ID:

dvi_405

 Coordinate:

scaffold_12100:221995-222047 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

No conservation details.

-16.8 -16.4

Flybase annnotation

intergenic

No Repeatable elements found

mature
  1. scaffold_12100:209222-209243 -
  2. scaffold_12100:216591-216612 -
  3. dvi_405  scaffold_12100:222026-222047 -
  4. scaffold_13047:545876-545897 -
star
  1. scaffold_12100:123428-123451 -
  2. scaffold_12100:216562-216585 -
  3. dvi_405  scaffold_12100:221997-222020 -

Sense Strand Reads

TGAAGCTAAGCTGAAGCATAAGCTGTAGCTTCAATCCAAAGAGAGATGGCAAGGACAGAATTTGTGGTGTGCTTTATTCATTGTCGAAACGTTTGTTCTGACTCTTTTTGTTGTTGGTTTATATGGAAAATATTGGCATTGAATTTTTGGCAT
***********************************.(((((((((......((((((((.(((((((((.........))))).))))...))))))))..)))))))))......************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR060676
9xArg_ovaries_total
 M047
female body
 SRR060677
Argx9_ovaries_total
 SRR060675
140x9_ovaries_total
 SRR060678
9x140_testes_total
 SRR060673
9_ovaries_total
 SRR060654
160x9_ovaries_total
 SRR060688
160_ovaries_total
 SRR060656
9x160_ovaries_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060679
140x9_testes_total
 SRR060674
9x140_ovaries_total
 SRR060655
9x160_testes_total
 SRR060683
160_testes_total
 M027
male body		 SRR060670
9_testes_total
 SRR060657
140_testes_total
 SRR060687
9_0-2h_embryos_total
 SRR060663
160_0-2h_embryos_total
 SRR060689
160x9_testes_total
 V116
male body		 SRR060682
9x140_0-2h_embryos_total
 SRR060662
9x160_0-2h_embryos_total
 SRR060680
 9xArg_testes_total
 V047
embryo
 SRR060658
140_ovaries_total
 SRR060659
Argentina_testes_total
 GSM1528803
follicle cells		 M028
head
 SRR060661
160x9_0-2h_embryos_total
 V053
head
 SRR060668
160x9_males_carcasses_total
 SRR1106729
mixed whole adult body
 SRR060669
160x9_females_carcasses_total
..................................................AAGGACAGAATTTGTGGTGTGC................................................................................. 22 0 4 12.25 49 3 1 2 0 2 8 0 3 5 6 1 1 2 1 2 0 0 3 0 3 0 1 0 1 1 2 0 1 0 0 0 0 0 0 0
.............................................................................TCATTGTCGAAACGTTTGTTCTGA.................................................... 24 0 3 4.67 14 0 1 1 4 1 1 0 1 0 0 0 1 2 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................TCATTGTCGAAACGTTTGTTCTGAC................................................... 25 0 3 3.67 11 1 7 1 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TCATTGTCGAAACGTTTGTTCTG..................................................... 23 0 3 3.00 9 0 3 1 0 1 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................GCTTTATTCATTGTCGAAACGTTTG.......................................................... 25 0 3 2.67 8 3 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AAGGACAGAATTTGTGGTGTG.................................................................................. 21 0 5 2.60 13 3 1 1 1 0 0 3 0 0 0 0 1 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................AAGGACAGAATTTGTGGTGTGCTTTA............................................................................. 26 0 2 2.50 5 1 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................TCATTGTCGAAACGTTTGTTCTGACT.................................................. 26 0 3 2.33 7 0 1 1 2 0 0 0 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AAGGACAGAATTTGTGGTGTGCTTT.............................................................................. 25 0 3 2.33 7 0 1 2 1 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TGTTGGTTAATATGGAAAATATTGGCAT.............. 28 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AAGGACAGAATTTGTGGTGTGCTTTAT............................................................................ 27 0 2 2.00 4 1 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................TTCATTGTCGAAACGTTTGTTCTGA.................................................... 25 0 3 1.67 5 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AAGGACAGAATTTGTGGTGT................................................................................... 20 0 6 1.50 9 0 1 1 0 0 3 0 0 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................TCATTGTCGAAACGTTTGTTCTGACTC................................................. 27 0 3 1.33 4 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.............................................ATGGCAAGGACAGAATTTGTGGT..................................................................................... 23 0 3 1.33 4 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................ATGGCAAGGACAGAATTTGTGGTGTGC................................................................................. 27 0 3 1.33 4 1 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AAGGACAGAATTTGTGGTGTGCTT............................................................................... 24 0 3 1.33 4 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................GCTTTATTCATTGTCGAAACGTTT........................................................... 24 0 3 1.33 4 1 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................ATGGCAAGGACAGAATTTGTGG...................................................................................... 22 0 3 1.33 4 0 0 0 0 1 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................ATGGCAAGGACAGAATTTGTGGTGT................................................................................... 25 0 3 1.33 4 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0
..................................................AAGGACAGAATTTGTGGTG.................................................................................... 19 0 6 1.17 7 0 1 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......TAAGCTGAAGCATAAGCTGTAGCTTCAA....................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................TTTATATGGAAAATATTGGCATTGAATC........ 28 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AAGGACAGAATTTGTGGTGTGCT................................................................................ 23 0 3 1.00 3 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......TAAGCTGAAGCATAAGCTGTAGC............................................................................................................................ 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................ATGGCAAGGACAGAATTTGTG....................................................................................... 21 0 3 0.67 2 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................GCTTTATTCATTGTCGAAACGTTTGT......................................................... 26 0 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................ATGGCAAGGACAGAATTTGTGGTG.................................................................................... 24 0 3 0.67 2 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................ATTCATTGTCGAAACGTTTGTTCTGA.................................................... 26 0 3 0.67 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................ATGGCAAGGACAGAATTTGTGGTTC................................................................................... 25 2 3 0.67 2 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AAGGACAGAATTTGTGGTGTGCCT............................................................................... 24 1 4 0.50 2 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TGTTCTGACTCTTTTTGTTGT....................................... 21 0 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................AGCTGTAGCTTCAATCCAAAGCGAG............................................................................................................ 25 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AAGGACAGAATTTGTGGTGTGCTTTATC........................................................................... 28 1 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................TTGGCATTGAATTTTTGG... 