ID:

dvi_4058

 Coordinate:

scaffold_12855:5643225-5643375 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [Dvir\GJ10277-cds]; exon [dvir_GLEANR_10211:1]; intron [Dvir\GJ10277-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CAATGTCTCTTGCAGCAACACCGACAACAGCTGCAGCCAAAGTCAATCAGGTGAGTGTTGAATTTCAAGTTATTTTTTTCTCCAATCTAAACTCCATTTTTGCTACTCTTACGCTCTTCTGCTCTTTGGCTTTCCCTTGTCAGTAAACGTATGTATTTATGTACATTATTTTTCGTTACATTTTAAGTGGTTTTGTAGCCACTGTGCGAGCTACATACATATGTATGTGTATTGAAATGTTTTGCAGCTGC
**************************************************..((((((.((....((((.............................))))....))..))))))..........(((((..((((((...((((.((.((((((....)))))).......))))))....)))).))......)))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060679
140x9_testes_total
 GSM1528803
follicle cells		 V053
head
 M061
embryo
 SRR060685
9xArg_0-2h_embryos_total
 SRR060667
160_females_carcasses_total
 SRR060670
9_testes_total
 SRR060672
9x160_females_carcasses_total
 SRR060669
160x9_females_carcasses_total
 V047
embryo
 M028
head
 SRR060665
9_females_carcasses_total
 SRR060668
160x9_males_carcasses_total
 SRR060675
140x9_ovaries_total
 SRR060677
Argx9_ovaries_total
 SRR060680
 9xArg_testes_total
 SRR060681
Argx9_testes_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060659
Argentina_testes_total
 SRR060687
9_0-2h_embryos_total
 V116
male body		 SRR060666
160_males_carcasses_total
...............CAACACCGACAACAGCTGC......................................................................................................................................................................................................................... 19 0 1 4.00 4 2 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................CAACAGCTGCAGCCAAAGTC............................................................................................................................................................................................................... 20 0 1 3.00 3 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........CTTGCAGCAACACCGAC.................................................................................................................................................................................................................................. 17 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....GTCTCTTGCAGCAACACCGA................................................................................................................................................................................................................................... 20 0 1 2.00 2 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................AACACCGACAACAGCTGC......................................................................................................................................................................................................................... 18 0 1 2.00 2 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............GCAACACCGACAACAGCTGCAGC...................................................................................................................................................................................................................... 23 0 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....GTCTCTTGCAGCAACACCGAC.................................................................................................................................................................................................................................. 21 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................ACACCGACAACAGCTGCAGCCAA................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................TGTATTGAAATGTTTTGCAGC... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................AACACCGACAACAGCTGCAGCCA.................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..........TGCAGCAACACCGACAACAGCT........................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..............GCAACACCGACAACAGCTGC......................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
................AACACCGACAACAGCTGCAG....................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................ACACCGACAACAGCTGCAGCCA.................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......CTCTTGCAGCAACACCGAC.................................................................................................................................................................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................GCCAAAGTCAATCAGGTGAGTGTTGAAT............................................................................................................................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................ACATATGCAAGTGTATTGCAATG............ 23 3 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................GGCAACAGCTGCAGCCAAAGT................................................................................................................................................................................................................ 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......CTCTTGCAGCAACACCGA................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.............................GCTGCAGCCAAAGTCAATCAGAC....................................................................................................................................................................................................... 23 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
................AACACCGACAACAGCTGCA........................................................................................................................................................................................................................ 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................CACCGACAACAGCTGCAGCCAAA.................................................................................................................................................................................................................. 23 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............CAACACCGACAACAGCTGCA........................................................................................................................................................................................................................ 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..ATGTCTCTTGCAGCAACACCGAC.................................................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................AACACCGACAACAGCTGCAGCC..................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................ACGCTCTTCCGATCATTGGCT........................................................................................................................ 21 3 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.AATGTCTCTTGCAGCAACACCGA................................................................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................ACAGCTGCAGCCAAAGTCAATCAGAC....................................................................................................................................................................................................... 26 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......CTCTTGCAGCAACACCGACA................................................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
CAATGTCTCTTGCAGCAACACC..................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....TCTCTTGCAGCAACACCGACAACAGCT........................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
........CTTGCAGCAACACCGACAACAGCT........................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........GCAGCAACACCGACAACAGCT........................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.AATGTCTCTTGCAGCAACACC..................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................TGCAGCCAAAGTCAATCAGAC....................................................................................................................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................CAGCCAAAGTCAATCAGA........................................................................................................................................................................................................ 18 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................ACGCTCTTCCGATCTTTGACT........................................................................................................................ 21 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
............................................................................................................................TTTGGGTTTCCCTTGTC.............................................................................................................. 17 1 5 0.40 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................GCAGCCAAAGTCAATCAGACG...................................................................................................................................................................................................... 21 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
................................GCAGCCAAAGTCAATCAGAC....................................................................................................................................................................................................... 20 2 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................CAGCTGCAGCCAAAGTCAA............................................................................................................................................................................................................. 19 0 3 0.33 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................GACAACAGCTGCAGCAAAAGGGA.............................................................................................................................................................................................................. 23 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
