAGAAGCTGAGCC-------------------CCATCTCC-AGACAG-------------------------------------------------------------------------------GC--G-GACACATAGATC---CC----------TCCCTGCACGTTGTAA-A---------TCT--CGGAATATACGTTTA--ATCACTCTCACTACT----TTTCTGTTATTACATCCGCATACACACC---CACA-CCACACCACACCAAA----------CAC-----ACA--------CACGCACACGCACACGCCTATGCATA------CACACAAA------CACACACA-----------------TGATCAACC--------A-------------------TCCCCCCACC------------AA----CACCC-ACA-ACTGTGTCCG--TCCTCAAAAACAGTCCAACAGGAAAAAGAATTGAAGGAAAGCAGCAG---------------GSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....AA---AGTCGGGCAGCAGC------AGTTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020100000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA----CACCC-ACA-ACTGTGTCCG--T..............................................................2111.0010100000000
.................CAGCAGC------AGTTGCGCCACTACC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.................................................ACA---------------GCAG---CAGCAT------CAGCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.1110100000000
...............................................CAACA---------------GCAG---CAGCAT------CAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000000
droPer2
GGGCGAA---AGTCGGGCAGCAGC------AGTTGCGCCACTACCACCAACA---------------GCAG---CAGCAT------CAGCAGCAACAACAAC---AATAAAGTGGATGTTTTTTACTACAGGTAAAAGAAGCTGAGCC-------------------CCATCTCC-AGACAG-------------------------------------------------------------------------------GC--G-GACACATAGATC---CT----------TCCCTGCACGTTGTAA-A---------TCT--CGGAATATACGTTTA--ATCACTCTCACTACT----TTTCTGTTATTACATCCGCATACACACC---CACA-CCACACCACACCAAA----------CAC-----ACA--------CACGCACACGCACACGCCTATGCATA------CACACAAA------CACACACA-----------------TGATCAACC--------A-------------------TCCCCCCACC------------AA----CACCC-ACA-ACTGTGTCCG--TCCTCAAAAACAGTCCAACAGGAAAAAGAGTTGAAGGAAAGCAGCAG---------------GSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................................CAACA---------------GCAG---CAGCAT------CAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051010000
droAna3
GGTCGCA---AGTCGGCTAGCAGCGCCAACAGCAACGCCAGCATCACAACCAAT------------AGTAG---------------------CAGCAACAACAACAACAAGGTGGATGTTTTCTACTACAGGTAA-AGAGGATGCGGG-------------------ATA-------------------AGCAGGC------GA--ACTCCCAGACA-------ATCTGG-GGTCTGAC------CCCA-------------------ATGTA-----------------CAGATCACTGCACGCCATGGAA-----------T--CGG-ATATACGATTA--ATCACTTTCACTGCC----TTTCTGTTATTACATTCACATAAATACCACACA-A----CA-TAAA---------------------------------------------------CTATGTATA------CACACACA------CATAC----ACTTGCA-------CACGGTCCACT----A-CTA-------------------------------------------TTCTTTTCC-ATC-GCCGTGTCTA--TTC--CGCCACAGTCCCACAGGCAAGAGGGTCGAGAGCAAGC---------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................CCAAT------------AGTAG---------------------CAGCAACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000100
...............................GCAACGCCAGCATCACAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
.............................................................................................AGCAACAACAACAACAAGGTGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.............................CAGCAACGCCAGCATCACAACCAAT------------AGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
.............................................................................................AGCAACAACAACAACAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18160.061010000
droBip1
GTCCGCA---AGTCGGCCAACAGCGCTAATAATAACGCCAGCATCACAAGCAAC------------AGCAG---------------------CAGCAACAACAACAACAAGGTGGATGTTTTCTACTACAGGTAA-AGAGGATGCGGG-------------------ATA-------------------AGGAGGC------GA--ATTCCCAGACT-------TTCTGG-GGTCTGAC------CCCA-------------------ATGTA-----------------TAGATCACTGCACGCCATGGAA-----------T--CGG-ACATACGATTA--ATCACTTTCACTGCC----TTTCTGTTATTACATTCACATAACTGCCACACA-A----CA-TAAA---------------------------------------------------CTATGTATA------CACACACA------CACAT--ACACTTGCA-------CACGGTCCACT--------A-------------------------------------------TTCTTTTCC-ATC-GCCGTGTCTT--TTC--CGCCACAGTCCCACAGGCAAGAGGGCCGAGAGCAAGC---------------------SizeHit CountTotal NormTotal
No Reads
droKik1
GTCCGCA---AGTCCGGCAGCAGCTCCAATAGCAACGCCAGCGCTACCAACACC------------A------------CCACCGCCAG------CAACAACAATAACAAGGTGGATGTTTTCTACTACAGGTAA-AGACGCTGAGGA----------------GCAGCA-------------------AGCAGG-------------------------------CTGG-GGACTGGG----------------------GGATGGGATGCA---------CCCAATCACGGAACACTGCACGCCGTCCAA-----------T--CGG-ATATATGTTTA--CTCACTTTCACTACC----TTTTTGTTATTACATCCGCATAAACACCACACA-A----CAACACACCACTCGA---------CCCCACAT-------------CACACGCAC------ATGTATA------CACACACA--CACACACCCACA-----------------CGGTCC-------ACCTAACCCACC------------------------------------------TCC-ACC-GCCGTGTTCA--TGTTCCGCCACAGTCCCACAGGAAAACGGGTCGAGAGCAAGCCGCAGTTGGCGCGCCAATTGGSizeHit CountTotal NormTotal
No Reads
droFic1