18 0 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................TAGCTTCAATCCAAAGAGAGATGGC....................................................................................................... 25 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................TCCAAAGAGAGATGGCAAGGACAGAAT............................................................................................ 27 0 5 0.40 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................TCAATCCAAAGAGAGATGGCAAGG................................................................................................... 24 0 5 0.40 2 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................GTGTGCTTTATTCATTGTCGAAACGTT............................................................ 27 0 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.....................................................................TGCTTTATTCATTGTCGAAACGTTT........................................................... 25 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TTTTTGTTGTTGGTTAATATGGAAAAT...................... 27 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AAGGACAGAATTTGTGGTGTGCTTA.............................................................................. 25 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................TGTGCTTTATTCATTGTCGAAACGTTTG.......................................................... 28 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................GCTTTATTCATTGTCGAA................................................................. 18 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................ATTGTCGAAACGTTTGTTCTGACTCT................................................ 26 0 3 0.33 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................GCTTTATTCATTGTCGTACCGTT............................................................ 23 2 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................GCTTTATTCATTGTCGAAACGTTTGTT........................................................ 27 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................TCGAAACGTTTGTTCTGACTCTTT.............................................. 24 0 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................GTGTGCTTTATTCATTGTCGAAACGT............................................................. 26 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TCATTGTCGAAACGTTTTTTCTGACC.................................................. 26 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TCATTGTCGAAACGTTTGTTCTGATTTT................................................ 28 2 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................ATGGCAAGGACAGAATTTGTGGTGTG.................................................................................. 26 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................ATTGTCGAAACGTTTGTTCTGAA................................................... 23 1 3 0.33 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TCATTGTCGAAACGTTTGTTCTGACC.................................................. 26 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................GCTTTATTCATTGTCGAAACGT............................................................. 22 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................ATGGTAAGGACAGAATTTGTGGTGT................................................................................... 25 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................ATGGCAAGGACTGACTTTGTGG...................................................................................... 22 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
............................................................................TTCATTGTCGAAACGTTTGTTCTCCC................................................... 26 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................CATTGTCGAAACGTTTGTTCTGAC................................................... 24 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................GCTTTATTCATTGTCGAAACGTT............................................................ 23 0 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................TTCATTGTCGAAACGTTTGTTCTGAC................................................... 26 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................ATGGCAAGGACAGAATTTGTGGTGTC.................................................................................. 26 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................GCTTTATTCATTGTCGGAACTTTTGT......................................................... 26 2 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................GCTTTATTCATTGTCGAAACG.............................................................. 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................TATTGTCGAAACGTTTGTTCTGAC................................................... 24 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................GAGATGGCAAGGACAGAATTTGTGGT..................................................................................... 26 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................GCTTTATTCATTGTCGAAA................................................................ 19 0 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................CAAGGACAGAATTTGTGGTGTGC................................................................................. 23 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................GCTTTATTCATTGTCGAAACGTTTGTG........................................................ 27 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TCATTGTTGAAACGTTTGTTCTGA.................................................... 24 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................TTCAATCCAAAGAGAGATGGC....................................................................................................... 21 0 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................GCTTTATTCATTGTCGCAACGTTTGTCCC...................................................... 29 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.............................................ATTGCAAGGACAGAATTTGTGGTGTG.................................................................................. 26 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................ATGGCAAGGACAGAATTTGTTGT..................................................................................... 23 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................AAGGACAGAATTTGTGGTGTGCC................................................................................ 23 1 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................GAGAGATGGCAAGGACAGAATTTGT........................................................................................ 25 0 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................AGAGAGATGGCAAGGACAGAATTTGT........................................................................................ 26 0 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..................................TCCAAAGAGAGATGGCAAGTACAGAAAT........................................................................................... 28 2 5 0.20 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AAGGACAGAATTTGTGGTGTGCTTCCC............................................................................ 27 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................CAAAGAGAGATGGCAAGGACAGA.............................................................................................. 23 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................CAAAGAGAGATGGCAAGGACAGAATA........................................................................................... 26 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................TTTATTCAGTGTCGAAAC............................................................... 18 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