......CTCTAGCAGCAACACCCA................................................................................................................................................................................................................................... 18 2 14 0.07 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................CTTATGGTCTTTGGCTTT...................................................................................................................... 18 2 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................GTATTTTATTTTTCGTTACA....................................................................... 20 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
..........................................................................................................................................................................................................TGCGGGAGCTACATATATAT............................. 20 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

GTTACAGAGAACGTCGTTGTGGCTGTTGTCGACGTCGGTTTCAGTTAGTCCACTCACAACTTAAAGTTCAATAAAAAAAGAGGTTAGATTTGAGGTAAAAACGATGAGAATGCGAGAAGACGAGAAACCGAAAGGGAACAGTCATTTGCATACATAAATACATGTAATAAAAAGCAATGTAAAATTCACCAAAACATCGGTGACACGCTCGATGTATGTATACATACACATAACTTTACAAAACGTCGACG
**************************************************..((((((.((....((((.............................))))....))..))))))..........(((((..((((((...((((.((.((((((....)))))).......))))))....)))).))......)))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060678
9x140_testes_total
 SRR060672
9x160_females_carcasses_total
 V116
male body		 SRR060658
140_ovaries_total
 SRR060662
9x160_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060660
Argentina_ovaries_total
 SRR060670
9_testes_total
 V053
head
 M028
head
 SRR060688
160_ovaries_total
 M061
embryo
 SRR060666
160_males_carcasses_total
 SRR060671
9x160_males_carcasses_total
 M047
female body
 SRR1106728
larvae
 SRR060667
160_females_carcasses_total
 SRR060684
140x9_0-2h_embryos_total
 M027
male body
........................................................................AAAAAAAGAGGTTAGATT................................................................................................................................................................. 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................CGCTCGATGTAAGGATACCTA......................... 21 3 1 2.00 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................CGTTCGATGTATGGATACCTACA....................... 23 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................GTTTCAGTTAGTCCACTCACA................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................TCGATGTATGGATACCTACA....................... 20 2 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................AAAAGGTCACTAAAAAAAGAGGT....................................................................................................................................................................... 23 3 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........AACGTCGTTGTGGCAGTT................................................................................................................................................................................................................................ 18 1 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................TGTGCGAGAAAACGAGAAACC.......................................................................................................................... 21 3 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
......................CTGCTGTCGACGTAGGTCTCA................................................................................................................................................................................................................ 21 3 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.......AAAACGTCGTAGTGGCTGT................................................................................................................................................................................................................................. 19 2 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................TCGATGTAAGGATACCTACA....................... 20 3 8 0.25 2 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...........................................................................................................................................................................................................CACGTTCGATGTAAGGATAC............................ 20 3 5 0.20 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..........................TGTCGACGTCGGTTACAGGT............................................................................................................................................................................................................. 20 2 5 0.20 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................CGTTCGATGTAAGGATACATA......................... 21 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................CGTTCGATGTAAGTATACCTA......................... 21 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................................CGTTCGATGTATGGATAC............................ 18 2 9 0.11 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................TCGAAGGGGAACAGGCAT.......................................................................................................... 18 3 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0
................................................................................................................................CTAAGGGGAACAGTCAT.......................................................................................................... 17 2 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.............................................................................................................................................................................................................CGCTCGATGTAAGGATACC........................... 19 3 15 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
................................................................................................................................................................................................................................TCCACGTAACTTTCCAAAAC....... 20 3 15 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
............................................................................................................................................................................................................CCGCTCGATGTAAGGATAC............................ 19 3 16 0.06 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...............................ACGGCGGTTTCTGCTAGTCC........................................................................................................................................................................................................ 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
..............................................................................................................TGCGAGAAGGCGACAAATC.......................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12855:5643175-5643425 - dvi_4058 CAATGTCTCTTGCAGCAACACCGACAACAGCTGCAGCCAAAGT--CAATCAGGTGAGT----GT------------------------TGAATTTCAAGTTATTTTTT---------TCTCCAATCTAAACTCCATTTT--------TGCT---------------------------------ACTCTTACGCTCT--------TC-----------------------------TGCTCTT---TGGCTTTCCCTTGTCAGTAAACGTATGTATTTATGTACATTATTTTTCGTTACATTTTAAGTG---------------------------------GTTTTGTAGCCACTGTGCGA--------GCT--ACATACAT--A--TGTATGT--GTATTGAAA----TGTTTTGCAGCTGC
droMoj3 scaffold_6540:5966312-5966518 - CAATGTCTCTTGCAGCAACACGGACAACAGCTGCAGCCAAAGT--CAATCAGGTGAGT----GT------------------------TGAATTTCAAGTTTTTTTTTCTT------GCTACTTTTTCAACTCCATTTC--------TACA---------------------------------ACTCTTTCGCTCT--------TA-----------------------------CGCTCTT---TGGCTTTCCCTTTGAAG--------------------------------------------------------------------CGCAAAATGCGGCTGTGCGGCCACT----------------------GGGCT--A--AGTGTGT--GCATTGAAAT-TTTATTTTGCAG---C
droGri2 scaffold_14906:8363803-8364037 + CAATGTCTCCTGCAGCAACACCGACAACAGCTGCAGCCAAAGT--CAATCAGGTGAGT----GT------------------------TGAATTTCAAGTTTTTTCTTCTT------TTTTTTCTTAT----ATTTTCTTACTCC--------------------------TTTGGCTCTCCACACTCTTTCGCGCGCCTTCTCTCT-----------------------------CGCTCTCTTATGGCTTTCCCTTG---------------------------------------------------TCCATTTGATTTCAATGCATTCGCA----TCGACTGTTGCTCCACT-------------------------------------GT--GCATTCAAACTTTTATTTTGCAGCTGC
droWil2 scf2_1100000004902:6597551-6597770 + dwi_2552 CGGCGTTTCCTGCAGCAATACGGACAACAGCTGCAGTCAGAGT--CAATCAGGTGAGT----GTGTATGTGTGTTTAAGTGAATGTGTTGAATATCAAGTTTA-------T------CCTAC--------------------------------------------------------------ACTCTTTCTCTCT--------GTCTCTCTCTATCTCTTATTGTGTGTGCTCTCTTG-------------------------------------------------------TTGATTTTTAGTTTCTTAAT-----T---------------------TTA---------------AA------G--CT--GTACAAAAGTCAAT--TTGTTTGGA------A-AGTTCTCGGCAGCTGC
dp5 XL_group3b:83745-83885 + CAACAACACCAACAGCAACATTTACCGCAGCAGCATTTAATTC--GGGCGATACCTGT----AT----------------------CAAGGTG----AGT-----------CGTGATCTCCC--------------------------------------------------------------ACTCTCCCACTCT--------CTCTCCCTCTCTCTCTCCTCGTTCTCTCTCTCTCTCTC---TCTCTCTCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CT
droPer2 scaffold_9:526514-526656 - CAGCGA--CCGACAGAAGCTCCAACAACAT--TCAGTCGGCGC--GAGTCGAGCGAGCGAGCCC--------------------------CATTCAGAG-------------------------------CCCCATT------------------------------CGCCG------------ATTGCTTTGCTCA---TTTCTGTCTGCCTTTTAC----------------------------------------------------------------------------------------A---------------------------------------------------------------CCTGC--ATGTGC--GTGT--GCGTGTGCG------T-GTGCC---------TT
droAna3 scaffold_12916:11225236-11225314 + CAGT------TGCAACAACACCAGCAGCAACAGCAACCGCAATTTCAACCCAGCTATG-A--GT------------------------CGCAGTTCCAGC-----------CACAAT--------------------------------------------------CTAC---------------------------------------------------------------------------------------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------C