GTCCGCA---AATCAGGCAGCAGCGCTAATAGCAACGCCAGCAGCAACAACAAC------------AGCAG------T---------AGCAACAACAACAACAATAACAAGGTGGATGTTTTCTACTACAGGTAA-AGAAGAAGAATG-------------------GTACTACAAATATAGA---CTA------------------------------------------------AG----------------------AA--G-GATATA---------CTCCGTATCGGAACACTGCACGCTGTTGAA-----------T--CGG-ATATACGTTTA--ATCACTTTCACTACC----TTTCTGTTATTACATCCAAATCAACACCA----------------------------------------------------ACACACACGCACACGCCTATGTATA------CACACACA------CACACACACACT-------------CGAAC-----CC-AAATAACCCACCCAA---AA--------------------------AATCTCCACC----C-GCCGTGTCCG--TTC--A---GCAGTCCTACAGGAAAAAGGGTCGAGGGAAAGCCGCAG----------------SizeHit CountTotal NormTotal
No Reads
droEle1
GTCCGAA---AATCGGGCAGCAGCTCCAATAGCAACGCCAGCAGCAACAACAAC------------AGCAGCACCACCACCACCGCCAGCAGCAACAACAACAATAACAAGGTGGATGTTTTCTACTACAGGTAA-AGAAGAAGAGTG-------------------GTAGTAC--ATATAGA---CTA------------------------------------------------AG-----------------------G--G-GATATA---------CTAAATATTGGAACACTGCACGCTGTTGAA-----------T--CGG-ATATACGTTTA--ATCACTTTCACTACC----TTTCTGTTATTACATCCACATATACACCA--------------------------------------ACATA--------CACACACACGCACACGCCAACGCATA------CACACACA------------CA-----------------CGATCC-------ACCTAACCCACCCAA--------------------------------ATCTCCACCC-ACC-GCCGTGTCCG--TTC--A---ACAGTCCCACAGGAAAAAGGGCCGAGGGAAAGCCGCAG----------------SizeHit CountTotal NormTotal
No Reads
droRho1
GTCCGAA---AATCGGGCAACAGCTCCAATAGCAACGCCAACAGCAACAACAAC------------AGCAG------CACCACCGCCAGCAGCAACAACAACAATAACAAGGTGGATGTTTTCTACTACAGGTAA-AGAAGAAGAGTG-------------------GTACTAC--ATATAGA---CTA------------------------------------------------AG----------------------AG--G-GATATA---------CTAAATATCGGAACACTGCACGCTGTTGAA-----------T--CGG-ATATACGTTTA--ATCACTTTCACTACC----TTTCTGTTATTACATCCACATCTACACCA--------------------------------------ACATA--------CACACACACGCACACGCCTATGCATA------CACACACA------------CA-----------------CGATCC-------ACCTAACCCACCCAA--------------------------------ATCTCCACCC-ACC-GCCGTGTCCG--TTC--A---ACAGTCCCACAGGAAAAAGGGCTGAGGGAAAGCCGCAG----------------SizeHit CountTotal NormTotal
No Reads
droBia1
GTCCGCA---AGTCGGGCAGCAGCTCCAATAGCAACGCCAGCAGCAACAACAACAACACCAGCAGCAGCAG---CAGTGCCACAGCCAGCGGCAACAACAACAATAACAAGGTGGATGTTTTCTACTACAGGTAA-AGAGGAAGAGCGAGGA---------------GCACT-CC-ATATAGA--ACTA------------------------------------------------AGGGAG------------------GG--G-GATATGTA-----TAGCCAATATCGGAACACTGCACGCCGTTCAT-----------T--CGG-ATGTAATTTTA--ATCACTTTCACTACC----TTTCTGTTATTACATCCACATCAAC--CAACCA-A----CA-CACACTACC----------CAC-----ACA--------CACACACACGCACACGCCTATGCATA------CATAC--A------------CA-----------------CGAACC-------ACCTAACCCACCAAA---AA--------------------------AATCTCCACCC-A----CCGCGTCCG--CTC--A---ACAGTCCCACAGGAAAAAGGGCGGAGGGAAAGCCGC------------------SizeHit CountTotal NormTotal
No Reads
droTak1
GTCCGCA---AGTCCGGCAGCAGCTCCAATAGCAACGCCAGCAGCAACAACAACAAC------AGCAGCAG---CAGCGCCACAGCCAGCAGCAACAACAACAATAACAAGGTGGATGTTTTCTACTACAGGTAA-AGAAGAAGAGGA----------------GC-GCACT-CT-ATATAGA---CTA------------------------------------------------AG----------------------GG--GAGATATA---------TCTAAAATCGGAACACTGCACGCTGTTGCA-----------T--AGG-ATAAACTTTTA--ATCACTTTCACTACC----TTTCTGTTATTACATCCACATCAAC--CAA-C--A----CA-CACACCACT----------CACA---------------AACACACACGCACACGCCTATGTATA------CACAC--A------------CA-----------------CGATCC-------ACCTAACCCACCAAAAAAAA--------------------------AATCTCCACCC-ACC-GCCGAGTGCG--TTC--A---GCAGTCCCACAGGAAAAAGGGCGGAGGGAAGGCCGCAG---------------GSizeHit CountTotal NormTotal
No Reads
droEug1
GTCCGCA---AATCGGGCAATAGCTCCAATAGCAACGCCAGCAGCAACAACAAC------------AGCAG---CACCACCACAGCCA---GCAACAACAACAATAACAAGGTGGATGTTTTCTACTACAGGTAA-AGAAGAAGAACA----------------------CTACT-ATATAGA---C-A------------------------------------------------AG----------------------GG--G-GATATA---------CCTAATATCGGAATACTGCACGCTGTTGAA-----------T--CGG-ATATACGTTTA--ATCACTTTCACTACC----TTTCTGTTATTACATCCGCATCAACAC----------------ACACC-----------------------A--------CACACACACGCACACGCCTATGTATA------CACAC--A------------CA-----------------CGAACC-------ACCTAACCCACCTAA--------------------------------AACTCCACCC-ACC-GCCGCGTCCG--TTC--A---ACAGTCCCACAGGAAAAAGGGCGGAGGGAAAGCCGCAG----------------SizeHit CountTotal NormTotal
No Reads
dm3
GTCCGAA---AGTCCGGCAGCAGCGCCAATAACAACGCCAGCAGCAACAACAAC------------AGC------AGTGCCACAGCCAGCAGCAACAACAACAATAACAAGGTGGATGTTTTCTACTACAGGTAA-AGAAGAAGAGCA-------------------GAATTACT-ATATAGACTACT--------------------------------------------------------------------------------ATATA---------CCTAAAATCGGAACACTGCACGCTGTTTAA-----------T--CGG-ATAAACGTTTATAATCACTTTCACTACC----TTTCTGTTATTACATCCGCATAACCAC---ACACA----CA-CACACCATA-TA---------CAC--------------CACACACACGCATACGCCTATGTATA------CACACGCA------------CA-----------------CGAACTACC----ACCTAACCCACCAAA-------------------------------AATATCCATCC-ACC-GCCGTGTCTG--TTC--A---GCAGTCCCACAGGAAAAAGGGCGGAGGGAAAGCCACAG----------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................TA-TA---------CAC--------------CACACACACGCATA...............................................................................................................................................................................................................21120.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-------------------------------AATATCCATCC-ACC-GCCGT......................................................................21110.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTATA------CACACGCA------------CA-----------------CGA...................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCCCACAGGAAAAAGGGCG...............................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................AAACGTTTATAATCACTTTCA......................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CCGAA---AGTCCGGCAGCAGCGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................A---------CCTAAAATCGGAACACTGCACG.......................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000