..............................TCAATCCAAAGAGAGATGGCAAGGACA................................................................................................ 27 0 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................TCCAAAGAGAGATGGCAAGGACAG............................................................................................... 24 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................CAAAGAGAGATGGCAAGGACAGAAT............................................................................................ 25 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AAGGACAGAATTTGTGGTGTC.................................................................................. 21 1 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AAGGACAGAATTTGTGTTGTGC................................................................................. 22 1 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................ACGGACAGAATTTGTGGTGT................................................................................... 20 1 7 0.14 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................GTTTATATGGAAAATTTTGACT............... 22 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.................................................................................................................................ATATTGGCCTTGAATCTT...... 18 2 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................GAATATATTAGCATTGAAT......... 19 2 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
...........................................................................................................................TCGAATATATTAGCATTGAAT......... 21 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..................................................AAGGACAGAATTTGTGGTCTG.................................................................................. 21 1 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AAGGACAGAATTTGTGGTC.................................................................................... 19 1 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................CAAGGACAGAATTTGTGG...................................................................................... 18 0 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AAGGACAGAATTTGTGGT..................................................................................... 18 0 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................AGAGGGATGGCAAAGCCAGA.............................................................................................. 20 3 17 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AAGGACAGAATTTGTGGTTAA.................................................................................. 21 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................AAGGACAGAATTTGAGGAGC................................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

ACTTCGATTCGACTTCGTATTCGACATCGAAGTTAGGTTTCTCTCTACCGTTCCTGTCTTAAACACCACACGAAATAAGTAACAGCTTTGCAAACAAGACTGAGAAAAACAACAACCAAATATACCTTTTATAACCGTAACTTAAAAACCGTA
*************************************.(((((((((......((((((((.(((((((((.........))))).))))...))))))))..)))))))))......*********************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060676
9xArg_ovaries_total
 SRR060677
Argx9_ovaries_total
 SRR060675
140x9_ovaries_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060674
9x140_ovaries_total
 SRR060678
9x140_testes_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060679
140x9_testes_total
 SRR060688
160_ovaries_total
 SRR060687
9_0-2h_embryos_total
 SRR060654
160x9_ovaries_total
 M061
embryo
 SRR060673
9_ovaries_total
 SRR060656
9x160_ovaries_total
 SRR060658
140_ovaries_total
 SRR060681
Argx9_testes_total
 SRR060689
160x9_testes_total
 SRR060662
9x160_0-2h_embryos_total
 M027
male body		 SRR060683
160_testes_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060680
 9xArg_testes_total
 SRR060655
9x160_testes_total
 SRR060663
160_0-2h_embryos_total
 V047
embryo
 SRR060665
9_females_carcasses_total
 GSM1528803
follicle cells		 SRR060660
Argentina_ovaries_total
 V116
male body		 SRR060659
Argentina_testes_total
 SRR1106714
embryo_2-4h
 SRR1106715
embryo_4-6h
 SRR1106730
embryo_16-30h
.................................TAGGTTTCTCTCTACCGTTCCTGTCTT............................................................................................. 27 0 5 36.00 180 33 26 26 20 12 17 6 1 9 15 0 2 3 2 0 0 1 2 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
...................................GGTTTCTCTCTACCGTTCCTGTCTT............................................................................................. 25 0 5 19.80 99 27 13 11 7 11 2 1 1 3 3 3 4 2 2 1 2 0 0 0 2 0 0 0 0 0 1 1 2 0 0 0 0 0 0 0 0
..................................AGGTTTCTCTCTACCGTTCCTGTCTT............................................................................................. 26 0 5 19.20 96 34 10 12 12 4 2 3 1 4 4 0 0 3 1 3 0 0 0 0 1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0
............................GAAGTTAGGTTTCTCTCTACCGTTCCT.................................................................................................. 27 0 3 10.33 31 0 11 5 1 2 2 3 1 3 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................CGAAGTTAGGTTTCTCTCTACCGTTCCT.................................................................................................. 28 0 3 10.00 30 8 8 1 0 1 1 1 6 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................................TTAGGTTTCTCTCTACCGTTCCTGTCTT............................................................................................. 28 0 5 7.80 39 13 6 4 2 4 2 1 0 1 2 0 0 1 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................CCTGTCTTAAACACCACACGAAATAAGT......................................................................... 28 0 2 5.50 11 0 6 1 0 0 0 1 0 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................ACAGCTTTGCAAACAAGACTGAGAAA.............................................. 26 0 3 4.67 14 0 3 2 0 0 0 1 0 0 0 0 3 0 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
....................................................................................................................CAAATATACCTTTTATAACCGTAACT........... 26 0 1 4.00 4 2 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................GTTTCTCTCTACCGTTCCTGTCTT............................................................................................. 24 0 5 2.60 13 6 0 1 1 0 0 0 0 0 0 0 1 1 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................AAACACCACACGAAATAAGTAACAGCT.................................................................. 27 0 2 2.50 5 2 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................ACCACACGAAATAAGTAACAGCT.................................................................. 23 0 2 2.00 4 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................CCAATTATACCTTTTATAACCGTAACT........... 27 1 1 2.00 2 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................AAGTTAGGTTTCTCTCTACCGTTCCT.................................................................................................. 26 0 3 2.00 6 1 0 0 0 0 0 0 3 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................ACCAATTATACCTTTTATAACCGTAACT........... 28 1 1 2.00 2 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................TCCTGTCTTAAACACCACACGAAATAAGT......................................................................... 29 0 2 2.00 4 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................CTAGGTTTCTCTCTACCGTTCCTGTCTT............................................................................................. 28 1 5 1.60 8 6 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................CACCACACGAAATAAGTAACAGCT.................................................................. 24 0 2 1.50 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................TAAACACCACACGAAATAAGTAACAGCT.................................................................. 