droBip1 scf7180000395971:1090215-1090269 + TGGCGTTTCCTGCAGCAACACGGATAACAGCTGCAGGCAGAGT--CAGTCAGGTGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000301923:294076-294124 - CGGCGTTTCCTGCAGCAACACGGACAACAGCTGCAG------T--CAGTCAGGTGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000453488:231959-232022 + CGGCATTTCCTGCAGCAACACGGACAACAGCTGCAGCCAGAGT--CAGTCAGGTGAGC----AC------------------------TTAACT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491080:2095209-2095270 + CGGCATTTCCTGCAGCAACACGGACAACAGCTGCAGCCAGAGT--CAGTCAGGTGAGC----AC------------------------TTAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000780079:107382-107479 - CAG---------CAACAATGCCAAGAACAACAGCAACCAAGTC--GAGTTTCTTGAAA----TA------------------------TTTATT-------------TTAT------ATTACGCTTTTCGTTTTA-----------------------------------------------------------------TTTTTATTTCCCTTTTTC----------------------------------------------------------------------------------------TC-------------------------------------------------------------------------------------------------------------------T
droBia1 scf7180000302113:3460232-3460293 - TGGCATTTCCTGCAGCAACACGGACAACAGCTGCAGCCAGAGT--CAGTCAGGTGAGC----AC------------------------TGGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000410579:70753-70808 + CGGCATTTCCTGCAGCAACACGGACAACAGCTGCAGCCAGAGT--CAGTCAGGTGAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409797:1226989-1227143 - CCCACC-----------------------------------------------------------------------------------------------------TTAT------CTTCCTCTTCC----CCACTCCCACTCTTTCGTCGCCGTTACTCTCTATTTACCAAAAGCTCTTCATGTGCGACCGCATGTTGTTTCTCC----------------------------------------------------------------------------------------TTCCCTTTTCCTTTGCTTAT-----------------------------------------------ATTATATGTATGTACATAC----ATAT--GTATTTGAA------TTGAA-----------AT
dm3 chr3R:7589185-7589255 - CGGCATTTCCTGCAGCAACACGGACAACAGCTGCAGCCAGAGT--CAGTCAGGTGAGC----AA----------------------TTTGAGTTTCTAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 3r:13511061-13511131 + CGGCATTTCCTGCAGCAACACGGACAACAGCTGCAGCCAGAGT--CAGTCAGGTGAGC----AC----------------------TTTGAGTTCCTAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_34:427099-427177 + ATTATTATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTAGTTTT----------------------------------------------------------------------------------------------------------TACGTT---------------------------------GTT---------------ACATTGTGAGGCTAC--ACACAC--AATT--CTGTTTACA------T-CATGTTTAGAAGCAAG
droYak3 3R:16829068-16829132 + CGGCATTTCCTGCAGCAACACGGACAACAGCTGCAGCCAGAGT--CAGTCAGGTGAGC----AC----------------------TTTGAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4770:14027446-14027510 + CGGCATTTCGTGCAGCAACACGGACAACAGCTGCAGCCAGAGT--CAATCAGGTGAGC----AC----------------------TTTGAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
CAATGTCTCTTGCAGCAACACCGACAACAGCTGCAGCCAAAGT--CAATCAGGTGAGT----GT------------------------TGAATTTCAAGTTATTTTTT---------TCTCCAATCTAAACTCCATTTT--------TGCT---------------------------------ACTCTTACGCTCT--------TC-----------------------------TGCTCTT---TGGCTTTCCCTTGTCAGTAAACGTATGTATTTATGTACATTATTTTTCGTTACATTTTAAGTG---------------------------------GTTTTGTAGCCACTGTGCGA--------GCT--ACATACAT--A--TGTATGT--GTATTGAAA----TGTTTTGCAGCTGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............CAACACCGACAACAGCTGC......................................................................................................................................................................................................................................................................................................................................................................................................1914.004002000000000000001000000000000000000000000000000000000000000100
........................CAACAGCTGCAGCCAAAGT--C..........................................................................................................................................................................................................................................................................................................................................................................................2013.003000000000000000001000000000001000000000000000000000000000001000
........CTTGCAGCAACACCGAC...............................................................................................................................................................................................................................................................................................................................................................................................................1712.002000000000000000000000000000000000000000000000000000000000000002
....GTCTCTTGCAGCAACACCGA................................................................................................................................................................................................................................................................................................................................................................................................................2012.002001000000000000000100000000000000000000000000000000000000000000
................AACACCGACAACAGCTGC......................................................................................................................................................................................................................................................................................................................................................................................................1812.002000000000000000000001000000000000001000000000000000000000000000
..............GCAACACCGACAACAGCTGCAGC...................................................................................................................................................................................................................................................................................................................................................................................................2312.002001100000000000000000000000000000000000000000000000000000000000
....GTCTCTTGCAGCAACACCGAC...............................................................................................................................................................................................................................................................................................................................................................................................................2112.002001000000000000000000000000000000000000000000000000000000000001
.................ACACCGACAACAGCTGCAGCCAA................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000010000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................T--GTATTGAAA----TGTTTTGCAGC...2111.001000000000000000000000000000000000000000000000000000000000000100
................AACACCGACAACAGCTGCAGCCA.................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000100000000000000000000000000
..........TGCAGCAACACCGACAACAGCT........................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000100000000000000000000000000000000
..............GCAACACCGACAACAGCTGC......................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000010000000000000000000000000000
................AACACCGACAACAGCTGCAG....................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.................ACACCGACAACAGCTGCAGCCA.................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000001000000000000000000000000000
......CTCTTGCAGCAACACCGAC...............................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000001000000000000000000000000000000000
...................................GCCAAAGT--CAATCAGGTGAGT----GT------------------------TGAAT...........................................................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
......CTCTTGCAGCAACACCGA................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000001000000000000000000000000000000
.............................GCTGCAGCCAAAGT--CAATCAGAC..................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000010000000000000000000000000000000
................AACACCGACAACAGCTGCA.....................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000100000000000000000000000000000000000000000000000
..................CACCGACAACAGCTGCAGCCAAA...............................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000001000000000000000000000000000
...............CAACACCGACAACAGCTGCA.....................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000100
..ATGTCTCTTGCAGCAACACCGAC...............................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
................AACACCGACAACAGCTGCAGCC..................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000010000000000000000000000000000000000000000
.AATGTCTCTTGCAGCAACACCGA................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000001000000000000000000000000000000000
..........................ACAGCTGCAGCCAAAGT--CAATCAGAC..................................................................................................................................................................................................................................................................................................................................................................................2611.001010000000000000000000000000000000000000000000000000000000000000
......CTCTTGCAGCAACACCGACA..............................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000001000000000000000000000000000000000000000000
CAATGTCTCTTGCAGCAACACC..................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
.....TCTCTTGCAGCAACACCGACAACAGCT........................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000100000000000000000000000000000000000
........CTTGCAGCAACACCGACAACAGCT........................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
...........GCAGCAACACCGACAACAGCT........................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.AATGTCTCTTGCAGCAACACC..................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