...............................................................................................................................................................................................................................................................................................AATCGGAACACTGCACGCTGT...................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................TATAATCACTTTCACTACC----TT...........................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCACAGGAAAAAGGGCGGAGGGA.........................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................CTGCACGCTGTTTAA-----------T--CGG-ATA..........................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
.................................................................................................ACAACAATAACAAGGTGGATG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......A---AGTCCGGCAGCAGCGCCAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................CACACCATA-TA---------CAC--------------CACACAC......................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GAA---AGTCCGGCAGCAGCGCCAAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................CAACAACAAC------------AGC------AGTGCCAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCACAGGAAAAAGGGCGGA.............................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAGGGCGGAGGGAAAGCC....................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCCATCC-ACC-GCCGTGTC...................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000001000000000000000
..............................................................................................................................................................................................................................................................................................AAATCGGAACACTGCACGCTGT...................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGCGGAGGGAAAGCCG...................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................ACAACAATAACAAGGTGGATGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.TCCGAA---AGTCCGGCAGCAGCGCCAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................TATTACATCCGCATAACCAC---A..............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.......................................................................................................................................................................................CTACT--------------------------------------------------------------------------------ATATA---------CCTAAAATCGG..................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAAAAAGGGCGGAGGGA.........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................ACAACAATAACAAGGTGGATGTTTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................ACAACAACAATAACAAGGTGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGGAAAAAGGGCGGAGGG..........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
............................................................................................................................................................................................................................................................................................TAAAATCGGAACACTGCACGCT.....................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCCATCC-ACC-GCCGTGT....................................................................2011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................AACACTGCACGCTGTTTAA-----------T--CG...............................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCCACAGGAAAAAGGG.................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGTCCCACAGGAAAAAGGGCG...............................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATA------CACACGCA------------CA-----------------CGAACTA...............................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................GCACGCTGTTTAA-----------T--CGG-ATAA.........................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCACCAAA-------------------------------AATATCCATCC-A..............................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCCACAGGAAAAAGGGCGGAGGGA.........