28 0 2 1.50 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TTTCTCTCTACCGTTCCTGTCTT............................................................................................. 23 0 5 1.40 7 4 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................TAGGTTTCTCTCTACCGTTCCTGTCT.............................................................................................. 26 0 5 1.40 7 3 0 0 1 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................CAGCTTTGCAAACAAGACTGAGAAA.............................................. 25 0 3 1.33 4 0 2 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................ACAGCTTTGCAAACAAGACTGAGAAAA............................................. 27 0 3 1.33 4 0 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................GGTTTCTCTCTACCGTTCCTGTCT.............................................................................................. 24 0 5 1.00 5 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................GTATTCGACATCGAAGTTAGGTTTCTC.............................................................................................................. 27 0 2 1.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............CGTATTCGACATCGAAGTTAGGTTTCTC.............................................................................................................. 28 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................AATATACCTTTTATAACCGTAACT........... 24 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................AAACACCACACGAAATAAGT......................................................................... 20 0 2 1.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............TTCGTATTCGACATCGAAGTTAGGTTTCT............................................................................................................... 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................TTGCAAACAAGACTGAGAAAAACAA......................................... 25 0 2 1.00 2 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............CGTATTCGACATCGAAGTTAGGTT.................................................................................................................. 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............CGTATTCGACATCGAAGTTAGGTTT................................................................................................................. 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................CCACACGAAATAAGTAACAGCT.................................................................. 22 0 2 1.00 2 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................GAGAAAAACAACAACCAAATATACCTTTT....................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................TCTTAAACACCACACGAAATAAGT......................................................................... 24 0 2 1.00 2 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............TCGTATTCGACATCGAAGTTAGGTTT................................................................................................................. 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................AGTTAGGTTTCTCTCTACCGTTCCT.................................................................................................. 25 0 5 1.00 5 1 1 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.......................................................GTCTTAAACACCACACGAAATAAGT......................................................................... 25 0 2 1.00 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................CCAAATATACCTTTTATAACCGTAACT........... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................ACACCACACGAAATAAGT......................................................................... 18 0 2 1.00 2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................CTGTCTTAAACACCACACGAAATAAGT......................................................................... 27 0 2 1.00 2 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................ACACCACACGAAATAAGTAACAGC................................................................... 24 0 2 1.00 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................TTGCAAACAAGACTGAGAAAAACA.......................................... 24 0 2 1.00 2 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................ATAGGTTTCTCTCTACCGTTCCTGTCTT............................................................................................. 28 1 5 0.80 4 0 1 0 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................AGGTTTCTCTCTACCGTTCCTGTCT.............................................................................................. 25 0 5 0.80 4 2 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................AGCTTTGCAAACAAGACTGAGAAA.............................................. 24 0 3 0.67 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................TAACAGCTTTGCAAACAAGACTGAGAAA.............................................. 28 0 3 0.67 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................TTGCAAACAAGACTGAGAAA.............................................. 20 0 3 0.67 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................CAGCTTTGCAAACAAGACTGAGAAAA............................................. 26 0 3 0.67 2 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................CGAAGTTAGGTTTCTCTCTACCGT...................................................................................................... 24 0 3 0.67 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................GAAGTTAGGTTTCTCTCTACCGTTCC................................................................................................... 26 0 3 0.67 2 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................AGCTTTGCAAACAAGACTGAGAAAA............................................. 25 0 3 0.67 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................CGAAGTTAGGTTTCTCTCTACCGTTCC................................................................................................... 27 0 3 0.67 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................AGTTAGGTTTCTCTCTACCGTTCCTG................................................................................................. 26 0 5 0.60 3 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
................................TTAGGTTTCTCTCTACCGTTCCTGTCT.............................................................................................. 27 0 5 0.60 3 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.................................................................CCACACGAAATAAGTAACAGCTTTG............................................................... 25 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................CCGTTCCTGTCTTAAACACCACACGAAAT............................................................................. 29 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................AGACTGAGAAAAACAACAA...................................... 19 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................TTTGCAAACAAGACTGAGAAAAACA.......................................... 25 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................CCAAACACCACACGAAATAAGTAACAGCT.................................................................. 29 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................AACACCACACGAAATAAGTAACAGCT.................................................................. 26 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................TTAAACACCACACGAAATAAGT......................................................................... 22 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CAAGACTGAGAAAAACAACAAC..................................... 22 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................AGACTGAGAAAAACAACAACCAATTAT.............................. 