...............................TGCAGCCAAAGT--CAATCAGAC..................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.................................CAGCCAAAGT--CAATCAGA...................................................................................................................................................................................................................................................................................................................................................................................1820.501001000000000000000000000000000000000000000000000000000000000000
................................GCAGCCAAAGT--CAATCAGAC..................................................................................................................................................................................................................................................................................................................................................................................2030.331000000000000000001000000000000000000000000000000000000000000000
...........................CAGCTGCAGCCAAAGT--CAA........................................................................................................................................................................................................................................................................................................................................................................................1930.331000000000000000000010000000000000000000000000000000000000000000
droMoj3
CAATGTCTCTTGCAGCAACACGGACAACAGCTGCAGCCAAAGT--CAATCAGGTGAGT----GT------------------------TGAATTTCAAGTTTTTTTTTCTT------GCTACTTTTTCAACTCCATTTC--------TACA---------------------------------ACTCTTTCGCTCT--------TA-----------------------------CGCTCTT---TGGCTTTCCCTTTGAAG--------------------------------------------------------------------CGCAAAATGCGGCTGTGCGGCCACT----------------------GGGCT--A--AGTGTGT--GCATTGAAAT-TTTATTTTGCAG---CSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......TCTTGCAGCAACACGGACAACA...........................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
......CTCTTGCAGCAACACGGACAACAGCTG.......................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
...TGTCTCTTGCAGCAACACGGACA..............................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
...................ACGGACAACAGCTGCAGCCA.................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
......CTCTTGCAGCAACACGGAC...............................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
....GTCTCTTGCAGCAACACGGACAACA...........................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.AATGTCTCTTGCAGCAACAC...................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..................CACGGACAACAGCTGCAGCC..................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
................AACACGGACAACAGCTGCAGCC..................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
........................CAACAGCTGCAGCCAAAGT--CAATCAGAC..................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
......CTCTTGCAGCAACACGGACAAC............................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000
........CTTGCAGCAACACGGACAACAGCT........................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
......CTCTTGCAGCAACACGGACAACAGCTGC......................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
......CTCTTGCAGCAACACGGACAACAGCT........................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
..................................AGCCAAAGT--CAATCAGGTGAGT----GT------------------------................................................................................................................................................................................................................................................................................................................................................2411.001000001
........................CAACAGCTGCAGCCAAAGT--CAATCA.....................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.........................AACAGCTGCAGCCAAAGT--...........................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
........CTTGCAGCAACACGGACAACA...........................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
droGri2
CAATGTCTCCTGCAGCAACACCGACAACAGCTGCAGCCAAAGT--CAATCAGGTGAGT----GT------------------------TGAATTTCAAGTTTTTTCTTCTT------TTTTTTCTTAT----ATTTTCTTACTCC--------------------------TTTGGCTCTCCACACTCTTTCGCGCGCCTTCTCTCT-----------------------------CGCTCTCTTATGGCTTTCCCTTG---------------------------------------------------TCCATTTGATTTCAATGCATTCGCA----TCGACTGTTGCTCCACT-------------------------------------GT--GCATTCAAACTTTTATTTTGCAGCTGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
CGGCGTTTCCTGCAGCAATACGGACAACAGCTGCAGTCAGAGT--CAATCAGGTGAGT----GTGTATGTGTGTTTAAGTGAATGTGTTGAATATCAAGTTTA-------T------CCTAC--------------------------------------------------------------ACTCTTTCTCTCT--------GTCTCTCTCTATCTCTTATTGTGTGTGCTCTCTTG-------------------------------------------------------TTGATTTTTAGTTTCTTAAT-----T---------------------TTA---------------AA------G--CT--GTACAAAAGTCAAT--TTGTTTGGA------A-AGTTCTCGGCAGCTGCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................AATACGGACAACAGCTGCAGTCAGA...............................................................................................................................................................................................................................................................................................................................................................................................2514.00420110
................AATACGGACAACAGCTGC......................................................................................................................................................................................................................................................................................................................................................................................................1814.00440000
.................ATACGGACAACAGCTGCAGTCAGAGT--...........................................................................................................................................................................................................................................................................................................................................................................................2614.00440000
.................ATACGGACAACAGCTGCAGTCAGA...............................................................................................................................................................................................................................................................................................................................................................................................2413.00310002
.............AGCAATACGGACAACAGCTGC......................................................................................................................................................................................................................................................................................................................................................................................................2113.00310110
...................ACGGACAACAGCTGCAGTCAGA...............................................................................................................................................................................................................................................................................................................................................................................................2213.00330000
...............CAATACGGACAACAGCTGC......................................................................................................................................................................................................................................................................................................................................................................................................1913.00300030
.............AGCAATACGGACAACAGCT........................................................................................................................................................................................................................................................................................................................................................................................................1912.00210100
................AATACGGACAACAGCTGCAGTC..................................................................................................................................................................................................................................................................................................................................................................................................2212.00210010
................................GCAGTCAGAGT--CAATCAGAC..................................................................................................................................................................................................................................................................................................................................................................................2012.00200110
.................ATACGGACAACAGCTGCAGT...................................................................................................................................................................................................................................................................................................................................................................................................2012.00200011