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...................................................................GC------AGTGCCACAGCCAGCAGCAACA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTC--A---GCAGTCCCACAGGAAAAA....................................2211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................CTACC----TTTCTGTTATTACATC.............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.TCCGAA---AGTCCGGCAGCAGCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................ACGCCAGCAGCAACAACAAC------------A....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................TAAAATCGGAACACTGCACGC......................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--TTC--A---GCAGTCCCACAGGAAA......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCCACAGGAAAAAGGGC................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................TA---------CCTAAAATCGGAACACTGCACGCT.....................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CGCCAATAACAACGCCAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................CGCCAATAACAACGCCAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG--TTC--A---GCAGTCCCACAGGA........................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGGCGGAGGGAAAGCCACA.................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...CGAA---AGTCCGGCAGCAGCGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
........................................................................................................TAACAAGGTGGATGTTTTCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................GCGCCAATAACAACGCCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................CAACAACAAC------------AGC------AGTGCCACAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
GTCCGAA---AGTCCGGCAGCAGCGCCAAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................A---------CAC--------------CACACACACGCATACG.............................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................C------AGTGCCACAGCCAGCAGCAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................ATCGGAACACTGCACGCTGT...................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCATACGCCTATGTATA------CACA.........................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................ACAACAATAACAAGGTGGAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCA------------CA-----------------CGAACTACC----ACCTAAC..................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................ACTACAGGTAA-AGAAGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
................................................................................................................................................................................................................................................................................................ATCGGAACACTGCACGCTGTT..................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................CACACACGCATACGCCTATGT......................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................AC---ACACA----CA-CACACCATA-TA---------CAC--------------C............................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................CAACAAC------------AGC------AGTGCCACAGCCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................................................................CTAAAATCGGAACACTGCAC........................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................TAAAATCGGAACACTGCACGCTGTTTA................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---GCAGTCCCACAGGAAAAAGG..................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCTATGTATA------CACACGC......................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCCATCC-ACC-GCCGTG.....................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................GCA-------------------GAATTACT-ATATAGACTA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCC-ACC-GCCGTGTCTG--TT.............................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCCATCC-ACC-GCCGTGTCTG--TT.............................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTC--A---GCAGTCCCACAGGAAA......................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATA------CACACGCA------------CA-----------------CGAACTAC..............................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................ACAATAACAAGGTGGATG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................ACAACAAC------------AGC------AGTGCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-ACC-GCCGTGTCTG--TTC--A---GCAG..................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCACAGGAAAAAGGGC................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................CCTAAAATCGGAACACTGC..........................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCATCC-ACC-GCCGTGTCTG--TTC--..........................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.............................................................................................................................................AAGAGCA-------------------GAATTACT-ATATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