27 1 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................CTCGAAGTTAGGTTTCTCTCTACCGTT..................................................................................................... 27 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...................TTCGACATCGAAGTTAGGTTTCTCT............................................................................................................. 25 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................CCTGTCTTAAACACCACACGAAATAAG.......................................................................... 27 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................ACAAGACTGAGAAAAACAACAACCAAT................................. 27 1 4 0.50 2 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................ACCACACGAAATAAGTAACAGC................................................................... 22 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................ATCGAAGTTAGGTTTCTCTCTACCGTT..................................................................................................... 27 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................CGACATCGAAGTTAGGTTTCTCTCTAC......................................................................................................... 27 0 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................AGCTTTGCAAACAAGACTGAGAAAAA............................................ 26 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................TGTCTTAAACACCACGCGAAATAAGT......................................................................... 26 1 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................ACATCGAAGTTAGGTTTCTCTCTACCGT...................................................................................................... 28 0 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................TTTGCAAACAAGACTGAGAAAAACAA......................................... 26 0 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................TCGAAGTTAGGTTTCTCTCTACCGTT..................................................................................................... 26 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................AACATCGAAGTTAGGTTTCTC.............................................................................................................. 21 1 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................CACCACACGAAATAAGTAACAGC................................................................... 23 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................TTGCAAACAAGACTGAGAAAAACAACAG...................................... 28 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................TTGCAAACAAGACTGAGAAAAACAACA....................................... 27 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................TCGAAGTTAGGTTTCTCTCT........................................................................................................... 20 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................AGGTTTCTCTCTACCGTTCCTGTC............................................................................................... 24 0 5 0.40 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................TCTCTCTACCGTTCCTGTCTT............................................................................................. 21 0 5 0.40 2 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................TAAGTAACAGCTTTGCAAACAAGACT.................................................... 26 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................TCTACCGTTCCTGTCTTAAACACC...................................................................................... 24 0 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................GAAGTTAGGTTTCTCTCTACCGCTCCT.................................................................................................. 27 1 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................GAAGTTAGGTTTCTCTCTACCGTTC.................................................................................................... 25 0 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................CCTGTCTTAAACACCAAACGAAATAAGT......................................................................... 28 1 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................CACACGAAATAAGTAACAGCTTTGCA............................................................. 26 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................GAAGTTAGGTTTCTCTCTACC........................................................................................................ 21 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................GACGTTAGCTTTCTCTCTACCGTTCCT.................................................................................................. 27 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................CTACCGTTCCTGTCTTAAACACCAC.................................................................................... 25 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................AAGTAACAGCTTTGCAAACAAGACT.................................................... 25 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................ACAGCTTTGCAAACAAGACGGAGAAA.............................................. 26 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...................................................................................AGCTTTGCAAACAAGACTGAGAA............................................... 23 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................CGAAGTTAGGTTTCTCTCTCTCGTTCCT.................................................................................................. 28 2 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................TAACAGCTTTGCAAACAAGACTGAGAA............................................... 27 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................GAGAAAAACAACAACCAATTATACCTTTT....................... 29 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................TAAGTAACAGCTTTGCATACAAGACT.................................................... 26 1 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................CGCTTTGCAAACAAGACTGAGAAA.............................................. 24 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................CCGAAGTTAGGTTTCTCTCTACCGTTCCT.................................................................................................. 29 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................ACTGAGAAAAACAACAAC..................................... 18 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................GTAACAGCTTTGCAAACAAGACTGAGAA............................................... 28 0 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................AGAGCTTTGCAAACAAGACTGAGAAA.............................................. 26 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................CACACGAAATAAGTAACAGCTT................................................................. 22 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................CGAAGTTAGGTTTCTCTCTACCGTT..................................................................................................... 25 0 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................ACCGCTTTGCAAACAAGACTGAGAAA.............................................. 26 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................ACAGCTTTGCAAACAAGACTGAGAA............................................... 25 0 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................TCTCTCTACCGTTCCTGTCTTAAACA........................................................................................ 26 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................GCAAACAAGACTGAGAAA.............................................. 