........................CAACAGCTGCAGTCAGAGT--...........................................................................................................................................................................................................................................................................................................................................................................................1912.00200020
..................TACGGACAACAGCTGCAGTCAGAGT--C..........................................................................................................................................................................................................................................................................................................................................................................................2612.00220000
................AATACGGACAACAGCTGCAGT...................................................................................................................................................................................................................................................................................................................................................................................................2112.00200200
................AATACGGACAACAGCTGCAGTCAGAGT--...........................................................................................................................................................................................................................................................................................................................................................................................2712.00201010
..............GCAATACGGACAACAGCTGCAGT...................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
.................ATACGGACAACAGCTGCAGTC..................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000
................AATACGGACAACAGCTGCAGTCAGAGT--CA.........................................................................................................................................................................................................................................................................................................................................................................................2911.00100100
.................ATACGGACAACAGCTGCA.....................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
................AATACGGACAACAGCTGCAG....................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
.......................ACAACAGCTGCAGTCAGAGT--...........................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
.........CTGCAGCAATACGGACAACAGCT........................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
.........................AACAGCTGCAGTCAGAGT--CAAT.......................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
...............CAATACGGACAACAGCTGCAGTCAGA...............................................................................................................................................................................................................................................................................................................................................................................................2611.00100100
.........................AACAGCTGCAGTCAGAGT--C..........................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
.................ATACGGACAACAGCTGCAG....................................................................................................................................................................................................................................................................................................................................................................................................1911.00100001
..............GCAATACGGACAACAGCT........................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
.................ATACGGACAACAGCTGCAGTCAGAGT--C..........................................................................................................................................................................................................................................................................................................................................................................................2711.00110000
...........................CAGCTGCAGTCAGAGT--CAATC......................................................................................................................................................................................................................................................................................................................................................................................2111.00110000
.................ATACGGACAACAGCTGCAGTCAG................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000
.............AGCAATACGGACAACAGCTGCA.....................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
..........................ACAGCTGCAGTCAGAGT--CAATCA.....................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
................AATACGGACAACAGCTGCA.....................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
..............................CTGCAGTCAGAGT--CAATCA.....................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
.........................AACAGCTGCAGTCAGAGT--...........................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
..............GCAATACGGACAACAGCC........................................................................................................................................................................................................................................................................................................................................................................................................1820.50110000
dp5
CAACAACACCAACAGCAACATTTACCGCAGCAGCATTTAATTC--GGGCGATACCTGT----AT----------------------CAAGGTG----AGT-----------CGTGATCTCCC--------------------------------------------------------------ACTCTCCCACTCT--------CTCTCCCTCTCTCTCTCCTCGTTCTCTCTCTCTCTCTC---TCTCTCTCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............AGCAACATTTACCGCAGCAGC......................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010000000
droPer2
CAGCGA--CCGACAGAAGCTCCAACAACAT--TCAGTCGGCGC--GAGTCGAGCGAGCGAGCCC--------------------------CATTCAGAG-------------------------------CCCCATT------------------------------CGCCG------------ATTGCTTTGCTCA---TTTCTGTCTGCCTTTTAC----------------------------------------------------------------------------------------A---------------------------------------------------------------CCTGC--ATGTGC--GTGT--GCGTGTGCG------T-GTGCC---------TTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................................................................................................................................................................................TTAC----------------------------------------------------------------------------------------A---------------------------------------------------------------CCTGC--ATGTGC--GT.....................................1811.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................ATGTGC--GTGT--GCGTGTGCG------T-................20100.101000100
............................................................................................................................................................................................................................................................................................................................................................................................TGC--GTGT--GCGTGTGCG------T-G...............18200.051000100
droAna3
CAGT------TGCAACAACACCAGCAGCAACAGCAACCGCAATTTCAACCCAGCTATG-A--GT------------------------CGCAGTTCCAGC-----------CACAAT--------------------------------------------------CTAC---------------------------------------------------------------------------------------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------CSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................ACCGCAATTTCAACCCAGCT.................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
........................................AATTTCAACCCAGCTATG-A--GT------------------------................................................................................................................................................................................................................................................................................................................................................2111.001010000
..............ACAACACCAGCAGCAACAG.......................................................................................................................................................................................................................................................................................................................................................................................................1950.201010000
droBip1
TGGCGTTTCCTGCAGCAACACGGATAACAGCTGCAGGCAGAGT--CAGTCAGGTGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
CGGCGTTTCCTGCAGCAACACGGACAACAGCTGCAG------T--CAGTCAGGTGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CGGCATTTCCTGCAGCAACACGGACAACAGCTGCAGCCAGAGT--CAGTCAGGTGAGC----AC------------------------TTAACT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
CGGCATTTCCTGCAGCAACACGGACAACAGCTGCAGCCAGAGT--CAGTCAGGTGAGC----AC------------------------TTAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CAG---------CAACAATGCCAAGAACAACAGCAACCAAGTC--GAGTTTCTTGAAA----TA------------------------TTTATT-------------TTAT------ATTACGCTTTTCGTTTTA-----------------------------------------------------------------TTTTTATTTCCCTTTTTC----------------------------------------------------------------------------------------TC-------------------------------------------------------------------------------------------------------------------TSizeHit CountTotal NormTotal
No Reads
droBia1
TGGCATTTCCTGCAGCAACACGGACAACAGCTGCAGCCAGAGT--CAGTCAGGTGAGC----AC------------------------TGGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