...................................................AAC------------AGC------AGTGCCACAGCCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................AGCAACAACAACAATAACAAGGTGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................TTACATCCGCATAACCAC---ACA............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCAAA-------------------------------AATATCCATCC-ACC-...........................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC--A---GCAGTCCCACAGGAAAAA....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................T-ATATAGACTACT--------------------------------------------------------------------------------ATATA---------CCTAAAATCG...................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................AGAAGAAGAGCA-------------------GAATTACT-.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATA------CACACGCA------------CA-----------------CGAACTACC----.........................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCATCC-ACC-GCCGTGTCTG--T..............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................CA-CACACCATA-TA---------CAC--------------CACA.........................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
......................................................................................................................................................................................................................................................................................................ACACTGCACGCTGTTTAA-----------T--CG...............................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................TA---------CCTAAAATCGGAACACTGC..........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...........................................GCAACAACAAC------------AGC------AGTGCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATCCATCC-ACC-GCCGTGT....................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................ACTACT--------------------------------------------------------------------------------ATATA---------CCTAAAATCG...................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................TAACAAGGTGGATGTTTTCTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................CAACAATAACAAGGTGGATGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................CAGCAACAACAAC------------AGC------AGTGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
droSim2
GTCCGAA---AGTCCGGCAGCAGCGCCAATAGTAACGCCAGCAGCAACAACAAC------------AGCAG---CAGTGCCACAGCCAGCAGCAACAACAACAATAACAAGGTGGATGTTTTCTACTACAGGTAA-AGAAGAAGAGCA-------------------GCACTACT-ATATAGAATACT--------------------------------------------------------------------------------ATATA---------CCTAAAATCGGAACACTGCACGCTGTTGAA-----------T--CGG-ATAAACGTTTA--ATCACTTTCACTACC----TTTCTGTTATTACATCCGCATAAACACA---CACACACACA-CACGCCATA-TA---------CAC--------------CACACACACGCACACGCCTATGTATA------CACACGCA------------CA-----------------CGAACTACCACC-ACCTAACCCACCAAA-------------------------------AATATCCATCC-ACC-GCCGTGTCTG--TTC--A---GCAGTCCCACAGGAAAAAGGGCGGAGGGAAAGCCGCAG----------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................................................................................................CAACAATAACAAGGTGGATGTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200000002000000000
........................................................................................................................................................................................................................................................................................................................................................TCACTTTCACTACC----TTTCTGT......................................................................................................................................................................................................................................................................................................2111.00100000100000000000
......................................................................................................................................................................................................................................................................................................ACACTGCACGCTGTTGAA-----------T--CG...............................................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
.TCCGAA---AGTCCGGCAGCAGCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
.............................................................................................................................................................................CT-ATATAGAATACT--------------------------------------------------------------------------------ATATA---------.............................................................................................................................................................................................................................................................................................................................................................................................1911.00100001000000000000