18 0 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................TAGGTTTCTCTCTACCGTTGCTGTCTT............................................................................................. 27 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................TAGGTTTCTCTCTACCGTTCTTGTCTT............................................................................................. 27 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................GGTTTCTCTCTCCCGTTCCTGTCTT............................................................................................. 25 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................TAGTTTTCTCTCTACCGTTCCTGTCTT............................................................................................. 27 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................GTTTCTCTCTACCGTTCCTGTCTTA............................................................................................ 25 0 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................GTTAGGTTTCTCTCTACCGTTCCT.................................................................................................. 24 0 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................GGTTTCTCTCTACTGTTCCTGTCTT............................................................................................. 25 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................TAGGTTCCTCTCTACCGTTCCTGTCTT............................................................................................. 27 1 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................AGGTTTCTCTCTACCGTTCCTGTCTTC............................................................................................ 27 1 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................AGTTAGGTTTCTCTCTGCCGTTCCTG................................................................................................. 26 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................CCTTTCTCTCTACCGTTCCTGTCT.............................................................................................. 24 2 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................TTAGGTTTCTCTCTACCGTTCCTTT................................................................................................ 25 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................GTTTCTCTCTACCGTTCCTGTCTTT............................................................................................ 25 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................GGTTTCTCTCTACCGTTCCTGTCTG............................................................................................. 25 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................TATAGGTTTCTCTCTACCGTTCCT.................................................................................................. 24 2 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................TTCTCTCTACCGTTCCTGTCTT............................................................................................. 22 0 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................GGTTTCCCTCTACCGTTCCTGTCTT............................................................................................. 25 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TTTCTCTCTACCGTTCCTG................................................................................................. 19 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................GGTTTCTCTCTACCGTTCCTGTATT............................................................................................. 25 1 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................GGTTTCTCTCTACCGTTCC................................................................................................... 19 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................GGTTTCTCTCTACCGTTCGTGTCTT............................................................................................. 25 1 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................TCTCTCTACCGTTCCCGTCTTA............................................................................................ 22 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................GGTTTCTCTCTACCGTTCCTGTCTTA............................................................................................ 26 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................TAGGTTTCTCTCTACCGTTCCTGTCTTC............................................................................................ 28 1 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................GTTTTCTCTCTACCGTTCCTGT................................................................................................ 22 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................GTTTTCTCTCTCCCGTTCCTGT................................................................................................ 22 2 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................CGGTTTCTCTCTACCGTTCCTGTCTT............................................................................................. 26 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................TATGTTTCTCTCTACCGTTCCTGTCTT............................................................................................. 27 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................AGGTTTCTCTCTACCGTTCCTGTTTTC............................................................................................ 27 2 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................GTAGGTTTCTCTCTACCGTTCCTGTCTT............................................................................................. 28 1 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................TAGGTTTCTCTCTACCGTTCCTATCTT............................................................................................. 27 1 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................AGGTTTCTCTCTACCGTTCCTGTCGT............................................................................................. 26 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................GTTTTCTCTCTACCGTTCCTGTCTT............................................................................................. 25 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................CAGGTTTCTCTCTACCGTTCCTGTCTT............................................................................................. 27 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................TTAGGTTTCTCTCTACCGTTCCTGTCTTC............................................................................................ 29 1 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................GGTTCCTCTCTACCGTTCCTGTCTT............................................................................................. 25 1 5 0.20 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................TTAGGTTTCTCTCTACCGTTCCTTTCTT............................................................................................. 28 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................TTAAACTCCACACGAAATT............................................................................ 19 2 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................AAAAACAACAACCAATTAT.............................. 19 1 13 0.08 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12100:221945-222097 - dvi_405 TGAAGCTAAGCTGAAGCATAAGCTGTAGCTTCAATCCAAAGAGAGATGGCAAGGACAGAATTTGTGGTGTGCTTTATTCATTGTCGAAACGTTTGTTCTGACTCTTTTTGTTGTTGGTTTATATGGAAAATATTGGCATTGAATTTTTGGCAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TGAAGCTAAGCTGAAGCATAAGCTGTAGCTTCAATCCAAAGAGAGATGGCAAGGACAGAATTTGTGGTGTGCTTTATTCATTGTCGAAACGTTTGTTCTGACTCTTTTTGTTGTTGGTTTATATGGAAAATATTGGCATTGAATTTTTGGCATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................................AAGGACAGAATTTGTGGTGTGC.................................................................................22412.2549001001530100130000000008203221100210603000000000000000000002010