CGGCATTTCCTGCAGCAACACGGACAACAGCTGCAGCCAGAGT--CAGTCAGGTGAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
CCCACC-----------------------------------------------------------------------------------------------------TTAT------CTTCCTCTTCC----CCACTCCCACTCTTTCGTCGCCGTTACTCTCTATTTACCAAAAGCTCTTCATGTGCGACCGCATGTTGTTTCTCC----------------------------------------------------------------------------------------TTCCCTTTTCCTTTGCTTAT-----------------------------------------------ATTATATGTATGTACATAC----ATAT--GTATTTGAA------TTGAA-----------ATSizeHit CountTotal NormTotal
No Reads
dm3
CGGCATTTCCTGCAGCAACACGGACAACAGCTGCAGCCAGAGT--CAGTCAGGTGAGC----AA----------------------TTTGAGTTTCTAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................AGCTGCAGCCAGAGT--CAGTCAGAC..................................................................................................................................................................................................................................................................................................................................................................................2418.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................ACACGGACAACAGCTGCAGCC..................................................................................................................................................................................................................................................................................................................................................................................................2117.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000
...............CAACACGGACAACAGCTGC......................................................................................................................................................................................................................................................................................................................................................................................................1916.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000002000000000000000000100000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
........................CAACAGCTGCAGCCAGAGT--CA.........................................................................................................................................................................................................................................................................................................................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000002000000000100
.................ACACGGACAACAGCTGCAGCCAGAGT--...........................................................................................................................................................................................................................................................................................................................................................................................2616.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000400100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............AGCAACACGGACAACAGCTGC......................................................................................................................................................................................................................................................................................................................................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000100000000000000000000110000000000000000000000000000
.......................ACAACAGCTGCAGCCAGAGT--C..........................................................................................................................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000001020
......TTCCTGCAGCAACACGGACAACAGC.........................................................................................................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............GCAACACGGACAACAGCTGC......................................................................................................................................................................................................................................................................................................................................................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000010000000000
.......TCCTGCAGCAACACGGACAACAGCT........................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000000
....................CGGACAACAGCTGCAGCC..................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................ACAGCTGCAGCCAGAGT--CAGTCAGA...................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
..............GCAACACGGACAACAGCTGCAGCCAG................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GACAACAGCTGCAGCCAGAGT--...........................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000020000000000000000000000000000
............................AGCTGCAGCCAGAGT--CAGTC......................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................AACACGGACAACAGCTGCAGCCAGAG..............................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................AGCTGCAGCCAGAGT--CAGTCA.....................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................ACACGGACAACAGCTGCA.....................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................ACAGCTGCAGCCAGAGT--CAGTC......................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..GCATTTCCTGCAGCAACACGG.................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
................AACACGGACAACAGCTGCAGCC..................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.............AGCAACACGGACAACAGCTGCAGC...................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000
.....................GGACAACAGCTGCAGCCA.................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........TGCAGCAACACGGACAACA...........................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GCATTTCCTGCAGCAACACGGA................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
.........................AACAGCTGCAGCCAGAGT--CAGTC......................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
................................GCAGCCAGAGT--CAGTCAG....................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
.....TTTCCTGCAGCAACACGGACAACAGC.........................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............GCAACACGGACAACAGCT........................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................CAGCTGCAGCCAGAGT--CAGT.......................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000001000000
....................CGGACAACAGCTGCAGCCAG................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................AACACGGACAACAGCTGC......................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000
......................GACAACAGCTGCAGCCAGAGT--CAGTC......................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TGCAGCCAGAGT--CAGTCAGA...................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000
............CAGCAACACGGACAACAGCT........................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............AGCAACACGGACAACAGCTGCA.....................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
................................GCAGCCAGAGT--CAGTCAGGTGAGC----AA----------------------..................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CATTTCCTGCAGCAACACGGACAACAGC.........................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TTTCCTGCAGCAACACGGACA..............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TGCAGCAACACGGACAAC............................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CAGCAACACGGACAACAGCTG.......................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............GCAACACGGACAACAGCTGCA.....................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.........................AACAGCTGCAGCCAGAGT--CAGTCAGAC..................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................AGT--CAGTCAGGTGAGC----AA----------------------TTT...............................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....ATTTCCTGCAGCAACACGGACAACAGCT........................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............AGCAACACGGACAACAGCTGCAGCCAGA...............................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CAGCAACACGGACAACAGCTGCAGCC..................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GCAGCAACACGGACAACAGC.........................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GGCATTTCCTGCAGCAACACGGACA..............................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................CAGCTGCAGCCAGAGT--CAGTC......................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
...CATTTCCTGCAGCAACACG..................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............CAGCAACACGGACAACAGCTGCAGCCAG................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TGCAGCAACACGGACAACAGCTC.......................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GCAGCCAGAGT--CAGTCAGGTGAGC----A.........................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CAACAGCTGCAGCCAGAGT--CAGTC......................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................GCCAGAGT--CAGTCAGGTG.................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.GGCATTTCCTGCAGCAACACGGACAACAGCTGC......................................................................................................................................................................................................................................................................................................................................................................................................3311.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................GCTGCAGCCAGAGT--CAGTCAGAC..................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................GACAACAGCTGCAGCCAGAGT--CAGTCAGAC..................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................GCTGCAGCCAGAGT--CAGTCAGA...................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CATTTCCTGCAGCAACACGG.................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..GCATTTCCTGCAGCAACACGGT................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CAACAGCTGCAGCCAGAGT--CAGTCA.....................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