...............................................................................................................................ACAGGTAA-AGAAGAAGAGCA-------------------G...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
................GCAGCAGCGCCAATAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.00100000000001000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGAAAAAGGGCGGAGGGTTT.......................2211.00100000000000001000
..........................................................................................................................................................................................................................................................................................................TGCACGCTGTTGAA-----------T--CGG-ATAAA........................................................................................................................................................................................................................................................................................................................................2311.00101000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATGTATA------CACACGCA------------CA-----------------C.....................................................................................................................................................2011.00100001000000000000
.........................................CAGCAACAACAAC------------AGCAG---CAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100000000000001000
........................................GCAGCAACAACAAC------------AGCAG---.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100000000000100000
........................................GCAGCAACAACAAC------------AGCAG---CA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100000000001000000
droSec2
GTCCGAA---AGTCCGGCAGCAGCGCCAATAGTAACGCCAGCAGCAACAACAAC------------AGCAG---CAGTGCCACAGCCAGCAGCAACAACAACAATAACAAGGTGGATGTTTTCTACTACAGGTAA-AGAAGAAGAGCA-------------------GCACTACT-ATATAGAATACT--------------------------------------------------------------------------------ATATA---------CCTAAAATCGGAACACTGCACGCTGTTGAA-----------T--CGG-ATAAACGTTTA--ATCACTTTCACTACC----TTTCTGTTATTACATCCGCATAAACACA---CACA----CA-CACGCCATA-TA---------CAC--------------CACACACACGCACACGCCTATGTATA------CACACGCA------------CA-----------------CGAACTACCACC-ACTTAACCCACCAAA-------------------------------AATATCCATCC-ACC-GCCGTGTCTG--TTC--A---GCAGTCCCACAGGAAAAAGGGCGGAGGGAAAGCCGCAG----------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.TCCGAA---AGTCCGGCAGCAGCGCCAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010001
......A---AGTCCGGCAGCAGCGCCAATAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100
droYak3
GTCCGAA---AATCCGGCAGCAGCGCCAATAGCAACGCCAGCAGCAACAACAAC------------AGCAG---CAGTGCCACAGCCAGCAGCAACAACAACAATAATAAGGTGGATGTTTTCTACTACAGGTAA-AGAAGAAGAGCA-------------------ACACTACT-ATATAGTGTACT--------------------------------------------------------------------------------ATATA------CTACCTAAAATCGGAACACTGCACGCTGTTGCA-----------T--CGG-ATAAACGTTTA--ATCACTTTCACTACC----TTTCTGTTATTACATCCGCATAAAC--CAAACA-C----CA-TACACCAC-----------------ACAT---------CACACACACGCACACGCCTATGTATA------CACACACA------CA----CA-----------------CGAACT-------ACCTAACCCACCCAA--------------------------------ATCTCCATCC-ACC-GCCGTGTCTG--TTC--A---GCAGTCCCACAGGAAAAAGGGCGGAGGGGAAGCCGCAG----------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................................GCAACAACAAC------------AGCAG---CAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2070.14100000010000
.......................................AGCAGCAACAACAAC------------AGCAG---C............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100100000000
droEre2
GTCCGAA---AATCCGGCAGCAGCACCAATAGCAAC------------AACA---------------GCAG---CAGTGCCACAGCAGGCAGCAACAACAACAATAACAAGGTGGATGTTTTCTACTACAGGTAA-AGAAGAAGAGCA-------------------GCACTACT-ATATAGAGTACT--------------------------------------------------------------------------------ATATA------CTACCTAAAATCGGAACACTGCACGCTGTTGAA-----------T--CGG-ATAAACGTTTA--ATCACTTTCACTACC----TTTCTGTTATTACATCCGCATAAAC--CACACA-T----CA-TACAC---------------------------------CACACACACGCACACGCCTATGTATA------CACACACA------CC--CACA-----------------CGAACT-------ACCTAACCCACCCAA--------------------------------ATCTCCATC----C-GCCGTGTCTG--TTC--A---GCAGTCCCACAGGAAAAAGGGCGGAGGGAAAGCCGCAG----------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................ATAGCAAC------------AACA---------------GCAG---CAGTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
......................................................................................................................................A-AGAAGAAGAGCA-------------------GCACTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001000

Generated: 05/19/2015 at 12:40 PM