.............................................................................TCATTGTCGAAACGTTTGTTCTGA....................................................2434.6714001000001000010000000001240111000000001000000000000000000000000
.............................................................................TCATTGTCGAAACGTTTGTTCTGAC...................................................2533.6711007000000000000000000000001100000020000000000000000000000000000
.............................................................................TCATTGTCGAAACGTTTGTTCTG.....................................................2333.009003010000000000000000000000110000000002000000000000000000000010
......................................................................GCTTTATTCATTGTCGAAACGTTTG..........................................................2532.678000000000000000000000001103000002000010000000000000000000000000
..................................................AAGGACAGAATTTGTGGTGTG..................................................................................2152.6013001030000100000000000000013101000000000100000000000000000000010
..................................................AAGGACAGAATTTGTGGTGTGCTTTA.............................................................................2622.505001000000000000000000000001100100000001000000000000000000000000
.............................................................................TCATTGTCGAAACGTTTGTTCTGACT..................................................2632.337101000000000000000000000020100000020000000000000000000000000000
..................................................AAGGACAGAATTTGTGGTGTGCTTT..............................................................................2532.337001011000000000000000000010200000010000000000000000000000000000
..................................................AAGGACAGAATTTGTGGTGTGCTTTAT............................................................................2722.004000000000000000000000000011200000000000000000000000000000000000
............................................................................TTCATTGTCGAAACGTTTGTTCTGA....................................................2531.675000000000000000000000000020300000000000000000000000000000000000
..................................................AAGGACAGAATTTGTGGTGT...................................................................................2061.509001000010000000000000003000101100000000100000000000000000000000
.............................................................................TCATTGTCGAAACGTTTGTTCTGACTC.................................................2731.334012000000000000000000000010000000000000000000000000000000000000
.............................................ATGGCAAGGACAGAATTTGTGGT.....................................................................................2331.334000010000000000000001000001000000000010000000000000000000000000
.............................................ATGGCAAGGACAGAATTTGTGGTGTGC.................................................................................2731.334001010000000000000000000001000000000100000000000000000000000000
..................................................AAGGACAGAATTTGTGGTGTGCTT...............................................................................2431.334100010000000000000000000000100000000000100000000000000000000000
......................................................................GCTTTATTCATTGTCGAAACGTTT...........................................................2431.334000000000000000000000000001030000000000000000000000000000000000
.............................................ATGGCAAGGACAGAATTTGTGG......................................................................................2231.334000010000000000000000001000010000100000000000000000000000000000
.............................................ATGGCAAGGACAGAATTTGTGGTGT...................................................................................2531.334000000000000200000000000001000000000001000000000000000000000000
..................................................AAGGACAGAATTTGTGGTG....................................................................................1961.177001000020000000000000000000111000000000100000000000000000000000
......TAAGCTGAAGCATAAGCTGTAGCTTCAA.......................................................................................................................2811.001000000000000000000000000001000000000000000000000000000000000000
.....................................................................................................................TTTATATGGAAAATATTGGCATTGAATC........2811.001001000000000000000000000000000000000000000000000000000000000000
..................................................AAGGACAGAATTTGTGGTGTGCT................................................................................2331.003000000000000000000001000000001000000100000000000000000000000000
......TAAGCTGAAGCATAAGCTGTAGC............................................................................................................................2311.001000000000000000000000000010000000000000000000000000000000000000
.............................................ATGGCAAGGACAGAATTTGTG.......................................................................................2130.672000000000000000000000000101000000000000000000000000000000000000
......................................................................GCTTTATTCATTGTCGAAACGTTTGT.........................................................2630.672000000000000000000000000002000000000000000000000000000000000000
.............................................ATGGCAAGGACAGAATTTGTGGTG....................................................................................2430.672000001100000000000000000000000000000000000000000000000000000000
...........................................................................ATTCATTGTCGAAACGTTTGTTCTGA....................................................2630.672000000000000000000000000000010000100000000000000000000000000000
.............................................ATGGCAAGGACAGAATTTGTGGTTC...................................................................................2530.672000001000000000000000000000001000000000000000000000000000000000
.............................................................................................TGTTCTGACTCTTTTTGTTGT.......................................2120.501000000100000000000000000000000000000000000000000000000000000000
..................................................AAGGACAGAATTTGTGGTGTGCTTTATC...........................................................................2820.501001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................TTGGCATTGAATTTTTGG...1820.501000000000000000000000000000010000000000000000000000000000000000
.........................TAGCTTCAATCCAAAGAGAGATGGC.......................................................................................................2520.501000000000000000000001000000000000000000000000000000000000000000
..................................TCCAAAGAGAGATGGCAAGGACAGAAT............................................................................................2750.402100000000000000000000000000000000000010000000000000000000000000
..............................TCAATCCAAAGAGAGATGGCAAGG...................................................................................................2450.402001000000000000000000000000010000000000000000000000000000000000
..................................................................GTGTGCTTTATTCATTGTCGAAACGTT............................................................2730.331000000000001000000000000000000000000000000000000000000000000000
.....................................................................TGCTTTATTCATTGTCGAAACGTTT...........................................................2530.331000000000000000000000000000010000000000000000000000000000000000