................AACACGGACAACAGCTGCAGCCAGA...............................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GGCATTTCCTGCAGCAACACG..................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....TTTCCTGCAGCAACACGGACAA.............................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CACGGACAACAGCTGCAGCCA.................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
................AACACGGACAACAGCTGCAGCCAGAGT--...........................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........CCTGCAGCAACACGGACAACAGCTGC......................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................CACGGACAACAGCTGCAGCCAA................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GGCATTTCCTGCAGCAACACGGACAAC............................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................ACACGGACAACAGCTGCAGCCAGAGT--CAGT.......................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GGACAACAGCTGCAGCCAGAGT--CAGTCA.....................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TCCTGCAGCAACACGGACAACAGCTGC......................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CAACAGCTGCAGCCAGAGT--CAGT.......................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
.......................ACAACAGCTGCAGCCAGAGT--CAGTCA.....................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................ACACGGACAACAGCTGCAGCCAGAGT--C..........................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...................................GCCAGAGT--CAGTCAGGTGAGC----..........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..............GCAACACGGACAACAGCTGCAGCCA.................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................ACAGCTGCAGCCAGAGT--CA.........................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...............CAACACGGACAACAGCTGCAG....................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GGACAACAGCTGCAGCCAGAGT--CAGTC......................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................ACGGACAACAGCTGCAGCCA.................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TGCAGCAACACGGACAACAGCTGC......................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.GGCATTTCCTGCAGCAACACGGAC...............................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................AACACGGACAACAGCTGCAGC...................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............AGCAACACGGACAACAGCT........................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................CAGCCAGAGT--CAGTCAGGTGAGC----..........................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
..........TGCAGCAACACGGACAACAG..........................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
...............CAACACGGACAACAGCTGCAGCCAGA...............................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..............GCAACACGGACAACAGCTGCAGCC..................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TGCAGCCAGAGT--CAGTCAGAC..................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GGCATTTCCTGCAGCAACAC...................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......TTCCTGCAGCAACACGGACAACAGCT........................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...........................CAGCTGCAGCCAGAGT--CAGTCAGAC..................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............AGCAACACGGACAACAGCTGCAGCC..................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................AGTCAGGTGAGC----AA----------------------TTTGAG............................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.................ACACGGACAACAGCTGCAGC...................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............AGCAACACGGACAACAGCTGCAGCCA.................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................GTGAGC----AA----------------------TTTGAGTTTCTAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
..............................................AGTCAGGTGAGC----AA----------------------TTTGAGT...........................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
...................ACGGACAACAGCTGCAGCCAGAGT--CAGT.......................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CGGACAACAGCTGCAGCCAGAGT--...........................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GCAGCAACACGGACAACAGCT........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...................ACGGACAACAGCTGCAGCCAGAG..............................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............GCAACACGGACAACAGCTGCAGCCAGA...............................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............AGCAACACGGACAACAGC.........................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................AGCCAGAGT--CAGTCAGAC..................................................................................................................................................................................................................................................................................................................................................................................1880.6350000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000
................................GCAGCCAGAGT--CAGTCAGAC..................................................................................................................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................CAGCCAGAGT--CAGTCAGA...................................................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.................................CAGCCAGAGT--CAGTCAGTGT.................................................................................................................................................................................................................................................................................................................................................................................20130.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CGGCATTTCCTGCAGCAACACGGACAACAGCTGCAGCCAGAGT--CAGTCAGGTGAGC----AC----------------------TTTGAGTTCCTAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.GGCATTTCCTGCAGCAACACGGAC...............................................................................................................................................................................................................................................................................................................................................................................................................2414.00402200000000000000
.................ACACGGACAACAGCTGCAGCC..................................................................................................................................................................................................................................................................................................................................................................................................2112.00220000000000000000
...................ACGGACAACAGCTGCAGCC..................................................................................................................................................................................................................................................................................................................................................................................................1912.00200200000000000000
..............GCAACACGGACAACAGCTGCAGCCAGA...............................................................................................................................................................................................................................................................................................................................................................................................2712.00200000000000020000
.....TTTCCTGCAGCAACACGGACAAC............................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
......................................AGAGT--CAGTCAGGTGAGC----AC----------------------T.................................................................................................................................................................................................................................................................................................................................................2111.00100000100000000000
...............CAACACGGACAACAGCTGCAGCC..................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000000000
...........................CAGCTGCAGCCAGAGT--CAGTCAGAC..................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000000000
.......................ACAACAGCTGCAGCCAGAGT--CAGTC......................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000001000000
...............CAACACGGACAACAGCTGCAGC...................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
.............................................CAGTCAGGTGAGC----AC----------------------TTTGA.............................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
.......................ACAACAGCTGCAGCCAGAGT--...........................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
...............CAACACGGACAACAGCTGCAGCCAGA...............................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000000000
..............GCAACACGGACAACAGCT........................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
droSec2
ATTATTATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTAGTTTT----------------------------------------------------------------------------------------------------------TACGTT---------------------------------GTT---------------ACATTGTGAGGCTAC--ACACAC--AATT--CTGTTTACA------T-CATGTTTAGAAGCAAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................................................................................................................................................................................................................................................................................GTT---------------------------------GTT---------------ACATTGTGAGGCTAC--...............................................2111.0010100
.........................................................................................................................................................................................................................................................................................................................................................................................................GTTTACA------T-CATGTTTAGAAGCAAG2411.0010100
droYak3
CGGCATTTCCTGCAGCAACACGGACAACAGCTGCAGCCAGAGT--CAGTCAGGTGAGC----AC----------------------TTTGAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................CAACAGCTGCAGCCAGAGT--CA.........................................................................................................................................................................................................................................................................................................................................................................................2112.00201000010000
.GGCATTTCCTGCAGCAACACGGAC...............................................................................................................................................................................................................................................................................................................................................................................................................2412.00201100000000
............................AGCTGCAGCCAGAGT--CAGTC......................................................................................................................................................................................................................................................................................................................................................................................2012.00200000110000
...................ACGGACAACAGCTGCAGCC..................................................................................................................................................................................................................................................................................................................................................................................................1912.00220000000000
....ATTTCCTGCAGCAACACGGAC...............................................................................................................................................................................................................................................................................................................................................................................................................2112.00202000000000
............CAGCAACACGGACAACAGCTGC......................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.........................AACAGCTGCAGCCAGAGT--CAGTC......................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
.................ACACGGACAACAGCTGCAGCC..................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000
.............................GCTGCAGCCAGAGT--CAGTC......................................................................................................................................................................................................................................................................................................................................................................................1911.00100000100000
..........................ACAGCTGCAGCCAGAGT--CA.........................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
.........................AACAGCTGCAGCCAGAGT--CA.........................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
...............................TGCAGCCAGAGT--CAGTCAGAC..................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
..............GCAACACGGACAACAGCTGCA.....................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.GGCATTTCCTGCAGCAACACG..................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.............AGCAACACGGACAACAGCTGCA.....................................................................................................................................................................................................................................................................................................................................................................................................2211.00100001000000
....................CGGACAACAGCTGCAGCCAGAGT--CA.........................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
...............CAACACGGACAACAGCTGC......................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
.GGCATTTCCTGCAGCAACACGGA................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
......................GACAACAGCTGCAGCCAGAGT--CAGT.......................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
......................GACAACAGCTGCAGCCAGAGT--CA.........................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
.........................AACAGCTGCAGCCAGAGT--CAGT.......................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
........................CAACAGCTGCAGCCAGAGT--C..........................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
..............GCAACACGGACAACAGCTGC......................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
...............CAACACGGACAACAGCTGCAGCCAGA...............................................................................................................................................................................................................................................................................................................................................................................................2611.00110000000000
............................AGCTGCAGCCAGAGT--CAGTCA.....................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
droEre2
CGGCATTTCGTGCAGCAACACGGACAACAGCTGCAGCCAGAGT--CAATCAGGTGAGC----AC----------------------TTTGAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............GCAACACGGACAACAGCTGC......................................................................................................................................................................................................................................................................................................................................................................................................2013.0030200010
......................GACAACAGCTGCAGCCAGA...............................................................................................................................................................................................................................................................................................................................................................................................1912.0021000010
......................GACAACAGCTGCAGCCAGAGT--...........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
...........GCAGCAACACGGACAACAGC.........................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
....ATTTCGTGCAGCAACACG..................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
.........................AACAGCTGCAGCCAGAGT--CAATCAGAC..................................................................................................................................................................................................................................................................................................................................................................................2711.0010000010
....ATTTCGTGCAGCAACACGGAC...............................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
..........................ACAGCTGCAGCCAGAGT--CAATCA.....................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
.GGCATTTCGTGCAGCAACACGGA................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
..................CACGGACAACAGCTGCAGCC..................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
.GGCATTTCGTGCAGCAACACGGAC...............................................................................................................................................................................................................................................................................................................................................................................................................2411.0010001000
................AACACGGACAACAGCTGCAGCCAGAGT--...........................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
.............AGCAACACGGACAACAGCT........................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
..............GCAACACGGACAACAGCTGCAGCCAGA...............................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
..GCATTTCGTGCAGCAACACGGAC...............................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
.............AGCAACACGGACAACAGCTGCAGC...................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
........................CAACAGCTGCAGCCAGAGT--...........................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010

Generated: 05/19/2015 at 12:37 PM