..................................................AAGGACAGAATTTGTGGTGTGCTTA..............................................................................2530.331000000000000000000000000001000000000000000000000000000000000000
...................................................................TGTGCTTTATTCATTGTCGAAACGTTTG..........................................................2830.331000000000000000000000000001000000000000000000000000000000000000
......................................................................GCTTTATTCATTGTCGAA.................................................................1830.331000000000000000000000000001000000000000000000000000000000000000
...............................................................................ATTGTCGAAACGTTTGTTCTGACTCT................................................2630.331000000000000000000000000000000000010000000000000000000000000000
......................................................................GCTTTATTCATTGTCGAAACGTTTGTT........................................................2730.331000000000000000000000000001000000000000000000000000000000000000
...................................................................................TCGAAACGTTTGTTCTGACTCTTT..............................................2430.331000010000000000000000000000000000000000000000000000000000000000
..................................................................GTGTGCTTTATTCATTGTCGAAACGT.............................................................2630.331000000000000000000000000001000000000000000000000000000000000000
.............................................ATGGCAAGGACAGAATTTGTGGTGTG..................................................................................2630.331000000000000000000000000010000000000000000000000000000000000000
...............................................................................ATTGTCGAAACGTTTGTTCTGAA...................................................2330.331000000000000000000000000000000000000100000000000000000000000000
.............................................................................TCATTGTCGAAACGTTTGTTCTGACC..................................................2630.331100000000000000000000000000000000000000000000000000000000000000
......................................................................GCTTTATTCATTGTCGAAACGT.............................................................2230.331000000000000000000000000000010000000000000000000000000000000000
..............................................................................CATTGTCGAAACGTTTGTTCTGAC...................................................2430.331000000000000000000000000000010000000000000000000000000000000000
......................................................................GCTTTATTCATTGTCGAAACGTT............................................................2330.331000000000000000000000000000000000100000000000000000000000000000
............................................................................TTCATTGTCGAAACGTTTGTTCTGAC...................................................2630.331000000000000000000000001000000000000000000000000000000000000000
.............................................ATGGCAAGGACAGAATTTGTGGTGTC..................................................................................2630.331000000000000000000001000000000000000000000000000000000000000000
......................................................................GCTTTATTCATTGTCGAAACG..............................................................2130.331000000000000000000000000001000000000000000000000000000000000000
..........................................GAGATGGCAAGGACAGAATTTGTGGT.....................................................................................2630.331000000000000000000000000010000000000000000000000000000000000000
......................................................................GCTTTATTCATTGTCGAAA................................................................1930.331000000000000000000000000000000000000010000000000000000000000000
.................................................CAAGGACAGAATTTGTGGTGTGC.................................................................................2330.331000000000000000000000000000100000000000000000000000000000000000
......................................................................GCTTTATTCATTGTCGAAACGTTTGTG........................................................2730.331000000000000000000000000001000000000000000000000000000000000000
.............................TTCAATCCAAAGAGAGATGGC.......................................................................................................2130.331000010000000000000000000000000000000000000000000000000000000000
..................................................AAGGACAGAATTTGTGGTGTGCC................................................................................2340.251000010000000000000000000000000000000000000000000000000000000000
........................................GAGAGATGGCAAGGACAGAATTTGT........................................................................................2540.251000000000000000000000000000000000000001000000000000000000000000
.......................................AGAGAGATGGCAAGGACAGAATTTGT........................................................................................2640.251000000001000000000000000000000000000000000000000000000000000000
..................................................AAGGACAGAATTTGTGGTGTGCTTCCC............................................................................2750.201000000000000000000000000100000000000000000000000000000000000000
....................................CAAAGAGAGATGGCAAGGACAGA..............................................................................................2350.201000000000000000000000000000010000000000000000000000000000000000
....................................CAAAGAGAGATGGCAAGGACAGAATA...........................................................................................2650.201000000000000000000000000000000001000000000000000000000000000000
..............................TCAATCCAAAGAGAGATGGCAAGGACA................................................................................................2750.201000001000000000000000000000000000000000000000000000000000000000
..................................TCCAAAGAGAGATGGCAAGGACAG...............................................................................................2450.201000000000000000000000000010000000000000000000000000000000000000
....................................CAAAGAGAGATGGCAAGGACAGAAT............................................................................................2550.201000000000000000000000000001000000000000000000000000000000000000
..................................................AAGGACAGAATTTGTGGTGTC..................................................................................2160.171000000000000000000000000000000000000000100000000000000000000000
..................................................AAGGACAGAATTTGTGGTC....................................................................................19140.071000000001000000000000000000000000000000000000000000000000000000
.................................................CAAGGACAGAATTTGTGG......................................................................................18140.071000000000000000000000000000001000000000000000000000000000000000
..................................................AAGGACAGAATTTGTGGT.....................................................................................18140.071000000000000010000000000000000000000000000000000000000000000000
..................................................AAGGACAGAATTTGTGGTTAA..................................................................................21200.051000000000000000000000000010000000000000000000000000000000000000

Generated: 05/15/2015 at 06:15 PM